MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-11-14 10:24:48 PST
Job id & description: 2191, PA Uricase
Query type: protein
Count queries & homologs: 1, 45
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
pauricase978097CompleteK11900COG3517ProteobacteriaEscherichia99.3390.2455.06
pauricase975826CompleteK11900COG3517ProteobacteriaEscherichia99.3390.2455.73
pauricase977400CompleteK11900COG3517Proteobacteriaunknown97.9989.0255.81
pauricase966585CompleteK11900COG3517ProteobacteriaEscherichia99.3389.8854.83
pauricase978100CompleteK11900COG3517ProteobacteriaEscherichia99.3390.2454.83
pauricase978071CompleteK11900COG3517ProteobacteriaEscherichia98.4389.4355.33
pauricase977191CompleteK11900COG3517ProteobacteriaEscherichia99.3390.2454.61
pauricase978094CompleteK11900COG3517ProteobacteriaEscherichia99.5590.4554.71
pauricase966741CompleteK11900COG3517ProteobacteriaEscherichia99.3389.8854.16
pauricase961042CompleteK11900COG3517unknownunknown98.8889.752.48
pauricase939214CompleteK11900COG3517unknownunknown98.6688.7853.72
pauricase957031CompleteK11900COG3517unknownunknown98.4389.1152.04
pauricase942190CompleteK11900COG3517ProteobacteriaEnterobacter98.8889.1850.56
pauricase916087CompleteK11900COG3517ProteobacteriaEscherichia98.8888.4952.24
pauricase943033CompleteK11900COG3517ProteobacteriaEnterobacter98.8889.1850.56
pauricase943173CompleteK11900COG3517ProteobacteriaEnterobacter98.8889.1850.56
pauricase942426CompleteK11900COG3517ProteobacteriaEnterobacter98.8889.1850.56
pauricase1754423Lack 5'-endK11900COG3517unknownunknown85.4698.9754.69
pauricase868834CompleteK11900COG3517Proteobacteriaunknown96.6483.6942.82
pauricase886959CompleteK11900COG3517ProteobacteriaEnterobacter97.3284.9342.76
pauricase872455CompleteK11900COG3517ProteobacteriaKlebsiella98.4385.4142.27
pauricase871257CompleteK11900COG3517ProteobacteriaEscherichia97.3284.4442.76
pauricase877968CompleteK11900COG3517ProteobacteriaEnterobacter97.3284.642.53
pauricase868792CompleteK11900COG3517ProteobacteriaEnterobacter97.3284.2742.53
pauricase827517CompleteK11900COG3517ProteobacteriaHaemophilus95.0881.3344.29
pauricase879432CompleteK11900COG3517unknownunknown98.2185.5542.37
pauricase876732CompleteK11900COG3517ProteobacteriaEnterobacter97.3284.642.07
pauricase964992CompleteK11900COG3517ProteobacteriaHaemophilus95.0886.4443.36
pauricase966724CompleteK11900COG3517ProteobacteriaHaemophilus95.0886.4442.89
pauricase882401CompleteK11900COG3517ProteobacteriaKlebsiella96.6484.1842.13
pauricase864581CompleteK11900COG3517ProteobacteriaKlebsiella98.4385.0841.82
pauricase869066CompleteK11900COG3517ProteobacteriaEscherichia97.3284.4441.84
pauricase870017CompleteK11900COG3517ProteobacteriaEscherichia97.3284.4441.84
pauricase981515CompleteK11900COG3517ProteobacteriaDesulfovibrio96.6488.5944.85
pauricase864569CompleteK11900COG3517ProteobacteriaKlebsiella97.3284.1141.38
pauricase978648CompleteK11900COG3517ProteobacteriaEscherichia94.8585.9542.45
pauricase918646Lack 3'-endK11900COG3517Proteobacteriaunknown95.7584.5540.89
pauricase941909CompleteK11900COG3517ProteobacteriaProvidencia94.8585.3741.59
pauricase941415CompleteK11900COG3517ProteobacteriaProteus94.8585.3741.59
pauricase962869CompleteK11900COG3517ProteobacteriaEscherichia95.386.6443.26
pauricase958843CompleteK11900COG3517unknownunknown95.9786.8741.34
pauricase972853CompleteK11900COG3517ProteobacteriaEscherichia97.5488.2441.72
pauricase1014029CompleteK11900COG3517ProteobacteriaCitrobacter89.9382.6841.54
pauricase1030610CompleteK11900COG3517ProteobacteriaCampylobacter98.4391.4938.96
pauricase1219717Lack 5'-endK11900COG3517unknownunknown94.8594.2541.82
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
classGammaproteobacteria0.8780.00.0
orderEnterobacteriales0.8470.00.0
familyEnterobacteriaceae0.8470.00.0
genusEscherichia0.7780.00.0
speciesEscherichia_coli0.7540.00.0
phylumProteobacteria0.6933.87e-2683.04e-266
genusKlebsiella0.5731.18e-1637.96e-162
speciesKlebsiella_pneumoniae0.5514.14e-1492.44e-147
speciesEscherichia_unclassified0.4988.84e-1184.64e-116
genusEnterobacter0.4212.93e-811.38e-79
speciesEnterobacter_cloacae0.4185.24e-802.25e-78
genusPantoea0.4091.62e-765.88e-75
speciesPantoea_unclassified0.4091.62e-765.88e-75
familyFusobacteriaceae0.3379.57e-513.23e-49
genusFusobacterium0.3353.6e-501.13e-48
phylumFusobacteria0.3322.34e-496.14e-48
classFusobacteriia0.3322.34e-496.14e-48
orderFusobacteriales0.3322.34e-496.14e-48
speciesSubdoligranulum_unclassified-0.3261.74e-474.32e-46
genusSubdoligranulum-0.328.43e-461.99e-44
speciesRuminococcus_gnavus0.316.36e-431.43e-41
speciesLachnospiraceae_bacterium_7_1_58FAA-0.3042.29e-414.91e-40
genusCitrobacter0.3027.5e-411.54e-39
speciesEubacterium_siraeum-0.2997.33e-401.44e-38
speciesCitrobacter_unclassified0.2965.05e-399.53e-38
speciesCitrobacter_freundii0.2956.8e-391.23e-37
speciesClostridium_nexile0.2933.02e-385.28e-37
speciesKlebsiella_oxytoca0.2852.09e-363.52e-35
speciesVeillonella_parvula0.2799.56e-351.56e-33
genusVeillonella0.2763.65e-345.74e-33
genusCoprobacillus0.271.36e-322.07e-31
orderPasteurellales0.2677.73e-321.11e-30
familyPasteurellaceae0.2677.73e-321.11e-30
speciesHaemophilus_parainfluenzae0.2669.58e-321.33e-30
genusHaemophilus0.2651.65e-312.23e-30
speciesClostridium_leptum-0.2643.57e-314.68e-30
genusMegasphaera0.2611.66e-302.12e-29
speciesMegasphaera_micronuciformis0.2593.93e-304.87e-29
speciesCoprobacillus_unclassified0.2594.02e-304.87e-29
genusPseudoflavonifractor-0.2553.38e-293.89e-28
speciesPseudoflavonifractor_capillosus-0.2553.38e-293.89e-28
genusCoprococcus-0.253.86e-284.34e-27
speciesAnaerotruncus_unclassified-0.2496.72e-287.38e-27
speciesClostridium_ramosum0.2471.73e-271.86e-26
speciesVeillonella_unclassified0.2431.4e-261.47e-25
genusWeissella0.2431.52e-261.56e-25
speciesClostridium_bolteae0.2414.19e-264.21e-25
familyRuminococcaceae-0.2414.87e-264.79e-25
speciesClostridium_perfringens0.245.58e-265.38e-25
speciesKlebsiella_unclassified0.246.34e-265.98e-25
speciesWeissella_confusa0.2299.33e-248.63e-23
speciesFusobacterium_nucleatum0.2291.08e-239.8e-23
genusBarnesiella-0.2255.54e-234.84e-22
speciesBarnesiella_intestinihominis-0.2255.54e-234.84e-22
speciesClostridium_hathewayi0.2256.23e-235.35e-22
genusButyrivibrio-0.2256.86e-235.78e-22
classClostridia-0.2231.78e-221.45e-21
orderClostridiales-0.2231.78e-221.45e-21
speciesFusobacterium_ulcerans0.2222.86e-222.29e-21
speciesEubacterium_ramulus-0.2214.75e-223.74e-21
speciesCoprococcus_comes-0.2191.17e-219.05e-21
speciesVeillonella_dispar0.2181.23e-219.36e-21
speciesEubacterium_hallii-0.2171.88e-211.41e-20
speciesLactobacillus_salivarius0.2172.51e-211.85e-20
speciesDorea_longicatena-0.2172.82e-212.05e-20
speciesBifidobacterium_adolescentis-0.2154.46e-213.19e-20
genusActinobacillus0.2121.64e-201.14e-19
speciesActinobacillus_unclassified0.2121.64e-201.14e-19
speciesStreptococcus_anginosus0.2113.57e-202.44e-19
genusEnterococcus0.213.96e-202.67e-19
genusEubacterium-0.2097.05e-204.66e-19
familyEubacteriaceae-0.2097.11e-204.66e-19
familyEnterococcaceae0.2089.36e-206.05e-19
speciesClostridium_symbiosum0.2071.64e-191.05e-18
speciesLachnospiraceae_bacterium_3_1_46FAA-0.2062.04e-191.28e-18
genusDorea-0.2053.61e-192.24e-18
speciesBacteroides_fragilis0.2054.12e-192.53e-18
orderLactobacillales0.2044.28e-192.59e-18
speciesEubacterium_rectale-0.2045.41e-193.23e-18
classBacilli0.2046.24e-193.68e-18
familyOscillospiraceae-0.2011.56e-188.98e-18
genusOscillibacter-0.2011.56e-188.98e-18
familyBacteroidales_noname-0.1985.4e-183e-17
genusBacteroidales_noname-0.1985.4e-183e-17
speciesBacteroidales_bacterium_ph8-0.1985.4e-183e-17
speciesOscillibacter_unclassified-0.1977e-183.84e-17
genusAggregatibacter0.1951.94e-171.05e-16
speciesFusobacterium_mortiferum0.1942.5e-171.34e-16
speciesWeissella_cibaria0.1942.61e-171.38e-16
speciesCoprococcus_catus-0.1943.05e-171.6e-16
speciesVeillonella_atypica0.1934.31e-172.24e-16
speciesRoseburia_hominis-0.191.06e-165.44e-16
genusRuminococcaceae_noname-0.191.12e-165.56e-16
speciesRuminococcaceae_bacterium_D16-0.191.12e-165.56e-16
familyRikenellaceae-0.191.13e-165.56e-16
genusAlistipes-0.191.13e-165.56e-16
familyLeuconostocaceae0.191.29e-166.28e-16
speciesLactococcus_garvieae0.1882.68e-161.29e-15
speciesBacteroides_uniformis-0.1873.14e-161.5e-15
speciesEnterobacter_aerogenes0.1873.3e-161.56e-15
genusAnaerotruncus-0.1873.43e-161.6e-15
speciesEnterococcus_faecalis0.1873.81e-161.76e-15
speciesSutterella_wadsworthensis-0.1873.95e-161.81e-15
speciesCollinsella_aerofaciens-0.1865.02e-162.28e-15
speciesLactobacillus_mucosae0.1865.69e-162.56e-15
speciesButyrivibrio_unclassified-0.1856.25e-162.78e-15
speciesFusobacterium_varium0.1857.53e-163.32e-15
speciesStreptococcus_mitis_oralis_pneumoniae0.1858.56e-163.74e-15
genusCoprobacter-0.1841.11e-154.76e-15
speciesCoprobacter_fastidiosus-0.1841.11e-154.76e-15
familyClostridiaceae0.1841.12e-154.76e-15
speciesMitsuokella_unclassified-0.1813.04e-151.28e-14
genusClostridium0.1813.65e-151.52e-14
speciesPrevotella_buccae0.184.78e-151.98e-14
phylumVerrucomicrobia-0.1771.19e-144.68e-14
classVerrucomicrobiae-0.1771.19e-144.68e-14
orderVerrucomicrobiales-0.1771.19e-144.68e-14
familyVerrucomicrobiaceae-0.1771.19e-144.68e-14
genusAkkermansia-0.1771.19e-144.68e-14
speciesAkkermansia_muciniphila-0.1771.19e-144.68e-14
genusCollinsella-0.1771.47e-145.73e-14
familyBacillales_noname0.1761.56e-145.99e-14
genusGemella0.1761.56e-145.99e-14
speciesStreptococcus_thermophilus-0.1743.71e-141.41e-13
speciesAlistipes_shahii-0.1743.92e-141.48e-13
genusSutterella-0.1744.06e-141.52e-13
speciesCampylobacter_concisus0.1744.14e-141.54e-13
speciesAlistipes_senegalensis-0.1734.41e-141.63e-13
speciesAlistipes_putredinis-0.1718.33e-143.05e-13
genusMitsuokella-0.1711.12e-134.07e-13
speciesAnaerostipes_hadrus-0.171.35e-134.86e-13
genusCampylobacter0.1691.95e-136.97e-13
speciesDorea_formicigenerans-0.1682.91e-131.03e-12
familyCampylobacteraceae0.1673.3e-131.16e-12
speciesMegamonas_unclassified0.1673.45e-131.21e-12
genusMegamonas0.1673.99e-131.38e-12
speciesStreptococcus_salivarius0.1674.05e-131.4e-12
speciesRuminococcus_sp_5_1_39BFAA-0.1665.68e-131.94e-12
speciesStreptococcus_infantarius0.1656.72e-132.28e-12
classEpsilonproteobacteria0.1657.7e-132.58e-12
orderCampylobacterales0.1657.7e-132.58e-12
genusAdlercreutzia-0.1631.26e-124.16e-12
speciesAdlercreutzia_equolifaciens-0.1631.26e-124.16e-12
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1631.34e-124.39e-12
speciesClostridiales_bacterium_1_7_47FAA0.1631.37e-124.46e-12
speciesAggregatibacter_segnis0.1631.44e-124.66e-12
speciesBifidobacterium_dentium0.1631.53e-124.91e-12
speciesEggerthella_unclassified0.1612.5e-127.97e-12
phylumFirmicutes-0.1612.56e-128.11e-12
speciesCoprococcus_sp_ART55_1-0.1586.5e-122.05e-11
genusOdoribacter-0.1561.33e-114.16e-11
familyStreptococcaceae0.1561.36e-114.22e-11
speciesStreptococcus_australis0.1542.12e-116.54e-11
speciesHaemophilus_sputorum0.1542.31e-117.08e-11
speciesBacteroides_stercoris0.1523.72e-111.13e-10
speciesMegasphaera_unclassified0.1515.94e-111.8e-10
orderBacillales0.156.89e-112.07e-10
genusFlavonifractor0.1498.33e-112.47e-10
speciesFlavonifractor_plautii0.1498.33e-112.47e-10
speciesBacteroides_plebeius0.1498.68e-112.56e-10
speciesC2likevirus_unclassified-0.1499.56e-112.8e-10
genusEggerthella0.1499.82e-112.86e-10
speciesOdoribacter_splanchnicus-0.1491.08e-103.13e-10
genusRuminococcus-0.1471.58e-104.55e-10
speciesClostridium_citroniae0.1471.77e-105.06e-10
genusPeptostreptococcus0.1471.87e-105.32e-10
genusStreptococcus0.1461.97e-105.57e-10
genusLactobacillus0.1462.1e-105.9e-10
genusC2likevirus-0.1462.16e-106.03e-10
familyLactobacillaceae0.1462.19e-106.08e-10
genusPrevotella0.1453.4e-109.38e-10
phylumSynergistetes0.1443.69e-109.95e-10
classSynergistia0.1443.69e-109.95e-10
orderSynergistales0.1443.69e-109.95e-10
familySynergistaceae0.1443.69e-109.95e-10
speciesHaemophilus_paraphrohaemolyticus0.1444.41e-101.18e-09
genusMorganella0.1434.77e-101.26e-09
speciesMorganella_morganii0.1434.77e-101.26e-09
genusSolobacterium0.1427.36e-101.93e-09
speciesSolobacterium_moorei0.1427.36e-101.93e-09
speciesRuminococcus_obeum-0.1418.34e-102.17e-09
familyPeptostreptococcaceae0.1418.71e-102.26e-09
speciesMethanobrevibacter_smithii-0.1419.34e-102.41e-09
genusPyramidobacter0.141.1e-092.81e-09
speciesPyramidobacter_piscolens0.141.1e-092.81e-09
speciesLachnospiraceae_bacterium_6_1_63FAA0.141.28e-093.25e-09
orderCoriobacteriales-0.1382.36e-095.93e-09
familyCoriobacteriaceae-0.1382.36e-095.93e-09
speciesEnterococcus_faecium0.1372.46e-096.14e-09
genusMethanobrevibacter-0.1372.96e-097.35e-09
speciesKlebsiella_sp_MS_92_30.1363.86e-099.54e-09
speciesBifidobacterium_pseudocatenulatum0.1345.96e-091.47e-08
speciesAnaerostipes_unclassified0.1346.16e-091.51e-08
speciesStreptococcus_gordonii0.1346.62e-091.59e-08
classMethanobacteria-0.1346.63e-091.59e-08
orderMethanobacteriales-0.1346.63e-091.59e-08
familyMethanobacteriaceae-0.1346.63e-091.59e-08
phylumEuryarchaeota-0.1346.76e-091.61e-08
speciesBlautia_hydrogenotrophica-0.1337.38e-091.75e-08
speciesRothia_mucilaginosa0.1337.53e-091.78e-08
speciesAlistipes_onderdonkii-0.1321.15e-082.7e-08
speciesPrevotella_copri0.1311.25e-082.92e-08
speciesStreptococcus_lutetiensis0.131.5e-083.49e-08
genusProteus0.131.58e-083.66e-08
speciesPeptostreptococcus_stomatis0.1282.53e-085.83e-08
speciesLachnospiraceae_bacterium_8_1_57FAA-0.1282.62e-086e-08
speciesAlistipes_indistinctus-0.1273.38e-087.71e-08
familyVeillonellaceae0.1264.76e-081.08e-07
familyMyoviridae0.1264.78e-081.08e-07
speciesBacteroides_thetaiotaomicron0.1256e-081.35e-07
speciesProteus_mirabilis0.1248.08e-081.81e-07
genusClostridiales_noname0.1239.69e-082.16e-07
speciesEubacterium_ventriosum-0.1221.24e-072.75e-07
genusPeptostreptococcaceae_noname0.1211.53e-073.37e-07
speciesPrevotella_stercorea0.1211.55e-073.4e-07
familyMicrococcaceae0.121.86e-074.06e-07
genusRothia0.122.04e-074.44e-07
speciesLactobacillus_fermentum0.1192.53e-075.48e-07
speciesStreptococcus_vestibularis0.1192.6e-075.6e-07
speciesLeuconostoc_lactis0.1173.68e-077.9e-07
familyPorphyromonadaceae-0.1139.19e-071.96e-06
speciesButyrivibrio_crossotus-0.1131.01e-062.15e-06
speciesClostridium_clostridioforme0.1121.13e-062.39e-06
genusFaecalibacterium-0.1111.39e-062.92e-06
speciesFaecalibacterium_prausnitzii-0.1111.39e-062.92e-06
speciesLachnospiraceae_bacterium_2_1_58FAA0.1111.61e-063.36e-06
speciesParaprevotella_unclassified-0.1092.37e-064.93e-06
speciesRuminococcus_lactaris-0.1092.51e-065.2e-06
genusParaprevotella-0.1082.73e-065.63e-06
speciesErysipelotrichaceae_bacterium_21_3-0.1082.9e-065.95e-06
speciesGemella_morbillorum0.1073.6e-067.36e-06
familySiphoviridae-0.1064.24e-068.63e-06
speciesAlistipes_finegoldii-0.1055.06e-061.03e-05
speciesClostridium_bartlettii0.1055.22e-061.05e-05
speciesStreptococcus_sanguinis0.1055.75e-061.15e-05
speciesOscillibacter_sp_KLE_1745-0.1046.61e-061.32e-05
speciesLachnospiraceae_bacterium_2_1_46FAA0.1046.99e-061.39e-05
orderActinomycetales0.1047.02e-061.39e-05
speciesStreptococcus_pasteurianus0.1038.29e-061.64e-05
speciesBacteroides_coprocola0.1028.96e-061.76e-05
speciesMegamonas_rupellensis0.1029.04e-061.77e-05
speciesLactobacillus_vaginalis0.1011.16e-052.26e-05
speciesParaprevotella_xylaniphila-0.1011.19e-052.31e-05
familyPropionibacteriaceae-0.1011.3e-052.51e-05
genusAnaerostipes-0.11.58e-053.04e-05
speciesLactobacillus_sanfranciscensis0.0982.18e-054.18e-05
speciesEubacterium_biforme-0.0962.93e-055.6e-05
familyClostridiales_Family_XI_Incertae_Sedis0.0963.44e-056.55e-05
familyLachnospiraceae-0.0953.66e-056.94e-05
speciesLactobacillus_crispatus0.0953.95e-057.46e-05
speciesRuminococcus_champanellensis-0.0954.04e-057.6e-05
speciesAcidaminococcus_intestini0.0954.09e-057.66e-05
familyActinomycetaceae0.0944.43e-058.26e-05
speciesParaprevotella_clara-0.0944.65e-058.64e-05
speciesMegamonas_hypermegale0.0944.88e-059.03e-05
speciesPropionibacterium_freudenreichii-0.0944.95e-059.13e-05
speciesOlsenella_unclassified-0.0935.72e-050.000105
speciesRuminococcus_bromii-0.0926.84e-050.000125
genusBlautia0.0917.59e-050.000138
speciesParabacteroides_merdae-0.0918.09e-050.000147
speciesBacteroides_intestinalis0.0918.55e-050.000155
genusActinomyces0.099.18e-050.000165
speciesBacteroides_nordii0.099.46e-050.00017
speciesLactobacillus_oris0.099.98e-050.000178
speciesEnterobacteria_phage_HK5440.090.0001040.000185
speciesMethanobrevibacter_unclassified-0.090.0001060.000188
speciesLactobacillus_amylovorus0.0890.000110.000194
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0890.000120.000211
speciesBifidobacterium_catenulatum-0.0880.0001440.000253
phylumActinobacteria-0.0870.0001540.000268
classActinobacteria-0.0870.0001540.000268
speciesOdoribacter_unclassified-0.0870.0001550.000269
speciesAcidaminococcus_fermentans0.0860.0001830.000316
speciesMegasphaera_elsdenii0.0860.0001980.000341
familySutterellaceae-0.0840.0002910.000499
genusBifidobacterium-0.0830.0003160.00054
familyClostridiales_noname0.0820.0003570.000608
speciesAlistipes_sp_AP11-0.0820.0003590.00061
speciesBifidobacterium_animalis-0.0820.0003970.000671
genusAcidaminococcaceae_unclassified-0.0820.0003980.000671
genusPropionibacterium-0.0820.0004050.00068
speciesDesulfovibrio_piger-0.0810.0004310.000721
speciesLactobacillus_acidophilus-0.080.0004970.000829
speciesBacteroides_xylanisolvens0.080.0005040.000838
speciesClostridium_sp_L2_50-0.080.0005130.00085
speciesRoseburia_unclassified-0.080.0005230.000863
speciesCoprobacillus_sp_D60.080.000550.000905
orderBifidobacteriales-0.080.0005550.000906
familyBifidobacteriaceae-0.080.0005550.000906
speciesMegamonas_funiformis0.0790.0006150.001
speciesCoprococcus_eutactus-0.0790.0006440.00104
speciesParabacteroides_goldsteinii0.0780.0006940.00112
speciesLactobacillus_plantarum0.0770.0008250.00133
speciesStreptococcus_mutans0.0760.0010.00161
speciesPorphyromonas_uenonis0.0760.001010.00162
genusLambdalikevirus0.0750.001090.00174
genusOlsenella-0.0750.001160.00184
genusParvimonas0.0750.001190.00188
speciesParvimonas_unclassified0.0750.001190.00188
speciesEubacterium_limosum0.0750.001260.00198
speciesAlistipes_sp_HGB5-0.0740.001290.00202
speciesBacteroides_finegoldii0.0740.001330.00208
genusPhascolarctobacterium-0.0740.001360.00211
speciesPhascolarctobacterium_succinatutens-0.0740.001360.00211
speciesParabacteroides_sp_D13-0.0740.001410.00218
genusCatenibacterium-0.0730.001510.00232
speciesCatenibacterium_mitsuokai-0.0730.001510.00232
orderBurkholderiales-0.0730.001530.00234
speciesLactobacillus_gasseri0.0730.001560.00238
speciesLactococcus_phage_P680-0.0720.001710.0026
speciesOscillibacter_sp_KLE_1728-0.0720.001750.00266
speciesHoldemania_filiformis-0.0720.00180.00272
speciesBifidobacterium_longum-0.0720.001890.00285
classNegativicutes0.0710.002120.00318
orderSelenomonadales0.0710.002120.00318
speciesAlistipes_unclassified-0.0710.002210.0033
speciesBifidobacterium_breve0.070.002390.00356
genusPeptoniphilus0.070.002430.00361
speciesBacteroides_oleiciplenus0.070.002580.00382
familyBacteroidaceae0.070.002630.00387
genusBacteroides0.070.002630.00387
speciesBacteroides_salyersiae0.0690.002640.00387
speciesEubacterium_eligens-0.0690.002840.00415
speciesBlautia_producta0.0680.003150.00459
genusMyoviridae_noname0.0660.004040.00585
speciesAcidaminococcus_unclassified-0.0660.004040.00585
speciesLachnospiraceae_bacterium_1_4_56FAA0.0660.004430.00639
speciesBacteroides_sp_2_1_22-0.0650.004650.00669
classBetaproteobacteria-0.0640.005450.00782
genusLeuconostoc0.0630.006340.00907
speciesRoseburia_intestinalis-0.0620.007030.01
familyAcidaminococcaceae-0.0610.008230.0117
speciesBacteroides_sp_3_1_190.0610.008520.0121
genusHoldemania-0.060.009590.0136
speciesEubacterium_cylindroides-0.0590.01030.0145
genusSiphoviridae_noname-0.0590.01070.015
genusDialister-0.0580.01170.0164
speciesBacteroides_dorei-0.0580.0120.0168
speciesSutterella_parvirubra0.0570.01390.0194
speciesBacteroides_pectinophilus-0.0570.01430.0199
genusGordonibacter-0.0570.01440.0199
speciesGordonibacter_pamelaeae-0.0570.01440.0199
speciesCollinsella_tanakaei0.0560.01580.0217
speciesLachnospiraceae_bacterium_5_1_57FAA0.0550.01760.0241
speciesClostridium_sp_ATCC_BAA_4420.0550.01790.0245
genusPorphyromonas0.0540.01910.0261
speciesBacteroides_coprophilus0.0540.01920.0261
speciesBifidobacterium_angulatum-0.0540.01990.027
speciesHoldemania_unclassified-0.0530.02150.0291
speciesStreptococcus_parasanguinis0.0520.02360.0318
genusTunalikevirus0.0520.02380.032
orderCaudovirales-0.0520.02470.0331
speciesDialister_invisus-0.050.02920.039
genusParabacteroides-0.050.02940.0392
orderAeromonadales0.0490.03330.0443
speciesCoprobacillus_sp_29_10.0480.03630.0481
familyOxalobacteraceae-0.0480.03690.0488
genusOxalobacter-0.0480.03880.051
speciesOxalobacter_formigenes-0.0480.03880.051
speciesClostridium_spiroforme-0.0480.0390.0511
speciesLachnospiraceae_bacterium_1_1_57FAA0.0470.04280.056
speciesBacteroides_salanitronis-0.0460.04510.0588
speciesBacteroides_cellulosilyticus-0.0460.04710.0612
genusDesulfovibrio-0.0460.04890.0634
speciesPorphyromonas_asaccharolytica0.0450.04970.0643
genusRoseburia-0.0450.05130.0662
speciesKlebsiella_phage_KP360.0450.05290.068
speciesPrevotella_bivia0.0450.05350.0686
speciesBacteroides_sp_1_1_6-0.0390.09290.119
speciesEggerthella_lenta0.0390.09460.121
speciesBilophila_unclassified0.0380.1010.128
speciesErysipelotrichaceae_bacterium_2_2_44A0.0380.1040.132
familyPrevotellaceae0.0370.1050.133
speciesDesulfovibrio_desulfuricans-0.0370.1050.133
speciesBacteroides_barnesiae-0.0370.1060.133
genusBilophila0.0370.1080.135
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0370.1080.135
speciesParabacteroides_unclassified0.0360.1150.144
speciesClostridium_sp_KLE_1755-0.0360.1170.146
phylumViruses_noname-0.0360.120.149
classViruses_noname-0.0360.120.149
speciesLactococcus_phage_jm2-0.0360.1240.153
speciesLactobacillus_reuteri0.0340.1410.174
speciesLactobacillus_casei_paracasei-0.0330.1540.189
speciesEggerthella_sp_1_3_56FAA-0.0330.1570.192
speciesTuricibacter_unclassified-0.0320.1650.202
speciesSlackia_piriformis-0.0320.170.207
genusAcidaminococcus0.0310.1780.217
speciesLactococcus_phage_936_sensu_lato-0.0310.180.218
speciesBacteroides_eggerthii0.0310.1810.219
speciesPeptostreptococcus_anaerobius0.0310.1830.22
speciesBacteroides_sp_4_3_47FAA0.0310.1830.22
speciesRuminococcus_torques-0.030.1930.232
speciesBilophila_wadsworthia0.030.1950.234
genusMethanosphaera-0.0290.2080.248
speciesMethanosphaera_stadtmanae-0.0290.2080.248
speciesCoriobacteriaceae_bacterium_phI-0.0290.2130.253
genusBurkholderiales_noname0.0290.2160.256
speciesBurkholderiales_bacterium_1_1_470.0290.2160.256
speciesHoldemania_sp_AP20.0280.2250.264
speciesAnaerotruncus_colihominis0.0280.2250.264
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0280.2250.264
genusButyricicoccus0.0270.2450.286
speciesButyricicoccus_pullicaecorum0.0270.2450.286
genusSutterellaceae_unclassified-0.0270.2510.292
genusParasutterella0.0270.2520.292
speciesParasutterella_excrementihominis0.0270.2520.292
genusLactococcus0.0260.260.301
speciesClostridium_asparagiforme0.0260.2630.304
genusTuricibacter-0.0260.2650.305
familyBurkholderiales_noname0.0250.2750.316
speciesLactococcus_lactis-0.0240.2930.336
genusCoriobacteriaceae_noname-0.0240.2970.339
speciesRoseburia_inulinivorans-0.0240.3020.344
speciesErysipelotrichaceae_bacterium_3_1_530.0240.3090.351
speciesLactococcus_phage_phi7-0.0230.310.352
classErysipelotrichia0.0230.3140.354
orderErysipelotrichales0.0230.3140.354
familyErysipelotrichaceae0.0230.3140.354
speciesEubacterium_dolichum0.0230.3310.372
speciesRuminococcus_callidus-0.0220.3470.389
speciesLactococcus_phage_bIL67-0.0220.3510.393
speciesParabacteroides_sp_20_3-0.0210.3760.42
speciesBacteroides_massiliensis0.0190.4050.45
speciesBacteroides_ovatus0.0190.4050.45
speciesMitsuokella_multacida-0.0190.410.454
genusButyricimonas-0.0190.4120.454
speciesButyricimonas_synergistica-0.0190.4120.454
speciesLactobacillus_delbrueckii-0.0190.4130.454
speciesEubacterium_sp_3_1_31-0.0190.420.46
speciesParabacteroides_johnsonii0.0190.420.46
speciesLactobacillus_rhamnosus-0.0180.4260.465
speciesBacteroides_vulgatus-0.0180.4490.489
genusClostridiaceae_noname0.0170.4560.495
speciesClostridiaceae_bacterium_JC1180.0170.4560.495
speciesBacteroides_caccae0.0170.4620.499
genusLachnospiraceae_noname-0.0170.4640.499
classDeltaproteobacteria0.0170.4650.499
orderDesulfovibrionales0.0170.4650.499
familyDesulfovibrionaceae0.0170.4650.499
speciesStreptococcus_phage_Sfi210.0160.4980.533
speciesBifidobacterium_bifidum-0.0160.50.534
speciesLactobacillus_ruminis-0.0150.5130.547
speciesParabacteroides_distasonis0.0150.5230.556
familyViruses_noname0.0130.5610.594
genusViruses_noname0.0130.5610.594
familyPodoviridae0.0120.5910.624
speciesRuminococcus_sp_JC3040.0120.5990.631
speciesDialister_succinatiphilus-0.0120.6160.648
speciesCollinsella_intestinalis0.0110.6260.657
speciesOdoribacter_laneus0.0110.6430.673
orderPseudomonadales0.0110.6470.676
genusStaphylococcus-0.010.6620.69
orderViruses_noname-0.0090.6820.709
familySuccinivibrionaceae-0.0090.7110.738
genusSuccinatimonas-0.0080.7330.757
speciesSuccinatimonas_hippei-0.0080.7330.757
speciesErysipelotrichaceae_bacterium_6_1_45-0.0080.7360.758
speciesTuricibacter_sanguinis0.0070.7720.794
phylumBacteroidetes-0.0050.8270.845
classBacteroidia-0.0050.8270.845
orderBacteroidales-0.0050.8270.845
genusErysipelotrichaceae_noname-0.0040.8570.874
speciesBacteroides_fluxus0.0040.8610.876
speciesCollinsella_unclassified0.0040.8650.878
genusSlackia-0.0030.8860.897
speciesSubdoligranulum_sp_4_3_54A2FAA0.0030.8910.901
familyStaphylococcaceae0.0020.9250.933
speciesBacteroides_faecis0.0020.9290.935
speciesBacteroides_clarus-0.0020.9470.95
speciesPeptostreptococcaceae_noname_unclassified0.0010.9480.95
speciesDorea_unclassified0.00.9930.993
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesDenmark752770.01192760700840.003551427105238.66326900706e-116262.05199
Liver cirrhosisChina1201140.02572639848830.007730665756941.45881146276e-0721787.31634
Crohns diseaseSpain17660.04085633681170.004313429733560.00278724984247570718.9759
Type II diabetesChina1831850.03252425219650.01729248738180.0365917455378616920.3873
Colorectal cancerAustria64350.06284613943650.01319787781790.116834991859565219.123
Ulcerative colitisSpain78660.003181818190210.004313429733560.164738247476952531.4211
ObesityDenmark1691230.004910309921380.00409172438940.6262305632342224173.1347
Rheumatoid arthritisChina127980.01822215094640.01552404019740.8948323542022755491.8865
Type II diabetesSweden53920.01042265500830.009438983332010.9345352391382778294.0806
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382