MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-11-21 03:35:06 PST
Job id & description: 2204, cbeg12-3 NAS
Query type: protein
Count queries & homologs: 1, 5
Min % identity & max e-value: 90%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
Cbeg12-32174446Lack 5'-endunknownCOG3176BacteroidetesBacteroides100.093.6898.47
Cbeg12-32452804CompleteunknownCOG3176BacteroidetesBacteroides100.0100.098.16
Cbeg12-32443254CompleteunknownCOG3176Bacteroidetesunknown100.0100.095.09
Cbeg12-32442086CompleteunknownCOG3176Bacteroidetesunknown100.0100.094.48
Cbeg12-32452075CompleteunknownCOG3176Bacteroidetesunknown100.0100.094.48
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyBacteroidaceae0.7640.00.0
genusBacteroides0.7640.00.0
speciesBacteroides_vulgatus0.5981.3e-1812.05e-179
phylumBacteroidetes0.5686.38e-1605.03e-158
classBacteroidia0.5686.4e-1605.03e-158
orderBacteroidales0.5686.4e-1605.03e-158
phylumFirmicutes-0.4641.79e-1001.21e-98
speciesBacteroides_ovatus0.4642.21e-1001.3e-98
genusParabacteroides0.4485.56e-932.92e-91
speciesBacteroides_thetaiotaomicron0.4346.65e-873.14e-85
orderCoriobacteriales-0.4262.44e-839.6e-82
familyCoriobacteriaceae-0.4262.44e-839.6e-82
phylumActinobacteria-0.411.36e-764.59e-75
classActinobacteria-0.411.36e-764.59e-75
classClostridia-0.4071.73e-755.1e-74
orderClostridiales-0.4071.73e-755.1e-74
speciesCoprococcus_catus-0.4041.6e-744.44e-73
genusDorea-0.3958.7e-712.28e-69
genusCoprococcus-0.3883.68e-689.14e-67
speciesDorea_longicatena-0.3853.1e-677.32e-66
familyRuminococcaceae-0.3854.18e-679.4e-66
speciesRuminococcus_obeum-0.3847.46e-671.6e-65
speciesCollinsella_aerofaciens-0.3824.87e-669.99e-65
genusCollinsella-0.3731.02e-622.01e-61
familyPorphyromonadaceae0.3627.82e-591.48e-57
speciesBacteroides_xylanisolvens0.3619.71e-591.76e-57
speciesBacteroides_uniformis0.3415.16e-529.02e-51
genusSubdoligranulum-0.348.8e-521.48e-50
speciesSubdoligranulum_unclassified-0.341.07e-511.74e-50
speciesBifidobacterium_adolescentis-0.3361.14e-501.79e-49
speciesCoprococcus_comes-0.3361.29e-501.96e-49
classMethanobacteria-0.3331.27e-491.76e-48
orderMethanobacteriales-0.3331.27e-491.76e-48
familyMethanobacteriaceae-0.3331.27e-491.76e-48
classErysipelotrichia-0.3316.01e-497.67e-48
orderErysipelotrichales-0.3316.01e-497.67e-48
familyErysipelotrichaceae-0.3316.01e-497.67e-48
genusMethanobrevibacter-0.339.37e-491.16e-47
orderBifidobacteriales-0.3292.34e-482.76e-47
familyBifidobacteriaceae-0.3292.34e-482.76e-47
speciesMethanobrevibacter_smithii-0.3292.51e-482.89e-47
genusBifidobacterium-0.3277.04e-487.91e-47
speciesEubacterium_hallii-0.3271.04e-471.14e-46
speciesDorea_formicigenerans-0.3221.69e-461.81e-45
genusErysipelotrichaceae_noname-0.321.21e-451.27e-44
phylumEuryarchaeota-0.3183.02e-453.1e-44
genusOlsenella-0.3091.38e-421.39e-41
speciesEubacterium_biforme-0.3051.93e-411.9e-40
speciesOlsenella_unclassified-0.3028.56e-418.25e-40
genusFlavonifractor0.2997.89e-407.3e-39
speciesFlavonifractor_plautii0.2997.89e-407.3e-39
familyActinomycetaceae-0.291.39e-371.26e-36
speciesClostridium_bolteae0.2892.55e-372.27e-36
genusActinomyces-0.2885.91e-375.17e-36
genusRuminococcus-0.2837.2e-366.18e-35
speciesBacteroides_stercoris0.2718.9e-337.5e-32
speciesEubacterium_siraeum-0.271.19e-329.85e-32
familyLachnospiraceae-0.2683.14e-322.56e-31
speciesBacteroides_massiliensis0.2661.28e-311.02e-30
speciesRuminococcus_gnavus0.2661.3e-311.02e-30
orderActinomycetales-0.2644.05e-313.13e-30
speciesClostridiales_bacterium_1_7_47FAA0.262.72e-302.07e-29
orderLactobacillales-0.262.93e-302.2e-29
classBacilli-0.2571.19e-298.78e-29
speciesEubacterium_ramulus-0.2539.39e-296.82e-28
speciesClostridium_citroniae0.2521.72e-281.23e-27
classBetaproteobacteria0.2512.87e-282.02e-27
orderBurkholderiales0.253.94e-282.73e-27
genusAdlercreutzia-0.254.89e-283.3e-27
speciesAdlercreutzia_equolifaciens-0.254.89e-283.3e-27
phylumFusobacteria0.2481.41e-279.12e-27
classFusobacteriia0.2481.41e-279.12e-27
orderFusobacteriales0.2481.41e-279.12e-27
familyFusobacteriaceae0.2462.87e-271.83e-26
genusFusobacterium0.2431.44e-269.06e-26
speciesBifidobacterium_longum-0.246.27e-263.89e-25
speciesClostridium_symbiosum0.2373.3e-252.01e-24
speciesBacteroides_dorei0.2373.32e-252.01e-24
speciesBacteroides_fragilis0.2365.06e-253.02e-24
speciesAnaerostipes_hadrus-0.2341.13e-246.67e-24
speciesParabacteroides_distasonis0.2322.31e-241.35e-23
speciesMethanobrevibacter_unclassified-0.2313.63e-242.09e-23
phylumVerrucomicrobia-0.236.86e-243.68e-23
classVerrucomicrobiae-0.236.86e-243.68e-23
orderVerrucomicrobiales-0.236.86e-243.68e-23
familyVerrucomicrobiaceae-0.236.86e-243.68e-23
genusAkkermansia-0.236.86e-243.68e-23
speciesAkkermansia_muciniphila-0.236.86e-243.68e-23
genusCatenibacterium-0.2291.21e-236.35e-23
speciesCatenibacterium_mitsuokai-0.2291.21e-236.35e-23
speciesRuminococcus_sp_5_1_39BFAA-0.2281.49e-237.73e-23
speciesStreptococcus_thermophilus-0.2256.78e-233.48e-22
familyLactobacillaceae-0.2241.04e-225.28e-22
familySutterellaceae0.2241.32e-226.63e-22
genusLactobacillus-0.2231.86e-229.24e-22
familyStreptococcaceae-0.2172.49e-211.22e-20
genusStreptococcus-0.2071.48e-197.2e-19
speciesBilophila_unclassified0.1985.28e-182.54e-17
genusBilophila0.1977.12e-183.39e-17
familyClostridiales_noname0.1961.22e-175.76e-17
genusAnaerostipes-0.1961.4e-176.54e-17
familyEubacteriaceae-0.1942.5e-171.16e-16
genusEubacterium-0.1942.78e-171.27e-16
familyBurkholderiales_noname0.1942.89e-171.31e-16
genusBurkholderiales_noname0.1934.12e-171.83e-16
speciesBurkholderiales_bacterium_1_1_470.1934.12e-171.83e-16
speciesFusobacterium_ulcerans0.1926.27e-172.77e-16
speciesAnaerotruncus_unclassified-0.1916.72e-172.94e-16
speciesClostridium_nexile0.191.23e-165.28e-16
speciesRuminococcus_bromii-0.191.23e-165.28e-16
speciesStreptococcus_parasanguinis-0.1891.6e-166.8e-16
speciesBacteroides_nordii0.1891.64e-166.91e-16
genusMitsuokella-0.1882.05e-168.56e-16
speciesClostridium_leptum-0.1882.71e-161.12e-15
speciesErysipelotrichaceae_bacterium_21_3-0.1874.22e-161.73e-15
speciesMitsuokella_unclassified-0.1864.68e-161.9e-15
speciesStreptococcus_sanguinis-0.1849.08e-163.66e-15
speciesFusobacterium_mortiferum0.1831.35e-155.4e-15
genusButyrivibrio-0.1831.68e-156.66e-15
speciesClostridium_asparagiforme0.1821.84e-157.24e-15
speciesCoprococcus_sp_ART55_1-0.1822.05e-158e-15
speciesStreptococcus_salivarius-0.1822.24e-158.67e-15
genusParasutterella0.1822.36e-158.98e-15
speciesParasutterella_excrementihominis0.1822.36e-158.98e-15
speciesBacteroides_caccae0.1813.24e-151.22e-14
speciesFusobacterium_varium0.184.37e-151.64e-14
speciesParabacteroides_unclassified0.1795.74e-152.13e-14
genusMethanosphaera-0.1795.93e-152.17e-14
speciesMethanosphaera_stadtmanae-0.1795.93e-152.17e-14
speciesButyrivibrio_crossotus-0.1788.81e-153.2e-14
genusClostridiales_noname0.1771.17e-144.22e-14
genusPhascolarctobacterium-0.1761.97e-146.99e-14
speciesPhascolarctobacterium_succinatutens-0.1761.97e-146.99e-14
familyPrevotellaceae-0.1727.31e-142.57e-13
speciesClostridium_sp_L2_50-0.1727.54e-142.64e-13
familyPeptostreptococcaceae-0.1691.84e-136.39e-13
speciesPrevotella_copri-0.1682.36e-138.13e-13
familyMicrococcaceae-0.1682.71e-139.24e-13
speciesClostridium_hathewayi0.1682.72e-139.24e-13
genusRothia-0.1682.87e-139.68e-13
phylumProteobacteria0.1673.82e-131.28e-12
genusPeptostreptococcaceae_noname-0.1664.55e-131.51e-12
genusLeuconostoc-0.1664.79e-131.58e-12
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1665.69e-131.87e-12
speciesPropionibacterium_freudenreichii-0.1656.45e-132.1e-12
speciesBilophila_wadsworthia0.1631.35e-124.36e-12
speciesLactobacillus_rhamnosus-0.1631.54e-124.94e-12
speciesLachnospiraceae_bacterium_6_1_63FAA0.1621.89e-126.03e-12
genusPropionibacterium-0.163.59e-121.14e-11
familyBacillales_noname-0.163.94e-121.23e-11
genusGemella-0.163.94e-121.23e-11
speciesCoprococcus_eutactus-0.1594.32e-121.34e-11
genusGordonibacter-0.1594.9e-121.5e-11
speciesGordonibacter_pamelaeae-0.1594.9e-121.5e-11
speciesStreptococcus_mutans-0.1595.41e-121.64e-11
speciesAlistipes_senegalensis-0.1595.41e-121.64e-11
speciesClostridium_clostridioforme0.1577.5e-122.25e-11
genusHaemophilus0.1578.22e-122.46e-11
speciesHaemophilus_parainfluenzae0.1578.31e-122.47e-11
speciesBifidobacterium_animalis-0.1579.62e-122.84e-11
speciesMitsuokella_multacida-0.1561.03e-113.02e-11
orderBacillales-0.1561.08e-113.15e-11
orderPasteurellales0.1551.38e-113.97e-11
familyPasteurellaceae0.1551.38e-113.97e-11
genusClostridiaceae_noname0.1551.59e-114.52e-11
speciesClostridiaceae_bacterium_JC1180.1551.59e-114.52e-11
speciesRothia_mucilaginosa-0.1551.85e-115.23e-11
speciesLachnospiraceae_bacterium_2_1_46FAA0.1532.97e-118.34e-11
speciesBifidobacterium_catenulatum-0.1524.2e-111.17e-10
genusLactococcus-0.1524.41e-111.22e-10
genusSolobacterium-0.1515.25e-111.44e-10
speciesSolobacterium_moorei-0.1515.25e-111.44e-10
speciesRuminococcus_callidus-0.157.55e-112.06e-10
speciesRuminococcus_champanellensis-0.1499.23e-112.5e-10
classDeltaproteobacteria0.1481.41e-103.76e-10
orderDesulfovibrionales0.1481.41e-103.76e-10
familyDesulfovibrionaceae0.1481.41e-103.76e-10
genusPseudoflavonifractor-0.1471.51e-103.98e-10
speciesPseudoflavonifractor_capillosus-0.1471.51e-103.98e-10
speciesParaprevotella_unclassified-0.1471.94e-105.09e-10
speciesEubacterium_rectale-0.1462.54e-106.62e-10
genusParaprevotella-0.1443.54e-109.18e-10
speciesStreptococcus_gordonii-0.1444.09e-101.05e-09
speciesStreptococcus_anginosus-0.1444.09e-101.05e-09
genusPrevotella-0.1434.58e-101.17e-09
speciesBacteroides_sp_2_1_220.1435.46e-101.39e-09
speciesBifidobacterium_dentium-0.141.16e-092.93e-09
speciesOdoribacter_splanchnicus0.141.28e-093.21e-09
genusBlautia-0.141.34e-093.35e-09
speciesLactobacillus_casei_paracasei-0.1391.49e-093.68e-09
speciesLactococcus_phage_P680-0.1391.49e-093.68e-09
familyEnterococcaceae-0.1391.5e-093.69e-09
familyRikenellaceae0.1391.6e-093.89e-09
genusAlistipes0.1391.6e-093.89e-09
speciesLachnospiraceae_bacterium_2_1_58FAA0.1391.63e-093.95e-09
genusEnterococcus-0.1382.06e-094.96e-09
speciesBacteroides_cellulosilyticus0.1382.33e-095.58e-09
speciesStreptococcus_vestibularis-0.1372.78e-096.63e-09
familyOscillospiraceae0.1345.56e-091.31e-08
genusOscillibacter0.1345.56e-091.31e-08
genusOdoribacter0.1346.45e-091.51e-08
speciesLactobacillus_ruminis-0.1337.23e-091.69e-08
speciesDialister_succinatiphilus-0.1329.61e-092.23e-08
speciesLachnospiraceae_bacterium_5_1_63FAA-0.1311.36e-083.15e-08
speciesLachnospiraceae_bacterium_3_1_46FAA-0.131.69e-083.89e-08
speciesRuminococcus_torques-0.1292.3e-085.27e-08
speciesClostridium_bartlettii-0.1282.51e-085.72e-08
genusAnaerotruncus-0.1282.76e-086.26e-08
familyAcidaminococcaceae-0.1273.3e-087.45e-08
speciesRuminococcus_sp_JC304-0.1255.61e-081.26e-07
familyLeuconostocaceae-0.1256.43e-081.43e-07
speciesLachnospiraceae_bacterium_1_4_56FAA0.1256.44e-081.43e-07
speciesBacteroides_pectinophilus-0.1247.79e-081.73e-07
speciesParaprevotella_clara-0.1238.62e-081.9e-07
genusOxalobacter-0.1231.02e-072.23e-07
speciesOxalobacter_formigenes-0.1231.02e-072.23e-07
speciesParabacteroides_merdae0.1221.24e-072.7e-07
speciesRoseburia_hominis-0.1211.39e-073.01e-07
speciesEubacterium_dolichum0.1211.49e-073.21e-07
familyOxalobacteraceae-0.1211.56e-073.35e-07
speciesLactococcus_lactis-0.121.77e-073.78e-07
genusSiphoviridae_noname-0.121.83e-073.89e-07
speciesAnaerostipes_unclassified0.1183.16e-076.69e-07
speciesDorea_unclassified0.1173.9e-078.22e-07
speciesOscillibacter_unclassified0.1174.3e-079.02e-07
speciesEubacterium_cylindroides-0.1156.21e-071.3e-06
speciesBacteroides_salyersiae0.1147.53e-071.57e-06
speciesLactobacillus_delbrueckii-0.1121.21e-062.5e-06
speciesDesulfovibrio_piger-0.1121.28e-062.64e-06
speciesBacteroides_oleiciplenus0.111.87e-063.84e-06
speciesVeillonella_dispar0.111.97e-064.03e-06
speciesBacteroides_coprophilus-0.112.04e-064.15e-06
speciesLactobacillus_gasseri-0.1092.29e-064.64e-06
speciesAnaerotruncus_colihominis0.1092.41e-064.86e-06
speciesRuminococcus_lactaris-0.1082.66e-065.34e-06
genusTuricibacter-0.1082.88e-065.76e-06
speciesLactobacillus_plantarum-0.1082.95e-065.88e-06
speciesCoprobacillus_unclassified0.1083.08e-066.11e-06
familyPropionibacteriaceae-0.1083.15e-066.22e-06
speciesTuricibacter_sanguinis-0.1073.32e-066.53e-06
speciesPeptostreptococcaceae_noname_unclassified-0.1073.66e-067.17e-06
speciesEnterococcus_faecium-0.1054.88e-069.52e-06
speciesAlistipes_putredinis0.1046.53e-061.27e-05
speciesEubacterium_sp_3_1_310.1037.98e-061.54e-05
genusRoseburia0.1038.57e-061.65e-05
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.1038.76e-061.68e-05
speciesAcidaminococcus_fermentans-0.1011.18e-052.25e-05
genusVeillonella0.11.43e-052.72e-05
speciesParabacteroides_johnsonii0.11.54e-052.92e-05
speciesEnterococcus_faecalis-0.0991.78e-053.36e-05
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0991.88e-053.54e-05
speciesBifidobacterium_bifidum-0.0982.08e-053.9e-05
speciesParaprevotella_xylaniphila-0.0972.65e-054.94e-05
speciesEubacterium_ventriosum-0.0972.66e-054.94e-05
genusBarnesiella-0.0972.73e-055.03e-05
speciesBarnesiella_intestinihominis-0.0972.73e-055.03e-05
speciesClostridium_sp_ATCC_BAA_4420.0962.97e-055.45e-05
genusCoprobacillus0.0953.54e-056.48e-05
speciesRoseburia_inulinivorans0.0953.61e-056.58e-05
speciesTuricibacter_unclassified-0.0953.73e-056.77e-05
speciesOscillibacter_sp_KLE_17450.0944.37e-057.9e-05
speciesBacteroides_clarus0.0944.8e-058.65e-05
genusDesulfovibrio-0.0945.03e-059.03e-05
familySiphoviridae-0.0935.5e-059.83e-05
speciesBacteroides_finegoldii0.0935.53e-059.85e-05
phylumViruses_noname-0.0935.61e-059.92e-05
classViruses_noname-0.0935.61e-059.92e-05
genusParvimonas-0.0935.72e-050.000101
speciesParvimonas_unclassified-0.0935.75e-050.000101
speciesBacteroides_intestinalis0.0935.92e-050.000103
speciesOscillibacter_sp_KLE_17280.0926.46e-050.000113
genusLachnospiraceae_noname-0.0927.14e-050.000124
genusDialister-0.0918.01e-050.000138
speciesVeillonella_unclassified0.099.34e-050.000161
speciesPrevotella_buccae0.0890.0001110.00019
speciesStreptococcus_australis-0.0890.0001110.00019
speciesMegasphaera_elsdenii-0.0880.0001310.000223
speciesVeillonella_parvula0.0880.0001410.000239
familyBacteroidales_noname-0.0860.0002120.000356
genusBacteroidales_noname-0.0860.0002120.000356
speciesBacteroidales_bacterium_ph8-0.0860.0002120.000356
speciesEggerthella_unclassified0.0850.000230.000385
speciesStreptococcus_pasteurianus0.0850.0002370.000394
speciesCollinsella_intestinalis0.0850.0002370.000394
orderCaudovirales-0.0840.0002750.000455
speciesGemella_morbillorum-0.0830.0003140.000518
speciesMegasphaera_micronuciformis0.0830.0003330.000548
speciesPrevotella_bivia0.0820.0003660.0006
speciesVeillonella_atypica0.0810.0004530.00074
speciesMegamonas_rupellensis0.0790.0005950.000968
familyClostridiaceae0.0790.0006370.00103
speciesLactococcus_phage_jm2-0.0780.0006860.00111
genusClostridium0.0780.0007010.00113
familyClostridiales_Family_XI_Incertae_Sedis-0.0780.0007590.00122
speciesEggerthella_sp_1_3_56FAA-0.0770.0008610.00138
speciesLactococcus_garvieae-0.0770.0008840.00141
speciesRoseburia_unclassified-0.0760.0009370.00149
speciesKlebsiella_pneumoniae0.0760.001040.00165
speciesClostridium_ramosum0.0740.001390.00219
classNegativicutes-0.0720.001770.00278
orderSelenomonadales-0.0720.001770.00278
genusRuminococcaceae_noname-0.0720.001880.00293
speciesRuminococcaceae_bacterium_D16-0.0720.001880.00293
speciesStreptococcus_mitis_oralis_pneumoniae-0.0720.001930.003
speciesBacteroides_salanitronis-0.070.002430.00376
genusEggerthella0.0690.002780.00429
speciesSutterella_parvirubra0.0690.00280.0043
speciesPeptostreptococcus_stomatis-0.0690.002970.00455
orderPseudomonadales-0.0680.003180.00486
speciesAlistipes_onderdonkii0.0680.003190.00486
genusKlebsiella0.0670.003690.0056
speciesBifidobacterium_angulatum-0.0650.004710.00713
speciesLactobacillus_fermentum-0.0650.004970.00749
speciesLactococcus_phage_phi7-0.0640.005360.00805
genusMegamonas0.0640.005370.00805
speciesMegamonas_unclassified0.0640.005540.00827
genusFaecalibacterium-0.0640.005580.00828
speciesFaecalibacterium_prausnitzii-0.0640.005580.00828
genusSuccinatimonas-0.0620.007590.0112
speciesSuccinatimonas_hippei-0.0620.007590.0112
familySuccinivibrionaceae-0.0620.007670.0113
speciesLachnospiraceae_bacterium_5_1_57FAA0.060.009160.0134
speciesClostridium_spiroforme-0.0590.01050.0153
speciesBacteroides_sp_3_1_190.0590.01050.0153
genusActinobacillus0.0590.01080.0156
speciesActinobacillus_unclassified0.0590.01080.0156
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0590.01090.0157
speciesEggerthella_lenta-0.0580.01150.0165
genusPeptostreptococcus-0.0580.01160.0166
genusAggregatibacter0.0580.01170.0167
speciesHoldemania_sp_AP20.0580.01170.0167
speciesEubacterium_limosum-0.0580.01190.0169
genusSlackia-0.0580.01230.0174
speciesCollinsella_unclassified0.0560.0150.0212
speciesParabacteroides_goldsteinii0.0560.01520.0214
speciesErysipelotrichaceae_bacterium_6_1_45-0.0560.01590.0223
speciesLactobacillus_amylovorus-0.0560.01620.0227
genusPorphyromonas-0.0560.01630.0228
genusButyricimonas0.0550.01720.0239
speciesButyricimonas_synergistica0.0550.01720.0239
classGammaproteobacteria0.0540.01890.0262
speciesLeuconostoc_lactis-0.0520.02510.0346
speciesEnterobacteria_phage_HK5440.0520.02560.0352
speciesAlistipes_finegoldii0.0510.02620.0359
speciesSlackia_piriformis-0.0510.02730.0373
speciesBlautia_hydrogenotrophica-0.0490.03260.0445
speciesLactobacillus_acidophilus-0.0490.03510.0477
speciesPorphyromonas_asaccharolytica-0.0480.03630.0491
speciesAlistipes_shahii0.0480.03630.0491
speciesParabacteroides_sp_D13-0.0480.03790.0511
speciesOdoribacter_laneus-0.0470.04020.0541
speciesErysipelotrichaceae_bacterium_3_1_530.0470.04230.0567
speciesLactobacillus_vaginalis-0.0460.04570.0611
speciesEscherichia_coli0.0460.04770.0636
speciesHaemophilus_sputorum0.0450.04930.0655
speciesWeissella_cibaria-0.0450.04980.066
speciesCampylobacter_concisus0.0440.0570.0754
speciesBacteroides_plebeius-0.0440.05760.0759
speciesButyrivibrio_unclassified-0.0440.05890.0774
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0440.05970.0782
speciesBifidobacterium_pseudocatenulatum0.0440.05980.0782
speciesBacteroides_barnesiae-0.0430.06460.0842
speciesPrevotella_stercorea-0.0430.06520.0848
speciesHaemophilus_paraphrohaemolyticus0.0430.0660.0856
speciesFusobacterium_nucleatum0.0420.06810.0881
speciesCollinsella_tanakaei0.0420.06860.0885
genusPyramidobacter0.0410.07320.0939
speciesPyramidobacter_piscolens0.0410.07320.0939
phylumSynergistetes0.0410.07520.0954
classSynergistia0.0410.07520.0954
orderSynergistales0.0410.07520.0954
familySynergistaceae0.0410.07520.0954
speciesLactobacillus_sanfranciscensis-0.0410.07650.0968
speciesBacteroides_faecis0.0390.09020.114
speciesAlistipes_unclassified-0.0390.09060.114
speciesLactobacillus_reuteri-0.0390.09280.116
genusEscherichia0.0380.1010.126
speciesBifidobacterium_breve-0.0370.1050.131
genusMorganella0.0370.1120.139
speciesMorganella_morganii0.0370.1120.139
speciesAggregatibacter_segnis0.0360.1180.146
genusHoldemania0.0350.1260.156
speciesLactobacillus_mucosae-0.0350.1270.157
speciesC2likevirus_unclassified-0.0350.1290.159
genusButyricicoccus0.0350.1310.16
speciesButyricicoccus_pullicaecorum0.0350.1310.16
genusAcidaminococcus-0.0350.1320.161
speciesLactobacillus_oris-0.0340.1360.165
speciesRoseburia_intestinalis0.0340.1390.169
familyPodoviridae0.0340.1440.174
genusC2likevirus-0.0340.1440.174
speciesKlebsiella_oxytoca-0.0330.150.181
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0320.160.192
speciesAlistipes_indistinctus-0.0320.1620.194
speciesEubacterium_eligens-0.0320.1660.198
genusCampylobacter0.0320.170.203
genusWeissella-0.0310.1750.208
speciesWeissella_confusa-0.0310.1780.211
speciesEscherichia_unclassified-0.0310.1820.215
orderAeromonadales-0.030.1890.223
speciesAlistipes_sp_HGB50.030.2020.238
speciesCitrobacter_unclassified0.0290.2070.243
speciesBacteroides_sp_4_3_47FAA0.0290.2130.249
familyCampylobacteraceae0.0280.2310.27
orderEnterobacteriales0.0270.2460.286
familyEnterobacteriaceae0.0270.2460.286
genusStaphylococcus-0.0270.2480.288
speciesPorphyromonas_uenonis-0.0250.2740.317
speciesBlautia_producta0.0250.280.323
speciesPeptostreptococcus_anaerobius-0.0240.290.334
speciesDialister_invisus-0.0240.2990.343
genusAcidaminococcaceae_unclassified0.0240.3020.346
orderViruses_noname-0.0240.3080.352
genusSutterellaceae_unclassified0.0230.3240.369
genusPantoea0.0230.3280.372
speciesPantoea_unclassified0.0230.3280.372
speciesSutterella_wadsworthensis-0.0220.3320.376
genusMegasphaera0.0220.3330.376
speciesDesulfovibrio_desulfuricans-0.0220.3470.391
speciesCitrobacter_freundii0.0210.3580.402
genusCitrobacter0.0210.3610.405
classEpsilonproteobacteria0.0210.3640.406
orderCampylobacterales0.0210.3640.406
speciesClostridium_perfringens0.0210.370.412
genusProteus-0.0210.3750.416
speciesLactobacillus_crispatus-0.020.3810.422
speciesAcidaminococcus_intestini0.020.3940.436
familyStaphylococcaceae-0.0190.4230.466
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0180.4360.48
speciesMegamonas_hypermegale0.0180.4390.482
speciesLactococcus_phage_bIL670.0170.470.515
genusCoprobacter-0.0170.4750.518
speciesCoprobacter_fastidiosus-0.0170.4750.518
genusTunalikevirus0.0160.4880.531
speciesBacteroides_sp_1_1_60.0160.4920.534
speciesClostridium_sp_KLE_1755-0.0150.5150.558
familyVeillonellaceae-0.0150.5270.569
genusLambdalikevirus-0.0140.5390.581
speciesMegasphaera_unclassified-0.0140.5420.581
speciesAlistipes_sp_AP11-0.0140.5420.581
speciesStreptococcus_lutetiensis0.0140.5430.581
speciesKlebsiella_phage_KP360.0140.5530.591
speciesOdoribacter_unclassified-0.0130.5620.599
speciesHoldemania_filiformis-0.0120.5930.63
speciesLachnospiraceae_bacterium_1_1_57FAA0.0110.620.658
speciesBacteroides_coprocola-0.0110.6310.667
speciesLactobacillus_salivarius-0.0110.6320.667
speciesBacteroides_eggerthii-0.0110.6430.677
genusMyoviridae_noname0.010.6560.689
speciesEnterobacter_aerogenes0.010.6570.689
speciesKlebsiella_sp_MS_92_30.0090.7050.737
speciesStreptococcus_infantarius0.0090.7060.737
speciesKlebsiella_unclassified0.0090.7110.741
speciesBacteroides_fluxus0.0080.7350.764
speciesMegamonas_funiformis-0.0080.7420.77
genusCoriobacteriaceae_noname-0.0080.7450.771
speciesStreptococcus_phage_Sfi21-0.0070.7560.781
speciesParabacteroides_sp_20_3-0.0070.7670.79
speciesCoriobacteriaceae_bacterium_phI-0.0060.7810.803
speciesProteus_mirabilis-0.0060.790.811
genusSutterella-0.0060.7990.818
genusEnterobacter-0.0060.8090.827
speciesEnterobacter_cloacae-0.0050.8140.83
speciesLactococcus_phage_936_sensu_lato-0.0050.8240.838
genusPeptoniphilus-0.0030.8860.899
speciesHoldemania_unclassified0.0030.8970.909
familyMyoviridae0.0020.9260.936
speciesCoprobacillus_sp_D60.0020.9470.955
speciesAcidaminococcus_unclassified-0.0010.9540.96
speciesCoprobacillus_sp_29_10.00.9950.996
familyViruses_noname0.00.9960.996
genusViruses_noname0.00.9960.996
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.1651120181360.06160916261236.54818286003e-066542.17456
ObesityDenmark1691230.05712667653910.04587648442080.183313221581043634.3165
Ulcerative colitisSpain78660.0533065606840.06160916261230.2083388477081092736.0461
Colorectal cancerAustria64350.01427148322180.01247620053350.319480592291298343.9268
Type II diabetesSweden53920.01711126779920.02016078716270.5119323842271643155.6417
Rheumatoid arthritisChina127980.06348978421270.06579584321290.5443692755981862562.1102
Type II diabetesChina1831850.09256300989690.103681992110.5752768429072243074.1267
Type II diabetesDenmark752770.05048241512750.05270686992150.6298896694312329076.3431
Liver cirrhosisChina1201140.1202354792630.1179149266080.916587461642861196.11
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382