MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-11-27 17:53:25 PST
Job id & description: 2236, fuso tan
Query type: protein
Count queries & homologs: 1, 2
Min % identity & max e-value: 80%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
Tannase914570CompleteunknownNOG38973FusobacteriaFusobacterium99.897.8290.89
Tannase840056CompleteunknownNOG38973FusobacteriaFusobacterium99.694.4489.66
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesFusobacterium_nucleatum0.6271.96e-2049.25e-202
speciesMegasphaera_micronuciformis0.4165.46e-791.29e-76
phylumFusobacteria0.3678.66e-618.18e-59
classFusobacteriia0.3678.66e-618.18e-59
orderFusobacteriales0.3678.66e-618.18e-59
genusFusobacterium0.3648.16e-606.42e-58
familyFusobacteriaceae0.3627.21e-594.86e-57
speciesCampylobacter_concisus0.3535.64e-563.33e-54
genusAggregatibacter0.3316.22e-493.26e-47
speciesPrevotella_buccae0.331.23e-485.81e-47
speciesAggregatibacter_segnis0.3277.87e-483.38e-46
genusCampylobacter0.3091.55e-426.1e-41
familyCampylobacteraceae0.3069.4e-423.41e-40
classEpsilonproteobacteria0.2981.44e-394.53e-38
orderCampylobacterales0.2981.44e-394.53e-38
speciesStreptococcus_mitis_oralis_pneumoniae0.2878.1e-372.39e-35
speciesVeillonella_atypica0.2861.43e-363.97e-35
speciesPeptostreptococcus_stomatis0.2772.15e-345.64e-33
genusPeptostreptococcus0.2732.69e-336.68e-32
familyBacillales_noname0.2724.37e-339.82e-32
genusGemella0.2724.37e-339.82e-32
speciesVeillonella_dispar0.2718.98e-331.93e-31
speciesStreptococcus_anginosus0.2691.88e-323.86e-31
genusActinobacillus0.2677.7e-321.45e-30
speciesActinobacillus_unclassified0.2677.7e-321.45e-30
genusVeillonella0.2635.6e-311.02e-29
speciesStreptococcus_vestibularis0.2513.33e-285.82e-27
genusMegasphaera0.254.8e-288.09e-27
speciesVeillonella_parvula0.2481.69e-272.75e-26
orderBacillales0.2441.18e-261.86e-25
speciesVeillonella_unclassified0.2431.4e-262.13e-25
speciesLactobacillus_mucosae0.2431.55e-262.29e-25
speciesLactobacillus_salivarius0.2413.65e-265.22e-25
speciesStreptococcus_gordonii0.2399.5e-261.32e-24
speciesHaemophilus_sputorum0.2349.28e-251.25e-23
speciesGemella_morbillorum0.2331.53e-242.01e-23
familyActinomycetaceae0.2214.83e-226.16e-21
speciesHaemophilus_paraphrohaemolyticus0.226.71e-228.33e-21
genusActinomyces0.227.57e-229.16e-21
speciesBifidobacterium_dentium0.2191.06e-211.25e-20
genusSolobacterium0.2162.89e-213.25e-20
speciesSolobacterium_moorei0.2162.89e-213.25e-20
classBacilli0.2147.94e-218.72e-20
familyStreptococcaceae0.2121.73e-201.86e-19
orderLactobacillales0.2121.8e-201.89e-19
genusStreptococcus0.2122.35e-202.41e-19
orderPasteurellales0.2096.28e-206.18e-19
familyPasteurellaceae0.2096.28e-206.18e-19
speciesStreptococcus_sanguinis0.2096.99e-206.73e-19
speciesRuminococcus_gnavus0.2071.79e-191.69e-18
genusHaemophilus0.2062.06e-191.91e-18
speciesHaemophilus_parainfluenzae0.2053.04e-192.76e-18
familyClostridiales_Family_XI_Incertae_Sedis0.2053.86e-193.44e-18
speciesClostridium_perfringens0.1993.48e-183.04e-17
orderActinomycetales0.1977.01e-186.02e-17
classGammaproteobacteria0.1961.32e-171.11e-16
genusParvimonas0.1918.56e-177.05e-16
speciesParvimonas_unclassified0.1918.66e-177.05e-16
genusSubdoligranulum-0.1891.64e-161.31e-15
speciesSubdoligranulum_unclassified-0.1873.54e-162.78e-15
genusLactobacillus0.1865.35e-164.14e-15
familyLactobacillaceae0.1831.79e-151.36e-14
familyVeillonellaceae0.1812.93e-152.19e-14
phylumProteobacteria0.1812.97e-152.19e-14
speciesStreptococcus_parasanguinis0.1752.21e-141.6e-13
speciesClostridium_nexile0.1752.26e-141.62e-13
genusRothia0.1682.91e-132.05e-12
familyMicrococcaceae0.1673.12e-132.17e-12
speciesClostridium_ramosum0.1673.31e-132.26e-12
speciesStreptococcus_mutans0.1673.73e-132.52e-12
genusMorganella0.1665.49e-133.6e-12
speciesMorganella_morganii0.1665.49e-133.6e-12
speciesStreptococcus_salivarius0.1631.15e-127.44e-12
classNegativicutes0.1631.21e-127.61e-12
orderSelenomonadales0.1631.21e-127.61e-12
speciesFusobacterium_mortiferum0.1631.29e-128.01e-12
genusKlebsiella0.1561.12e-116.87e-11
familyOscillospiraceae-0.1561.34e-118.01e-11
genusOscillibacter-0.1561.34e-118.01e-11
speciesEubacterium_ventriosum-0.1551.64e-119.68e-11
speciesStreptococcus_lutetiensis0.157.43e-114.33e-10
speciesRothia_mucilaginosa0.157.56e-114.35e-10
speciesKlebsiella_oxytoca0.157.67e-114.36e-10
genusCoprobacillus0.1498.6e-114.83e-10
speciesCoprobacillus_unclassified0.1462.22e-101.23e-09
speciesCoprococcus_catus-0.1452.96e-101.62e-09
genusCoprococcus-0.1453.02e-101.64e-09
speciesOscillibacter_unclassified-0.1443.74e-102.01e-09
speciesKlebsiella_pneumoniae0.1444.1e-102.17e-09
genusPeptoniphilus0.1444.51e-102.37e-09
speciesFusobacterium_ulcerans0.1435.07e-102.63e-09
familyEnterococcaceae0.1435.33e-102.73e-09
speciesClostridium_leptum-0.1436.02e-103.06e-09
genusEnterococcus0.1418.18e-104.11e-09
genusCitrobacter0.141.19e-095.91e-09
genusDesulfovibrio-0.1381.92e-099.44e-09
speciesLachnospiraceae_bacterium_7_1_58FAA-0.1382.3e-091.12e-08
genusProteus0.1363.2e-091.54e-08
speciesEubacterium_siraeum-0.1363.88e-091.85e-08
speciesLactobacillus_fermentum0.1354.71e-092.22e-08
familyRikenellaceae-0.1345.37e-092.48e-08
genusAlistipes-0.1345.37e-092.48e-08
speciesAlistipes_senegalensis-0.1346.04e-092.77e-08
speciesRoseburia_hominis-0.1336.98e-093.17e-08
familyEubacteriaceae-0.1338.6e-093.87e-08
genusEubacterium-0.1329.09e-094.05e-08
speciesPeptostreptococcus_anaerobius0.1329.99e-094.41e-08
familyRuminococcaceae-0.1311.43e-086.25e-08
orderEnterobacteriales0.1291.96e-088.41e-08
familyEnterobacteriaceae0.1291.96e-088.41e-08
speciesAlistipes_indistinctus-0.1282.8e-081.19e-07
genusOdoribacter-0.1282.86e-081.21e-07
speciesCitrobacter_unclassified0.1282.95e-081.23e-07
genusAnaerotruncus-0.1283.07e-081.27e-07
speciesStreptococcus_australis0.1273.31e-081.36e-07
speciesLactobacillus_vaginalis0.1273.48e-081.42e-07
speciesLactobacillus_crispatus0.1274.03e-081.63e-07
speciesClostridium_symbiosum0.1246.7e-082.68e-07
speciesPorphyromonas_uenonis0.1239.64e-083.82e-07
classDeltaproteobacteria-0.1239.92e-083.84e-07
orderDesulfovibrionales-0.1239.92e-083.84e-07
familyDesulfovibrionaceae-0.1239.92e-083.84e-07
speciesEubacterium_hallii-0.1221.11e-074.26e-07
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1221.16e-074.42e-07
speciesCitrobacter_freundii0.1211.54e-075.82e-07
genusAdlercreutzia-0.1192.32e-078.62e-07
speciesAdlercreutzia_equolifaciens-0.1192.32e-078.62e-07
speciesAlistipes_putredinis-0.1192.61e-079.62e-07
speciesWeissella_confusa0.1183.17e-071.16e-06
genusHoldemania-0.1173.88e-071.41e-06
speciesLachnospiraceae_bacterium_3_1_46FAA-0.1174.08e-071.46e-06
genusEscherichia0.1174.09e-071.46e-06
speciesOdoribacter_splanchnicus-0.1174.16e-071.48e-06
speciesEubacterium_rectale-0.1174.37e-071.54e-06
classClostridia-0.1164.67e-071.62e-06
orderClostridiales-0.1164.67e-071.62e-06
speciesRuminococcus_obeum-0.1164.96e-071.71e-06
speciesBacteroides_uniformis-0.1164.99e-071.71e-06
genusBarnesiella-0.1147.29e-072.46e-06
speciesBarnesiella_intestinihominis-0.1147.29e-072.46e-06
speciesCoprococcus_comes-0.1147.93e-072.65e-06
speciesLactobacillus_gasseri0.1139.24e-073.07e-06
speciesDesulfovibrio_desulfuricans-0.1131.03e-063.4e-06
speciesEubacterium_ramulus-0.1121.09e-063.57e-06
speciesEscherichia_coli0.1121.16e-063.78e-06
genusClostridium0.1121.24e-064.01e-06
familyClostridiaceae0.1121.3e-064.17e-06
speciesBacteroides_fragilis0.1121.33e-064.24e-06
speciesDorea_longicatena-0.112.02e-066.4e-06
speciesAnaerotruncus_unclassified-0.1092.22e-066.99e-06
genusPrevotella0.1082.83e-068.85e-06
familyOxalobacteraceae-0.1083.09e-069.6e-06
speciesEnterobacter_aerogenes0.1073.89e-061.2e-05
speciesLactobacillus_oris0.1063.97e-061.22e-05
speciesAlistipes_shahii-0.1064.03e-061.23e-05
genusOxalobacter-0.1064.27e-061.28e-05
speciesOxalobacter_formigenes-0.1064.27e-061.28e-05
genusRuminococcus-0.1064.47e-061.34e-05
genusPantoea0.1055.72e-061.68e-05
speciesPantoea_unclassified0.1055.72e-061.68e-05
genusCollinsella-0.1055.74e-061.68e-05
genusPseudoflavonifractor-0.1045.97e-061.73e-05
speciesPseudoflavonifractor_capillosus-0.1045.97e-061.73e-05
speciesProteus_mirabilis0.1046.72e-061.93e-05
speciesPrevotella_stercorea0.1037.41e-062.12e-05
speciesLactococcus_garvieae0.1038.43e-062.4e-05
speciesDialister_invisus0.1029.49e-062.65e-05
familyBacteroidales_noname-0.1029.56e-062.65e-05
genusBacteroidales_noname-0.1029.56e-062.65e-05
speciesBacteroidales_bacterium_ph8-0.1029.56e-062.65e-05
speciesEnterococcus_faecalis0.1021.07e-052.95e-05
speciesEscherichia_unclassified0.1011.15e-053.16e-05
speciesStreptococcus_infantarius0.1011.23e-053.36e-05
speciesClostridium_hathewayi0.11.44e-053.91e-05
speciesCollinsella_aerofaciens-0.0991.67e-054.5e-05
speciesHoldemania_filiformis-0.0991.86e-054.99e-05
speciesClostridium_bolteae0.0982.39e-056.37e-05
genusEnterobacter0.0972.42e-056.42e-05
orderCoriobacteriales-0.0972.52e-056.61e-05
familyCoriobacteriaceae-0.0972.52e-056.61e-05
classMethanobacteria-0.0972.73e-057.03e-05
orderMethanobacteriales-0.0972.73e-057.03e-05
familyMethanobacteriaceae-0.0972.73e-057.03e-05
genusWeissella0.0972.74e-057.03e-05
speciesAnaerostipes_unclassified0.0963.25e-058.29e-05
speciesHoldemania_unclassified-0.0953.66e-059.29e-05
speciesLactobacillus_amylovorus0.0953.79e-059.57e-05
speciesKlebsiella_unclassified0.0953.82e-059.59e-05
speciesBacteroides_cellulosilyticus-0.0953.91e-059.76e-05
speciesCoprococcus_sp_ART55_1-0.0954.17e-050.000104
genusMethanobrevibacter-0.0945.07e-050.000125
speciesAlistipes_finegoldii-0.0935.44e-050.000134
phylumEuryarchaeota-0.0927.41e-050.000181
familyPorphyromonadaceae-0.0917.53e-050.000183
genusCoprobacter-0.0917.78e-050.000187
speciesCoprobacter_fastidiosus-0.0917.78e-050.000187
phylumVerrucomicrobia-0.0918e-050.000187
classVerrucomicrobiae-0.0918e-050.000187
orderVerrucomicrobiales-0.0918e-050.000187
familyVerrucomicrobiaceae-0.0918e-050.000187
genusAkkermansia-0.0918e-050.000187
speciesAkkermansia_muciniphila-0.0918e-050.000187
genusBilophila-0.0918.4e-050.000195
speciesEnterobacter_cloacae0.0918.83e-050.000204
speciesMethanobrevibacter_smithii-0.099.19e-050.000212
genusDorea-0.099.52e-050.000218
speciesLachnospiraceae_bacterium_2_1_58FAA0.0880.0001480.000337
speciesBilophila_unclassified-0.0880.0001490.000338
familyPeptostreptococcaceae0.0870.0001620.000366
speciesWeissella_cibaria0.0860.0001830.000411
speciesAlistipes_onderdonkii-0.0860.0001920.000429
genusDialister0.0850.000240.000534
speciesBifidobacterium_breve0.0830.0003240.000718
speciesBilophila_wadsworthia-0.0820.0004060.000894
speciesRuminococcus_bromii-0.0820.0004070.000894
speciesFusobacterium_varium0.0810.0004280.000933
speciesDesulfovibrio_piger-0.0810.0004290.000933
genusParabacteroides-0.0810.0004510.000976
speciesBifidobacterium_pseudocatenulatum0.080.0005140.00111
speciesBifidobacterium_adolescentis-0.0790.0006180.00133
speciesLactobacillus_delbrueckii0.0780.0007550.00161
orderAeromonadales0.0780.0007560.00161
genusButyrivibrio-0.0770.0008010.0017
speciesClostridium_clostridioforme0.0760.0009830.00207
speciesMegasphaera_elsdenii0.0760.0009860.00207
speciesRuminococcus_callidus-0.0760.001010.00211
speciesLachnospiraceae_bacterium_6_1_63FAA0.0760.001020.00212
genusBlautia0.0740.001270.00263
speciesSutterella_parvirubra0.0730.001630.00336
speciesEnterococcus_faecium0.0720.001910.00392
speciesLachnospiraceae_bacterium_2_1_46FAA0.0710.002110.00431
speciesAlistipes_sp_AP11-0.070.002610.00531
speciesPrevotella_bivia0.0680.003220.00652
speciesKlebsiella_sp_MS_92_30.0670.00350.00706
speciesLactobacillus_rhamnosus0.0670.003530.00709
speciesDorea_unclassified0.0670.00370.0074
speciesParabacteroides_merdae-0.0670.003890.00775
speciesErysipelotrichaceae_bacterium_2_2_44A0.0660.004230.00839
speciesDorea_formicigenerans-0.0650.004870.00962
speciesClostridiales_bacterium_1_7_47FAA0.0640.00590.0116
genusPorphyromonas0.0640.005970.0117
speciesEubacterium_cylindroides-0.0630.006230.0122
speciesStreptococcus_pasteurianus0.0630.006510.0126
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0630.006530.0126
familyPrevotellaceae0.0620.007020.0135
speciesLactobacillus_casei_paracasei0.0620.007590.0146
genusGordonibacter-0.0610.008140.0155
speciesGordonibacter_pamelaeae-0.0610.008140.0155
speciesPrevotella_copri0.0610.008370.0159
speciesBacteroides_coprocola0.0610.008570.0162
speciesMegasphaera_unclassified0.0610.008590.0162
speciesStreptococcus_phage_Sfi210.060.008990.0168
familyMyoviridae0.0590.01010.0188
speciesEggerthella_unclassified0.0590.01020.019
speciesMethanobrevibacter_unclassified-0.0580.01190.022
genusButyricimonas-0.0570.01320.0242
speciesButyricimonas_synergistica-0.0570.01320.0242
speciesBlautia_producta0.0570.01380.0251
speciesErysipelotrichaceae_bacterium_6_1_450.0570.01380.0251
speciesRuminococcus_sp_5_1_39BFAA-0.0560.01480.0269
familyLeuconostocaceae0.0560.01540.0278
genusEggerthella0.0540.0190.0342
speciesBacteroides_clarus-0.0540.01930.0346
speciesOscillibacter_sp_KLE_1745-0.0540.01960.035
speciesBacteroides_plebeius0.0530.02110.0376
speciesPorphyromonas_asaccharolytica0.0530.02150.0382
speciesClostridium_sp_L2_50-0.0520.02320.041
speciesLactobacillus_reuteri0.0510.02680.0472
speciesRuminococcus_lactaris-0.0510.0270.0474
genusFaecalibacterium-0.0510.02750.0479
speciesFaecalibacterium_prausnitzii-0.0510.02750.0479
familyPropionibacteriaceae0.0510.02890.0502
speciesCollinsella_tanakaei-0.050.02950.051
speciesLachnospiraceae_bacterium_5_1_57FAA0.050.03010.0519
phylumSynergistetes0.050.03130.0531
classSynergistia0.050.03130.0531
orderSynergistales0.050.03130.0531
familySynergistaceae0.050.03130.0531
speciesLactococcus_lactis0.050.03180.0538
genusLactococcus0.0490.03310.0558
genusSlackia0.0490.03340.0561
speciesLeuconostoc_lactis0.0490.03350.0561
speciesStreptococcus_thermophilus0.0480.03770.0629
genusMethanosphaera-0.0470.04260.0706
speciesMethanosphaera_stadtmanae-0.0470.04260.0706
genusButyricicoccus0.0470.04430.0724
speciesButyricicoccus_pullicaecorum0.0470.04430.0724
phylumBacteroidetes-0.0460.04440.0724
classBacteroidia-0.0460.04450.0724
orderBacteroidales-0.0460.04450.0724
genusPyramidobacter0.0450.05030.0813
speciesPyramidobacter_piscolens0.0450.05030.0813
speciesCoriobacteriaceae_bacterium_phI-0.0450.0530.0854
speciesAnaerostipes_hadrus-0.0450.05380.0864
genusRoseburia-0.0440.05960.095
speciesParabacteroides_sp_D13-0.0440.05960.095
speciesRuminococcus_champanellensis-0.0430.06090.0966
speciesEnterobacteria_phage_HK5440.0430.0610.0966
speciesBacteroides_stercoris0.0430.06190.0977
speciesButyrivibrio_unclassified-0.0420.06620.104
speciesEubacterium_biforme-0.0420.0670.105
speciesButyrivibrio_crossotus-0.0420.06750.105
speciesOscillibacter_sp_KLE_1728-0.0420.07110.111
genusRuminococcaceae_noname-0.0420.07270.113
speciesRuminococcaceae_bacterium_D16-0.0420.07270.113
genusPeptostreptococcaceae_noname0.0410.07370.113
speciesEubacterium_limosum-0.0410.07380.113
familyPodoviridae0.0410.07810.12
speciesMegamonas_funiformis-0.0410.07920.121
speciesMitsuokella_multacida-0.040.08410.128
speciesClostridium_sp_ATCC_BAA_4420.040.08490.129
genusClostridiales_noname0.0390.09160.139
speciesAnaerotruncus_colihominis-0.0390.09230.139
speciesBacteroides_intestinalis-0.0390.09480.143
speciesLactobacillus_plantarum0.0380.09930.149
orderViruses_noname0.0380.1010.151
speciesOlsenella_unclassified-0.0370.1060.158
speciesErysipelotrichaceae_bacterium_21_30.0370.1080.16
genusMegamonas0.0370.1120.166
speciesBacteroides_dorei-0.0370.1140.168
speciesBacteroides_nordii-0.0360.1150.169
speciesMegamonas_unclassified0.0370.1150.169
speciesEggerthella_lenta0.0360.120.175
genusPropionibacterium0.0360.1220.177
speciesParabacteroides_goldsteinii-0.0360.1220.177
speciesRoseburia_inulinivorans-0.0350.1250.181
speciesTuricibacter_sanguinis0.0350.1270.183
speciesMitsuokella_unclassified-0.0350.1280.184
genusMyoviridae_noname-0.0350.1290.185
genusMitsuokella-0.0350.1320.189
genusParasutterella-0.0350.1360.193
speciesOdoribacter_laneus-0.0350.1360.193
speciesParasutterella_excrementihominis-0.0350.1360.193
speciesBacteroides_pectinophilus-0.0340.1370.194
genusCoriobacteriaceae_noname-0.0340.1380.194
speciesCoprococcus_eutactus-0.0340.140.196
speciesClostridium_bartlettii0.0340.140.196
familyLachnospiraceae-0.0340.1430.2
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0330.150.209
speciesBacteroides_sp_3_1_19-0.0330.1590.221
speciesRoseburia_unclassified0.0320.1630.226
speciesLactococcus_phage_phi7-0.0320.1670.23
speciesBacteroides_faecis0.030.190.261
speciesEubacterium_eligens-0.030.1910.262
speciesParaprevotella_xylaniphila-0.030.1920.263
speciesLactococcus_phage_P680-0.030.2010.274
orderCaudovirales0.0290.2030.275
speciesLactococcus_phage_jm2-0.0290.2030.275
genusAcidaminococcaceae_unclassified-0.0290.2050.276
speciesLachnospiraceae_bacterium_1_4_56FAA0.0290.2050.276
genusLachnospiraceae_noname-0.0290.210.282
speciesParabacteroides_distasonis-0.0290.2160.29
speciesLactococcus_phage_bIL670.0290.2170.29
speciesBacteroides_salanitronis-0.0280.2220.296
phylumViruses_noname0.0280.2290.304
classViruses_noname0.0280.2290.304
speciesBifidobacterium_bifidum0.0280.2310.305
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0270.2440.322
genusFlavonifractor0.0260.2550.334
speciesFlavonifractor_plautii0.0260.2550.334
speciesErysipelotrichaceae_bacterium_3_1_530.0260.2650.346
speciesBacteroides_thetaiotaomicron0.0260.2690.351
speciesRoseburia_intestinalis-0.0250.2720.354
speciesCoprobacillus_sp_29_10.0250.2770.359
speciesBacteroides_sp_1_1_60.0240.2940.38
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0240.2960.382
familyStaphylococcaceae0.0240.2970.382
speciesClostridium_asparagiforme-0.0230.310.398
orderBifidobacteriales0.0230.3140.401
familyBifidobacteriaceae0.0230.3140.401
speciesAlistipes_sp_HGB5-0.0230.3250.413
speciesLactococcus_phage_936_sensu_lato-0.0230.3280.416
speciesCoprobacillus_sp_D60.0220.3310.419
speciesBacteroides_barnesiae-0.0220.3480.439
speciesBacteroides_oleiciplenus0.0210.3710.467
speciesEubacterium_dolichum0.020.3780.475
genusSutterellaceae_unclassified0.020.380.476
speciesTuricibacter_unclassified0.020.3820.477
speciesRuminococcus_torques-0.020.3850.479
speciesSutterella_wadsworthensis-0.020.3950.491
genusBifidobacterium0.020.3990.493
speciesLachnospiraceae_bacterium_1_1_57FAA-0.020.3990.493
genusAcidaminococcus0.0190.4070.502
speciesBacteroides_caccae-0.0190.420.516
genusClostridiaceae_noname0.0180.4430.542
speciesClostridiaceae_bacterium_JC1180.0180.4430.542
genusTunalikevirus-0.0180.4460.544
speciesSlackia_piriformis-0.0170.4510.549
speciesClostridium_spiroforme-0.0170.4530.549
genusTuricibacter0.0170.4540.549
familyAcidaminococcaceae-0.0160.4810.579
speciesParabacteroides_johnsonii-0.0160.4810.579
speciesKlebsiella_phage_KP36-0.0160.4890.587
genusPhascolarctobacterium-0.0160.4940.59
speciesPhascolarctobacterium_succinatutens-0.0160.4940.59
speciesBacteroides_vulgatus-0.0150.5060.603
genusBurkholderiales_noname-0.0150.5120.607
speciesBurkholderiales_bacterium_1_1_47-0.0150.5120.607
speciesBacteroides_sp_2_1_220.0150.5240.619
speciesBifidobacterium_angulatum-0.0150.5250.619
speciesParaprevotella_clara-0.0140.5310.625
familyBurkholderiales_noname-0.0140.5450.64
speciesBacteroides_massiliensis0.0140.5490.643
speciesBacteroides_finegoldii-0.0140.5590.653
speciesBlautia_hydrogenotrophica-0.0130.5690.661
speciesOdoribacter_unclassified-0.0130.570.661
speciesC2likevirus_unclassified-0.0130.570.661
speciesAcidaminococcus_intestini0.0130.5770.668
genusParaprevotella-0.0120.590.681
speciesBifidobacterium_longum0.0120.5920.682
classErysipelotrichia-0.0120.6050.691
orderErysipelotrichales-0.0120.6050.691
familyErysipelotrichaceae-0.0120.6050.691
genusLambdalikevirus0.0120.6130.698
speciesParaprevotella_unclassified-0.0120.6140.698
speciesLactobacillus_acidophilus-0.0120.6180.701
speciesMegamonas_hypermegale0.0110.6270.71
speciesBifidobacterium_catenulatum0.0110.630.711
speciesEggerthella_sp_1_3_56FAA0.0110.640.721
speciesClostridium_citroniae0.0110.6460.726
speciesLactobacillus_sanfranciscensis-0.010.6660.746
speciesBacteroides_eggerthii-0.010.6680.746
orderBurkholderiales-0.010.6690.746
familyViruses_noname0.0090.690.766
genusViruses_noname0.0090.690.766
speciesBacteroides_ovatus0.0090.7010.774
familySuccinivibrionaceae-0.0090.7030.774
genusC2likevirus-0.0090.7040.774
speciesEubacterium_sp_3_1_310.0090.7050.774
genusCatenibacterium-0.0090.7070.774
speciesCatenibacterium_mitsuokai-0.0090.7070.774
speciesBacteroides_sp_4_3_47FAA0.0090.7080.774
speciesLactobacillus_ruminis-0.0080.720.785
familySutterellaceae-0.0080.7230.786
speciesAcidaminococcus_unclassified0.0080.7360.799
genusSuccinatimonas-0.0080.7440.804
speciesSuccinatimonas_hippei-0.0080.7440.804
speciesMegamonas_rupellensis0.0070.7620.821
classBetaproteobacteria0.0070.7650.823
genusLeuconostoc0.0070.7730.829
familyBacteroidaceae0.0060.780.833
genusBacteroides0.0060.780.833
speciesCollinsella_unclassified0.0060.8040.856
genusAnaerostipes-0.0060.8050.856
phylumFirmicutes-0.0060.8110.86
speciesCollinsella_intestinalis0.0050.8240.871
speciesPropionibacterium_freudenreichii0.0050.8250.871
speciesPeptostreptococcaceae_noname_unclassified-0.0050.8310.876
speciesAlistipes_unclassified0.0050.8340.877
familyClostridiales_noname-0.0050.8370.878
genusSiphoviridae_noname0.0050.840.878
speciesBacteroides_coprophilus0.0050.8410.878
genusErysipelotrichaceae_noname0.0040.8530.885
speciesAcidaminococcus_fermentans-0.0040.8530.885
speciesBacteroides_xylanisolvens0.0040.8530.885
speciesClostridium_sp_KLE_17550.0040.8580.888
genusSutterella-0.0040.8640.892
speciesParabacteroides_sp_20_3-0.0040.8670.894
genusOlsenella-0.0040.8760.901
speciesHoldemania_sp_AP2-0.0030.8890.912
familySiphoviridae0.0030.8920.913
genusStaphylococcus0.0030.8960.913
speciesDialister_succinatiphilus-0.0030.8970.913
phylumActinobacteria0.0030.8990.913
classActinobacteria0.0030.8990.913
speciesRuminococcus_sp_JC3040.0030.910.922
speciesBacteroides_salyersiae0.0020.9290.939
speciesBifidobacterium_animalis-0.0010.9510.959
speciesLachnospiraceae_bacterium_8_1_57FAA0.00.9830.989
orderPseudomonadales0.00.9880.99
speciesBacteroides_fluxus0.00.9880.99
speciesParabacteroides_unclassified0.00.9980.998
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.0007418010260141.87776919409e-051.69811180639e-128012.69072
Crohns diseaseSpain17660.002066930739192.26950414145e-050.00366423898715618020.5486
Colorectal cancerAustria64350.0001636051121965.80346197852e-060.024516894902915775.33563
Ulcerative colitisSpain78665.28630784682e-052.26950414145e-050.16914169759963231.7741
ObesityDenmark1691233.92706335743e-061.68271657276e-060.3794028753241635953.793
Rheumatoid arthritisChina127981.29635089768e-051.59943129742e-050.5990940120231983066.1287
Type II diabetesSweden53923.3204759754e-069.42487429046e-070.7092801354912161273.1866
Type II diabetesDenmark752772.5777069965e-063.01690156588e-060.8000310990092672387.5963
Type II diabetesChina1831853.33445740932e-051.73191450166e-050.9711339345272981298.5228
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382