MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-12-04 20:26:53 PST
Job id & description: 2289, check
Query type: dna
Count queries & homologs: 1, 3
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
check16279Completeunknownunknownunknownunknown100.0100.098.17
check16458Completeunknownunknownunknownunknown100.0100.097.78
check16313Completeunknownunknownunknownunknown99.8499.8483.87
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
genusCoprococcus0.2531.05e-281.73e-26
classClostridia0.2531.1e-281.73e-26
orderClostridiales0.2531.1e-281.73e-26
familyEubacteriaceae0.2358.28e-258.1e-23
genusEubacterium0.2358.64e-258.1e-23
speciesEubacterium_ramulus0.2341.03e-248.1e-23
speciesCoprococcus_catus0.2291.36e-239.17e-22
speciesRuminococcus_obeum0.2241.02e-226.02e-21
familyRuminococcaceae0.2191.09e-215.72e-20
speciesRoseburia_hominis0.2148.5e-213.87e-19
genusButyrivibrio0.2149.01e-213.87e-19
speciesEubacterium_hallii0.2131.1e-204.33e-19
speciesEubacterium_siraeum0.2131.36e-204.94e-19
speciesSubdoligranulum_unclassified0.2122.02e-206.81e-19
speciesRuminococcus_gnavus-0.214e-201.26e-18
familyLachnospiraceae0.2062.11e-196.22e-18
genusSubdoligranulum0.2062.47e-196.86e-18
genusAdlercreutzia0.2044.42e-191.1e-17
speciesAdlercreutzia_equolifaciens0.2044.42e-191.1e-17
speciesCoprococcus_comes0.2037.92e-191.87e-17
phylumFirmicutes0.2011.88e-184.23e-17
speciesDorea_longicatena0.22.39e-185.13e-17
speciesAnaerostipes_hadrus0.22.52e-185.17e-17
speciesEubacterium_rectale0.1984.55e-188.95e-17
speciesButyrivibrio_crossotus0.1942.76e-175.21e-16
speciesEubacterium_eligens0.1934.42e-178.02e-16
genusDorea0.191.31e-162.29e-15
speciesCoprococcus_sp_ART55_10.1864.99e-168.41e-15
genusBarnesiella0.1831.32e-152.08e-14
speciesBarnesiella_intestinihominis0.1831.32e-152.08e-14
speciesAnaerotruncus_unclassified0.1761.67e-142.54e-13
speciesLachnospiraceae_bacterium_3_1_46FAA0.1744e-145.9e-13
speciesLachnospiraceae_bacterium_5_1_63FAA0.1691.86e-132.66e-12
speciesCoprobacillus_unclassified-0.1682.97e-134.12e-12
genusFaecalibacterium0.1664.42e-135.8e-12
speciesFaecalibacterium_prausnitzii0.1664.42e-135.8e-12
speciesRuminococcus_sp_5_1_39BFAA0.1665.67e-137.23e-12
speciesRuminococcus_lactaris0.162.95e-123.66e-11
speciesEubacterium_ventriosum0.163.34e-124.04e-11
speciesStreptococcus_thermophilus0.163.56e-124.2e-11
speciesClostridium_bolteae-0.1561.17e-111.35e-10
speciesDorea_formicigenerans0.1551.71e-111.92e-10
genusCoprobacillus-0.1533.02e-113.31e-10
genusAnaerostipes0.1524.23e-114.54e-10
genusCoprobacter0.1515.27e-115.41e-10
speciesCoprobacter_fastidiosus0.1515.27e-115.41e-10
genusRuminococcus0.157.4e-117.43e-10
speciesMethanobrevibacter_smithii0.1499.75e-119.59e-10
speciesAlistipes_senegalensis0.1481.14e-101.1e-09
phylumVerrucomicrobia0.1471.54e-101.32e-09
classVerrucomicrobiae0.1471.54e-101.32e-09
orderVerrucomicrobiales0.1471.54e-101.32e-09
familyVerrucomicrobiaceae0.1471.54e-101.32e-09
genusAkkermansia0.1471.54e-101.32e-09
speciesAkkermansia_muciniphila0.1471.54e-101.32e-09
familyBacteroidales_noname0.1462.45e-101.99e-09
genusBacteroidales_noname0.1462.45e-101.99e-09
speciesBacteroidales_bacterium_ph80.1462.45e-101.99e-09
speciesCoprococcus_eutactus0.1435.47e-104.38e-09
speciesClostridium_ramosum-0.1426.03e-104.74e-09
genusMegasphaera-0.1426.53e-105.05e-09
classBacteroidia-0.1427.64e-105.66e-09
orderBacteroidales-0.1427.64e-105.66e-09
phylumBacteroidetes-0.1427.67e-105.66e-09
classMethanobacteria0.141.07e-097.54e-09
orderMethanobacteriales0.141.07e-097.54e-09
familyMethanobacteriaceae0.141.07e-097.54e-09
speciesCollinsella_aerofaciens0.141.17e-098.12e-09
speciesLachnospiraceae_bacterium_7_1_58FAA0.141.2e-098.21e-09
genusMethanobrevibacter0.1391.61e-091.09e-08
phylumEuryarchaeota0.1391.75e-091.16e-08
genusRoseburia0.1382.17e-091.42e-08
speciesMitsuokella_unclassified0.1372.69e-091.74e-08
speciesBacteroides_pectinophilus0.1372.83e-091.81e-08
speciesBifidobacterium_adolescentis0.1354.94e-093.11e-08
orderEnterobacteriales-0.1321.04e-086.38e-08
familyEnterobacteriaceae-0.1321.04e-086.38e-08
speciesKlebsiella_pneumoniae-0.1321.1e-086.66e-08
speciesClostridium_sp_L2_500.1311.17e-086.99e-08
genusMitsuokella0.1311.37e-088.08e-08
genusAnaerotruncus0.1311.45e-088.3e-08
genusPseudoflavonifractor0.1311.46e-088.3e-08
speciesPseudoflavonifractor_capillosus0.1311.46e-088.3e-08
phylumProteobacteria-0.131.63e-089.16e-08
classGammaproteobacteria-0.1264.48e-082.49e-07
speciesClostridium_leptum0.1247.24e-083.97e-07
genusFlavonifractor-0.1221.22e-076.54e-07
speciesFlavonifractor_plautii-0.1221.22e-076.54e-07
speciesClostridium_nexile-0.1211.38e-077.32e-07
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.1192.2e-071.15e-06
genusEscherichia-0.1192.24e-071.16e-06
phylumFusobacteria-0.1192.42e-071.2e-06
classFusobacteriia-0.1192.42e-071.2e-06
orderFusobacteriales-0.1192.42e-071.2e-06
speciesClostridiales_bacterium_1_7_47FAA-0.1192.42e-071.2e-06
speciesRuminococcus_bromii0.1182.82e-071.39e-06
familyFusobacteriaceae-0.1182.9e-071.41e-06
genusFusobacterium-0.1183.39e-071.63e-06
genusCollinsella0.1164.75e-072.26e-06
speciesMegasphaera_unclassified-0.1165.19e-072.45e-06
speciesAlistipes_onderdonkii0.1156.84e-073.2e-06
speciesRoseburia_inulinivorans0.1147.35e-073.4e-06
genusKlebsiella-0.1121.21e-065.54e-06
genusLachnospiraceae_noname0.1111.37e-066.22e-06
speciesEscherichia_coli-0.1111.5e-066.74e-06
speciesClostridium_clostridioforme-0.111.75e-067.79e-06
speciesEggerthella_unclassified-0.111.84e-068.12e-06
familyBacteroidaceae-0.111.98e-068.57e-06
genusBacteroides-0.111.98e-068.57e-06
speciesClostridium_symbiosum-0.1082.7e-061.16e-05
speciesRuminococcus_callidus0.1073.33e-061.42e-05
speciesRuminococcus_champanellensis0.1064.77e-062.01e-05
speciesLachnospiraceae_bacterium_5_1_57FAA-0.1047.01e-062.93e-05
genusEggerthella-0.1021.06e-054.39e-05
genusRuminococcaceae_noname0.1011.14e-054.64e-05
speciesRuminococcaceae_bacterium_D160.1011.14e-054.64e-05
speciesAnaerostipes_unclassified-0.11.62e-056.52e-05
speciesAlistipes_shahii0.11.63e-056.52e-05
genusTuricibacter0.0981.99e-057.89e-05
speciesTuricibacter_sanguinis0.0972.61e-050.000103
speciesFusobacterium_ulcerans-0.0944.64e-050.000181
speciesOdoribacter_unclassified0.0944.71e-050.000182
speciesClostridium_hathewayi-0.0944.83e-050.000185
speciesTuricibacter_unclassified0.0935.34e-050.000203
genusPantoea-0.0926.97e-050.000261
speciesPantoea_unclassified-0.0926.97e-050.000261
orderCoriobacteriales0.0927.4e-050.000273
familyCoriobacteriaceae0.0927.4e-050.000273
speciesBlautia_producta-0.0917.88e-050.000288
genusMegamonas-0.0918.2e-050.000298
speciesMegamonas_unclassified-0.0918.65e-050.000312
speciesEscherichia_unclassified-0.090.0001010.000361
speciesFusobacterium_varium-0.090.0001050.000373
speciesAlistipes_indistinctus0.0890.0001150.000405
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0880.0001380.000482
speciesBacteroides_cellulosilyticus0.0870.0001520.000528
speciesBifidobacterium_catenulatum0.0860.0001880.000648
speciesMegamonas_rupellensis-0.0860.0001950.000667
speciesClostridium_citroniae-0.0850.0002240.000761
speciesMethanobrevibacter_unclassified0.0840.0002990.00101
speciesAlistipes_putredinis0.0830.0003330.00111
speciesBacteroides_stercoris-0.0820.0003650.00121
speciesHoldemania_unclassified0.0820.0003740.00123
speciesLachnospiraceae_bacterium_1_4_56FAA-0.0810.0004290.00141
familyPeptostreptococcaceae0.0810.0004610.0015
genusPeptostreptococcaceae_noname0.0810.0004710.00152
speciesParaprevotella_xylaniphila0.080.0005150.00165
speciesLachnospiraceae_bacterium_6_1_63FAA-0.080.0005180.00165
genusOdoribacter0.080.0005290.00168
speciesStreptococcus_parasanguinis0.080.000540.0017
speciesFusobacterium_mortiferum-0.080.0005660.00177
speciesBacteroides_thetaiotaomicron-0.0780.0007310.00227
genusStreptococcus0.0780.000750.00231
speciesRoseburia_intestinalis0.0770.0008140.00249
familyVeillonellaceae-0.0770.0008940.00272
classNegativicutes-0.0770.0009040.00272
orderSelenomonadales-0.0770.0009040.00272
speciesPeptostreptococcaceae_noname_unclassified0.0760.0009840.00294
genusParaprevotella0.0760.001020.00303
speciesMegamonas_hypermegale-0.0760.001030.00304
familySiphoviridae0.0760.001040.00305
familyStreptococcaceae0.0750.001170.00341
speciesEubacterium_limosum-0.0740.001270.00366
speciesBacteroides_massiliensis0.0740.001270.00366
genusSiphoviridae_noname0.0740.00140.004
speciesBacteroides_ovatus-0.0740.001410.00401
speciesPrevotella_buccae-0.0740.001420.00401
speciesButyrivibrio_unclassified0.0730.001470.00413
speciesStreptococcus_mitis_oralis_pneumoniae-0.0730.00150.00419
speciesParaprevotella_unclassified0.0730.001540.00428
genusPrevotella-0.0730.001550.00428
speciesEubacterium_cylindroides0.0720.001830.00502
familyRikenellaceae0.0710.002020.00548
genusAlistipes0.0710.002020.00548
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0710.002030.00548
speciesMegamonas_funiformis-0.0710.002250.00603
speciesEggerthella_lenta-0.070.002330.00621
speciesClostridium_bartlettii0.070.002550.00676
orderCaudovirales0.0690.002740.00723
speciesBacteroides_eggerthii0.0690.002850.00746
speciesBacteroides_intestinalis0.0690.002860.00746
speciesStreptococcus_salivarius0.0690.003020.00783
speciesEubacterium_biforme0.0680.003180.0082
speciesErysipelotrichaceae_bacterium_3_1_53-0.0680.003250.00834
speciesAlistipes_finegoldii0.0680.003410.0087
phylumActinobacteria0.0670.003790.00957
classActinobacteria0.0670.003790.00957
speciesStreptococcus_pasteurianus-0.0670.003840.00964
genusBifidobacterium0.0660.004340.0108
speciesBifidobacterium_animalis0.0660.004550.0113
orderBifidobacteriales0.0650.005010.0123
familyBifidobacteriaceae0.0650.005010.0123
phylumViruses_noname0.0650.005040.0123
classViruses_noname0.0650.005040.0123
speciesDesulfovibrio_desulfuricans0.0640.005820.0141
speciesMegasphaera_micronuciformis-0.0630.006260.0151
speciesRuminococcus_torques0.0630.00660.0157
speciesLachnospiraceae_bacterium_1_1_57FAA0.0630.006610.0157
speciesPrevotella_copri-0.0630.006640.0157
speciesOdoribacter_splanchnicus0.0630.006840.0161
genusGordonibacter0.0620.007140.0167
speciesGordonibacter_pamelaeae0.0620.007140.0167
genusMethanosphaera0.0620.007250.0168
speciesMethanosphaera_stadtmanae0.0620.007250.0168
speciesBacteroides_fragilis-0.0620.007350.0169
speciesBacteroides_clarus0.060.008960.0205
speciesEnterobacter_cloacae-0.060.009230.021
genusOxalobacter0.060.009440.0213
speciesOxalobacter_formigenes0.060.009440.0213
familyOxalobacteraceae0.0590.01050.0235
speciesParabacteroides_sp_20_30.0590.01050.0235
genusButyricimonas0.0590.01070.0237
speciesButyricimonas_synergistica0.0590.01070.0237
speciesClostridium_perfringens-0.0590.01130.0249
speciesCollinsella_intestinalis-0.0580.01170.0257
speciesHoldemania_filiformis0.0580.01270.0278
speciesEubacterium_dolichum-0.0570.01410.0307
genusOlsenella0.0560.01470.0318
genusDesulfovibrio0.0560.01490.032
speciesParabacteroides_johnsonii0.0560.01490.032
speciesOlsenella_unclassified0.0560.01540.0329
speciesBacteroides_faecis0.0560.01560.0332
genusHoldemania0.0560.01570.0332
genusEnterobacter-0.0560.0160.0337
speciesSutterella_parvirubra-0.0560.01640.0344
genusClostridiaceae_noname-0.0550.01690.0351
speciesClostridiaceae_bacterium_JC118-0.0550.01690.0351
genusAcidaminococcus-0.0540.01880.0389
genusPyramidobacter-0.0530.02130.0437
speciesPyramidobacter_piscolens-0.0530.02130.0437
speciesAnaerotruncus_colihominis-0.0530.02210.0452
speciesAcidaminococcus_intestini-0.0530.02240.0456
genusStaphylococcus0.0520.02490.0504
familyStaphylococcaceae0.0520.0250.0504
speciesAcidaminococcus_fermentans-0.0520.02570.0516
speciesLactobacillus_mucosae-0.0510.02660.0532
genusWeissella-0.0510.02670.0532
speciesBifidobacterium_longum0.0510.02690.0533
genusC2likevirus0.0510.02850.0563
speciesBifidobacterium_angulatum0.050.02910.0572
speciesC2likevirus_unclassified0.050.02960.058
classBacilli0.050.03040.0593
speciesClostridium_sp_ATCC_BAA_442-0.050.03210.0624
speciesParaprevotella_clara0.0490.0340.0658
familyBacillales_noname-0.0490.03530.0675
genusGemella-0.0490.03530.0675
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0490.03530.0675
speciesOscillibacter_sp_KLE_1728-0.0490.03550.0676
speciesLactococcus_phage_P6800.0480.03690.0699
speciesBifidobacterium_breve-0.0480.0380.0717
speciesBacteroides_uniformis0.0480.03950.0743
familyClostridiaceae-0.0470.04050.0756
speciesBacteroides_vulgatus-0.0470.04050.0756
speciesParabacteroides_unclassified-0.0470.04090.076
orderLactobacillales0.0470.04170.0772
speciesVeillonella_atypica0.0470.04340.08
genusClostridium-0.0460.04570.0839
genusParasutterella0.0460.04790.0873
speciesParasutterella_excrementihominis0.0460.04790.0873
speciesSutterella_wadsworthensis0.0440.05460.0991
speciesParabacteroides_goldsteinii0.0440.05480.0991
phylumSynergistetes-0.0440.05570.0992
classSynergistia-0.0440.05570.0992
orderSynergistales-0.0440.05570.0992
familySynergistaceae-0.0440.05570.0992
speciesFusobacterium_nucleatum-0.0440.05690.101
genusPhascolarctobacterium0.0440.0580.102
speciesPhascolarctobacterium_succinatutens0.0440.0580.102
speciesCitrobacter_unclassified-0.0430.06050.106
genusClostridiales_noname-0.0430.06060.106
speciesMegasphaera_elsdenii-0.0430.06330.11
speciesCollinsella_tanakaei-0.0420.06720.117
speciesDorea_unclassified-0.0420.06980.121
genusParabacteroides-0.0410.07330.126
speciesPropionibacterium_freudenreichii0.0410.07450.128
speciesPrevotella_stercorea-0.0410.07560.129
genusEnterococcus-0.0410.0760.13
speciesStreptococcus_australis-0.0410.07630.13
speciesKlebsiella_unclassified-0.0410.07910.134
speciesBacteroides_plebeius-0.0410.07950.134
genusCampylobacter-0.040.08350.14
speciesBacteroides_coprophilus-0.0390.09470.159
speciesBacteroides_salanitronis0.0390.09540.159
familyClostridiales_Family_XI_Incertae_Sedis-0.0380.09630.16
familyCampylobacteraceae-0.0380.09660.16
speciesAcidaminococcus_unclassified-0.0380.09690.16
speciesStreptococcus_infantarius-0.0380.09860.162
speciesLactobacillus_rhamnosus0.0380.0990.162
speciesBacteroides_salyersiae0.0380.10.163
familyEnterococcaceae-0.0380.1030.167
speciesAlistipes_sp_HGB50.0380.1030.167
speciesBacteroides_xylanisolvens-0.0380.1040.168
speciesPeptostreptococcus_stomatis-0.0370.1050.169
speciesGemella_morbillorum-0.0370.1090.174
speciesWeissella_cibaria-0.0370.1090.174
speciesPorphyromonas_uenonis-0.0370.1130.18
familyClostridiales_noname-0.0360.1190.189
classEpsilonproteobacteria-0.0350.1270.2
orderCampylobacterales-0.0350.1270.2
speciesLactobacillus_salivarius-0.0350.1270.2
speciesBacteroides_dorei0.0350.1310.205
speciesOscillibacter_unclassified0.0350.1350.211
speciesLactobacillus_fermentum-0.0340.1380.215
familyActinomycetaceae0.0340.1390.215
genusCitrobacter-0.0340.1390.215
speciesParabacteroides_sp_D130.0340.140.216
speciesLactococcus_garvieae-0.0340.1430.22
genusSutterella0.0340.1470.225
familyMyoviridae-0.0330.1510.231
speciesEnterobacteria_phage_HK544-0.0330.1570.239
speciesAlistipes_sp_AP110.0320.1680.255
speciesErysipelotrichaceae_bacterium_21_30.0310.1770.268
familyOscillospiraceae0.0310.180.27
genusSlackia-0.0310.180.27
genusOscillibacter0.0310.180.27
orderActinomycetales0.0310.1810.27
speciesParabacteroides_distasonis0.0310.1820.271
speciesBacteroides_sp_4_3_47FAA-0.0310.1840.273
speciesWeissella_confusa-0.030.1870.277
speciesCollinsella_unclassified-0.030.190.28
speciesLactococcus_phage_phi70.030.1920.282
speciesBacteroides_sp_2_1_220.030.1950.286
speciesDesulfovibrio_piger0.030.20.292
speciesCampylobacter_concisus-0.030.2010.293
speciesClostridium_sp_KLE_1755-0.0290.2030.295
speciesParvimonas_unclassified-0.0290.2060.298
genusParvimonas-0.0290.2070.299
speciesLactobacillus_ruminis0.0290.2160.311
speciesLactobacillus_casei_paracasei0.0290.2170.311
speciesCitrobacter_freundii-0.0290.2180.312
speciesLachnospiraceae_bacterium_8_1_57FAA0.0280.2220.317
familyViruses_noname-0.0280.2310.327
genusViruses_noname-0.0280.2310.327
genusSolobacterium-0.0270.2350.331
speciesSolobacterium_moorei-0.0270.2350.331
speciesRuminococcus_sp_JC3040.0270.2420.34
genusBlautia0.0270.2430.34
genusActinomyces0.0270.2440.341
speciesEnterococcus_faecalis-0.0270.2470.344
speciesStreptococcus_gordonii-0.0260.2630.365
speciesCoprobacillus_sp_D60.0260.2640.365
speciesLactobacillus_acidophilus0.0260.2680.37
speciesLactobacillus_crispatus-0.0250.2710.373
familyLeuconostocaceae-0.0250.2870.394
speciesBifidobacterium_pseudocatenulatum-0.0240.290.397
orderBacillales-0.0240.2920.398
genusBurkholderiales_noname0.0240.2970.403
speciesBurkholderiales_bacterium_1_1_470.0240.2970.403
speciesLactococcus_phage_bIL670.0240.2980.403
familyBurkholderiales_noname0.0240.30.405
speciesClostridium_asparagiforme-0.0240.3040.409
speciesClostridium_spiroforme-0.0240.3050.409
familyPrevotellaceae-0.0230.3150.421
speciesBacteroides_caccae0.0230.320.427
genusSutterellaceae_unclassified-0.0230.3250.432
speciesLactococcus_lactis0.0220.3480.46
speciesStreptococcus_lutetiensis-0.0220.3490.46
speciesEnterobacter_aerogenes-0.0220.3490.46
speciesStreptococcus_sanguinis-0.0210.3540.465
familyAcidaminococcaceae0.0210.3560.467
speciesBacteroides_barnesiae0.0210.3640.476
genusMorganella-0.020.3770.49
speciesMorganella_morganii-0.020.3770.49
speciesStreptococcus_anginosus-0.020.3790.491
speciesBacteroides_finegoldii0.020.3810.493
speciesRoseburia_unclassified-0.020.3920.506
genusMyoviridae_noname0.020.3940.507
familyPodoviridae0.020.3950.507
speciesPeptostreptococcus_anaerobius0.020.3960.507
speciesBacteroides_sp_1_1_6-0.0190.4090.522
speciesStreptococcus_mutans0.0190.4110.523
speciesOscillibacter_sp_KLE_1745-0.0190.4170.529
speciesBlautia_hydrogenotrophica0.0180.4240.537
genusPeptostreptococcus-0.0180.4270.539
classErysipelotrichia0.0180.4320.541
orderErysipelotrichales0.0180.4320.541
familyErysipelotrichaceae0.0180.4320.541
orderViruses_noname0.0180.440.549
speciesPorphyromonas_asaccharolytica0.0180.4420.55
genusErysipelotrichaceae_noname0.0170.4590.57
genusPorphyromonas0.0160.4910.608
speciesHaemophilus_sputorum0.0160.4940.61
speciesOdoribacter_laneus0.0160.4960.611
speciesDialister_invisus0.0160.5020.617
speciesKlebsiella_sp_MS_92_3-0.0150.5110.626
speciesKlebsiella_phage_KP360.0150.5150.63
speciesBifidobacterium_bifidum0.0150.5250.64
speciesBacteroides_sp_3_1_19-0.0150.530.645
genusPropionibacterium0.0140.5450.66
speciesBifidobacterium_dentium-0.0140.5450.66
speciesEnterococcus_faecium-0.0140.550.664
orderPasteurellales0.0140.5590.671
familyPasteurellaceae0.0140.5590.671
speciesEubacterium_sp_3_1_31-0.0130.5660.678
speciesStreptococcus_phage_Sfi210.0130.5860.7
speciesErysipelotrichaceae_bacterium_6_1_450.0120.5960.71
genusHaemophilus0.0120.6110.726
speciesBilophila_unclassified-0.0120.6160.731
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0120.6180.731
genusLeuconostoc0.0110.6270.74
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0110.630.742
speciesMitsuokella_multacida-0.0110.6340.744
speciesProteus_mirabilis0.0110.6390.748
speciesVeillonella_dispar0.0110.6430.751
classDeltaproteobacteria0.0110.6480.751
orderDesulfovibrionales0.0110.6480.751
familyDesulfovibrionaceae0.0110.6480.751
speciesHaemophilus_parainfluenzae0.0110.6490.751
speciesLactobacillus_vaginalis0.010.6520.752
genusTunalikevirus0.010.6530.752
genusProteus0.010.660.758
genusVeillonella0.010.6670.763
genusAcidaminococcaceae_unclassified0.010.6690.763
genusBilophila-0.010.6690.763
speciesErysipelotrichaceae_bacterium_2_2_44A-0.010.6750.768
familySutterellaceae0.0090.6830.772
genusCatenibacterium-0.0090.6840.772
speciesCatenibacterium_mitsuokai-0.0090.6840.772
speciesParabacteroides_merdae-0.0090.6880.775
speciesEggerthella_sp_1_3_56FAA0.0090.6940.78
speciesLactobacillus_reuteri-0.0090.6970.781
genusDialister0.0090.70.783
speciesLactobacillus_delbrueckii0.0090.710.792
genusLambdalikevirus-0.0080.720.802
speciesBacteroides_fluxus-0.0080.7290.807
speciesLactobacillus_gasseri0.0080.7290.807
genusSuccinatimonas-0.0080.7340.807
speciesSuccinatimonas_hippei-0.0080.7340.807
genusButyricicoccus-0.0080.7350.807
speciesButyricicoccus_pullicaecorum-0.0080.7350.807
orderAeromonadales-0.0080.7370.807
genusPeptoniphilus-0.0080.7410.81
genusActinobacillus0.0070.7470.812
speciesActinobacillus_unclassified0.0070.7470.812
speciesLactobacillus_sanfranciscensis0.0070.7580.821
speciesLactococcus_phage_936_sensu_lato0.0070.760.821
speciesDialister_succinatiphilus-0.0070.760.821
speciesStreptococcus_vestibularis0.0070.7630.822
speciesBacteroides_nordii-0.0070.7660.822
speciesVeillonella_parvula0.0070.7660.822
genusLactococcus0.0070.7760.831
speciesCoriobacteriaceae_bacterium_phI-0.0060.7940.847
speciesPrevotella_bivia-0.0060.7960.847
speciesRothia_mucilaginosa0.0060.7970.847
speciesKlebsiella_oxytoca-0.0060.80.849
speciesAggregatibacter_segnis-0.0060.8050.852
speciesSlackia_piriformis-0.0050.8130.858
speciesLactobacillus_amylovorus-0.0050.8230.867
genusCoriobacteriaceae_noname-0.0050.8330.876
familyPorphyromonadaceae0.0040.8560.898
speciesBilophila_wadsworthia0.0040.8720.913
speciesVeillonella_unclassified0.0030.8810.92
familyPropionibacteriaceae-0.0030.8860.923
orderBurkholderiales0.0030.8880.923
genusAggregatibacter-0.0030.8960.928
genusLactobacillus-0.0030.8970.928
genusRothia0.0030.90.929
orderPseudomonadales0.0030.9010.929
familyMicrococcaceae0.0030.9090.935
speciesHoldemania_sp_AP2-0.0020.9240.948
speciesLactobacillus_plantarum0.0020.9360.957
speciesLactococcus_phage_jm2-0.0020.9370.957
speciesHaemophilus_paraphrohaemolyticus-0.0020.9430.961
speciesCoprobacillus_sp_29_1-0.0010.9480.964
classBetaproteobacteria-0.0010.9570.971
speciesBacteroides_oleiciplenus0.0010.9660.978
familyLactobacillaceae-0.0010.9710.981
speciesBacteroides_coprocola0.0010.9760.983
speciesLactobacillus_oris0.0010.9780.983
familySuccinivibrionaceae-0.0010.9790.983
speciesAlistipes_unclassified0.0010.9810.983
speciesLeuconostoc_lactis0.00.9960.996
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.0001252387352470.0009408938247230.0107619200127821627.3184
Ulcerative colitisSpain78660.0007826279196660.0009408938247230.021159999299629209.63251
Type II diabetesDenmark752770.0002463575193330.0004795298762340.0218179927345540017.7009
ObesityDenmark1691230.000495426325530.0004522754362590.11197309825783525.7637
Liver cirrhosisChina1201140.0003336257956220.0002140797042950.2860980831852071769.5925
Colorectal cancerAustria64350.001090748049880.001129328579570.5768388754592005267.8441
Type II diabetesSweden53920.001201069276630.001089583790550.7655373907842339979.2381
Type II diabetesChina1831850.0005318726620430.0003660520498910.8488557750252743890.6772
Rheumatoid arthritisChina127980.0002632535341370.001026378288810.9773142904262944498.1892
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382