MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-12-09 23:15:12 PST
Job id & description: 2304, >WP_090173699.1 SDR family oxidoreductase [Eubacterium oxidoreducens]
Query type: protein
Count queries & homologs: 1, 11
Min % identity & max e-value: 50%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
WP_090173699.12887363CompleteK00065;K00540COG1028unknownunknown100.089.1977.57
WP_090173699.13404385CompleteK00065;K00540COG1028unknownunknown100.0100.076.84
WP_090173699.13293129Lack 5'-endK00065;K00540COG1028unknownunknown100.097.4276.84
WP_090173699.13396196CompleteK00065;K00540COG1028unknownunknown100.0100.076.1
WP_090173699.13327591Lack 5'-endK00065;K00540COG1028unknownunknown100.098.1476.47
WP_090173699.13398091CompleteK00065;K00540COG1028unknownunknown100.0100.076.84
WP_090173699.13319219CompleteK00065;K00540COG1028unknownunknown99.2699.2672.59
WP_090173699.13264254CompleteK00065;K00540COG1028unknownunknown100.097.0670.22
WP_090173699.14469274Lack 5'-endK00065;K00540COG1028unknownunknown80.51100.077.17
WP_090173699.14153091Lack 3'-endK00046COG1028unknownunknown77.2193.3679.62
WP_090173699.13289938CompleteK00065;K00540COG1028unknownunknown100.097.4261.76
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
genusFlavonifractor0.4968.26e-1171.95e-114
speciesFlavonifractor_plautii0.4968.26e-1171.95e-114
speciesClostridium_bolteae0.484.02e-1086.32e-106
familyClostridiales_noname0.4593.17e-983.74e-96
genusEggerthella0.4411.29e-891.22e-87
speciesEggerthella_unclassified0.4331.78e-861.4e-84
speciesClostridium_symbiosum0.4214.63e-813.12e-79
speciesClostridium_hathewayi0.4092.36e-761.39e-74
speciesClostridiales_bacterium_1_7_47FAA0.3882.5e-681.31e-66
genusBlautia0.3772.25e-641.06e-62
speciesClostridium_clostridioforme0.3662.75e-601.18e-58
familyClostridiaceae0.362.4e-589.44e-57
speciesClostridium_citroniae0.3581.08e-573.92e-56
speciesRuminococcus_gnavus0.3572.8e-579.44e-56
genusClostridium0.3534.88e-561.54e-54
speciesClostridium_asparagiforme0.3473.88e-541.14e-52
genusCoprobacillus0.3378.69e-512.41e-49
speciesEggerthella_lenta0.3322.81e-497.37e-48
speciesAnaerotruncus_colihominis0.3314.89e-491.21e-47
speciesRuminococcus_torques0.3252.72e-476.42e-46
genusClostridiales_noname0.3168.99e-452.02e-43
speciesLachnospiraceae_bacterium_1_4_56FAA0.3152.68e-445.75e-43
speciesCoprobacillus_unclassified0.3143.76e-447.72e-43
speciesLachnospiraceae_bacterium_5_1_57FAA0.3027.83e-411.54e-39
speciesErysipelotrichaceae_bacterium_2_2_44A0.2955.52e-391.04e-37
speciesBlautia_producta0.2798.17e-351.48e-33
speciesClostridium_ramosum0.2758.42e-341.47e-32
genusHoldemania0.2716.89e-331.16e-31
speciesAnaerostipes_unclassified0.2684e-326.51e-31
genusLachnospiraceae_noname0.262.76e-304.34e-29
speciesLachnospiraceae_bacterium_9_1_43BFAA0.2513.6e-285.48e-27
speciesBlautia_hydrogenotrophica0.2431.48e-262.18e-25
speciesErysipelotrichaceae_bacterium_6_1_450.2364.41e-256.31e-24
orderCoriobacteriales0.2323.27e-244.41e-23
familyCoriobacteriaceae0.2323.27e-244.41e-23
genusAnaerostipes0.2323.51e-244.6e-23
speciesLachnospiraceae_bacterium_2_1_58FAA0.2281.45e-231.85e-22
speciesLachnospiraceae_bacterium_6_1_63FAA0.2249.29e-231.15e-21
familyOscillospiraceae0.2232.05e-222.42e-21
genusOscillibacter0.2232.05e-222.42e-21
speciesEubacterium_dolichum0.2172.23e-212.57e-20
speciesHaemophilus_parainfluenzae-0.2112.85e-203.2e-19
genusHaemophilus-0.2113.47e-203.81e-19
orderPasteurellales-0.2095.86e-206.15e-19
familyPasteurellaceae-0.2095.86e-206.15e-19
speciesOscillibacter_unclassified0.2088.35e-208.57e-19
speciesCoprococcus_sp_ART55_1-0.2089.58e-209.62e-19
speciesSubdoligranulum_sp_4_3_54A2FAA0.2071.81e-191.78e-18
genusClostridiaceae_noname0.2045.38e-195.08e-18
speciesClostridiaceae_bacterium_JC1180.2045.38e-195.08e-18
speciesLachnospiraceae_bacterium_5_1_63FAA0.2045.63e-195.21e-18
speciesAlistipes_senegalensis-0.2036.4e-195.81e-18
genusBilophila0.2036.68e-195.95e-18
speciesBilophila_unclassified0.22.31e-182.02e-17
speciesEubacterium_ramulus0.1986.24e-185.36e-17
speciesClostridium_sp_ATCC_BAA_4420.1978.88e-187.48e-17
speciesEubacterium_sp_3_1_310.1951.59e-171.32e-16
genusGordonibacter0.1942.85e-172.28e-16
speciesGordonibacter_pamelaeae0.1942.85e-172.28e-16
speciesRuminococcus_sp_5_1_39BFAA0.1934.08e-173.21e-16
speciesLachnospiraceae_bacterium_7_1_58FAA0.1924.61e-173.57e-16
speciesBilophila_wadsworthia0.1918.68e-176.61e-16
classDeltaproteobacteria0.1882.78e-162.02e-15
orderDesulfovibrionales0.1882.78e-162.02e-15
familyDesulfovibrionaceae0.1882.78e-162.02e-15
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1873.19e-162.28e-15
speciesEubacterium_hallii0.1822.26e-151.59e-14
phylumActinobacteria0.1795.91e-154.04e-14
classActinobacteria0.1795.91e-154.04e-14
speciesErysipelotrichaceae_bacterium_21_30.1752.87e-141.94e-13
speciesEubacterium_limosum0.1743.59e-142.39e-13
speciesClostridium_nexile0.1727.62e-145e-13
speciesLactobacillus_ruminis-0.1673.59e-132.32e-12
speciesErysipelotrichaceae_bacterium_3_1_530.1665.6e-133.57e-12
speciesEubacterium_biforme-0.1622.11e-121.33e-11
classErysipelotrichia0.1612.27e-121.37e-11
orderErysipelotrichales0.1612.27e-121.37e-11
familyErysipelotrichaceae0.1612.27e-121.37e-11
familyBacteroidaceae0.1577.83e-124.62e-11
genusBacteroides0.1577.83e-124.62e-11
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.1578.37e-124.88e-11
familyPrevotellaceae-0.1561.03e-115.93e-11
speciesHoldemania_filiformis0.1561.37e-117.79e-11
familyBacteroidales_noname-0.1515.93e-113.25e-10
genusBacteroidales_noname-0.1515.93e-113.25e-10
speciesBacteroidales_bacterium_ph8-0.1515.93e-113.25e-10
genusActinomyces0.1499.74e-115.28e-10
speciesEscherichia_coli0.1481.13e-106.06e-10
speciesAlistipes_shahii-0.1481.31e-106.95e-10
genusButyrivibrio-0.1471.48e-107.76e-10
familyActinomycetaceae0.1471.69e-108.77e-10
genusEscherichia0.1471.79e-109.18e-10
familyStreptococcaceae0.1462.34e-101.19e-09
genusStreptococcus0.1462.52e-101.27e-09
speciesEubacterium_eligens-0.1444.22e-102.1e-09
speciesBacteroides_fragilis0.1435.77e-102.84e-09
speciesMethanobrevibacter_smithii-0.1427.49e-103.64e-09
genusSolobacterium0.1354.94e-092.36e-08
speciesSolobacterium_moorei0.1354.94e-092.36e-08
classMethanobacteria-0.1345.28e-092.44e-08
orderMethanobacteriales-0.1345.28e-092.44e-08
familyMethanobacteriaceae-0.1345.28e-092.44e-08
familyClostridiales_Family_XI_Incertae_Sedis0.1346.12e-092.8e-08
genusMethanobrevibacter-0.1346.62e-093e-08
speciesMitsuokella_unclassified-0.1338.02e-093.61e-08
genusMitsuokella-0.1321.01e-084.5e-08
speciesButyrivibrio_crossotus-0.1311.33e-085.87e-08
familyFusobacteriaceae0.131.51e-086.6e-08
phylumEuryarchaeota-0.131.74e-087.53e-08
speciesRuminococcus_obeum0.1292.11e-089.05e-08
familyBacillales_noname0.1292.26e-089.52e-08
genusGemella0.1292.26e-089.52e-08
genusFusobacterium0.1282.55e-081.07e-07
speciesClostridium_sp_KLE_17550.1273.7e-081.53e-07
phylumFusobacteria0.1248.11e-083.27e-07
classFusobacteriia0.1248.11e-083.27e-07
orderFusobacteriales0.1248.11e-083.27e-07
genusOxalobacter-0.1231.02e-074.05e-07
speciesOxalobacter_formigenes-0.1231.02e-074.05e-07
speciesFusobacterium_ulcerans0.1231.04e-074.09e-07
speciesCoprococcus_eutactus-0.1221.08e-074.21e-07
speciesHoldemania_sp_AP20.1221.26e-074.87e-07
speciesCoriobacteriaceae_bacterium_phI0.1221.35e-075.18e-07
genusCoriobacteriaceae_noname0.1211.47e-075.6e-07
speciesAnaerostipes_hadrus0.1211.69e-076.38e-07
speciesDorea_formicigenerans0.121.9e-077.1e-07
speciesOdoribacter_splanchnicus-0.121.91e-077.1e-07
speciesStreptococcus_thermophilus0.121.93e-077.12e-07
familyOxalobacteraceae-0.1192.32e-078.49e-07
genusRuminococcus0.1192.54e-079.22e-07
speciesRuminococcus_callidus-0.1192.73e-079.84e-07
genusPeptoniphilus0.1183.22e-071.15e-06
speciesLactobacillus_delbrueckii0.1183.42e-071.21e-06
speciesClostridium_leptum0.1165.34e-071.88e-06
speciesClostridium_bartlettii0.1155.54e-071.94e-06
genusBarnesiella-0.1155.78e-071.99e-06
speciesBarnesiella_intestinihominis-0.1155.78e-071.99e-06
genusOdoribacter-0.1155.93e-072.03e-06
speciesParaprevotella_unclassified-0.1155.97e-072.03e-06
speciesOscillibacter_sp_KLE_17450.1156.07e-072.05e-06
genusParaprevotella-0.1156.82e-072.28e-06
orderEnterobacteriales0.1147.15e-072.36e-06
familyEnterobacteriaceae0.1147.15e-072.36e-06
speciesRoseburia_hominis-0.1147.42e-072.43e-06
speciesLachnospiraceae_bacterium_8_1_57FAA-0.1147.69e-072.5e-06
speciesEubacterium_rectale-0.1147.8e-072.52e-06
orderBacillales0.1139.64e-073.1e-06
genusPeptostreptococcus0.1131.07e-063.41e-06
speciesPrevotella_bivia0.1121.23e-063.9e-06
speciesEubacterium_siraeum-0.1121.24e-063.9e-06
speciesPrevotella_copri-0.1121.28e-064e-06
speciesParaprevotella_xylaniphila-0.1111.52e-064.72e-06
speciesLachnospiraceae_bacterium_2_1_46FAA0.1111.56e-064.81e-06
speciesStreptococcus_australis0.111.84e-065.64e-06
speciesLachnospiraceae_bacterium_1_1_57FAA0.1092.5e-067.61e-06
speciesHoldemania_unclassified0.1083.05e-069.23e-06
speciesClostridium_sp_L2_50-0.1073.26e-069.8e-06
genusPrevotella-0.1064.12e-061.23e-05
speciesMitsuokella_multacida-0.1064.3e-061.28e-05
genusCatenibacterium-0.1055.09e-061.49e-05
speciesCatenibacterium_mitsuokai-0.1055.09e-061.49e-05
genusPhascolarctobacterium-0.1055.38e-061.56e-05
speciesPhascolarctobacterium_succinatutens-0.1055.38e-061.56e-05
speciesFusobacterium_varium0.1055.59e-061.61e-05
genusButyricicoccus0.1046.86e-061.95e-05
speciesButyricicoccus_pullicaecorum0.1046.86e-061.95e-05
genusFaecalibacterium-0.1037.99e-062.24e-05
speciesFaecalibacterium_prausnitzii-0.1037.99e-062.24e-05
orderBifidobacteriales0.1038.16e-062.27e-05
familyBifidobacteriaceae0.1038.16e-062.27e-05
speciesParaprevotella_clara-0.1029.37e-062.58e-05
speciesBifidobacterium_longum0.1029.39e-062.58e-05
genusAdlercreutzia0.1029.8e-062.66e-05
speciesAdlercreutzia_equolifaciens0.1029.8e-062.66e-05
speciesBacteroides_ovatus0.1029.95e-062.68e-05
genusBifidobacterium0.1011.17e-053.12e-05
speciesAlistipes_putredinis-0.1011.17e-053.12e-05
speciesAlistipes_finegoldii-0.0991.66e-054.4e-05
genusMethanosphaera-0.0991.84e-054.82e-05
speciesMethanosphaera_stadtmanae-0.0991.84e-054.82e-05
genusDorea0.0982.03e-055.29e-05
speciesStreptococcus_salivarius0.0982.07e-055.37e-05
orderLactobacillales0.0972.52e-056.5e-05
classBacilli0.0972.55e-056.54e-05
speciesSutterella_wadsworthensis-0.0963.45e-058.8e-05
speciesPropionibacterium_freudenreichii0.0953.75e-059.52e-05
genusRuminococcaceae_noname0.0953.85e-059.67e-05
speciesRuminococcaceae_bacterium_D160.0953.85e-059.67e-05
speciesPrevotella_stercorea-0.0935.13e-050.000128
genusCoprobacter-0.0926.68e-050.000165
speciesCoprobacter_fastidiosus-0.0926.68e-050.000165
genusErysipelotrichaceae_noname0.0927.08e-050.000174
speciesLactococcus_lactis0.0918.37e-050.000205
orderActinomycetales0.0918.57e-050.000209
speciesDialister_invisus0.099.12e-050.000221
familyPeptostreptococcaceae0.090.0001050.000253
genusLeuconostoc0.0890.0001140.000273
genusParvimonas0.0890.0001170.000279
speciesParvimonas_unclassified0.0890.0001190.000281
speciesRuminococcus_champanellensis-0.0890.0001190.000281
familyEnterococcaceae0.0890.000120.000282
speciesStreptococcus_sanguinis0.0880.0001290.000301
speciesBacteroides_coprophilus-0.0880.0001460.000339
genusEnterococcus0.0870.0001640.000379
speciesBifidobacterium_angulatum-0.0870.000180.000414
genusSutterella-0.0850.0002280.000522
genusActinobacillus-0.0850.0002490.000565
speciesActinobacillus_unclassified-0.0850.0002490.000565
genusCoprococcus-0.0850.0002520.000569
genusLactococcus0.0840.0002550.000573
speciesAnaerotruncus_unclassified-0.0840.0002660.000595
familySutterellaceae-0.0840.0002880.000641
speciesCollinsella_tanakaei0.0830.0003140.000696
speciesCoprobacillus_sp_29_10.0820.0003640.000803
speciesGemella_morbillorum0.0820.000390.000856
familyLachnospiraceae0.0820.0004040.000883
speciesStreptococcus_mutans0.0810.0004790.00104
genusAnaerotruncus0.080.0005750.00124
speciesEscherichia_unclassified0.0780.0007420.0016
speciesMethanobrevibacter_unclassified-0.0780.0007750.00166
speciesCollinsella_intestinalis0.0770.0008180.00175
speciesDesulfovibrio_piger-0.0760.0009440.00201
speciesVeillonella_unclassified-0.0760.0009680.00205
speciesBacteroides_thetaiotaomicron0.0760.001080.00228
genusPeptostreptococcaceae_noname0.0750.001090.00228
speciesKlebsiella_unclassified0.0750.001090.00228
speciesBacteroides_pectinophilus-0.0750.001130.00235
speciesMegasphaera_elsdenii-0.0750.001230.00255
speciesBifidobacterium_pseudocatenulatum0.0740.001280.00264
speciesEnterococcus_faecalis0.0740.00130.00267
speciesCampylobacter_concisus-0.0730.001640.00335
speciesPeptostreptococcus_anaerobius0.0720.001710.00348
speciesPorphyromonas_uenonis0.0720.001810.00367
orderBurkholderiales-0.0710.002170.00438
classBetaproteobacteria-0.0710.002230.00448
speciesBacteroides_uniformis0.070.002560.00512
speciesCoprococcus_catus-0.0690.002830.00564
speciesBifidobacterium_adolescentis-0.0670.003940.00781
speciesLactobacillus_plantarum0.0670.003990.00788
familyLeuconostocaceae0.0660.004380.0086
genusMorganella0.0660.004410.0086
speciesMorganella_morganii0.0660.004410.0086
speciesPeptostreptococcus_stomatis0.0660.004490.00872
speciesVeillonella_atypica-0.0650.005060.00979
genusPorphyromonas0.0650.005170.00996
speciesStreptococcus_parasanguinis0.0640.00530.0102
speciesPeptostreptococcaceae_noname_unclassified-0.0640.005520.0105
speciesSubdoligranulum_unclassified-0.0630.006460.0123
speciesParabacteroides_sp_D13-0.0620.007220.0137
speciesParabacteroides_distasonis0.0620.007390.014
speciesRoseburia_inulinivorans-0.0610.008010.0151
genusParabacteroides0.060.0090.0169
speciesOlsenella_unclassified-0.060.009370.0175
speciesPorphyromonas_asaccharolytica0.060.009910.0184
genusDialister0.0590.01010.0187
speciesLactococcus_phage_bIL670.0590.01030.019
speciesStreptococcus_phage_Sfi210.0590.01110.0204
speciesStreptococcus_mitis_oralis_pneumoniae0.0590.01120.0205
speciesClostridium_spiroforme0.0580.01250.0228
genusTuricibacter-0.0570.0140.0254
speciesStreptococcus_anginosus0.0560.01520.0275
genusVeillonella-0.0560.01540.0277
speciesAlistipes_unclassified0.0560.01570.0282
phylumProteobacteria0.0560.01590.0284
speciesBacteroides_oleiciplenus0.0550.01730.0308
speciesMegamonas_funiformis-0.0550.01790.0318
speciesCoprobacillus_sp_D60.0530.02140.0377
speciesBacteroides_plebeius-0.0530.02140.0377
genusPropionibacterium0.0530.02240.0393
speciesBifidobacterium_animalis0.0530.02310.0404
classGammaproteobacteria0.0520.02330.0406
speciesCollinsella_unclassified0.0520.02540.0441
genusAcidaminococcus0.0510.02620.0453
orderAeromonadales-0.0510.02740.0472
speciesParabacteroides_merdae-0.0510.02810.0482
speciesTuricibacter_sanguinis-0.0510.02850.0487
speciesSutterella_parvirubra0.050.02930.0499
genusAggregatibacter-0.050.02940.0499
speciesOdoribacter_laneus0.050.02960.0501
genusSubdoligranulum-0.050.03130.0528
speciesVeillonella_dispar-0.0490.03280.0548
genusButyricimonas-0.0490.03310.0548
speciesButyricimonas_synergistica-0.0490.03310.0548
classNegativicutes-0.0490.03330.0548
orderSelenomonadales-0.0490.03330.0548
genusSuccinatimonas-0.0490.03330.0548
speciesSuccinatimonas_hippei-0.0490.03330.0548
speciesAcidaminococcus_unclassified0.0490.03440.0564
speciesTuricibacter_unclassified-0.0490.03460.0565
speciesParabacteroides_unclassified0.0480.03770.0613
familyAcidaminococcaceae-0.0480.03780.0613
speciesLactobacillus_casei_paracasei0.0480.03820.0617
speciesAlistipes_sp_HGB5-0.0480.03890.0627
speciesLactobacillus_mucosae-0.0480.03920.0627
speciesAlistipes_sp_AP110.0480.03920.0627
genusPantoea0.0480.03990.0634
speciesPantoea_unclassified0.0480.03990.0634
speciesStreptococcus_vestibularis0.0470.04270.0673
classClostridia0.0470.04280.0673
orderClostridiales0.0470.04280.0673
speciesDialister_succinatiphilus-0.0450.050.0784
familySuccinivibrionaceae-0.0450.05030.0786
speciesEnterococcus_faecium0.0440.05550.0865
speciesBacteroides_intestinalis-0.0440.05750.0893
speciesRuminococcus_lactaris-0.0440.05850.0904
speciesButyrivibrio_unclassified-0.0440.05860.0904
speciesHaemophilus_paraphrohaemolyticus-0.0430.06150.0946
speciesVeillonella_parvula-0.0430.0640.0981
speciesStreptococcus_pasteurianus0.0420.07050.108
genusSlackia0.0420.07140.109
familyRikenellaceae-0.0410.07460.113
genusAlistipes-0.0410.07460.113
genusPseudoflavonifractor0.040.0830.125
speciesPseudoflavonifractor_capillosus0.040.0830.125
speciesStreptococcus_infantarius0.0390.09290.139
genusParasutterella-0.0380.09630.143
speciesParasutterella_excrementihominis-0.0380.09630.143
genusOlsenella-0.0380.09640.143
speciesBacteroides_salyersiae0.0380.09890.146
genusTunalikevirus-0.0380.1010.149
speciesClostridium_perfringens-0.0380.1040.153
speciesBacteroides_salanitronis-0.0370.1060.155
speciesStreptococcus_gordonii0.0370.1120.164
speciesRoseburia_unclassified-0.0360.1220.177
speciesRoseburia_intestinalis-0.0360.1220.177
genusSiphoviridae_noname0.0350.1250.18
speciesPrevotella_buccae-0.0360.1250.18
phylumBacteroidetes-0.0350.1260.18
classBacteroidia-0.0350.1260.18
orderBacteroidales-0.0350.1260.18
speciesHaemophilus_sputorum-0.0350.1280.183
familyPropionibacteriaceae0.0350.1290.183
speciesLactobacillus_acidophilus0.0350.1330.188
speciesAggregatibacter_segnis-0.0350.1330.188
speciesLactococcus_phage_jm20.0340.1390.196
speciesBacteroides_dorei0.0330.1490.209
genusCollinsella0.0330.1550.216
speciesParabacteroides_johnsonii0.0330.1550.216
speciesSlackia_piriformis0.0320.1640.228
speciesBifidobacterium_catenulatum-0.0310.1790.248
speciesBifidobacterium_breve0.0310.180.249
speciesBacteroides_sp_3_1_190.0310.1850.255
speciesEggerthella_sp_1_3_56FAA0.030.1880.259
speciesBacteroides_sp_4_3_47FAA-0.030.1890.259
genusSutterellaceae_unclassified-0.030.1930.264
speciesCoprococcus_comes0.030.1940.265
genusRoseburia-0.030.20.272
speciesKlebsiella_phage_KP36-0.0290.2070.281
speciesParabacteroides_goldsteinii0.0280.2330.315
speciesBacteroides_clarus0.0270.2390.322
speciesAcidaminococcus_intestini0.0270.240.323
speciesEnterobacteria_phage_HK5440.0270.2520.338
speciesEnterobacter_cloacae-0.0260.2590.346
familyEubacteriaceae-0.0250.2830.377
genusEubacterium-0.0250.2850.379
speciesLactobacillus_rhamnosus0.0250.2880.382
speciesBacteroides_faecis-0.0250.2890.382
speciesBacteroides_stercoris0.0240.2940.388
speciesLactococcus_phage_936_sensu_lato-0.0240.2970.39
classEpsilonproteobacteria-0.0240.3050.399
orderCampylobacterales-0.0240.3050.399
speciesMegamonas_hypermegale-0.0230.3130.408
speciesFusobacterium_nucleatum0.0230.3160.411
genusMegasphaera-0.0230.3210.416
familyStaphylococcaceae0.0230.3290.425
speciesKlebsiella_oxytoca-0.0220.3380.435
genusEnterobacter-0.0220.3390.435
genusKlebsiella0.0220.3390.435
familyPodoviridae-0.0210.3590.459
genusLambdalikevirus0.0210.3630.463
speciesWeissella_confusa-0.020.3790.482
speciesProteus_mirabilis0.020.3970.504
speciesBifidobacterium_dentium0.0190.4010.507
phylumFirmicutes0.0190.4090.515
familyVeillonellaceae-0.0190.4090.515
speciesStreptococcus_lutetiensis0.0190.4160.522
speciesBacteroides_sp_1_1_60.0190.4170.522
genusCampylobacter-0.0180.4370.546
speciesCollinsella_aerofaciens-0.0180.440.548
speciesLeuconostoc_lactis0.0180.4410.548
familyCampylobacteraceae-0.0170.4680.58
speciesCitrobacter_unclassified-0.0170.4740.586
speciesLactobacillus_crispatus0.0160.480.592
speciesOdoribacter_unclassified0.0160.4840.595
speciesBacteroides_caccae-0.0160.4860.596
speciesBacteroides_xylanisolvens0.0160.4910.6
speciesDesulfovibrio_desulfuricans0.0160.4920.6
speciesLactococcus_garvieae0.0160.4930.6
familyPorphyromonadaceae0.0160.4950.601
genusStaphylococcus0.0150.5140.622
speciesMegasphaera_unclassified-0.0150.5190.627
speciesLactobacillus_gasseri0.0150.5250.632
speciesBacteroides_massiliensis-0.0140.5330.64
speciesBacteroides_cellulosilyticus-0.0140.5490.658
speciesBacteroides_barnesiae-0.0140.5510.658
speciesEnterobacter_aerogenes-0.0130.5630.671
genusMyoviridae_noname0.0130.5670.674
familyRuminococcaceae-0.0130.5730.68
genusDesulfovibrio-0.0130.5750.68
speciesLactococcus_phage_P6800.0130.5770.681
speciesLactococcus_phage_phi7-0.0130.5850.689
familyViruses_noname-0.0120.6060.71
genusViruses_noname-0.0120.6060.71
orderViruses_noname0.0110.6290.734
speciesLactobacillus_amylovorus0.0110.630.734
speciesRuminococcus_bromii0.0110.6330.736
speciesLachnospiraceae_bacterium_3_1_46FAA0.0110.6430.746
genusWeissella0.010.660.764
familySiphoviridae0.010.6680.771
speciesBacteroides_eggerthii-0.010.6730.775
genusRothia0.010.6760.776
speciesKlebsiella_pneumoniae0.0090.6820.781
speciesLactobacillus_vaginalis0.0090.690.788
familyMicrococcaceae0.0090.6910.788
speciesLactobacillus_salivarius-0.0080.7170.815
genusC2likevirus0.0070.7480.849
speciesOscillibacter_sp_KLE_1728-0.0070.7550.849
speciesBacteroides_nordii0.0070.7580.849
speciesParabacteroides_sp_20_3-0.0070.7590.849
speciesMegasphaera_micronuciformis0.0070.7590.849
speciesBacteroides_coprocola-0.0070.760.849
phylumVerrucomicrobia-0.0070.7690.849
classVerrucomicrobiae-0.0070.7690.849
orderVerrucomicrobiales-0.0070.7690.849
familyVerrucomicrobiaceae-0.0070.7690.849
genusAkkermansia-0.0070.7690.849
speciesAkkermansia_muciniphila-0.0070.7690.849
genusProteus0.0070.770.849
speciesLactobacillus_fermentum-0.0060.7790.857
speciesEubacterium_ventriosum-0.0060.7840.861
speciesC2likevirus_unclassified0.0060.7880.861
speciesFusobacterium_mortiferum0.0060.7880.861
speciesBacteroides_vulgatus-0.0060.8080.881
speciesBacteroides_finegoldii-0.0050.8140.885
speciesBacteroides_sp_2_1_22-0.0050.8350.899
phylumSynergistetes-0.0050.8360.899
classSynergistia-0.0050.8360.899
orderSynergistales-0.0050.8360.899
familySynergistaceae-0.0050.8360.899
genusAcidaminococcaceae_unclassified0.0050.840.9
genusLactobacillus-0.0050.8410.9
orderCaudovirales0.0040.8550.913
familyBurkholderiales_noname-0.0040.8580.914
speciesLactobacillus_oris0.0040.8640.918
speciesBacteroides_fluxus-0.0040.8660.918
speciesRuminococcus_sp_JC3040.0040.8670.918
orderPseudomonadales-0.0040.8690.918
genusBurkholderiales_noname-0.0040.8730.918
speciesBurkholderiales_bacterium_1_1_47-0.0040.8730.918
speciesLactobacillus_reuteri-0.0040.8750.918
speciesRothia_mucilaginosa0.0030.8810.922
speciesCitrobacter_freundii0.0030.8840.923
speciesAlistipes_indistinctus-0.0030.9120.949
speciesDorea_longicatena0.0030.9130.949
speciesWeissella_cibaria0.0020.9160.95
speciesAcidaminococcus_fermentans0.0020.9270.96
speciesKlebsiella_sp_MS_92_3-0.0020.930.961
speciesDorea_unclassified0.0020.9340.963
speciesAlistipes_onderdonkii0.0020.940.967
familyMyoviridae-0.0010.9530.972
phylumViruses_noname0.0010.9540.972
classViruses_noname0.0010.9540.972
speciesLactobacillus_sanfranciscensis-0.0010.9540.972
familyLactobacillaceae0.0010.9560.972
speciesMegamonas_rupellensis-0.0010.9630.977
speciesBifidobacterium_bifidum-0.0010.9770.984
genusCitrobacter0.0010.9780.984
speciesMegamonas_unclassified-0.0010.9780.984
genusPyramidobacter-0.0010.980.984
speciesPyramidobacter_piscolens-0.0010.980.984
genusMegamonas0.00.9850.987
speciesEubacterium_cylindroides0.00.9950.995
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.008755420370910.003428459612897.28107516274e-066822.26766
Type II diabetesChina1831850.004910860609750.004016239994420.00819790537757345711.4247
Ulcerative colitisSpain78660.003837233266310.003428459612890.045520315754453814.97
ObesityDenmark1691230.001735574960130.001349681739390.0606416670386551918.148
Rheumatoid arthritisChina127980.003209123801890.00264408250340.118647999149602720.0987
Type II diabetesDenmark752770.001991920634760.00158312880410.1296319752951073935.2018
Colorectal cancerAustria64350.005601096590630.003281509656230.234289423321997133.736
Type II diabetesSweden53920.003999038203250.003607911382650.6699119169142065969.9594
Liver cirrhosisChina1201140.003054226218880.002594206175550.980899068432918798.0449
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382