MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-12-10 17:02:31 PST
Job id & description: 2308, >AGS82960.1 chalcone isomerase [Eubacterium ramulus]
Query type: protein
Count queries & homologs: 1, 14
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
AGS82960.12981480Lack 5'-endunknownunknownunknownunknown100.097.5999.65
AGS82960.13093944Completeunknownunknownunknownunknown100.0100.099.29
AGS82960.13019378Lack 5'-endunknownunknownunknownunknown100.098.2699.29
AGS82960.13095314Completeunknownunknownunknownunknown100.0100.098.59
AGS82960.13161134Completeunknownunknownunknownunknown98.5998.9250.18
AGS82960.13148025Lack 5'-endunknownunknownunknownunknown100.099.6447.7
AGS82960.12885796Completeunknownunknownunknownunknown100.094.2648.06
AGS82960.12700061Completeunknownunknownunknownunknown100.090.5847.35
AGS82960.12986836Completeunknownunknownunknownunknown98.2398.2847.02
AGS82960.12986773Completeunknownunknownunknownunknown98.2398.2845.61
AGS82960.13083857Completeunknownunknownunknownunknown98.2397.5448.4
AGS82960.13182984Completeunknownunknownunknownunknown97.17100.042.4
AGS82960.13115958Lack 3'-endunknownunknownunknownunknown87.9987.9947.01
AGS82960.12269415Completeunknownunknownunknownunknown99.2980.5937.01
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
genusFlavonifractor0.4892.99e-1137.06e-111
speciesFlavonifractor_plautii0.4892.99e-1137.06e-111
genusEggerthella0.4271.34e-832.11e-81
speciesClostridium_bolteae0.4233.25e-823.83e-80
speciesEggerthella_unclassified0.4192e-801.89e-78
familyClostridiales_noname0.3971.35e-711.06e-69
speciesClostridium_symbiosum0.383.91e-652.64e-63
genusBlautia0.3611.42e-588.38e-57
speciesClostridium_hathewayi0.3551.67e-568.76e-55
speciesClostridium_citroniae0.3391.52e-517.17e-50
speciesClostridiales_bacterium_1_7_47FAA0.3338.67e-503.72e-48
speciesEggerthella_lenta0.3291.83e-487.2e-47
speciesRuminococcus_gnavus0.3285.05e-481.83e-46
speciesAnaerotruncus_colihominis0.3191.27e-454.28e-44
speciesRuminococcus_torques0.3121.82e-435.73e-42
speciesClostridium_asparagiforme0.3035.75e-411.7e-39
familyClostridiaceae0.2989.04e-402.51e-38
speciesLachnospiraceae_bacterium_1_4_56FAA0.2971.98e-395.19e-38
genusCoprobacillus0.2924.98e-381.24e-36
speciesClostridium_clostridioforme0.2925.69e-381.34e-36
genusClostridium0.2911e-372.25e-36
genusHoldemania0.2724.65e-339.98e-32
speciesCoprobacillus_unclassified0.2691.78e-323.65e-31
genusClostridiales_noname0.2611.46e-302.87e-29
speciesEubacterium_ramulus0.2611.89e-303.57e-29
genusLachnospiraceae_noname0.2545.41e-299.82e-28
speciesLachnospiraceae_bacterium_5_1_57FAA0.2449.58e-271.67e-25
speciesErysipelotrichaceae_bacterium_2_2_44A0.2413.27e-265.51e-25
speciesLachnospiraceae_bacterium_9_1_43BFAA0.236.69e-241.09e-22
speciesLachnospiraceae_bacterium_5_1_63FAA0.238.95e-241.41e-22
speciesBlautia_hydrogenotrophica0.2273.21e-234.89e-22
speciesBlautia_producta0.2213.92e-225.78e-21
speciesAnaerostipes_unclassified0.2214.15e-225.94e-21
speciesClostridium_ramosum0.2191.2e-211.67e-20
speciesLachnospiraceae_bacterium_6_1_63FAA0.2181.32e-211.78e-20
genusAnaerostipes0.2146.84e-218.97e-20
speciesLachnospiraceae_bacterium_2_1_58FAA0.2121.82e-202.32e-19
speciesAlistipes_senegalensis-0.2113.24e-204.02e-19
genusGordonibacter0.2113.49e-204.12e-19
speciesGordonibacter_pamelaeae0.2113.49e-204.12e-19
speciesErysipelotrichaceae_bacterium_6_1_450.2062.55e-192.94e-18
orderCoriobacteriales0.2053.11e-193.41e-18
familyCoriobacteriaceae0.2053.11e-193.41e-18
speciesCoprococcus_sp_ART55_1-0.2037.18e-197.7e-18
speciesEubacterium_dolichum0.23.03e-183.18e-17
speciesRuminococcus_sp_5_1_39BFAA0.1978.97e-189.2e-17
speciesMethanobrevibacter_smithii-0.1961.37e-171.38e-16
speciesEubacterium_sp_3_1_310.1916.67e-176.56e-16
genusBilophila0.191.01e-169.73e-16
classMethanobacteria-0.191.29e-161.17e-15
orderMethanobacteriales-0.191.29e-161.17e-15
familyMethanobacteriaceae-0.191.29e-161.17e-15
speciesClostridium_sp_ATCC_BAA_4420.1891.51e-161.34e-15
genusMethanobrevibacter-0.1882.14e-161.87e-15
speciesEubacterium_hallii0.1882.53e-162.17e-15
speciesBilophila_unclassified0.1873.34e-162.82e-15
familyOscillospiraceae0.1849.23e-167.4e-15
genusOscillibacter0.1849.23e-167.4e-15
phylumEuryarchaeota-0.1849.25e-167.4e-15
speciesClostridium_nexile0.1761.61e-141.27e-13
genusClostridiaceae_noname0.1752.23e-141.7e-13
speciesClostridiaceae_bacterium_JC1180.1752.23e-141.7e-13
speciesBilophila_wadsworthia0.1752.84e-142.13e-13
speciesOscillibacter_unclassified0.171.31e-139.66e-13
classDeltaproteobacteria0.1691.87e-131.32e-12
orderDesulfovibrionales0.1691.87e-131.32e-12
familyDesulfovibrionaceae0.1691.87e-131.32e-12
speciesHaemophilus_parainfluenzae-0.1692.14e-131.49e-12
genusHaemophilus-0.1673.18e-132.18e-12
orderPasteurellales-0.1664.43e-132.95e-12
familyPasteurellaceae-0.1664.43e-132.95e-12
genusButyrivibrio-0.1655.99e-133.93e-12
speciesSubdoligranulum_sp_4_3_54A2FAA0.1631.45e-129.38e-12
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.1622.06e-121.31e-11
speciesButyrivibrio_crossotus-0.1612.63e-121.66e-11
phylumActinobacteria0.1594.44e-122.72e-11
classActinobacteria0.1594.44e-122.72e-11
familyBacteroidales_noname-0.1595.38e-123.17e-11
genusBacteroidales_noname-0.1595.38e-123.17e-11
speciesBacteroidales_bacterium_ph8-0.1595.38e-123.17e-11
speciesHoldemania_filiformis0.1542.14e-111.25e-10
familyBacteroidaceae0.1542.4e-111.36e-10
genusBacteroides0.1542.4e-111.36e-10
speciesAlistipes_shahii-0.1532.93e-111.65e-10
speciesEubacterium_siraeum-0.1524.2e-112.33e-10
speciesDorea_formicigenerans0.1515.28e-112.9e-10
speciesLactobacillus_ruminis-0.1498.62e-114.68e-10
familyStreptococcaceae0.1498.78e-114.71e-10
genusStreptococcus0.1481.15e-106.1e-10
speciesLachnospiraceae_bacterium_7_1_58FAA0.1481.39e-107.29e-10
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1471.57e-108.14e-10
speciesEubacterium_limosum0.1471.66e-108.42e-10
speciesRuminococcus_obeum0.1471.66e-108.42e-10
speciesEubacterium_biforme-0.1471.76e-108.84e-10
genusOxalobacter-0.1453.21e-101.58e-09
speciesOxalobacter_formigenes-0.1453.21e-101.58e-09
genusSolobacterium0.1426.56e-103.16e-09
speciesSolobacterium_moorei0.1426.56e-103.16e-09
speciesMitsuokella_unclassified-0.1426.73e-103.21e-09
genusMitsuokella-0.1418.05e-103.8e-09
speciesBacteroides_fragilis0.1418.29e-103.87e-09
speciesLachnospiraceae_bacterium_1_1_57FAA0.1418.39e-103.88e-09
genusRuminococcus0.1411.04e-094.77e-09
familyOxalobacteraceae-0.141.27e-095.76e-09
speciesErysipelotrichaceae_bacterium_3_1_530.1391.41e-096.34e-09
genusActinomyces0.1382.15e-099.57e-09
familyActinomycetaceae0.1372.42e-091.07e-08
speciesCoprococcus_eutactus-0.1337.24e-093.16e-08
speciesClostridium_bartlettii0.1311.32e-085.72e-08
speciesOdoribacter_splanchnicus-0.1292.41e-081.03e-07
familyPrevotellaceae-0.1282.49e-081.06e-07
classErysipelotrichia0.1282.67e-081.11e-07
orderErysipelotrichales0.1282.67e-081.11e-07
familyErysipelotrichaceae0.1282.67e-081.11e-07
speciesEscherichia_coli0.1273.56e-081.46e-07
genusBarnesiella-0.1264.23e-081.71e-07
speciesBarnesiella_intestinihominis-0.1264.23e-081.71e-07
genusEscherichia0.1247.02e-082.79e-07
genusDorea0.1247.04e-082.79e-07
speciesAnaerostipes_hadrus0.1239.61e-083.78e-07
speciesStreptococcus_australis0.1221.12e-074.37e-07
speciesSutterella_wadsworthensis-0.1221.15e-074.45e-07
familyBacillales_noname0.1221.17e-074.45e-07
genusGemella0.1221.17e-074.45e-07
speciesHoldemania_sp_AP20.1221.21e-074.57e-07
genusOdoribacter-0.1221.34e-075.02e-07
speciesStreptococcus_salivarius0.122.06e-077.66e-07
genusPhascolarctobacterium-0.1183.07e-071.12e-06
speciesPhascolarctobacterium_succinatutens-0.1183.07e-071.12e-06
speciesAnaerotruncus_unclassified-0.1183.19e-071.16e-06
speciesEubacterium_eligens-0.1174.24e-071.53e-06
speciesHoldemania_unclassified0.1174.36e-071.56e-06
speciesMethanobrevibacter_unclassified-0.1165.05e-071.79e-06
speciesBacteroides_ovatus0.1147.07e-072.49e-06
orderBacillales0.1147.89e-072.76e-06
speciesLachnospiraceae_bacterium_2_1_46FAA0.1147.97e-072.77e-06
genusSutterella-0.1148.41e-072.9e-06
genusCatenibacterium-0.1138.84e-073e-06
speciesCatenibacterium_mitsuokai-0.1138.84e-073e-06
genusPeptoniphilus0.1121.25e-064.21e-06
familyFusobacteriaceae0.1121.29e-064.32e-06
genusParaprevotella-0.1111.5e-064.99e-06
speciesParaprevotella_unclassified-0.1111.53e-065.05e-06
genusAdlercreutzia0.111.96e-066.38e-06
speciesAdlercreutzia_equolifaciens0.111.96e-066.38e-06
genusFusobacterium0.111.98e-066.4e-06
speciesRoseburia_hominis-0.1092.24e-067.19e-06
speciesMitsuokella_multacida-0.1092.48e-067.91e-06
speciesPrevotella_bivia0.1083.1e-069.82e-06
orderEnterobacteriales0.1073.36e-061.05e-05
familyEnterobacteriaceae0.1073.36e-061.05e-05
phylumFusobacteria0.1073.5e-061.07e-05
classFusobacteriia0.1073.5e-061.07e-05
orderFusobacteriales0.1073.5e-061.07e-05
speciesErysipelotrichaceae_bacterium_21_30.1064.08e-061.24e-05
speciesBifidobacterium_pseudocatenulatum0.1055.53e-061.67e-05
speciesParaprevotella_xylaniphila-0.1055.69e-061.71e-05
speciesAlistipes_putredinis-0.1046.27e-061.87e-05
classBacilli0.1046.61e-061.96e-05
orderLactobacillales0.1046.72e-061.98e-05
familyClostridiales_Family_XI_Incertae_Sedis0.1046.79e-061.99e-05
familyPeptostreptococcaceae0.1037.36e-062.14e-05
speciesOscillibacter_sp_KLE_17450.1037.66e-062.22e-05
speciesPropionibacterium_freudenreichii0.1038.22e-062.37e-05
speciesStreptococcus_sanguinis0.1011.21e-053.46e-05
speciesFusobacterium_ulcerans0.11.47e-054.18e-05
speciesBifidobacterium_longum0.0991.75e-054.95e-05
speciesParaprevotella_clara-0.0982.32e-056.52e-05
speciesRuminococcus_champanellensis-0.0972.56e-057.15e-05
speciesSubdoligranulum_unclassified-0.0963.05e-058.47e-05
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0953.54e-059.77e-05
speciesClostridium_sp_L2_50-0.0953.82e-050.000105
speciesStreptococcus_thermophilus0.0953.85e-050.000105
genusPeptostreptococcaceae_noname0.0953.9e-050.000105
speciesBifidobacterium_adolescentis-0.0953.91e-050.000105
speciesAlistipes_finegoldii-0.0935.14e-050.000138
speciesLactobacillus_delbrueckii0.0935.31e-050.000142
genusMethanosphaera-0.0935.83e-050.000154
speciesMethanosphaera_stadtmanae-0.0935.83e-050.000154
genusPeptostreptococcus0.090.0001030.00027
speciesBifidobacterium_angulatum-0.090.0001040.000271
speciesCoriobacteriaceae_bacterium_phI0.0890.0001270.000328
speciesRuminococcus_callidus-0.0880.0001270.000328
orderBifidobacteriales0.0880.0001380.00035
familyBifidobacteriaceae0.0880.0001380.00035
genusCoriobacteriaceae_noname0.0880.0001380.00035
speciesDesulfovibrio_piger-0.0880.0001410.000356
genusLeuconostoc0.0880.0001480.000372
speciesCollinsella_tanakaei0.0880.000150.000375
genusBifidobacterium0.0870.0001770.00044
genusLactococcus0.0860.0002030.000501
familySutterellaceae-0.0860.0002040.000501
speciesGemella_morbillorum0.0840.0002580.000631
genusSubdoligranulum-0.0840.000290.000706
familyLachnospiraceae0.0840.0002970.000719
speciesBacteroides_thetaiotaomicron0.0820.0003770.000908
orderActinomycetales0.0820.0004130.00099
speciesBacteroides_pectinophilus-0.0810.0004210.001
genusCoprobacter-0.0810.0004350.00103
speciesCoprobacter_fastidiosus-0.0810.0004350.00103
speciesClostridium_sp_KLE_17550.0810.0004610.00108
familyLeuconostocaceae0.080.0005150.0012
speciesBacteroides_coprophilus-0.080.0005530.00129
speciesKlebsiella_unclassified0.0770.0008960.00207
speciesPorphyromonas_uenonis0.0770.0009160.00211
speciesPrevotella_copri-0.0760.0009410.00216
speciesClostridium_leptum0.0760.001060.00242
genusButyricicoccus0.0750.001150.0026
speciesButyricicoccus_pullicaecorum0.0750.001150.0026
speciesLactococcus_lactis0.0750.001220.00274
speciesEubacterium_rectale-0.0730.001630.00365
speciesFusobacterium_varium0.0720.00190.00423
genusParvimonas0.0710.002050.00454
speciesParvimonas_unclassified0.0710.002090.00461
speciesLactobacillus_plantarum0.070.002380.00522
speciesCoprobacillus_sp_29_10.070.002490.00544
speciesOlsenella_unclassified-0.0690.002860.00622
speciesAlistipes_sp_HGB5-0.0680.003270.00708
classBetaproteobacteria-0.0680.003470.00748
genusPrevotella-0.0670.003750.00805
familyAcidaminococcaceae-0.0660.004030.00861
orderBurkholderiales-0.0660.004560.0097
genusPropionibacterium0.0650.004950.0105
speciesParabacteroides_sp_D13-0.0650.005070.0107
genusKlebsiella0.0650.005110.0107
genusCoprococcus-0.0640.005420.0113
speciesEscherichia_unclassified0.0640.005840.0121
speciesStreptococcus_phage_Sfi210.0640.005930.0123
speciesPrevotella_stercorea-0.0640.0060.0124
speciesBifidobacterium_animalis0.0630.00620.0127
speciesPeptostreptococcus_anaerobius0.0630.00630.0129
genusPorphyromonas0.0630.006410.013
speciesCoprococcus_comes0.0630.006460.0131
genusErysipelotrichaceae_noname0.0630.006790.0137
speciesDialister_invisus0.060.009340.0188
speciesBacteroides_stercoris0.0590.01080.0216
genusActinobacillus-0.0590.01110.022
speciesActinobacillus_unclassified-0.0590.01110.022
speciesStreptococcus_anginosus0.0590.01120.0221
speciesCoprobacillus_sp_D60.0580.01160.0228
speciesStreptococcus_mitis_oralis_pneumoniae0.0570.01310.0257
classGammaproteobacteria0.0570.01420.0276
speciesBacteroides_salyersiae0.0570.01420.0276
speciesRoseburia_unclassified-0.0560.01570.0304
familyEnterococcaceae0.0550.01680.0322
speciesParabacteroides_merdae-0.0550.01680.0322
speciesCoprococcus_catus-0.0550.01840.0351
genusFaecalibacterium-0.0540.01850.0351
speciesFaecalibacterium_prausnitzii-0.0540.01850.0351
speciesLactococcus_phage_bIL670.0540.01880.0355
speciesBacteroides_sp_3_1_190.0540.01890.0355
genusOlsenella-0.0540.01920.036
familyPropionibacteriaceae0.0540.02030.0377
genusEnterococcus0.0540.02030.0377
speciesCollinsella_intestinalis0.0530.02150.0398
speciesPeptostreptococcus_stomatis0.0530.02190.0404
speciesMegasphaera_elsdenii-0.0530.02250.0413
phylumProteobacteria0.0530.0230.0418
genusSuccinatimonas-0.0530.0230.0418
speciesSuccinatimonas_hippei-0.0530.0230.0418
speciesStreptococcus_pasteurianus0.0520.02370.0427
speciesStreptococcus_infantarius0.0520.02370.0427
speciesStreptococcus_mutans0.0510.02720.0488
familyRikenellaceae-0.0510.02820.0502
genusAlistipes-0.0510.02820.0502
genusButyricimonas-0.0510.02890.0511
speciesButyricimonas_synergistica-0.0510.02890.0511
familySuccinivibrionaceae-0.050.02920.0514
orderAeromonadales-0.050.02950.0518
speciesParabacteroides_distasonis0.050.03170.0554
speciesCampylobacter_concisus-0.0490.03320.0578
speciesLactobacillus_casei_paracasei0.0490.03350.0581
speciesKlebsiella_pneumoniae0.0490.03440.0595
speciesStreptococcus_parasanguinis0.0480.03610.0622
speciesClostridium_spiroforme0.0480.03650.0626
genusSutterellaceae_unclassified-0.0480.03880.0664
speciesPorphyromonas_asaccharolytica0.0470.04160.0709
speciesBacteroides_oleiciplenus0.0470.0420.0713
speciesBacteroides_salanitronis-0.0470.04250.0719
speciesParabacteroides_johnsonii0.0470.04420.0745
speciesLeuconostoc_lactis0.0460.04540.0763
genusTuricibacter-0.0460.04630.0775
genusAnaerotruncus0.0460.04720.0787
speciesEnterococcus_faecalis0.0460.04840.0804
genusRuminococcaceae_noname0.0450.05180.0855
speciesRuminococcaceae_bacterium_D160.0450.05180.0855
speciesBacteroides_xylanisolvens0.0450.05330.0877
speciesLactobacillus_acidophilus0.0440.05760.0942
speciesTuricibacter_sanguinis-0.0440.05770.0942
speciesLactococcus_garvieae0.0440.05830.0949
genusAggregatibacter-0.0430.06190.1
speciesVeillonella_unclassified-0.0420.06720.109
genusParabacteroides0.0420.07040.113
speciesSlackia_piriformis0.040.08060.129
speciesStreptococcus_vestibularis0.040.08190.131
genusSlackia0.040.08250.132
speciesPeptostreptococcaceae_noname_unclassified-0.040.08610.137
familyStaphylococcaceae0.040.08720.138
speciesFusobacterium_mortiferum0.0390.08810.139
speciesAlistipes_sp_AP110.0390.08890.14
genusDesulfovibrio-0.0390.09080.142
speciesSutterella_parvirubra0.0390.09450.148
speciesTuricibacter_unclassified-0.0380.10.156
speciesLactobacillus_mucosae-0.0380.1020.158
speciesVeillonella_atypica-0.0380.1020.158
speciesCitrobacter_freundii0.0370.1060.164
genusMegamonas0.0370.1080.166
speciesBacteroides_coprocola0.0370.1080.166
genusAcidaminococcus0.0370.1090.166
speciesVeillonella_dispar-0.0370.110.167
speciesMegamonas_unclassified0.0370.110.167
speciesRoseburia_inulinivorans-0.0370.1120.169
classNegativicutes-0.0370.1130.17
orderSelenomonadales-0.0370.1130.17
speciesBifidobacterium_catenulatum-0.0370.1150.172
speciesBacteroides_cellulosilyticus-0.0360.1150.172
speciesStreptococcus_lutetiensis0.0360.120.179
speciesCollinsella_unclassified0.0360.1210.179
speciesMegamonas_rupellensis0.0360.1210.179
genusDialister0.0360.1220.18
speciesDorea_longicatena0.0360.1240.182
classClostridia0.0350.130.19
orderClostridiales0.0350.130.19
speciesAlistipes_unclassified0.0350.1310.191
familyBurkholderiales_noname0.0340.1360.197
speciesOdoribacter_laneus0.0340.1360.197
genusWeissella0.0340.1370.198
genusBurkholderiales_noname0.0340.1390.199
speciesBurkholderiales_bacterium_1_1_470.0340.1390.199
speciesDialister_succinatiphilus-0.0340.1410.201
genusMorganella0.0340.1420.201
speciesButyrivibrio_unclassified-0.0340.1420.201
speciesMorganella_morganii0.0340.1420.201
speciesAcidaminococcus_intestini0.0330.1480.209
speciesRuminococcus_bromii0.0330.150.211
speciesStreptococcus_gordonii0.0330.1550.218
speciesLactobacillus_sanfranciscensis0.0330.1580.221
genusStaphylococcus0.0320.1630.228
phylumVerrucomicrobia-0.0320.1680.231
classVerrucomicrobiae-0.0320.1680.231
orderVerrucomicrobiales-0.0320.1680.231
familyVerrucomicrobiaceae-0.0320.1680.231
genusAkkermansia-0.0320.1680.231
speciesAkkermansia_muciniphila-0.0320.1680.231
speciesC2likevirus_unclassified-0.0310.1750.239
speciesLactococcus_phage_jm20.0310.1840.251
speciesParabacteroides_unclassified0.030.1880.256
genusC2likevirus-0.030.20.271
genusPseudoflavonifractor-0.0290.2110.285
speciesPseudoflavonifractor_capillosus-0.0290.2110.285
speciesOdoribacter_unclassified0.0290.2160.29
familyMyoviridae0.0280.2190.294
speciesBacteroides_barnesiae-0.0280.220.294
speciesRoseburia_intestinalis-0.0280.2250.3
speciesEnterococcus_faecium0.0270.2360.314
speciesAlistipes_indistinctus-0.0270.2370.314
speciesRuminococcus_sp_JC3040.0270.2380.315
speciesClostridium_perfringens-0.0270.2390.315
genusMyoviridae_noname0.0270.2410.317
speciesBacteroides_faecis-0.0270.2470.324
genusCitrobacter0.0270.2490.325
speciesProteus_mirabilis0.0270.2490.325
speciesEubacterium_ventriosum0.0260.2550.332
speciesAggregatibacter_segnis-0.0260.2580.335
orderViruses_noname0.0260.2590.335
speciesBacteroides_uniformis0.0250.2740.353
speciesBacteroides_intestinalis-0.0250.2830.364
speciesBacteroides_massiliensis0.0240.2930.375
speciesCollinsella_aerofaciens-0.0240.2930.375
speciesLactococcus_phage_936_sensu_lato-0.0240.30.383
speciesRuminococcus_lactaris-0.0240.3050.388
speciesLactobacillus_vaginalis0.0230.3190.405
speciesDorea_unclassified-0.0230.3210.406
speciesPrevotella_buccae-0.0220.3420.43
speciesAcidaminococcus_fermentans0.0220.3420.43
genusVeillonella-0.0220.3440.43
speciesWeissella_cibaria0.0220.3440.43
genusCollinsella0.0220.3450.43
speciesEggerthella_sp_1_3_56FAA0.0220.3450.43
speciesBacteroides_finegoldii0.0220.3520.437
genusSiphoviridae_noname0.0210.3530.437
speciesLactobacillus_crispatus0.0210.3560.44
speciesMegasphaera_micronuciformis0.0210.3580.441
speciesLactobacillus_amylovorus0.0210.3630.446
speciesBifidobacterium_bifidum0.0210.3660.449
speciesLactococcus_phage_phi7-0.0210.3730.456
phylumBacteroidetes-0.020.380.461
classBacteroidia-0.020.3810.461
orderBacteroidales-0.020.3810.461
genusLambdalikevirus0.020.3810.461
speciesBacteroides_dorei0.020.3840.464
genusPantoea0.020.3880.466
speciesPantoea_unclassified0.020.3880.466
classEpsilonproteobacteria-0.020.3930.47
orderCampylobacterales-0.020.3930.47
familyLactobacillaceae0.0180.4280.51
speciesEnterobacteria_phage_HK5440.0180.440.523
speciesBifidobacterium_breve0.0180.4470.53
speciesBacteroides_vulgatus-0.0170.4690.555
speciesMegamonas_funiformis-0.0160.4890.577
speciesAcidaminococcus_unclassified0.0160.490.577
speciesWeissella_confusa0.0160.4940.58
genusTunalikevirus-0.0160.5030.588
speciesBifidobacterium_dentium0.0150.5030.588
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0150.5120.597
speciesHaemophilus_paraphrohaemolyticus-0.0140.5410.629
phylumFirmicutes0.0140.5420.629
genusLactobacillus0.0140.5450.629
speciesLactobacillus_rhamnosus0.0140.5460.629
speciesVeillonella_parvula-0.0140.5470.629
familySiphoviridae-0.0140.5480.629
speciesBacteroides_sp_1_1_60.0140.550.629
speciesCitrobacter_unclassified0.0140.550.629
speciesBacteroides_plebeius-0.0140.5520.629
speciesLactobacillus_reuteri0.0140.5580.635
speciesBacteroides_caccae-0.0130.5610.637
speciesBacteroides_sp_2_1_220.0130.5840.661
genusPyramidobacter0.0120.5940.669
speciesPyramidobacter_piscolens0.0120.5940.669
familyRuminococcaceae-0.0120.5990.673
speciesLactobacillus_salivarius0.0120.6050.678
genusCampylobacter-0.0120.6140.687
speciesParabacteroides_goldsteinii0.0110.6260.699
speciesLactobacillus_fermentum-0.0110.630.701
speciesBacteroides_sp_4_3_47FAA-0.0110.6310.701
speciesDesulfovibrio_desulfuricans-0.0110.6350.704
familyCampylobacteraceae-0.0110.6410.709
speciesBacteroides_nordii0.0110.6440.71
speciesMegasphaera_unclassified-0.010.6510.716
orderPseudomonadales-0.010.6540.718
familyPorphyromonadaceae-0.010.6570.719
genusAcidaminococcaceae_unclassified-0.010.6690.731
speciesOscillibacter_sp_KLE_1728-0.010.6730.734
genusRothia0.0090.6920.749
genusParasutterella-0.0090.6920.749
speciesParasutterella_excrementihominis-0.0090.6920.749
speciesBacteroides_fluxus-0.0090.6990.755
familyMicrococcaceae0.0090.7080.763
genusMegasphaera-0.0090.7110.764
speciesKlebsiella_phage_KP36-0.0080.7350.788
familyVeillonellaceae0.0070.7540.807
speciesKlebsiella_oxytoca-0.0060.7830.836
phylumViruses_noname0.0060.7930.843
classViruses_noname0.0060.7930.843
speciesRothia_mucilaginosa0.0050.8130.862
orderCaudovirales-0.0050.8270.875
familyEubacteriaceae-0.0050.8320.879
genusEubacterium-0.0050.8370.881
speciesEubacterium_cylindroides-0.0050.8380.881
speciesMegamonas_hypermegale0.0050.840.881
speciesEnterobacter_cloacae-0.0040.850.89
speciesHaemophilus_sputorum-0.0040.860.898
speciesKlebsiella_sp_MS_92_30.0040.8740.911
speciesAlistipes_onderdonkii-0.0030.8880.923
speciesParabacteroides_sp_20_3-0.0030.8920.924
phylumSynergistetes0.0030.8990.924
classSynergistia0.0030.8990.924
orderSynergistales0.0030.8990.924
familySynergistaceae0.0030.8990.924
speciesFusobacterium_nucleatum-0.0030.9110.935
genusRoseburia-0.0020.9260.948
familyPodoviridae-0.0020.9340.954
speciesLactobacillus_gasseri0.0020.9360.954
genusProteus0.0020.9410.957
familyViruses_noname-0.0020.9450.957
genusViruses_noname-0.0020.9450.957
speciesBacteroides_eggerthii0.0010.9540.964
speciesEnterobacter_aerogenes0.0010.9570.965
speciesBacteroides_clarus0.0010.9680.974
genusEnterobacter-0.0010.970.974
speciesLactobacillus_oris-0.0010.9780.98
speciesLactococcus_phage_P680-0.0010.9820.982
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.02484583146680.003290639787840.00249399961634550818.3142
Type II diabetesChina1831850.004109156406990.003852612732630.0047504496614528259.33607
Rheumatoid arthritisChina127980.003844563695320.002917444539340.0614429549832370612.3587
ObesityDenmark1691230.001431942820210.001080659290620.156666649982952131.3078
Ulcerative colitisSpain78660.003837463332420.003290639787840.3833066436741627853.698
Type II diabetesSweden53920.003274981347720.004049001689350.3911095960161272443.0884
Type II diabetesDenmark752770.001457756927440.001292604353130.4360015127191901662.3332
Liver cirrhosisChina1201140.002979602801960.002947253035540.4757188661672397980.5502
Colorectal cancerAustria64350.004480629373420.004406082143520.8062937886972516885.1536
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382