MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2020-12-30 03:30:20 PST
Job id & description: 2331, EtfB2_60
Query type: protein
Count queries & homologs: 1, 43
Min % identity & max e-value: 60%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
EDU365923458029CompleteK03521COG2086FirmicutesPeptostreptococcus98.14100.074.62
EDU365923458028CompleteK03521COG2086FirmicutesPeptostreptococcus98.14100.070.83
EDU365923458316CompleteK03521COG2086unknownunknown98.14100.070.08
EDU365923461653CompleteK03521COG2086Firmicutesunknown98.14100.068.56
EDU365923367547CompleteK03521COG2086unknownunknown100.0100.064.31
EDU365923453439CompleteK03521COG2086unknownunknown98.14100.065.53
EDU365923317252Lack 5'-endK03521COG2086unknownunknown99.2698.1462.92
EDU365923382854CompleteK03521COG2086unknownunknown98.14100.067.42
EDU365923452129CompleteK03521COG2086unknownunknown98.14100.065.53
EDU365923377848CompleteK03521COG2086unknownunknown98.14100.067.04
EDU365923258437Lack 5'-endK03521COG2086unknownunknown98.8896.3464.66
EDU365923368800CompleteK03521COG2086unknownunknown98.1499.2565.17
EDU365923327585Lack 5'-endK03521COG2086unknownunknown98.1497.7762.55
EDU365923441042CompleteK03521COG2086unknownunknown98.14100.063.77
EDU365923388525CompleteK03521COG2086unknownunknown98.1499.2562.92
EDU365923436147CompleteK03521COG2086unknownunknown98.14100.063.4
EDU365923439524CompleteK03521COG2086unknownunknown98.14100.061.89
EDU365923406064CompleteK03521COG2086unknownunknown98.1499.2462.55
EDU365923435070CompleteK03521COG2086unknownunknown98.14100.063.77
EDU365923334511CompleteK03521COG2086unknownunknown98.1499.2562.36
EDU365923331540CompleteK03521COG2086unknownunknown98.1499.2561.99
EDU365923432587CompleteK03521COG2086unknownunknown98.14100.060.0
EDU365923303551CompleteK03521COG2086unknownunknown98.1499.2661.25
EDU365923486618CompleteK03521COG2086Firmicutesunknown98.14100.062.5
EDU365923339019CompleteK03521COG2086unknownunknown98.1499.2561.25
EDU365923486632CompleteK03521COG2086FirmicutesClostridium98.14100.061.74
EDU365923332932CompleteK03521COG2086unknownunknown98.1499.2561.62
EDU365923336308CompleteK03521COG2086unknownunknown98.1499.2560.52
EDU365924027630Lack both endsK03521COG2086unknownunknown86.9999.5764.96
EDU365923342103CompleteK03521COG2086unknownunknown98.1499.2560.89
EDU365923239938CompleteK03521COG2086unknownunknown98.1497.0860.15
EDU365923328758CompleteK03521COG2086unknownunknown98.1499.2560.52
EDU365923495746CompleteK03521COG2086FirmicutesClostridium98.14100.060.23
EDU365923492870CompleteK03521COG2086FirmicutesClostridium98.14100.060.98
EDU365923499191CompleteK03521COG2086FirmicutesClostridium98.14100.061.28
EDU365923550879Lack 3'-endK03521COG2086unknownunknown94.0598.8360.62
EDU365923912336Lack 5'-endK03521COG2086unknownunknown89.22100.061.67
EDU365924751451Lack 3'-endK03521COG2086unknownunknown75.46100.066.5
EDU365925021183Lack 3'-endK03521COG2086unknownunknown70.2698.9567.02
EDU365924891963Lack 5'-endK03521COG2086unknownunknown71.3899.4862.18
EDU365925010375Lack both endsK03521COG2086unknownunknown72.12100.061.03
EDU365924419182Lack both endsK03521COG2086Firmicutesunknown72.4993.9361.19
EDU365924944517Lack 3'-endK03521COG2086unknownunknown71.7599.4860.1
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
genusSubdoligranulum0.3963.85e-711.82e-68
speciesSubdoligranulum_unclassified0.3875.45e-681.29e-65
genusAnaerotruncus0.3671.47e-602.31e-58
classClostridia0.3482.98e-542.81e-52
orderClostridiales0.3482.98e-542.81e-52
speciesAnaerotruncus_unclassified0.3316.68e-495.25e-47
familyRuminococcaceae0.3245.27e-473.55e-45
classMethanobacteria0.2956.69e-393.16e-37
orderMethanobacteriales0.2956.69e-393.16e-37
familyMethanobacteriaceae0.2956.69e-393.16e-37
genusMethanobrevibacter0.2941.46e-386.26e-37
speciesMethanobrevibacter_smithii0.2932.07e-388.14e-37
phylumFirmicutes0.2917.82e-382.84e-36
phylumEuryarchaeota0.2886.19e-372.09e-35
genusPseudoflavonifractor0.2879.38e-372.77e-35
speciesPseudoflavonifractor_capillosus0.2879.38e-372.77e-35
speciesEubacterium_siraeum0.2772.49e-346.91e-33
speciesEubacterium_hallii0.2757.94e-342.08e-32
phylumBacteroidetes-0.2725.51e-331.24e-31
classBacteroidia-0.2725.53e-331.24e-31
orderBacteroidales-0.2725.53e-331.24e-31
phylumVerrucomicrobia0.2628.54e-311.49e-29
classVerrucomicrobiae0.2628.54e-311.49e-29
orderVerrucomicrobiales0.2628.54e-311.49e-29
familyVerrucomicrobiaceae0.2628.54e-311.49e-29
genusAkkermansia0.2628.54e-311.49e-29
speciesAkkermansia_muciniphila0.2628.54e-311.49e-29
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.262.25e-303.79e-29
speciesLachnospiraceae_bacterium_7_1_58FAA0.2595.71e-309.29e-29
speciesCoprococcus_catus0.2531.14e-281.79e-27
genusDorea0.2513.38e-285.15e-27
familyOxalobacteraceae0.254.05e-285.97e-27
speciesRuminococcus_obeum0.255.1e-287.29e-27
genusOxalobacter0.2481.49e-272.01e-26
speciesOxalobacter_formigenes0.2481.49e-272.01e-26
classErysipelotrichia0.2471.94e-272.41e-26
orderErysipelotrichales0.2471.94e-272.41e-26
familyErysipelotrichaceae0.2471.94e-272.41e-26
classDeltaproteobacteria0.2463.09e-273.56e-26
orderDesulfovibrionales0.2463.09e-273.56e-26
familyDesulfovibrionaceae0.2463.09e-273.56e-26
genusCoprococcus0.2463.91e-274.32e-26
genusDesulfovibrio0.2463.94e-274.32e-26
familyLachnospiraceae0.2441.03e-261.1e-25
genusLachnospiraceae_noname0.2381.51e-251.58e-24
speciesDorea_longicatena0.2372.63e-252.7e-24
genusHoldemania0.2364.94e-254.96e-24
speciesAlistipes_senegalensis0.2349e-258.85e-24
genusBarnesiella0.2315.32e-245.02e-23
speciesBarnesiella_intestinihominis0.2315.32e-245.02e-23
speciesRuminococcus_torques0.2264.45e-234.12e-22
speciesMethanobrevibacter_unclassified0.2258.02e-237.28e-22
speciesLachnospiraceae_bacterium_3_1_46FAA0.2249.96e-238.87e-22
orderCoriobacteriales0.2222.51e-222.15e-21
familyCoriobacteriaceae0.2222.51e-222.15e-21
genusButyrivibrio0.2214.64e-223.91e-21
genusRuminococcus0.2163.37e-212.79e-20
genusRuminococcaceae_noname0.2155.24e-214.19e-20
speciesRuminococcaceae_bacterium_D160.2155.24e-214.19e-20
speciesClostridium_leptum0.2062.74e-192.16e-18
familyClostridiales_noname0.2053.91e-193.03e-18
speciesAnaerostipes_hadrus0.2021.14e-188.68e-18
speciesDorea_formicigenerans0.22.68e-182.01e-17
genusAnaerostipes0.1985.39e-183.98e-17
speciesErysipelotrichaceae_bacterium_21_30.1985.86e-184.26e-17
speciesHoldemania_filiformis0.1977.8e-185.58e-17
speciesRoseburia_hominis0.1961.06e-177.47e-17
genusClostridiales_noname0.1961.11e-177.7e-17
speciesCoprococcus_comes0.1961.24e-178.48e-17
speciesBilophila_wadsworthia0.1942.24e-171.51e-16
genusAdlercreutzia0.1934.02e-172.64e-16
speciesAdlercreutzia_equolifaciens0.1934.02e-172.64e-16
familyBacteroidales_noname0.1925.46e-173.44e-16
genusBacteroidales_noname0.1925.46e-173.44e-16
speciesBacteroidales_bacterium_ph80.1925.46e-173.44e-16
speciesAlistipes_indistinctus0.1925.65e-173.51e-16
genusBilophila0.1917.69e-174.71e-16
genusBlautia0.1918.58e-175.19e-16
speciesBilophila_unclassified0.1864.49e-162.68e-15
speciesDesulfovibrio_desulfuricans0.1841.01e-155.96e-15
familyClostridiaceae0.1831.56e-159.09e-15
speciesMitsuokella_unclassified0.1812.96e-151.7e-14
genusClostridium0.1813.62e-152.06e-14
genusMitsuokella0.185.23e-152.94e-14
genusErysipelotrichaceae_noname0.1787.67e-154.26e-14
speciesClostridium_asparagiforme0.1752.43e-141.33e-13
speciesSubdoligranulum_sp_4_3_54A2FAA0.1743.14e-141.7e-13
speciesRuminococcus_bromii0.1744.07e-142.18e-13
familyEubacteriaceae0.1735.74e-143.03e-13
genusEubacterium0.1735.77e-143.03e-13
speciesAlistipes_shahii0.1726.22e-143.23e-13
familyOscillospiraceae0.1728.13e-144.13e-13
genusOscillibacter0.1728.13e-144.13e-13
genusGordonibacter0.1711.02e-135.07e-13
speciesGordonibacter_pamelaeae0.1711.02e-135.07e-13
speciesOscillibacter_unclassified0.1711.14e-135.6e-13
speciesClostridium_hathewayi0.1711.15e-135.6e-13
speciesEubacterium_ramulus0.171.23e-135.92e-13
genusCoprobacter0.1692.05e-139.68e-13
speciesCoprobacter_fastidiosus0.1692.05e-139.68e-13
phylumActinobacteria0.1673.13e-131.45e-12
classActinobacteria0.1673.13e-131.45e-12
familyPeptostreptococcaceae0.1621.89e-128.66e-12
speciesOlsenella_unclassified0.163.14e-121.43e-11
speciesRuminococcus_lactaris0.1594.08e-121.83e-11
speciesCollinsella_aerofaciens0.1586.22e-122.76e-11
speciesButyrivibrio_crossotus0.1586.25e-122.76e-11
speciesLachnospiraceae_bacterium_5_1_63FAA0.1579.51e-124.16e-11
genusOdoribacter0.1561.13e-114.89e-11
genusOlsenella0.1542.2e-119.44e-11
familyBacteroidaceae-0.1542.42e-111.02e-10
genusBacteroides-0.1542.42e-111.02e-10
genusCollinsella0.1514.63e-111.93e-10
speciesDesulfovibrio_piger0.1481.13e-104.68e-10
speciesAlistipes_onderdonkii0.1471.8e-107.39e-10
speciesClostridiales_bacterium_1_7_47FAA0.1452.71e-101.1e-09
speciesOdoribacter_splanchnicus0.1434.95e-102e-09
speciesCoprococcus_sp_ART55_10.1435.8e-102.32e-09
genusPeptostreptococcaceae_noname0.1426.31e-102.5e-09
speciesAnaerotruncus_colihominis0.1426.93e-102.73e-09
speciesLachnospiraceae_bacterium_1_1_57FAA0.1419.52e-103.71e-09
speciesEubacterium_ventriosum0.1381.96e-097.58e-09
speciesEubacterium_eligens0.1372.54e-099.75e-09
speciesRuminococcus_champanellensis0.1372.81e-091.07e-08
speciesCoprococcus_eutactus0.1354.62e-091.74e-08
speciesMegasphaera_micronuciformis-0.1311.27e-084.76e-08
familyRikenellaceae0.1282.6e-089.59e-08
genusAlistipes0.1282.6e-089.59e-08
speciesClostridium_bartlettii0.1283.11e-081.14e-07
speciesAlistipes_finegoldii0.1273.52e-081.28e-07
speciesBifidobacterium_adolescentis0.1273.68e-081.33e-07
speciesPeptostreptococcaceae_noname_unclassified0.1273.9e-081.39e-07
speciesAlistipes_sp_AP110.1221.33e-074.72e-07
speciesVeillonella_dispar-0.1211.59e-075.6e-07
speciesButyrivibrio_unclassified0.122.02e-077.01e-07
speciesHaemophilus_parainfluenzae-0.122.02e-077.01e-07
genusHaemophilus-0.1192.2e-077.58e-07
speciesErysipelotrichaceae_bacterium_6_1_450.1183.02e-071.03e-06
speciesBacteroides_ovatus-0.1183.05e-071.04e-06
speciesClostridium_sp_L2_500.1183.39e-071.14e-06
speciesHoldemania_unclassified0.1174.21e-071.41e-06
orderPasteurellales-0.1164.4e-071.45e-06
familyPasteurellaceae-0.1164.4e-071.45e-06
speciesLactobacillus_mucosae-0.1156.08e-071.99e-06
speciesEubacterium_biforme0.1131.03e-063.35e-06
orderBifidobacteriales0.111.86e-065.97e-06
familyBifidobacteriaceae0.111.86e-065.97e-06
genusBifidobacterium0.1092.35e-067.49e-06
speciesRuminococcus_gnavus-0.1092.45e-067.76e-06
speciesErysipelotrichaceae_bacterium_2_2_44A0.1073.39e-061.07e-05
speciesEubacterium_cylindroides0.1064.08e-061.28e-05
speciesPeptostreptococcus_anaerobius0.1055.05e-061.57e-05
familySiphoviridae0.1055.82e-061.8e-05
speciesBacteroides_pectinophilus0.1038.26e-062.53e-05
speciesCampylobacter_concisus-0.1038.72e-062.66e-05
genusMethanosphaera0.1038.85e-062.66e-05
speciesMethanosphaera_stadtmanae0.1038.85e-062.66e-05
speciesClostridium_citroniae0.1029.9e-062.96e-05
speciesFusobacterium_nucleatum-0.11.59e-054.72e-05
speciesPrevotella_buccae-0.0991.94e-055.72e-05
genusTuricibacter0.0982.01e-055.89e-05
phylumFusobacteria-0.0972.45e-057.05e-05
classFusobacteriia-0.0972.45e-057.05e-05
orderFusobacteriales-0.0972.45e-057.05e-05
speciesBifidobacterium_longum0.0972.59e-057.41e-05
speciesTuricibacter_unclassified0.0963.26e-059.27e-05
speciesBifidobacterium_breve-0.0963.41e-059.61e-05
genusPorphyromonas0.0963.42e-059.61e-05
phylumViruses_noname0.0953.55e-059.86e-05
classViruses_noname0.0953.55e-059.86e-05
genusFusobacterium-0.0944.73e-050.000131
speciesEubacterium_limosum0.0944.82e-050.000132
genusSiphoviridae_noname0.0926.23e-050.00017
familyFusobacteriaceae-0.0926.68e-050.000181
speciesRuminococcus_sp_5_1_39BFAA0.0917.58e-050.000204
familyPorphyromonadaceae0.0918.83e-050.000237
genusVeillonella-0.0918.89e-050.000237
speciesFusobacterium_mortiferum-0.099.04e-050.000239
speciesOscillibacter_sp_KLE_1728-0.099.06e-050.000239
familyAcidaminococcaceae0.099.26e-050.000243
speciesLactobacillus_salivarius-0.090.0001010.000263
speciesClostridium_bolteae0.0890.0001120.00029
genusActinobacillus-0.0890.0001140.000292
speciesActinobacillus_unclassified-0.0890.0001140.000292
speciesVeillonella_unclassified-0.0880.0001430.000365
familyClostridiales_Family_XI_Incertae_Sedis0.0870.0001760.000447
speciesLactococcus_phage_P6800.0870.0001790.000452
speciesStreptococcus_mitis_oralis_pneumoniae-0.0850.0002230.000556
speciesBacteroides_cellulosilyticus0.0850.0002230.000556
speciesKlebsiella_pneumoniae-0.0850.0002240.000556
speciesTuricibacter_sanguinis0.0850.0002290.000562
speciesVeillonella_parvula-0.0850.0002290.000562
speciesPorphyromonas_asaccharolytica0.0850.000230.000562
speciesVeillonella_atypica-0.0850.0002450.000596
genusMegasphaera-0.0840.000280.000678
genusKlebsiella-0.0840.0002830.000682
speciesBacteroides_stercoris-0.0840.0002990.000716
speciesClostridium_clostridioforme0.0830.0003120.000744
speciesStreptococcus_thermophilus0.0820.0003710.00088
speciesEggerthella_lenta0.0810.0004710.00111
speciesParabacteroides_goldsteinii0.080.0004960.00116
orderCaudovirales0.080.0005290.00124
speciesLactobacillus_crispatus-0.080.0005330.00124
speciesRoseburia_unclassified0.0790.0006510.00151
genusPeptoniphilus0.0780.0007430.00171
speciesAlistipes_putredinis0.0780.0007530.00173
orderViruses_noname0.0770.0008660.00197
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0760.001010.00229
speciesC2likevirus_unclassified0.0750.00110.00248
speciesCoprobacillus_sp_29_10.0750.001170.00263
genusC2likevirus0.0750.001240.00277
speciesGemella_morbillorum0.0740.001360.00303
speciesEscherichia_coli0.0740.00140.0031
speciesBacteroides_clarus0.0740.001450.0032
genusEscherichia0.0730.001510.00331
genusParvimonas0.0730.001520.00332
speciesParvimonas_unclassified0.0730.001530.00333
speciesOdoribacter_unclassified0.0730.001630.00353
genusPeptostreptococcus0.0720.001710.00369
speciesPorphyromonas_uenonis0.0710.002010.00431
familyLactobacillaceae-0.0710.002090.00446
speciesRuminococcus_callidus0.070.002420.00515
genusParaprevotella0.070.00250.00529
speciesParaprevotella_unclassified0.0690.002650.00558
genusPhascolarctobacterium0.0690.002940.00614
speciesPhascolarctobacterium_succinatutens0.0690.002940.00614
speciesClostridium_symbiosum0.0690.002960.00615
speciesCoprobacillus_sp_D60.0680.003460.00716
speciesEscherichia_unclassified0.0670.003510.00723
speciesParabacteroides_johnsonii0.0650.004970.0102
genusLactobacillus-0.0650.00510.0104
speciesBacteroides_xylanisolvens-0.0640.00540.011
familyVeillonellaceae-0.0640.005420.011
speciesParaprevotella_clara0.0640.005740.0116
genusCatenibacterium0.0640.005950.0119
speciesCatenibacterium_mitsuokai0.0640.005950.0119
speciesHaemophilus_sputorum-0.0630.006510.013
speciesBacteroides_vulgatus-0.0630.006790.0135
speciesEubacterium_rectale0.0620.007480.0148
genusFaecalibacterium0.0610.007840.0154
speciesFaecalibacterium_prausnitzii0.0610.007840.0154
speciesBacteroides_eggerthii0.0610.007880.0154
genusButyricimonas0.0610.008190.0158
speciesButyricimonas_synergistica0.0610.008190.0158
genusSolobacterium0.060.009230.0177
speciesSolobacterium_moorei0.060.009230.0177
genusRoseburia0.060.009250.0177
familyMyoviridae-0.060.009310.0177
speciesParaprevotella_xylaniphila0.060.009650.0183
speciesParabacteroides_sp_20_30.0590.01050.0198
speciesBacteroides_uniformis0.0590.0110.0207
speciesBlautia_hydrogenotrophica0.0580.01190.0223
genusCoriobacteriaceae_noname0.0580.01220.0228
speciesCoriobacteriaceae_bacterium_phI0.0580.01230.0229
speciesLactobacillus_gasseri-0.0570.01330.0246
speciesAggregatibacter_segnis-0.0570.01360.0251
speciesPrevotella_stercorea-0.0560.0150.0275
genusAggregatibacter-0.0560.01580.0289
speciesLactobacillus_oris-0.0560.01630.0296
speciesClostridium_nexile-0.0560.01630.0296
speciesHaemophilus_paraphrohaemolyticus-0.0550.0170.0307
speciesBacteroides_dorei0.0540.01870.0337
speciesBacteroides_thetaiotaomicron-0.0540.01880.0337
speciesPropionibacterium_freudenreichii0.0540.0190.034
orderEnterobacteriales0.0540.01960.0348
familyEnterobacteriaceae0.0540.01960.0348
phylumSynergistetes0.0530.02160.0378
classSynergistia0.0530.02160.0378
orderSynergistales0.0530.02160.0378
familySynergistaceae0.0530.02160.0378
genusFlavonifractor0.0530.02240.0389
speciesFlavonifractor_plautii0.0530.02240.0389
speciesLactobacillus_amylovorus-0.0530.02310.0398
speciesMegamonas_unclassified-0.0530.02310.0398
speciesLactobacillus_rhamnosus-0.0520.02380.0408
genusClostridiaceae_noname0.0520.02420.0412
speciesClostridiaceae_bacterium_JC1180.0520.02420.0412
genusMegamonas-0.0520.02450.0416
speciesEubacterium_sp_3_1_310.0510.02620.0443
familyActinomycetaceae0.0510.02840.0479
speciesBacteroides_intestinalis0.0510.02850.0479
speciesBacteroides_plebeius-0.0510.02860.0479
speciesBacteroides_caccae0.050.02940.049
speciesOdoribacter_laneus0.050.02980.0495
speciesMitsuokella_multacida0.050.0310.0513
genusActinomyces0.0490.03410.0563
speciesMegamonas_funiformis-0.0490.03480.0572
speciesHoldemania_sp_AP20.0490.03560.0583
speciesStreptococcus_anginosus-0.0480.03750.0612
speciesBacteroides_massiliensis0.0470.04040.0658
speciesLachnospiraceae_bacterium_5_1_57FAA0.0470.04240.0688
genusMyoviridae_noname-0.0450.05180.0837
speciesLactococcus_lactis0.0450.0520.0838
speciesParabacteroides_unclassified0.0450.05330.0856
speciesFusobacterium_ulcerans-0.0450.0540.0863
genusPrevotella-0.0450.05410.0863
genusAcidaminococcaceae_unclassified0.0440.05480.0871
genusParasutterella0.0440.05670.0895
speciesParasutterella_excrementihominis0.0440.05670.0895
speciesBacteroides_faecis0.0430.06010.0946
speciesCollinsella_intestinalis-0.0430.06230.0975
speciesLactobacillus_vaginalis-0.0430.06240.0975
speciesEnterobacter_aerogenes-0.0430.06270.0977
speciesPeptostreptococcus_stomatis0.0430.06360.0984
speciesDorea_unclassified-0.0430.06360.0984
speciesParabacteroides_sp_D130.0430.06470.0998
genusLactococcus0.0420.06760.104
speciesLactobacillus_fermentum-0.0420.07010.107
orderActinomycetales0.0420.0710.108
speciesLactococcus_phage_936_sensu_lato0.0410.07460.114
speciesFusobacterium_varium-0.0410.07660.116
genusBurkholderiales_noname0.0410.07750.117
speciesBurkholderiales_bacterium_1_1_470.0410.07750.117
speciesAlistipes_unclassified0.0410.07860.118
familyStreptococcaceae0.0410.07880.118
speciesDialister_succinatiphilus0.0410.07930.118
speciesBifidobacterium_animalis0.0410.07990.119
familyBurkholderiales_noname0.040.08280.123
speciesLactococcus_phage_jm20.040.08380.124
genusSutterellaceae_unclassified0.040.08420.124
speciesBifidobacterium_catenulatum0.040.08660.127
speciesMegamonas_rupellensis-0.0390.09010.132
speciesBacteroides_salyersiae0.0390.09290.136
speciesCollinsella_tanakaei-0.0380.0970.141
speciesClostridium_spiroforme0.0380.09720.141
genusStreptococcus0.0380.1020.148
speciesBifidobacterium_pseudocatenulatum-0.0380.1030.149
speciesParabacteroides_merdae0.0370.1060.153
speciesLactococcus_phage_phi70.0370.1070.154
genusPyramidobacter0.0370.110.156
speciesPyramidobacter_piscolens0.0370.110.156
speciesStreptococcus_vestibularis-0.0370.110.156
familyPropionibacteriaceae-0.0370.1140.162
speciesErysipelotrichaceae_bacterium_3_1_530.0360.1150.163
genusButyricicoccus0.0360.1180.166
speciesButyricicoccus_pullicaecorum0.0360.1180.166
speciesCoprobacillus_unclassified-0.0350.1280.179
speciesWeissella_confusa-0.0350.1290.18
speciesClostridium_sp_KLE_17550.0350.1310.182
genusCampylobacter-0.0350.1340.186
familyViruses_noname0.0340.1360.188
genusViruses_noname0.0340.1360.188
genusMorganella-0.0340.1380.189
speciesMorganella_morganii-0.0340.1380.189
speciesPrevotella_copri-0.0340.1420.194
speciesBlautia_producta0.0330.1510.206
speciesBacteroides_fragilis-0.0320.1630.222
speciesMegamonas_hypermegale-0.0320.1680.228
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0320.1690.229
speciesLeuconostoc_lactis-0.0320.1710.231
classEpsilonproteobacteria-0.0310.1760.236
orderCampylobacterales-0.0310.1760.236
speciesOscillibacter_sp_KLE_17450.0310.180.241
speciesStreptococcus_salivarius0.0310.1840.245
familyCampylobacteraceae-0.0290.2040.271
genusEggerthella0.0290.2060.273
speciesLachnospiraceae_bacterium_1_4_56FAA0.0290.2080.275
speciesSutterella_wadsworthensis0.0290.210.277
familyStaphylococcaceae0.0290.2120.278
speciesLactobacillus_acidophilus-0.0290.2130.278
speciesBifidobacterium_bifidum0.0290.2130.278
speciesStreptococcus_sanguinis-0.0280.2220.289
speciesEnterobacteria_phage_HK5440.0280.2240.291
genusSutterella0.0270.2360.306
speciesKlebsiella_sp_MS_92_3-0.0260.2560.331
speciesLactobacillus_ruminis0.0260.2650.342
speciesBacteroides_sp_2_1_22-0.0250.2730.351
genusLeuconostoc0.0250.290.372
familyMicrococcaceae-0.0240.2940.375
genusStaphylococcus0.0240.2940.375
speciesRothia_mucilaginosa-0.0240.2990.38
speciesStreptococcus_australis0.0240.3010.382
genusRothia-0.0240.3040.385
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0240.3090.39
speciesKlebsiella_phage_KP360.0230.3130.394
speciesMegasphaera_unclassified-0.0230.3210.403
classNegativicutes-0.0230.3230.403
orderSelenomonadales-0.0230.3230.403
genusTunalikevirus0.0230.3260.405
speciesClostridium_sp_ATCC_BAA_4420.0230.3260.405
speciesStreptococcus_infantarius-0.0220.3360.416
speciesEggerthella_sp_1_3_56FAA-0.0220.3430.424
speciesKlebsiella_oxytoca-0.0220.3520.434
speciesPrevotella_bivia0.0210.3610.444
genusProteus-0.0210.3630.445
speciesEnterococcus_faecium0.0210.3720.455
familyPrevotellaceae-0.0210.3750.457
speciesLachnospiraceae_bacterium_6_1_63FAA0.020.3810.463
speciesStreptococcus_mutans-0.020.3870.47
genusSuccinatimonas0.020.3890.47
speciesSuccinatimonas_hippei0.020.3890.47
classBacilli0.020.3920.472
speciesAcidaminococcus_unclassified-0.020.3940.473
familySuccinivibrionaceae0.0190.40.479
speciesBacteroides_salanitronis0.0190.4120.492
genusDialister0.0190.4210.502
speciesEggerthella_unclassified0.0180.4480.533
orderLactobacillales0.0170.460.544
familySutterellaceae-0.0170.460.544
familyLeuconostocaceae0.0170.4670.55
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0170.4670.55
speciesBacteroides_barnesiae0.0160.4770.56
classBetaproteobacteria-0.0160.4860.566
speciesLactobacillus_sanfranciscensis-0.0160.4860.566
speciesAlistipes_sp_HGB50.0160.4860.566
speciesBacteroides_finegoldii-0.0160.4940.574
speciesStreptococcus_pasteurianus-0.0150.5290.613
speciesBacteroides_oleiciplenus-0.0140.5510.637
orderBacillales0.0140.5590.645
genusWeissella-0.0130.5660.652
speciesCitrobacter_freundii0.0130.5760.661
speciesBacteroides_sp_3_1_190.0120.590.676
speciesProteus_mirabilis-0.0120.5940.678
speciesAcidaminococcus_fermentans0.0120.5950.678
orderPseudomonadales-0.0120.6070.689
orderBurkholderiales-0.0120.6080.689
speciesLactobacillus_plantarum0.0120.6090.689
speciesStreptococcus_parasanguinis-0.0120.6140.693
speciesRuminococcus_sp_JC3040.0110.6220.701
speciesAnaerostipes_unclassified-0.0110.6240.701
speciesLactococcus_garvieae-0.0110.6270.703
speciesBacteroides_coprocola-0.0110.6310.705
speciesStreptococcus_gordonii-0.0110.6320.705
genusCitrobacter0.0110.6360.708
speciesLactobacillus_delbrueckii-0.0110.6470.718
speciesCitrobacter_unclassified0.0110.6480.718
speciesEnterococcus_faecalis-0.010.6650.735
orderAeromonadales-0.010.6680.737
genusEnterobacter-0.010.6750.743
speciesBacteroides_sp_1_1_6-0.0090.6890.756
genusPropionibacterium-0.0090.690.756
genusAcidaminococcus0.0090.7020.767
speciesClostridium_ramosum-0.0090.7110.775
speciesBacteroides_coprophilus0.0080.7290.793
speciesParabacteroides_distasonis0.0080.7310.793
speciesBifidobacterium_dentium-0.0080.7350.796
familyPodoviridae0.0070.7530.813
familyBacillales_noname0.0070.7680.826
genusGemella0.0070.7680.826
speciesBacteroides_fluxus0.0070.7710.827
genusLambdalikevirus0.0060.7830.836
classGammaproteobacteria0.0060.7850.836
speciesSutterella_parvirubra-0.0060.7850.836
genusCoprobacillus0.0060.8080.857
speciesBacteroides_sp_4_3_47FAA0.0060.8080.857
speciesLactococcus_phage_bIL67-0.0050.820.868
genusPantoea-0.0050.8250.868
speciesPantoea_unclassified-0.0050.8250.868
speciesAcidaminococcus_intestini-0.0050.8260.868
speciesEnterobacter_cloacae-0.0050.8440.885
familyEnterococcaceae0.0040.8490.889
genusEnterococcus0.0040.8530.891
speciesLactobacillus_reuteri-0.0040.860.896
speciesRoseburia_inulinivorans-0.0040.8620.896
genusSlackia0.0040.8680.9
genusParabacteroides-0.0040.870.901
speciesDialister_invisus-0.0030.8810.91
speciesClostridium_perfringens-0.0030.8840.91
speciesRoseburia_intestinalis0.0030.8850.91
speciesEubacterium_dolichum0.0030.890.912
speciesStreptococcus_phage_Sfi21-0.0030.8910.912
phylumProteobacteria0.0030.8930.912
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0030.8980.915
speciesKlebsiella_unclassified0.0030.9060.922
speciesCollinsella_unclassified-0.0030.9130.927
speciesWeissella_cibaria-0.0020.9170.929
speciesBacteroides_nordii0.0020.9360.946
speciesLactobacillus_casei_paracasei0.0020.9380.946
speciesStreptococcus_lutetiensis0.0010.9650.971
speciesMegasphaera_elsdenii0.00.9860.989
speciesBifidobacterium_angulatum0.00.9870.989
speciesSlackia_piriformis0.00.9890.989
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
ObesityDenmark1691230.006743793936930.00900791870350.0018484227316111383.74207
Crohns diseaseSpain17660.005266338045650.01464224093630.00560274519147701223.315
Liver cirrhosisChina1201140.003823851141790.005563071095770.007854913726551036234.808
Ulcerative colitisSpain78660.009597573067550.01464224093630.155815010214922730.4381
Rheumatoid arthritisChina127980.008352299093950.007341634083550.158630719209744424.8241
Colorectal cancerAustria64350.009947130836320.008825393553950.3660338765111422348.1222
Type II diabetesSweden53920.008371675452130.01151202056550.388343289441267642.9258
Type II diabetesDenmark752770.007980220994290.00757999933560.6744489079132433779.7751
Type II diabetesChina1831850.007999462812480.006183624389330.7233112589652533983.7404
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382