MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 09:44:31 PST
Job id & description: 2370, ada1
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
245014.CK3_07490554449CompleteK01486COG1001Firmicutesunknown100.0100.0100.0
763982056-stool1_revised582879CompleteK01486COG1001Firmicutesunknown100.0100.0100.0
N042A_GL0060766582532CompleteK01486COG1001Firmicutesunknown100.0100.0100.0
484021.KP1_3777545102CompleteK01486COG1001ProteobacteriaKlebsiella100.0100.0100.0
1006551.KOX_25530580402CompleteK01486COG1001ProteobacteriaKlebsiella100.0100.0100.0
NLM027_GL0064704579970CompleteK01486COG1001ProteobacteriaEnterobacter100.0100.0100.0
MH0260_GL0160653578660CompleteK01486COG1001ProteobacteriaKlebsiella100.0100.0100.0
O2.UC7-0_GL0100045638921CompleteK01486COG1001Firmicutesunknown100.0100.0100.0
N086A_GL0080343580052CompleteK01486COG1001ProteobacteriaKlebsiella100.0100.0100.0
1045856.EcWSU1_03026610421CompleteK01486COG1001ProteobacteriaEnterobacter100.0100.0100.0
T2D-108A_GL0143670610082CompleteK01486COG1001ProteobacteriaEnterobacter100.0100.0100.0
716541.ECL_03425610448CompleteK01486COG1001ProteobacteriaEnterobacter100.0100.0100.0
MH0233_GL0072462668966CompleteK01486COG1001Firmicutesunknown100.0100.0100.0
T2D-148A_GL0037116756884CompleteK01489COG2131unknownunknown100.0100.0100.0
545696.HOLDEFILI_016241596281CompleteK01488COG1816FirmicutesHoldemania100.0100.0100.0
O2.UC55-0_GL01414691756572CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.CD25-0_GL00614941785288CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0199_GL00113501791042CompleteK01488COG1816unknownunknown100.0100.0100.0
469613.HMPREF0864_032791919254CompleteK01488COG1816Proteobacteriaunknown100.0100.0100.0
MH0247_GL00425021881235CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0147_GL00137141890367CompleteK01488COG1816ProteobacteriaSutterella100.0100.0100.0
O2.UC59-0_GL00154831904755CompleteK01488COG1816unknownunknown100.0100.0100.0
O2.UC22-1_GL01694091914571CompleteK01488COG1816FirmicutesEubacterium100.0100.0100.0
MH0191_GL01325871973954CompleteK01488COG1816Proteobacteriaunknown100.0100.0100.0
MH0227_GL00481731995287CompleteK01488COG1816unknownunknown100.0100.0100.0
O2.CD3-0-PT_GL01860921935160CompleteK01488COG1816FirmicutesClostridium100.0100.0100.0
O2.UC24-1_GL00539681998520CompleteK01488COG1816unknownunknown100.0100.0100.0
T2D-134A_GL00468192001872CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0189_GL01268342005606CompleteK01488COG1816unknownunknown100.0100.0100.0
O2.UC44-2_GL02144061977836CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.FI34_GL00119842000158CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.FI02_GL00938561999722CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.FI06_GL00181791978764CompleteK01488COG1816unknownunknown100.0100.0100.0
T2D-113A_GL00039942001800CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.UC15-3_GL00329901979208CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0407_GL02090132018446CompleteK01488COG1816unknownunknown100.0100.0100.0
NLM003_GL00294101990422CompleteK01488COG1816ProteobacteriaEscherichia100.0100.0100.0
V1.FI01_GL02029511978702CompleteK01488COG1816unknownunknown100.0100.0100.0
585054.EFER_14201961065CompleteK01488COG1816ProteobacteriaEscherichia100.0100.0100.0
MH0088_GL00285211993661CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.UC33-0_GL00990251989785CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0450_GL00746511987449Lack 5'-endK01488COG1816unknownunknown100.0100.0100.0
MH0006_GL01607092045776Lack 5'-endK01486COG1001Firmicutesunknown100.0100.0100.0
MH0035_GL00391802067828CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0045_GL00363102067917CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.UC14-1_GL00247312031834CompleteK01488COG1816unknownunknown100.0100.0100.0
DLM012_GL00022222108753CompleteK01488COG1816FirmicutesLactobacillus100.0100.0100.0
V1.CD12-3_GL00986912139745CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0301_GL00470482038377CompleteunknownunknownProteobacteriaDesulfovibrio100.0100.0100.0
O2.CD2-0-PT_GL00077362172912Lack 5'-endK01488COG1816FirmicutesBlautia100.0100.0100.0
T2D-143A_GL00005702165302Lack 5'-endK01488COG1816FirmicutesBlautia100.0100.0100.0
V1.UC50-1_GL00539282130317CompleteK01488COG1816FirmicutesLactococcus100.0100.0100.0
545696.HOLDEFILI_041802155392CompleteK01488COG1816FirmicutesHoldemania100.0100.0100.0
V1.CD54-0_GL01274762140232CompleteK01488COG1816unknownunknown100.0100.0100.0
210007.SMU_12952166701CompleteK01488COG1816FirmicutesStreptococcus100.0100.0100.0
O2.UC11-2_GL00999202173014Lack 5'-endK01488COG1816FirmicutesBlautia100.0100.0100.0
706433.HMPREF9430_006612237920CompleteK01488COG1816FirmicutesSolobacterium100.0100.0100.0
763961826-stool1_revised2166442CompleteK01488COG1816FirmicutesEubacterium100.0100.0100.0
457421.CBFG_019672237778CompleteK01488COG1816Firmicutesunknown100.0100.0100.0
944560.HMPREF9058_15892035018CompleteK01488COG1816ActinobacteriaActinomyces100.0100.0100.0
MH0044_GL00135882202280Lack 5'-endK01488COG1816FirmicutesRuminococcus100.0100.0100.0
O2.UC40-1_GL00470422184793Lack 5'-endK01488COG1816FirmicutesStreptococcus100.0100.0100.0
MH0189_GL00683362169339CompleteK01488COG1816SpirochaetesTreponema100.0100.0100.0
O2.CD1-0-PT_GL00403342172871CompleteK01488COG1816FirmicutesRuminococcus100.0100.0100.0
V1.UC47-4_GL01773382246564CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0239_GL00592532216777CompleteK01488COG1816unknownunknown100.0100.0100.0
T2D-11A_GL01409812211874CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0233_GL00537872216703CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0277_GL00395472229360CompleteK01488COG1816FirmicutesEnterococcus100.0100.0100.0
NOM009_GL00200832211306CompleteK01488COG1816FirmicutesEubacterium100.0100.0100.0
272622.LACR_03212225478CompleteK01488COG1816FirmicutesLactococcus100.0100.0100.0
V1.UC16-0_GL00198512234392CompleteK01488COG1816FirmicutesStreptococcus100.0100.0100.0
MH0416_GL01689562219213CompleteK01488COG1816unknownunknown100.0100.0100.0
O2.UC8-2_GL00120302244931CompleteK01488COG1816unknownunknown100.0100.0100.0
353496.LBU_08992274894CompleteK01488COG1816FirmicutesLactobacillus100.0100.0100.0
DOF010_GL00079402223021CompleteK01488COG1816FirmicutesStreptococcus100.0100.0100.0
MH0193_GL01342202252480CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0244_GL01178802253152CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0251_GL00288252265890CompleteK01488COG1816unknownunknown100.0100.0100.0
DOF012_GL00393042285389CompleteK01488COG1816FirmicutesLactobacillus100.0100.0100.0
MH0159_GL00578502203720CompleteK01488COG1816unknownunknown100.0100.0100.0
290338.CKO_016302213417CompleteK01488COG1816ProteobacteriaCitrobacter100.0100.0100.0
MH0287_GL00563752279322CompleteK01488COG1816FirmicutesStreptococcus100.0100.0100.0
V1.UC39-4_GL00109862246479CompleteK01488COG1816ProteobacteriaProvidencia100.0100.0100.0
888833.HMPREF9961_16422288380CompleteK01488COG1816FirmicutesStreptococcus100.0100.0100.0
MH0003_GL00428662275308CompleteK01488COG1816FirmicutesStreptococcus100.0100.0100.0
MH0012_GL00927222288705CompleteK01488COG1816FirmicutesMitsuokella100.0100.0100.0
MH0096_GL00962742239025CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0354_GL00366302292837CompleteK01488COG1816FirmicutesMitsuokella100.0100.0100.0
MH0212_GL00718872252792CompleteK01488COG1816unknownunknown100.0100.0100.0
321967.LSEI_22072288063CompleteK01488COG1816FirmicutesLactobacillus100.0100.0100.0
MH0402_GL02153542242998CompleteK01488COG1816unknownunknown100.0100.0100.0
T2D-17A_GL00746662273372CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.FI01_GL00973362151580CompleteK11991COG0590unknownunknown100.0100.0100.0
MH0396_GL00393542267834CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0139_GL00740352290159CompleteK01488COG1816unknownunknown100.0100.0100.0
1069533.Sinf_12932288023CompleteK01488COG1816FirmicutesStreptococcus100.0100.0100.0
O2.CD1-0-PT_GL01326812281948CompleteK01488COG1816FirmicutesStreptococcus100.0100.0100.0
MH0099_GL01225242289624CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0396_GL01680182280811CompleteK03652COG2094unknownunknown100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyEubacteriaceae0.4256.8e-831.62e-80
genusEubacterium0.4256.87e-831.62e-80
speciesEubacterium_rectale0.3641.28e-592.01e-57
phylumBacteroidetes-0.3383.24e-512.59e-49
classBacteroidia-0.3383.29e-512.59e-49
orderBacteroidales-0.3383.29e-512.59e-49
classGammaproteobacteria0.3176e-454.05e-43
orderEnterobacteriales0.3042.5e-411.31e-39
familyEnterobacteriaceae0.3042.5e-411.31e-39
speciesStreptococcus_salivarius0.3042.94e-411.39e-39
familyStreptococcaceae0.2932.83e-381.21e-36
genusStreptococcus0.291.13e-374.44e-36
classBacilli0.2892.66e-379.66e-36
orderLactobacillales0.2852.65e-368.93e-35
familyPorphyromonadaceae-0.2853.69e-361.16e-34
phylumProteobacteria0.2669.24e-322.73e-30
genusKlebsiella0.2651.86e-315.16e-30
speciesLachnospiraceae_bacterium_5_1_63FAA0.2561.93e-295.06e-28
phylumFirmicutes0.2562.35e-295.84e-28
genusEscherichia0.2553.41e-298.05e-28
classClostridia0.2447.96e-271.71e-25
orderClostridiales0.2447.96e-271.71e-25
speciesEscherichia_coli0.2431.77e-263.63e-25
speciesKlebsiella_pneumoniae0.2431.93e-263.8e-25
genusBlautia0.2414.62e-268.72e-25
genusPantoea0.2357.11e-251.24e-23
speciesPantoea_unclassified0.2357.11e-251.24e-23
familyRikenellaceae-0.2249.79e-231.59e-21
genusAlistipes-0.2249.79e-231.59e-21
speciesStreptococcus_parasanguinis0.2222.28e-223.59e-21
genusParabacteroides-0.227.09e-221.08e-20
genusRoseburia0.2155.51e-218.13e-20
speciesRuminococcus_gnavus0.2131.31e-201.87e-19
genusOdoribacter-0.2122.26e-203.14e-19
familyLachnospiraceae0.2112.64e-203.56e-19
genusVeillonella0.2096.11e-208.01e-19
speciesRoseburia_inulinivorans0.2096.95e-208.87e-19
speciesOdoribacter_splanchnicus-0.2089.9e-201.23e-18
speciesVeillonella_parvula0.2071.45e-191.75e-18
genusEggerthella0.2053.14e-193.71e-18
orderBacillales0.2053.81e-194.39e-18
speciesEggerthella_unclassified0.2021.2e-181.35e-17
speciesRuminococcus_sp_5_1_39BFAA0.22.96e-183.25e-17
speciesRuminococcus_torques0.1977.84e-188.41e-17
genusPeptostreptococcaceae_noname0.1925.77e-176.05e-16
familyBacillales_noname0.1919.51e-179.55e-16
genusGemella0.1919.51e-179.55e-16
speciesAlistipes_shahii-0.1882.2e-162.16e-15
speciesEscherichia_unclassified0.1873.89e-163.75e-15
speciesAlistipes_senegalensis-0.1864.77e-164.5e-15
familyPeptostreptococcaceae0.1864.9e-164.53e-15
genusLachnospiraceae_noname0.1856.28e-165.7e-15
speciesStreptococcus_vestibularis0.1841.14e-151.02e-14
speciesLachnospiraceae_bacterium_7_1_58FAA-0.1822.53e-152.21e-14
speciesAlistipes_indistinctus-0.1812.69e-152.31e-14
speciesStreptococcus_mitis_oralis_pneumoniae0.1813.54e-152.98e-14
speciesVeillonella_atypica0.185.03e-154.17e-14
speciesRuminococcus_obeum0.1795.81e-154.73e-14
speciesVeillonella_unclassified0.1789.37e-157.5e-14
genusSubdoligranulum-0.1781e-147.87e-14
genusRuminococcus0.1762e-141.55e-13
speciesStreptococcus_sanguinis0.1752.24e-141.71e-13
genusEnterobacter0.1752.41e-141.81e-13
speciesSubdoligranulum_unclassified-0.1752.72e-142.01e-13
speciesEnterobacter_cloacae0.1743.92e-142.85e-13
speciesAnaerotruncus_unclassified-0.1735.85e-144.18e-13
genusAnaerotruncus-0.1726.73e-144.74e-13
genusOxalobacter-0.1719e-146.16e-13
speciesOxalobacter_formigenes-0.1719e-146.16e-13
familyOxalobacteraceae-0.171.31e-138.83e-13
speciesDorea_formicigenerans0.171.48e-139.84e-13
speciesClostridium_perfringens0.1682.89e-131.89e-12
speciesStreptococcus_australis0.1664.76e-133.08e-12
speciesVeillonella_dispar0.1631.5e-129.57e-12
familyLeuconostocaceae0.163.5e-122.2e-11
speciesClostridium_bartlettii0.1594.42e-122.75e-11
speciesCoprobacillus_unclassified0.1586.49e-123.98e-11
speciesKlebsiella_oxytoca0.1587.41e-124.48e-11
speciesEubacterium_eligens0.1577.99e-124.77e-11
genusSolobacterium0.1551.65e-119.61e-11
speciesSolobacterium_moorei0.1551.65e-119.61e-11
speciesLachnospiraceae_bacterium_1_4_56FAA0.1515.67e-113.26e-10
speciesStreptococcus_gordonii0.156.43e-113.66e-10
speciesCitrobacter_unclassified0.156.67e-113.68e-10
genusFaecalibacterium0.156.71e-113.68e-10
speciesFaecalibacterium_prausnitzii0.156.71e-113.68e-10
speciesAnaerostipes_hadrus0.1498.42e-114.57e-10
genusCatenibacterium-0.1499.44e-115.01e-10
speciesCatenibacterium_mitsuokai-0.1499.44e-115.01e-10
genusWeissella0.1491.02e-105.35e-10
genusDesulfovibrio-0.1491.08e-105.6e-10
classMethanobacteria-0.1481.33e-106.68e-10
orderMethanobacteriales-0.1481.33e-106.68e-10
familyMethanobacteriaceae-0.1481.33e-106.68e-10
speciesRoseburia_intestinalis0.1471.68e-108.35e-10
speciesEubacterium_hallii0.1471.71e-108.41e-10
familyActinomycetaceae0.1471.84e-108.95e-10
familyLactobacillaceae0.1471.86e-108.96e-10
phylumEuryarchaeota-0.1462.23e-101.06e-09
genusLactobacillus0.1462.25e-101.06e-09
speciesCitrobacter_freundii0.1452.84e-101.33e-09
speciesEubacterium_siraeum-0.1452.93e-101.36e-09
familyBacteroidales_noname-0.1453.39e-101.52e-09
genusBacteroidales_noname-0.1453.39e-101.52e-09
speciesBacteroidales_bacterium_ph8-0.1453.39e-101.52e-09
genusActinomyces0.1443.62e-101.61e-09
genusMethanobrevibacter-0.1434.96e-102.19e-09
speciesMethanobrevibacter_smithii-0.1435.98e-102.61e-09
genusCitrobacter0.1426.05e-102.62e-09
phylumVerrucomicrobia-0.1426.73e-102.76e-09
classVerrucomicrobiae-0.1426.73e-102.76e-09
orderVerrucomicrobiales-0.1426.73e-102.76e-09
familyVerrucomicrobiaceae-0.1426.73e-102.76e-09
genusAkkermansia-0.1426.73e-102.76e-09
speciesAkkermansia_muciniphila-0.1426.73e-102.76e-09
speciesParabacteroides_merdae-0.1427.34e-102.99e-09
genusAnaerostipes0.1391.74e-097.02e-09
speciesStreptococcus_anginosus0.1381.91e-097.64e-09
genusDorea0.1382.15e-098.53e-09
speciesMegasphaera_micronuciformis0.1372.4e-099.44e-09
genusBarnesiella-0.1372.74e-091.06e-08
speciesBarnesiella_intestinihominis-0.1372.74e-091.06e-08
speciesButyrivibrio_crossotus-0.1363.39e-091.3e-08
phylumActinobacteria0.1328.95e-093.38e-08
classActinobacteria0.1328.95e-093.38e-08
speciesWeissella_cibaria0.1329.08e-093.4e-08
speciesAlistipes_putredinis-0.1321e-083.72e-08
genusPseudoflavonifractor-0.1311.17e-084.28e-08
speciesPseudoflavonifractor_capillosus-0.1311.17e-084.28e-08
speciesDorea_unclassified-0.131.53e-085.56e-08
speciesBifidobacterium_longum0.131.56e-085.62e-08
speciesWeissella_confusa0.131.73e-086.19e-08
speciesC2likevirus_unclassified-0.1291.96e-086.96e-08
familyPrevotellaceae-0.1292.01e-087.08e-08
speciesRoseburia_unclassified-0.1292.2e-087.69e-08
genusCoprobacillus0.1282.54e-088.75e-08
speciesMitsuokella_unclassified-0.1282.54e-088.75e-08
genusC2likevirus-0.1283.13e-081.07e-07
speciesBifidobacterium_pseudocatenulatum0.1265.02e-081.7e-07
orderActinomycetales0.1247.43e-082.5e-07
familyOscillospiraceae-0.1238.53e-082.84e-07
genusOscillibacter-0.1238.53e-082.84e-07
speciesDesulfovibrio_piger-0.1238.96e-082.96e-07
orderBifidobacteriales0.1239.6e-083.12e-07
familyBifidobacteriaceae0.1239.6e-083.12e-07
speciesOscillibacter_unclassified-0.1221.2e-073.88e-07
familyEnterococcaceae0.1221.21e-073.89e-07
genusEnterococcus0.1221.25e-073.99e-07
genusMitsuokella-0.1211.4e-074.43e-07
speciesAlistipes_finegoldii-0.1211.55e-074.88e-07
genusBifidobacterium0.1211.62e-075.06e-07
genusButyrivibrio-0.1192.43e-077.55e-07
speciesParaprevotella_xylaniphila-0.1182.86e-078.82e-07
speciesKlebsiella_sp_MS_92_30.1182.88e-078.83e-07
speciesBifidobacterium_dentium0.1183.08e-079.38e-07
speciesHaemophilus_parainfluenzae0.1174.1e-071.24e-06
genusFusobacterium0.1164.59e-071.38e-06
speciesClostridium_bolteae0.1165.05e-071.51e-06
familyFusobacteriaceae0.1165.13e-071.52e-06
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1155.61e-071.65e-06
genusAggregatibacter0.1155.75e-071.69e-06
speciesLachnospiraceae_bacterium_1_1_57FAA0.1155.84e-071.7e-06
genusHaemophilus0.1155.93e-071.72e-06
speciesLactococcus_garvieae0.1147.17e-072.06e-06
speciesEggerthella_lenta0.1147.4e-072.12e-06
orderPasteurellales0.1139.73e-072.75e-06
familyPasteurellaceae0.1139.73e-072.75e-06
phylumFusobacteria0.1121.23e-063.42e-06
classFusobacteriia0.1121.23e-063.42e-06
orderFusobacteriales0.1121.23e-063.42e-06
speciesRothia_mucilaginosa0.1121.27e-063.51e-06
speciesClostridium_ramosum0.1111.51e-064.14e-06
speciesRuminococcus_champanellensis-0.1111.67e-064.56e-06
speciesAlistipes_onderdonkii-0.1092.31e-066.27e-06
speciesHaemophilus_sputorum0.1092.38e-066.42e-06
speciesClostridium_citroniae0.1092.49e-066.68e-06
familyBacteroidaceae-0.1082.63e-066.97e-06
genusBacteroides-0.1082.63e-066.97e-06
speciesLachnospiraceae_bacterium_2_1_58FAA0.1082.95e-067.78e-06
speciesDesulfovibrio_desulfuricans-0.1083.08e-068.08e-06
speciesMethanobrevibacter_unclassified-0.1073.47e-069.05e-06
speciesClostridium_nexile0.1073.79e-069.83e-06
speciesStreptococcus_lutetiensis0.1073.81e-069.83e-06
speciesParaprevotella_clara-0.1073.87e-069.93e-06
speciesRuminococcus_bromii0.1064.64e-061.18e-05
speciesBacteroides_uniformis-0.1054.95e-061.26e-05
genusRuminococcaceae_noname-0.1055.27e-061.32e-05
speciesRuminococcaceae_bacterium_D16-0.1055.27e-061.32e-05
speciesOlsenella_unclassified-0.1045.99e-061.5e-05
genusLeuconostoc0.1046.08e-061.51e-05
speciesStreptococcus_mutans0.1047.24e-061.79e-05
genusCoprobacter-0.1038.28e-062.02e-05
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genusSutterellaceae_unclassified-0.1011.33e-053.15e-05
genusAdlercreutzia0.11.56e-053.66e-05
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speciesSutterella_wadsworthensis-0.0991.71e-053.92e-05
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genusParaprevotella-0.0982.02e-054.58e-05
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genusOlsenella-0.0935.38e-050.000116
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speciesClostridium_leptum-0.0926.52e-050.00014
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speciesEubacterium_ventriosum0.0926.77e-050.000144
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speciesEnterococcus_faecium0.0870.0001530.000309
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speciesCoprococcus_catus0.0860.0001890.000376
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speciesAlistipes_sp_AP11-0.0830.0003430.000675
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familyCoriobacteriaceae0.0820.000360.000702
speciesCoprococcus_comes0.0820.000380.000738
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speciesBacteroides_fragilis0.0810.0004370.000842
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speciesOscillibacter_sp_KLE_1745-0.0760.0009490.00181
speciesLactobacillus_fermentum0.0750.001190.00226
speciesGemella_morbillorum0.0750.001210.00228
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speciesEubacterium_biforme-0.0740.001380.00256
speciesClostridium_hathewayi0.0730.001510.00279
speciesClostridium_sp_L2_50-0.0730.001520.0028
speciesParabacteroides_sp_D13-0.0720.001770.00325
genusTuricibacter0.0720.001810.00331
speciesBacteroides_oleiciplenus0.0720.001910.00348
speciesParabacteroides_goldsteinii-0.0710.002120.00385
speciesLactobacillus_vaginalis0.0710.002220.00401
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0710.002230.00402
speciesTuricibacter_sanguinis0.070.002340.0042
genusPeptostreptococcus0.070.002490.00444
genusAcidaminococcaceae_unclassified-0.070.002490.00444
speciesLactobacillus_plantarum0.0690.002710.00481
genusProteus0.0690.002910.00514
speciesMitsuokella_multacida-0.0690.003010.0053
genusButyricimonas-0.0680.003230.00565
speciesButyricimonas_synergistica-0.0680.003230.00565
speciesFusobacterium_mortiferum0.0680.003270.0057
genusMyoviridae_noname0.0680.003380.00587
genusCoprococcus0.0670.003570.00617
speciesStreptococcus_thermophilus0.0670.003680.00634
speciesMegamonas_hypermegale0.0650.005040.00865
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0650.005090.0087
speciesMegamonas_rupellensis0.0650.005110.00871
speciesTuricibacter_unclassified0.0650.005160.00876
speciesLactobacillus_ruminis-0.0630.00610.0103
speciesEggerthella_sp_1_3_56FAA0.0630.006260.0106
genusHoldemania0.0630.006720.0113
speciesAcidaminococcus_unclassified-0.0630.006740.0113
genusCampylobacter0.0620.006890.0115
genusFlavonifractor0.0620.007360.0122
speciesFlavonifractor_plautii0.0620.007360.0122
speciesHaemophilus_paraphrohaemolyticus0.0620.00760.0125
speciesErysipelotrichaceae_bacterium_21_3-0.0620.007730.0127
speciesPeptostreptococcus_stomatis0.060.009930.0163
familyCampylobacteraceae0.0590.01040.017
familySiphoviridae-0.0580.01250.0203
orderViruses_noname0.0560.01470.0238
genusMorganella0.0560.01510.0243
speciesMorganella_morganii0.0560.01510.0243
speciesLactobacillus_delbrueckii0.0560.01570.0252
speciesBacteroides_ovatus-0.0550.0180.0288
genusMegasphaera0.0550.01810.0289
genusLactococcus0.0540.01860.0296
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0540.01930.0306
familyRuminococcaceae0.0540.01960.0309
classDeltaproteobacteria-0.0540.01990.0311
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familyDesulfovibrionaceae-0.0540.01990.0311
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speciesParabacteroides_unclassified-0.0530.02260.0351
speciesBifidobacterium_breve0.0530.02310.0357
speciesBacteroides_salanitronis-0.0520.02390.0369
speciesFusobacterium_ulcerans0.0520.02460.0378
speciesOscillibacter_sp_KLE_1728-0.0520.02490.0382
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speciesMegamonas_funiformis0.0510.02890.044
speciesBacteroides_faecis-0.050.02930.0445
speciesAlistipes_unclassified-0.050.030.0454
classEpsilonproteobacteria0.050.03070.0461
orderCampylobacterales0.050.03070.0461
speciesBacteroides_barnesiae-0.0490.03240.0485
speciesCoprobacillus_sp_29_1-0.0490.03250.0485
genusMethanosphaera-0.0480.0370.0549
speciesMethanosphaera_stadtmanae-0.0480.0370.0549
genusTunalikevirus0.0480.03790.0561
genusPyramidobacter0.0480.03840.0565
speciesPyramidobacter_piscolens0.0480.03840.0565
genusAcidaminococcus-0.0480.03930.0576
speciesBacteroides_coprocola0.0480.03960.0579
speciesBifidobacterium_bifidum0.0470.04110.0599
genusErysipelotrichaceae_noname-0.0460.04890.071
genusClostridium0.0450.05070.0734
speciesProteus_mirabilis0.0450.05220.0753
speciesBacteroides_coprophilus-0.0440.060.0863
speciesLactobacillus_amylovorus0.0430.06110.0877
speciesCoprococcus_sp_ART55_1-0.0430.06130.0877
speciesClostridiales_bacterium_1_7_47FAA0.0420.06970.0994
familyClostridiales_Family_XI_Incertae_Sedis0.0420.07270.103
speciesBifidobacterium_angulatum-0.0410.07310.104
speciesRuminococcus_lactaris0.0410.07510.106
genusLambdalikevirus0.0410.0780.11
speciesLactobacillus_crispatus0.040.08130.114
familyClostridiaceae0.040.08280.116
familyClostridiales_noname-0.040.08330.116
speciesEnterobacteria_phage_HK5440.040.08370.117
speciesBacteroides_dorei-0.040.08590.119
speciesKlebsiella_phage_KP360.0390.08850.122
speciesLactobacillus_oris0.0390.09270.128
speciesPrevotella_buccae0.0380.10.138
speciesHoldemania_filiformis0.0370.1060.145
genusBurkholderiales_noname0.0370.1080.147
speciesBurkholderiales_bacterium_1_1_470.0370.1080.147
phylumSynergistetes0.0370.1090.147
classSynergistia0.0370.1090.147
orderSynergistales0.0370.1090.147
familySynergistaceae0.0370.1090.147
speciesBacteroides_eggerthii-0.0370.110.148
speciesBlautia_hydrogenotrophica0.0360.1160.156
speciesRuminococcus_sp_JC3040.0360.1180.158
speciesBacteroides_sp_1_1_6-0.0360.120.16
speciesBacteroides_plebeius0.0360.120.16
familyBurkholderiales_noname0.0360.1230.163
speciesLactobacillus_acidophilus0.0350.1310.173
speciesCollinsella_unclassified-0.0340.140.185
speciesLachnospiraceae_bacterium_5_1_57FAA0.0330.1540.202
speciesClostridium_asparagiforme0.0330.1540.202
familySuccinivibrionaceae-0.0330.1550.203
speciesBacteroides_thetaiotaomicron-0.0330.1560.203
speciesEubacterium_sp_3_1_31-0.0330.1570.204
speciesEubacterium_limosum-0.0330.1590.206
speciesBifidobacterium_catenulatum0.0320.1610.208
speciesClostridium_clostridioforme0.0320.1660.214
speciesBlautia_producta0.0320.1690.217
familyPropionibacteriaceae-0.0320.1730.222
speciesLachnospiraceae_bacterium_2_1_46FAA0.0310.1760.224
speciesFusobacterium_varium0.0310.1760.224
speciesParabacteroides_johnsonii-0.0310.1760.224
speciesRuminococcus_callidus0.0310.1840.233
speciesCoprococcus_eutactus-0.0310.1870.237
familyPodoviridae0.0290.2030.256
speciesEubacterium_dolichum0.0290.2040.257
genusParasutterella0.0290.2060.258
speciesParasutterella_excrementihominis0.0290.2060.258
genusSuccinatimonas-0.0290.2120.264
speciesSuccinatimonas_hippei-0.0290.2120.264
speciesLactococcus_lactis0.0270.2380.296
speciesBacteroides_vulgatus-0.0270.2450.304
genusDialister0.0260.2610.322
speciesDialister_invisus0.0260.2640.325
speciesAcidaminococcus_fermentans-0.0250.2810.345
speciesCollinsella_intestinalis0.0250.2880.353
speciesSlackia_piriformis-0.0240.2950.361
speciesCoriobacteriaceae_bacterium_phI-0.0240.3010.366
speciesBacteroides_clarus-0.0240.3010.366
genusParvimonas0.0240.3020.366
speciesParvimonas_unclassified0.0240.3030.367
speciesOdoribacter_laneus-0.0240.3050.368
classNegativicutes0.0230.3260.392
orderSelenomonadales0.0230.3260.392
speciesLactobacillus_reuteri0.0220.3310.397
genusClostridiales_noname-0.0220.3360.401
speciesLactobacillus_casei_paracasei0.0220.3490.416
genusCoriobacteriaceae_noname-0.0210.3560.423
speciesLactococcus_phage_936_sensu_lato-0.0210.3650.433
familyViruses_noname0.0210.3680.434
genusViruses_noname0.0210.3680.434
genusSiphoviridae_noname0.020.3850.453
genusSlackia-0.0190.40.47
speciesBacteroides_sp_3_1_190.0190.4080.478
speciesClostridium_sp_ATCC_BAA_442-0.0180.4470.522
speciesEubacterium_cylindroides-0.0180.4480.522
speciesBacteroides_sp_2_1_220.0170.4520.524
classErysipelotrichia-0.0170.4540.524
orderErysipelotrichales-0.0170.4540.524
familyErysipelotrichaceae-0.0170.4540.524
speciesMegasphaera_unclassified-0.0170.4660.536
speciesClostridium_sp_KLE_1755-0.0170.4680.537
speciesDialister_succinatiphilus0.0170.4690.537
phylumViruses_noname0.0170.4740.54
classViruses_noname0.0170.4740.54
speciesPorphyromonas_asaccharolytica-0.0170.4750.54
speciesCoprobacillus_sp_D6-0.0160.4770.541
speciesBacteroides_massiliensis0.0160.4790.542
speciesBifidobacterium_adolescentis-0.0160.4830.545
speciesRoseburia_hominis-0.0160.4880.55
speciesPropionibacterium_freudenreichii0.0150.5030.565
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0150.5050.565
speciesSutterella_parvirubra0.0150.5060.565
speciesMegasphaera_elsdenii0.0150.5060.565
speciesBifidobacterium_animalis0.0150.5270.587
orderAeromonadales0.0140.5350.594
speciesClostridium_spiroforme-0.0140.5380.596
speciesAnaerostipes_unclassified-0.0140.5410.598
speciesBacteroides_stercoris-0.0140.5540.611
speciesAcidaminococcus_intestini0.0140.5550.611
speciesBacteroides_sp_4_3_47FAA-0.0130.5610.615
speciesParabacteroides_distasonis-0.0130.5620.615
speciesPorphyromonas_uenonis-0.0130.5840.638
speciesPeptostreptococcus_anaerobius-0.0120.590.643
speciesBilophila_unclassified-0.0120.6040.655
genusButyricicoccus-0.0120.6050.655
speciesButyricicoccus_pullicaecorum-0.0120.6050.655
speciesPrevotella_bivia0.0120.6180.667
speciesBacteroides_intestinalis0.0110.640.69
speciesBacteroides_fluxus0.0110.6430.691
genusBilophila-0.0110.6490.696
genusPorphyromonas-0.0110.650.696
speciesBacteroides_finegoldii-0.010.6540.698
orderCaudovirales-0.010.6690.713
speciesAnaerotruncus_colihominis0.010.6710.713
speciesStreptococcus_phage_Sfi210.010.6790.72
speciesBacteroides_nordii0.0090.690.73
speciesLachnospiraceae_bacterium_8_1_57FAA0.0090.7020.741
speciesBilophila_wadsworthia0.0090.7030.741
speciesStreptococcus_pasteurianus0.0080.7170.754
speciesHoldemania_sp_AP20.0080.7250.76
speciesParabacteroides_sp_20_3-0.0070.7540.789
speciesOdoribacter_unclassified-0.0070.7570.79
genusPeptoniphilus-0.0070.7770.809
genusCollinsella-0.0070.7780.809
genusPropionibacterium0.0060.8050.835
speciesBacteroides_xylanisolvens0.0050.8170.846
speciesLactococcus_phage_bIL67-0.0050.8190.846
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0050.8390.865
speciesButyrivibrio_unclassified-0.0040.8480.87
speciesLactococcus_phage_phi70.0040.8480.87
speciesBacteroides_salyersiae0.0040.8520.872
speciesErysipelotrichaceae_bacterium_3_1_530.0040.8610.88
genusClostridiaceae_noname-0.0030.8850.9
speciesClostridiaceae_bacterium_JC118-0.0030.8850.9
speciesErysipelotrichaceae_bacterium_6_1_45-0.0030.8940.907
speciesCollinsella_aerofaciens0.0030.9050.917
speciesLactococcus_phage_jm20.0020.9250.935
orderPseudomonadales0.0020.9340.94
speciesPrevotella_stercorea0.0020.9340.94
speciesCollinsella_tanakaei0.0010.9530.957
speciesHoldemania_unclassified0.0010.9550.957
speciesLactococcus_phage_P6800.0010.9780.978
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
ObesityDenmark1691230.06031200344440.05624966350120.0374908460697431914.2021
Type II diabetesDenmark752770.0626665161740.05644718739170.0642794905325807626.4726
Ulcerative colitisSpain78660.05793912464110.06406546400680.129944546265821827.1096
Rheumatoid arthritisChina127980.09728415028980.1013562880010.2394781139531014633.8347
Crohns diseaseSpain17660.06887930747350.06406546400680.3018539934591934164.3092
Liver cirrhosisChina1201140.09964543638250.07991334133330.5908319724752541385.3673
Type II diabetesChina1831850.08069153421810.08297178089050.6880116940062475081.7938
Colorectal cancerAustria64350.1060682329950.08441037462020.8006436830232509384.8998
Type II diabetesSweden53920.08713455877320.08690249357590.8836898948692643889.5293
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382