MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 09:46:01 PST
Job id & description: 2372, ada3
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0002_GL00351672480817CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0127_GL00339002482395CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0012_GL01514852493930CompleteK01488COG1816FirmicutesDorea100.0100.0100.0
MH0196_GL01251072496190CompleteK01488COG1816FirmicutesDorea100.0100.0100.0
MH0402_GL00703452538747Lack 3'-endK01488COG1816unknownunknown100.0100.0100.0
T2D-11A_GL01572262517841CompleteK01488COG1816unknownunknown100.0100.0100.0
T2D-63A_GL00692372505112CompleteK01488COG1816FirmicutesBlautia100.0100.0100.0
V1.CD12-3_GL00142692514589CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.CD54-0_GL00378162528294CompleteK01488COG1816unknownunknown100.0100.0100.0
N051A_GL00011322571847CompleteK01488COG1816unknownunknown100.0100.0100.0
NLM007_GL00093062571365Lack 5'-endK01488COG1816Proteobacteriaunknown100.0100.0100.0
V1.FI17_GL01396002542328CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.CD54-0_GL01287552541858CompleteK01488COG1816FirmicutesClostridium100.0100.0100.0
MH0088_GL00072812575704CompleteK01488COG1816FirmicutesRuminococcus100.0100.0100.0
V1.FI18_GL00175672584119CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0016_GL00151932589192CompleteK01488COG1816FirmicutesRuminococcus100.0100.0100.0
T2D-31A_GL00416832572505CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.CD54-0_GL00066132541819CompleteK01488COG1816FirmicutesClostridium100.0100.0100.0
V1.UC58-0_GL00263642585113Lack 5'-endK01488COG1816FirmicutesRuminococcus100.0100.0100.0
763860675-stool1_revised2602076CompleteK00571NOG10100unknownunknown100.0100.0100.0
MH0006_GL02103102560637CompleteK01488COG1816FirmicutesRuminococcus100.0100.0100.0
MH0135_GL00586412576535CompleteK01500NOG70183;NOG18209unknownunknown100.0100.0100.0
V1.CD46-0_GL00985262541757CompleteK01488COG1816Firmicutesunknown100.0100.0100.0
V1.CD12-3_GL00437712640833Lack 5'-endK01488COG1816Firmicutesunknown100.0100.0100.0
MH0035_GL00116552589350CompleteK01488COG1816FirmicutesButyrivibrio100.0100.0100.0
MH0233_GL00605532577968CompleteK01488COG1816Firmicutesunknown100.0100.0100.0
MH0333_GL00993792579320CompleteK01488COG1816Firmicutesunknown100.0100.0100.0
O2.CD3-0-PT_GL01686622581748CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0433_GL01255102668945Lack both endsK01488COG1816unknownunknown100.0100.0100.0
SZEY-81A_GL00744762689529Lack 5'-endK01485COG0402ProteobacteriaActinobacillus100.0100.0100.0
MH0036_GL00072792617857CompleteK01488COG1816unknownunknown100.0100.0100.0
445972.ANACOL_034272602551CompleteK01488COG1816FirmicutesAnaerotruncus100.0100.0100.0
O2.UC11-1_GL00740272654339CompleteK01488COG1816FirmicutesDorea100.0100.0100.0
V1.UC17-2_GL00091692489874CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0125_GL00592272604590CompleteK01488COG1816unknownunknown100.0100.0100.0
T2D-14A_GL01186102719716Lack 5'-endK01485COG0402ProteobacteriaHaemophilus100.0100.0100.0
V1.UC27-0_GL01529462570430CompleteK01488COG1816unknownunknown100.0100.0100.0
DOM024_GL00369862688667Lack 5'-endK02508COG2207BacteroidetesBacteroides100.0100.0100.0
MH0005_GL00055822677319CompleteK01488COG1816FirmicutesButyrivibrio100.0100.0100.0
MH0206_GL01012692591876CompleteK01488COG1816unknownunknown100.0100.0100.0
O2.CD3-0-PT_GL00880802699866CompleteK01488COG1816unknownunknown100.0100.0100.0
O2.CD3-0-PT_GL01833362714709CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.CD21-0_GL00419142701392CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.FI26_GL01008212717186Lack 5'-endK01488COG1816FirmicutesButyrivibrio100.0100.0100.0
MH0021_GL00472212722421CompleteunknownNOG83235unknownunknown100.0100.0100.0
MH0239_GL01305352695921CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.FI06_GL00614832555694CompleteK11991COG0590unknownunknown100.0100.0100.0
MH0055_GL00189982737863CompleteK00571NOG10100FirmicutesCoprococcus100.0100.0100.0
MH0090_GL00426032633200CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0386_GL01442892743134CompleteK00571NOG10100FirmicutesCoprococcus100.0100.0100.0
T2D-113A_GL00358382749692CompleteK01485;K01500COG0590unknownunknown100.0100.0100.0
MH0174_GL00716702679728CompleteK01488COG1816unknownunknown100.0100.0100.0
V1.UC23-0_GL00344262747766CompleteK00571NOG10100unknownunknown100.0100.0100.0
MH0098_GL01366892738389CompleteK00571NOG10100FirmicutesCoprococcus100.0100.0100.0
O2.UC6-2_GL00446312792046CompleteK01500COG0590unknownunknown100.0100.0100.0
MH0204_GL01701182864223CompleteK01488COG1816unknownunknown100.0100.0100.0
MH0211_GL00238722620424CompleteK11991COG0590unknownunknown100.0100.0100.0
MH0426_GL01021482836491CompleteK02508COG2207Bacteroidetesunknown100.0100.0100.0
MH0047_GL00327562830143CompleteunknownCOG2207BacteroidetesBacteroides100.0100.0100.0
MH0144_GL01128602831692CompleteunknownCOG2207BacteroidetesBacteroides100.0100.0100.0
MH0012_GL01325362677592CompleteK01485COG0590unknownunknown100.0100.0100.0
667015.Bacsa_19572844774CompleteunknownCOG2207BacteroidetesBacteroides100.0100.0100.0
O2.UC48-0_GL03033942901234CompleteunknownNOG320626FirmicutesBlautia100.0100.0100.0
SZEY-41A_GL00660793018247Lack 3'-endK01485COG0402ProteobacteriaHaemophilus100.0100.0100.0
O2.CD1-0_GL01938402948305CompleteK01488COG1816FirmicutesStreptococcus100.0100.0100.0
MH0277_GL00177322944779CompleteK01487COG0590unknownunknown100.0100.0100.0
V1.UC56-0_GL00304432952298Lack 5'-endK01500COG0590unknownunknown100.0100.0100.0
MH0128_GL00600052990966Lack 3'-endK01488COG1816unknownunknown100.0100.0100.0
MH0199_GL01542082832626CompleteK01489COG0590unknownunknown100.0100.0100.0
MH0305_GL01188552834229CompleteK01489COG0590unknownunknown100.0100.0100.0
T2D-61A_GL00470873099657Lack 3'-endK01488COG1816unknownunknown100.0100.0100.0
V1.FI02_GL00822513047518CompleteK01500COG0590unknownunknown100.0100.0100.0
MH0433_GL00218903044543CompleteK01500COG0590unknownunknown100.0100.0100.0
O2.UC8-0_GL01576633046619CompleteK01500COG0590unknownunknown100.0100.0100.0
T2D-134A_GL00167553050725CompleteK01500COG0590unknownunknown100.0100.0100.0
MH0191_GL01638543104919CompleteK01489COG0590Proteobacteriaunknown100.0100.0100.0
MH0106_GL00844223168886Lack 5'-endK05810COG1496BacteroidetesBacteroides100.0100.0100.0
N003A_GL00080363114912CompleteK01489;K11991COG0590Proteobacteriaunknown100.0100.0100.0
MH0020_GL00052363102265CompleteK11991COG0590Proteobacteriaunknown100.0100.0100.0
MH0268_GL01393613122433CompleteK11991COG0590Proteobacteriaunknown100.0100.0100.0
V1.UC50-1_GL00514423259383Lack 3'-endK01488COG1816unknownunknown100.0100.0100.0
MH0094_GL00546423297286CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
V1.CD18-3_GL00232933421966Lack 5'-endK01485COG0402ProteobacteriaHaemophilus100.0100.0100.0
MH0173_GL00544693431716CompleteK06017COG0590unknownunknown100.0100.0100.0
MH0390_GL01617713334686Lack 5'-endK03652COG2094unknownunknown100.0100.0100.0
MH0239_GL01279093541470CompleteunknownNOG320626;COG4977unknownunknown100.0100.0100.0
T2D-192A_GL00691713479786Lack 5'-endK00571NOG10100unknownunknown100.0100.0100.0
411467.BACCAP_003553555507CompleteK01485COG0590FirmicutesPseudoflavonifractor100.0100.0100.0
521000.PROVRETT_089913630777CompleteunknownCOG2207ProteobacteriaProvidencia100.0100.0100.0
537013.CLOSTMETH_004553592925CompleteK06017COG0590FirmicutesClostridium100.0100.0100.0
V1.CD12-3_GL01147313623191CompleteK06017COG0590FirmicutesClostridium100.0100.0100.0
MH0274_GL00111323579449CompleteK01500COG0590FirmicutesClostridium100.0100.0100.0
MH0008_GL00160753782546CompleteK05810COG1496ProteobacteriaKlebsiella100.0100.0100.0
MH0014_GL00472053782773CompleteK05810COG1496ProteobacteriaEscherichia100.0100.0100.0
NLM027_GL00233443797332CompleteK05810COG1496ProteobacteriaEnterobacter100.0100.0100.0
BGI003A_GL00174763797613Lack 5'-endK01488COG1816FirmicutesBlautia100.0100.0100.0
DOM005_GL00431853797052CompleteK05810COG1496ProteobacteriaEnterobacter100.0100.0100.0
MH0277_GL00004813787459CompleteK05810COG1496ProteobacteriaKlebsiella100.0100.0100.0
MH0260_GL00074853787017CompleteK05810COG1496ProteobacteriaKlebsiella100.0100.0100.0
DOF006_GL00184973777713CompleteK01500COG0590FirmicutesClostridium100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyBacteroidaceae0.5528.45e-1501.99e-147
genusBacteroides0.5528.45e-1501.99e-147
speciesBacteroides_thetaiotaomicron0.4213.87e-816.09e-79
classBacteroidia0.4191.68e-801.34e-78
orderBacteroidales0.4191.68e-801.34e-78
phylumBacteroidetes0.4191.7e-801.34e-78
genusDorea-0.4185.38e-803.63e-78
phylumActinobacteria-0.4121.49e-777.81e-76
classActinobacteria-0.4121.49e-777.81e-76
orderCoriobacteriales-0.4021e-734.29e-72
familyCoriobacteriaceae-0.4021e-734.29e-72
speciesBifidobacterium_adolescentis-0.3987.42e-722.92e-70
phylumFirmicutes-0.3959.01e-713.09e-69
speciesCollinsella_aerofaciens-0.3959.16e-713.09e-69
speciesDorea_longicatena-0.3933.99e-701.26e-68
genusCollinsella-0.3833.14e-669.26e-65
genusCoprococcus-0.3692.35e-616.52e-60
speciesEubacterium_hallii-0.3692.74e-617.18e-60
familyRuminococcaceae-0.3596.64e-581.65e-56
genusBifidobacterium-0.3588.45e-581.99e-56
orderBifidobacteriales-0.3581.03e-572.21e-56
familyBifidobacteriaceae-0.3581.03e-572.21e-56
speciesSubdoligranulum_unclassified-0.3559.37e-571.92e-55
genusSubdoligranulum-0.3491.58e-543.11e-53
speciesBacteroides_xylanisolvens0.3469.13e-541.72e-52
speciesCoprococcus_catus-0.3437.49e-531.36e-51
classClostridia-0.3413.6e-526.07e-51
orderClostridiales-0.3413.6e-526.07e-51
speciesCoprococcus_comes-0.3383.55e-515.78e-50
speciesAnaerostipes_hadrus-0.3278.8e-481.38e-46
speciesBacteroides_ovatus0.3247.77e-471.18e-45
speciesRuminococcus_obeum-0.3183.25e-454.79e-44
speciesBacteroides_stercoris0.3137.13e-441.02e-42
genusParabacteroides0.3137.88e-441.09e-42
speciesDorea_formicigenerans-0.3051.46e-411.97e-40
speciesMethanobrevibacter_smithii-0.3021.12e-401.47e-39
genusOlsenella-0.2964.65e-395.93e-38
speciesOlsenella_unclassified-0.2956.41e-397.96e-38
genusMethanobrevibacter-0.2959.67e-391.17e-37
classMethanobacteria-0.2924.81e-385.41e-37
orderMethanobacteriales-0.2924.81e-385.41e-37
familyMethanobacteriaceae-0.2924.81e-385.41e-37
phylumEuryarchaeota-0.2918.72e-389.57e-37
speciesRuminococcus_sp_5_1_39BFAA-0.2861.61e-361.73e-35
speciesBifidobacterium_longum-0.285.14e-355.39e-34
speciesEubacterium_siraeum-0.2763.89e-343.99e-33
genusErysipelotrichaceae_noname-0.2732.12e-332.13e-32
speciesBacteroides_nordii0.2717.39e-337.27e-32
genusAnaerostipes-0.271.04e-321e-31
speciesStreptococcus_thermophilus-0.2669.1e-328.59e-31
classErysipelotrichia-0.2621.01e-308.99e-30
orderErysipelotrichales-0.2621.01e-308.99e-30
familyErysipelotrichaceae-0.2621.01e-308.99e-30
speciesBacteroides_fragilis0.2586.4e-305.59e-29
genusPseudoflavonifractor-0.2571.35e-291.14e-28
speciesPseudoflavonifractor_capillosus-0.2571.35e-291.14e-28
speciesEubacterium_biforme-0.2521.59e-281.32e-27
speciesKlebsiella_pneumoniae0.256.23e-285.07e-27
speciesEubacterium_ramulus-0.2472.25e-271.8e-26
speciesBacteroides_intestinalis0.2463.14e-272.47e-26
speciesClostridium_citroniae0.2463.41e-272.64e-26
speciesMitsuokella_unclassified-0.2463.94e-273e-26
speciesBacteroides_vulgatus0.2441.06e-267.94e-26
genusKlebsiella0.2441.17e-268.63e-26
genusMitsuokella-0.2422.4e-261.74e-25
speciesErysipelotrichaceae_bacterium_21_3-0.2391.26e-259.01e-25
genusRuminococcus-0.2382.13e-251.5e-24
familyPorphyromonadaceae0.2372.71e-251.88e-24
phylumFusobacteria0.2357.39e-254.91e-24
classFusobacteriia0.2357.39e-254.91e-24
orderFusobacteriales0.2357.39e-254.91e-24
speciesClostridium_bolteae0.2349.32e-256.11e-24
familyFusobacteriaceae0.2322.36e-241.53e-23
genusFlavonifractor0.2314.97e-243.13e-23
speciesFlavonifractor_plautii0.2314.97e-243.13e-23
speciesClostridiales_bacterium_1_7_47FAA0.2264.65e-232.89e-22
genusFusobacterium0.2258.01e-234.91e-22
phylumProteobacteria0.2241.1e-226.66e-22
genusButyrivibrio-0.2241.18e-227.05e-22
speciesClostridium_nexile0.2231.37e-228.08e-22
familyRikenellaceae0.2214.28e-222.46e-21
genusAlistipes0.2214.28e-222.46e-21
speciesEubacterium_rectale-0.226.98e-223.97e-21
familyLachnospiraceae-0.2181.36e-217.64e-21
speciesClostridium_leptum-0.2172.43e-211.35e-20
phylumVerrucomicrobia-0.2163.61e-211.87e-20
classVerrucomicrobiae-0.2163.61e-211.87e-20
orderVerrucomicrobiales-0.2163.61e-211.87e-20
familyVerrucomicrobiaceae-0.2163.61e-211.87e-20
genusAkkermansia-0.2163.61e-211.87e-20
speciesAkkermansia_muciniphila-0.2163.61e-211.87e-20
speciesAnaerotruncus_unclassified-0.2163.88e-211.99e-20
speciesBacteroides_salyersiae0.2154.47e-212.27e-20
speciesRuminococcus_gnavus0.213.86e-201.94e-19
speciesClostridium_symbiosum0.2097.74e-203.85e-19
familyActinomycetaceae-0.2045.15e-192.53e-18
genusActinomyces-0.2036.29e-193.06e-18
speciesButyrivibrio_unclassified-0.2036.66e-193.19e-18
classGammaproteobacteria0.2036.7e-193.19e-18
speciesClostridium_hathewayi0.2021.29e-186.09e-18
speciesBifidobacterium_catenulatum-0.2011.56e-187.29e-18
orderEnterobacteriales0.1993.33e-181.53e-17
familyEnterobacteriaceae0.1993.33e-181.53e-17
genusCatenibacterium-0.1984.66e-182.09e-17
speciesCatenibacterium_mitsuokai-0.1984.66e-182.09e-17
speciesBacteroides_caccae0.1985.9e-182.63e-17
genusBurkholderiales_noname0.1942.47e-171.08e-16
speciesBurkholderiales_bacterium_1_1_470.1942.47e-171.08e-16
speciesBifidobacterium_animalis-0.1942.77e-171.2e-16
familyBurkholderiales_noname0.1933.32e-171.42e-16
speciesMethanobrevibacter_unclassified-0.191.25e-165.32e-16
speciesLachnospiraceae_bacterium_5_1_63FAA-0.1873.23e-161.36e-15
genusParasutterella0.1873.56e-161.47e-15
speciesParasutterella_excrementihominis0.1873.56e-161.47e-15
genusRuminococcaceae_noname-0.1873.84e-161.56e-15
speciesRuminococcaceae_bacterium_D16-0.1873.84e-161.56e-15
familyEubacteriaceae-0.1865.94e-162.4e-15
genusEubacterium-0.1856.85e-162.74e-15
speciesBacteroides_oleiciplenus0.1857.59e-163.01e-15
speciesAlistipes_putredinis0.1858.16e-163.21e-15
phylumViruses_noname-0.1831.57e-156.07e-15
classViruses_noname-0.1831.57e-156.07e-15
speciesFusobacterium_mortiferum0.1812.86e-151.1e-14
speciesSutterella_wadsworthensis-0.1812.91e-151.11e-14
speciesBacteroides_finegoldii0.1813.56e-151.34e-14
speciesParabacteroides_goldsteinii0.1795.44e-152.04e-14
genusEscherichia0.1781.01e-143.75e-14
speciesEscherichia_coli0.1771.35e-144.98e-14
speciesParabacteroides_distasonis0.1761.82e-146.66e-14
familySiphoviridae-0.1752.14e-147.77e-14
speciesBacteroides_massiliensis0.1718.33e-143e-13
orderActinomycetales-0.171.27e-134.54e-13
speciesBacteroides_cellulosilyticus0.1691.62e-135.75e-13
speciesRuminococcus_torques-0.1692.14e-137.54e-13
speciesBilophila_unclassified0.1692.19e-137.66e-13
speciesBacteroides_uniformis0.1682.36e-138.19e-13
genusBilophila0.1673.11e-131.07e-12
speciesFusobacterium_ulcerans0.1673.22e-131.1e-12
genusAdlercreutzia-0.1673.29e-131.11e-12
speciesAdlercreutzia_equolifaciens-0.1673.29e-131.11e-12
familyAcidaminococcaceae-0.1631.14e-123.82e-12
speciesStreptococcus_parasanguinis-0.1621.75e-125.82e-12
genusClostridiales_noname0.1612.2e-127.26e-12
genusSutterella-0.1612.44e-128e-12
speciesClostridium_asparagiforme0.163.05e-129.93e-12
speciesPropionibacterium_freudenreichii-0.163.57e-121.15e-11
familyLactobacillaceae-0.1594.34e-121.39e-11
speciesCoprococcus_sp_ART55_1-0.1594.71e-121.5e-11
genusMegamonas0.1585.98e-121.88e-11
speciesMegamonas_unclassified0.1585.99e-121.88e-11
speciesFusobacterium_varium0.1579.61e-123e-11
speciesLactococcus_lactis-0.1551.43e-114.44e-11
genusLactococcus-0.1542.05e-116.32e-11
genusLactobacillus-0.1542.1e-116.44e-11
orderCaudovirales-0.1532.63e-118.01e-11
speciesLachnospiraceae_bacterium_3_1_46FAA-0.1532.9e-118.77e-11
genusBlautia-0.1532.92e-118.78e-11
orderLactobacillales-0.1524.44e-111.33e-10
speciesC2likevirus_unclassified-0.1514.61e-111.37e-10
speciesBifidobacterium_bifidum-0.1514.78e-111.41e-10
genusPhascolarctobacterium-0.157.03e-112.05e-10
speciesPhascolarctobacterium_succinatutens-0.157.03e-112.05e-10
genusC2likevirus-0.157.54e-112.18e-10
genusDialister-0.1498.59e-112.47e-10
classBacilli-0.1499.24e-112.64e-10
genusPropionibacterium-0.1481.2e-103.41e-10
genusBarnesiella-0.1471.5e-104.21e-10
speciesBarnesiella_intestinihominis-0.1471.5e-104.21e-10
speciesHaemophilus_parainfluenzae0.1462.3e-106.42e-10
genusHaemophilus0.1462.57e-107.14e-10
speciesLactobacillus_casei_paracasei-0.1452.86e-107.89e-10
orderPasteurellales0.1453.37e-109.19e-10
familyPasteurellaceae0.1453.37e-109.19e-10
speciesLactococcus_phage_P680-0.1443.97e-101.08e-09
speciesAnaerotruncus_colihominis0.1435.64e-101.52e-09
speciesMegamonas_rupellensis0.1435.71e-101.53e-09
speciesCoprobacillus_unclassified0.1426.7e-101.79e-09
genusButyricimonas0.1419.13e-102.41e-09
speciesButyricimonas_synergistica0.1419.13e-102.41e-09
genusSiphoviridae_noname-0.141.29e-093.38e-09
speciesLachnospiraceae_bacterium_8_1_57FAA-0.1391.4e-093.65e-09
classDeltaproteobacteria0.1391.72e-094.41e-09
orderDesulfovibrionales0.1391.72e-094.41e-09
familyDesulfovibrionaceae0.1391.72e-094.41e-09
speciesBilophila_wadsworthia0.1345.56e-091.42e-08
speciesAlistipes_shahii0.1346.57e-091.67e-08
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speciesDialister_invisus-0.1111.42e-062.93e-06
genusEnterobacter0.1111.46e-063e-06
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speciesClostridium_sp_ATCC_BAA_4420.1073.33e-066.49e-06
speciesAlistipes_unclassified-0.1073.58e-066.95e-06
genusPyramidobacter0.1064.36e-068.4e-06
speciesPyramidobacter_piscolens0.1064.36e-068.4e-06
speciesEubacterium_eligens0.1064.52e-068.67e-06
speciesParabacteroides_johnsonii0.1055.73e-061.09e-05
phylumSynergistetes0.1055.9e-061.11e-05
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familySynergistaceae0.1055.9e-061.11e-05
speciesBacteroides_clarus0.1046.09e-061.14e-05
speciesEggerthella_unclassified0.1047.02e-061.31e-05
speciesTuricibacter_unclassified-0.1047.1e-061.32e-05
speciesAlistipes_senegalensis-0.1037.94e-061.47e-05
genusLeuconostoc-0.1029.73e-061.79e-05
speciesBacteroides_dorei0.1021.06e-051.95e-05
classBetaproteobacteria0.11.62e-052.96e-05
speciesKlebsiella_unclassified0.0991.92e-053.5e-05
speciesStreptococcus_pasteurianus0.0982.17e-053.94e-05
speciesMegamonas_hypermegale0.0972.67e-054.83e-05
orderBurkholderiales0.0972.9e-055.22e-05
speciesButyrivibrio_crossotus-0.0962.97e-055.33e-05
speciesBacteroides_coprocola0.0953.89e-056.95e-05
speciesSutterella_parvirubra0.0953.92e-056.98e-05
genusEggerthella0.0954.25e-057.54e-05
speciesStreptococcus_sanguinis-0.0945.08e-058.98e-05
familyBacillales_noname-0.0935.32e-059.33e-05
genusGemella-0.0935.32e-059.33e-05
speciesLachnospiraceae_bacterium_1_1_57FAA0.0935.74e-050.0001
speciesCitrobacter_freundii0.0935.89e-050.000103
speciesBacteroides_pectinophilus-0.0926.43e-050.000112
speciesCitrobacter_unclassified0.0927.03e-050.000122
speciesParaprevotella_clara-0.0927.24e-050.000125
orderBacillales-0.099.26e-050.000159
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.099.37e-050.00016
genusCitrobacter0.0880.000130.000221
speciesParabacteroides_unclassified0.0880.000130.000221
familyPrevotellaceae-0.0880.000140.000237
speciesLactobacillus_salivarius0.0880.0001430.000241
familyClostridiaceae0.0870.0001660.000279
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speciesStreptococcus_vestibularis-0.0860.0001880.000314
speciesWeissella_confusa0.0850.0002360.000392
speciesBacteroides_sp_3_1_190.0850.0002530.000419
speciesDialister_succinatiphilus-0.0840.0002550.000421
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genusGordonibacter-0.0840.0002710.000443
speciesGordonibacter_pamelaeae-0.0840.0002710.000443
speciesLactococcus_phage_phi7-0.0840.0002720.000443
speciesEubacterium_sp_3_1_310.0840.0002780.000451
speciesLactococcus_phage_jm2-0.0840.0002920.000472
speciesParaprevotella_xylaniphila-0.0830.0003020.000486
speciesMegamonas_funiformis0.0810.0004520.000726
speciesVeillonella_atypica0.080.0005110.000818
speciesStreptococcus_infantarius0.080.0005150.000821
genusAcidaminococcaceae_unclassified-0.0790.0006410.00102
familyMicrococcaceae-0.0780.0007380.00117
genusRothia-0.0780.0007570.00119
speciesLactobacillus_acidophilus-0.0770.0008480.00133
speciesCollinsella_tanakaei0.0760.0009520.00149
speciesRoseburia_hominis-0.0750.001120.00175
speciesDesulfovibrio_piger-0.0750.001140.00178
speciesBifidobacterium_dentium-0.0750.001170.00182
speciesStreptococcus_gordonii-0.0750.001230.0019
genusCoprobacter-0.0730.00150.00231
speciesCoprobacter_fastidiosus-0.0730.00150.00231
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speciesBifidobacterium_breve-0.0730.001670.00255
speciesClostridium_bartlettii-0.0720.001710.0026
speciesRoseburia_intestinalis-0.0720.001740.00264
speciesBifidobacterium_angulatum-0.0720.001770.00268
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0720.001830.00276
speciesRothia_mucilaginosa-0.0710.00210.00316
genusParvimonas-0.0710.002250.00337
speciesParvimonas_unclassified-0.0710.002270.00339
speciesStreptococcus_salivarius-0.070.002430.00362
genusSolobacterium-0.0690.002970.00439
speciesSolobacterium_moorei-0.0690.002970.00439
speciesRuminococcus_lactaris-0.0680.003060.00451
genusClostridiaceae_noname0.0670.00370.00542
speciesClostridiaceae_bacterium_JC1180.0670.00370.00542
speciesLactobacillus_gasseri-0.0660.004440.00649
genusDesulfovibrio-0.0650.004870.00709
speciesEscherichia_unclassified0.0650.004920.00715
familySutterellaceae0.0650.004990.00722
speciesOdoribacter_laneus-0.0640.005470.0079
speciesClostridium_perfringens0.0640.005560.008
speciesBacteroides_faecis0.0640.005880.00844
speciesGemella_morbillorum-0.0630.006260.00895
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genusPeptostreptococcus-0.0630.006830.00971
speciesBacteroides_eggerthii0.0620.006860.00972
familyOscillospiraceae0.0620.006980.00983
genusOscillibacter0.0620.006980.00983
speciesLactobacillus_plantarum-0.0620.007780.0109
speciesClostridium_spiroforme-0.0610.008170.0114
speciesCollinsella_intestinalis0.0610.008260.0115
speciesAlistipes_onderdonkii0.0610.008480.0118
genusWeissella0.060.009010.0125
speciesEnterococcus_faecium-0.060.009570.0132
genusMegasphaera0.060.009620.0133
speciesAcidaminococcus_unclassified-0.060.00990.0136
familyClostridiales_Family_XI_Incertae_Sedis-0.060.010.0137
familyEnterococcaceae-0.0560.01540.0211
speciesRuminococcus_sp_JC304-0.0560.01550.0211
speciesEggerthella_sp_1_3_56FAA-0.0560.01590.0216
speciesKlebsiella_sp_MS_92_30.0550.01740.0235
speciesErysipelotrichaceae_bacterium_6_1_45-0.0550.01740.0235
speciesRoseburia_inulinivorans0.0550.01770.0239
genusEnterococcus-0.0550.01790.0241
speciesOscillibacter_sp_KLE_17280.0540.01960.0263
speciesEnterobacter_aerogenes0.0530.02090.0279
speciesEnterobacteria_phage_HK5440.0530.02110.0281
speciesLachnospiraceae_bacterium_2_1_58FAA0.0530.02240.0298
speciesHoldemania_sp_AP20.0520.02350.0312
speciesOscillibacter_unclassified0.0520.02440.0323
speciesPrevotella_bivia0.0520.02540.0335
speciesLachnospiraceae_bacterium_6_1_63FAA0.0520.02590.0341
speciesBacteroides_sp_2_1_220.0510.02680.0351
speciesKlebsiella_phage_KP360.0510.02750.036
genusCampylobacter0.0510.02840.037
familyCampylobacteraceae0.050.03030.0394
classEpsilonproteobacteria0.050.03130.0405
orderCampylobacterales0.050.03130.0405
speciesDesulfovibrio_desulfuricans-0.0490.03270.0422
speciesLactococcus_phage_936_sensu_lato-0.0490.03430.0441
genusTunalikevirus0.0480.03630.0466
speciesHaemophilus_paraphrohaemolyticus0.0480.03790.0485
speciesClostridium_clostridioforme0.0480.03910.0499
speciesBacteroides_salanitronis-0.0480.03960.0504
speciesEubacterium_ventriosum-0.0470.04030.0511
speciesCampylobacter_concisus0.0470.04060.0514
speciesPeptostreptococcus_stomatis-0.0470.04120.052
speciesStreptococcus_mitis_oralis_pneumoniae-0.0470.04130.052
speciesAlistipes_sp_AP11-0.0470.04140.052
speciesBacteroides_barnesiae-0.0470.04370.0547
genusAcidaminococcus-0.0460.04720.0589
speciesAggregatibacter_segnis0.0460.04740.059
speciesFusobacterium_nucleatum0.0450.04920.0611
genusAggregatibacter0.0450.05130.0636
genusMorganella0.0450.05270.0649
speciesMorganella_morganii0.0450.05270.0649
speciesPrevotella_stercorea0.0430.0660.0811
speciesLactobacillus_reuteri-0.0420.06770.083
speciesCollinsella_unclassified0.0410.07830.0957
speciesPrevotella_copri-0.0380.1010.123
genusFaecalibacterium-0.0380.1050.127
speciesFaecalibacterium_prausnitzii-0.0380.1050.127
familyLeuconostocaceae-0.0370.1090.132
genusRoseburia0.0370.1110.134
speciesMegasphaera_elsdenii-0.0360.1160.14
speciesHoldemania_filiformis-0.0360.1180.142
genusOxalobacter-0.0360.1220.146
speciesOxalobacter_formigenes-0.0360.1220.146
familyOxalobacteraceae-0.0360.1230.147
speciesStreptococcus_anginosus-0.0350.1260.15
genusLambdalikevirus0.0350.1330.158
genusProteus0.0340.1440.17
speciesPeptostreptococcus_anaerobius-0.0330.1520.179
speciesErysipelotrichaceae_bacterium_3_1_530.0320.160.188
speciesEggerthella_lenta-0.0310.1780.209
familyVeillonellaceae-0.0310.1810.212
speciesEnterococcus_faecalis-0.030.1910.223
familyMyoviridae0.030.1930.225
speciesBacteroides_sp_4_3_47FAA0.030.20.233
speciesLeuconostoc_lactis0.0290.2150.249
speciesProteus_mirabilis0.0290.2170.251
speciesLachnospiraceae_bacterium_1_4_56FAA0.0280.2310.267
speciesLactobacillus_fermentum-0.0270.240.276
speciesOscillibacter_sp_KLE_17450.0260.2580.296
speciesParabacteroides_sp_D13-0.0260.2620.3
genusStaphylococcus-0.0250.2810.321
speciesLactobacillus_vaginalis-0.0230.3190.364
speciesHaemophilus_sputorum0.0220.3320.378
familySuccinivibrionaceae-0.0220.3450.391
speciesLactococcus_phage_bIL67-0.0220.3460.392
speciesLactobacillus_amylovorus-0.0210.360.407
genusSuccinatimonas-0.0210.3630.408
speciesSuccinatimonas_hippei-0.0210.3630.408
speciesLactobacillus_sanfranciscensis0.0210.3660.41
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0210.3750.419
familyStaphylococcaceae-0.020.3870.432
genusPrevotella-0.020.390.434
speciesLachnospiraceae_bacterium_5_1_57FAA0.020.3990.443
speciesAcidaminococcus_fermentans-0.0190.4050.449
speciesPorphyromonas_asaccharolytica-0.0190.4230.465
orderAeromonadales0.0180.4240.465
familyViruses_noname-0.0180.4250.465
genusViruses_noname-0.0180.4250.465
speciesCoriobacteriaceae_bacterium_phI-0.0180.4250.465
genusSutterellaceae_unclassified0.0180.4290.469
genusPeptoniphilus0.0180.4410.481
speciesBacteroides_fluxus0.0180.4440.483
genusCoriobacteriaceae_noname-0.0180.4490.485
speciesCoprobacillus_sp_D6-0.0180.4490.485
speciesWeissella_cibaria0.0170.450.485
speciesKlebsiella_oxytoca0.0170.450.485
speciesClostridium_sp_KLE_1755-0.0170.4580.492
genusPorphyromonas-0.0170.4640.498
speciesMegasphaera_unclassified0.0160.4910.525
speciesHoldemania_unclassified-0.0160.4920.525
genusActinobacillus0.0160.4950.526
speciesActinobacillus_unclassified0.0160.4950.526
genusMyoviridae_noname0.0140.5360.569
speciesRuminococcus_callidus-0.0140.5460.578
speciesLactobacillus_mucosae0.0140.5530.584
familyPodoviridae-0.0130.5850.615
genusHoldemania0.0130.5850.615
speciesParabacteroides_sp_20_30.0110.6250.656
speciesStreptococcus_lutetiensis0.010.650.68
speciesPorphyromonas_uenonis0.010.6610.69
speciesLactobacillus_oris-0.010.6630.691
speciesEubacterium_dolichum0.010.6750.702
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.010.6780.703
speciesLactococcus_garvieae0.0090.6990.724
speciesAlistipes_sp_HGB5-0.0090.7090.732
speciesEubacterium_limosum-0.0090.7110.733
speciesBacteroides_coprophilus-0.0080.7320.753
speciesCoprobacillus_sp_29_1-0.0080.7370.756
speciesStreptococcus_australis0.0070.760.778
speciesLactobacillus_crispatus-0.0070.7780.795
speciesSlackia_piriformis-0.0060.7820.797
speciesAcidaminococcus_intestini0.0060.7890.803
genusSlackia-0.0060.7930.805
genusButyricicoccus-0.0060.7990.808
speciesButyricicoccus_pullicaecorum-0.0060.7990.808
speciesDorea_unclassified-0.0050.8360.843
speciesStreptococcus_phage_Sfi21-0.0040.8580.863
speciesBacteroides_sp_1_1_6-0.0030.8890.893
speciesAlistipes_indistinctus-0.0020.9150.917
speciesBlautia_producta0.00.9920.992
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesChina1831850.335232151380.2951134221610.0413354802124647821.4085
Colorectal cancerAustria64350.09702056925870.0675873996470.163221830367727924.6278
Type II diabetesDenmark752770.1002066567380.103178784520.1722547571451218639.9449
Rheumatoid arthritisChina127980.2240350358270.20098342980.194233834764873829.1393
Liver cirrhosisChina1201140.3030741573670.3249895227540.1971494877771931064.8661
Type II diabetesSweden53920.07595340892070.09712487703670.3010698147881036035.083
Crohns diseaseSpain17660.1652849901550.1353005618510.4133149684812183572.6018
Ulcerative colitisSpain78660.1212499864940.1353005618510.7771528652512523783.252
ObesityDenmark1691230.1052123395590.1027587612860.7888752348752585985.0317
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382