MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 09:47:50 PST
Job id & description: 2374, guanosine1
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
NOM023_GL0054295564233CompleteK00912COG1663BacteroidetesBacteroides100.0100.0100.0
521095.Apar_09771681344CompleteK03783COG1683;COG0005ActinobacteriaAtopobium100.0100.0100.0
DLF014_GL00393251679193CompleteK03783COG1683;COG0005unknownunknown100.0100.0100.0
T2D-68A_GL00004361680386CompleteK03783COG1683;COG0005unknownunknown100.0100.0100.0
T2D-68A_GL00183331680391CompleteK03783COG1683;COG0005unknownunknown100.0100.0100.0
T2D-68A_GL00668801680395CompleteK03783COG1683;COG0005unknownunknown100.0100.0100.0
V1.FI17_GL01424881620881CompleteK03783COG1683;COG0005unknownunknown100.0100.0100.0
O2.UC48-0_GL00379401657622CompleteK03783COG1683;COG0005unknownunknown100.0100.0100.0
MH0322_GL00293182266682CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC2-2_GL00207992359185Lack 5'-endK03783COG0005FirmicutesClostridium100.0100.0100.0
MH0288_GL00667822433087CompleteK03783COG0005unknownunknown100.0100.0100.0
NLF002_GL00217582477860CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
T2D-33A_GL00488752465733CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC34-2_GL00920692398031Lack 5'-endK03783COG1683;COG0005unknownunknown100.0100.0100.0
MH0062_GL00662982468444CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC60-0_GL00663322628282CompleteK03783COG0005FirmicutesFaecalibacterium100.0100.0100.0
NLM022_GL00876272614095CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0373_GL01145052608371Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
O2.UC44-2_GL02742742655152CompleteK03783COG0005BacteroidetesPorphyromonas100.0100.0100.0
MH0086_GL00202042678327CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC30-0_GL00931162687777CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD55-0_GL00684232777557Lack 5'-endK03783COG0005Firmicutesunknown100.0100.0100.0
MH0260_GL00942512725953CompleteK03815COG0005Proteobacteriaunknown100.0100.0100.0
MH0044_GL00422852722641CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
MH0086_GL00606842723067CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
O2.UC59-2_GL00317322792017CompleteK03783COG0005FirmicutesRuminococcus100.0100.0100.0
MH0407_GL00339792728334Lack 5'-endK03783COG0005FirmicutesButyrivibrio100.0100.0100.0
MH0006_GL00421982783207CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.FI07_GL00621142808547Lack 5'-endK03783COG0005FirmicutesFaecalibacterium100.0100.0100.0
MH0006_GL00582872783210CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0086_GL00695802784281CompleteK03783COG0005unknownunknown100.0100.0100.0
764285508-stool1_revised2844408Lack 5'-endK03783COG0005FirmicutesRoseburia100.0100.0100.0
N083A_GL00016212795541Lack 5'-endK03783COG0005Firmicutesunknown100.0100.0100.0
MH0143_GL01568422800608CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC15-1_GL00181882853291CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0322_GL00521682834465Lack 5'-endK03783COG0005Firmicutesunknown100.0100.0100.0
MH0143_GL00991612863176CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC39-0_GL00342222903567CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC9-0_GL01338412885605Lack 5'-endK03783COG0005FirmicutesRuminococcus100.0100.0100.0
MH0197_GL01714282911214Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0252_GL02238872912136CompleteK03783COG0005unknownunknown100.0100.0100.0
NLM022_GL00410852888588CompleteK03783COG0005FirmicutesEubacterium100.0100.0100.0
O2.UC28-0_GL01807902900677Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0122_GL00800012862756CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0239_GL00419472927840CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0336_GL00590412929355CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
V1.UC63-0_GL02422662968658CompleteK03783COG0005FirmicutesRuminococcus100.0100.0100.0
159753524-stool1_revised2922774CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0088_GL00800262973856CompleteK03783COG0005FirmicutesBlautia100.0100.0100.0
O2.UC15-0_GL00399372980906CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-31A_GL00843192811615CompleteK03783COG1683;COG0005unknownunknown100.0100.0100.0
MH0086_GL01151682909237CompleteK03783COG0005unknownunknown100.0100.0100.0
764143897-stool1_revised3004470Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0369_GL00581712962459Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
O2.UC38-1_GL01593712997911Lack 5'-endK03783COG0005FirmicutesRoseburia100.0100.0100.0
MH0065_GL00228672973580CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0275_GL00180592993490CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0276_GL01019493009633Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0390_GL01429992995569CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0442_GL02452013028736Lack 5'-endK03783COG0005FirmicutesBlautia100.0100.0100.0
MH0119_GL00172303022895CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0124_GL01232693022989Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0247_GL01363753025059CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0349_GL00751193042718CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
521003.COLINT_037762907713CompleteK03783COG1683;COG0005ActinobacteriaCollinsella100.0100.0100.0
DLM023_GL00221523049409CompleteK03783COG0005FirmicutesFaecalibacterium100.0100.0100.0
T2D-62A_GL00605353051188CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
V1.FI23_GL00015283032028Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0245_GL00376913041135CompleteK03783COG0005FirmicutesFaecalibacterium100.0100.0100.0
MH0372_GL01072813043215CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0077_GL00396603054389CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0451_GL00715753077498CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC35-1_GL00837233062232CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0035_GL00599353070244CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0189_GL00317383056190CompleteK03783COG0005unknownunknown100.0100.0100.0
158944319-stool2_revised3051837Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
T2D-61A_GL00369903099655CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0382_GL01587993043468CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0355_GL00919243058918CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0415_GL01473803060334CompleteK03783COG0005unknownunknown100.0100.0100.0
158499257-stool1_revised3068091Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
MH0107_GL00320523038846CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-15A_GL00141183115622Lack 5'-endK03783COG0005BacteroidetesCapnocytophaga100.0100.0100.0
V1.FI32_GL01073653096574Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0011_GL00669273102060CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0373_GL00038993091672CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0183_GL00890203072440Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
MH0439_GL01414383077250CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.CD3-0-PT_GL00029253093637CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD12-3_GL00899873111570CompleteK03783COG0005FirmicutesBlautia100.0100.0100.0
MH0230_GL01499803105595CompleteK03783COG0005FirmicutesEubacterium100.0100.0100.0
MH0239_GL01730103105785CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD21-4_GL00871213095385CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC17-2_GL00617293032445CompleteK03783COG0005unknownunknown100.0100.0100.0
944560.HMPREF9058_18462923975CompleteK03783COG0005ActinobacteriaActinomyces100.0100.0100.0
MH0389_GL00374313076155CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-173A_GL00525253115643Lack 5'-endK03783COG0005FirmicutesRoseburia100.0100.0100.0
V1.UC14-1_GL00470213113258CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0006_GL01263433101917Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
457398.HMPREF0326_011393101473CompleteK03783COG0005ProteobacteriaDesulfovibrio100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
classClostridia0.3781.21e-642.86e-62
orderClostridiales0.3781.21e-642.86e-62
genusPrevotella-0.3624.69e-597.38e-57
speciesPrevotella_copri-0.3573.35e-573.95e-55
familyEubacteriaceae0.3443.47e-532.77e-51
genusEubacterium0.3443.52e-532.77e-51
familyLachnospiraceae0.3346.61e-504.46e-48
familyPrevotellaceae-0.3067.64e-424.51e-40
genusRoseburia0.3021.15e-406.03e-39
speciesEubacterium_rectale0.2998.3e-403.92e-38
speciesBacteroides_uniformis0.2958.61e-393.69e-37
speciesLachnospiraceae_bacterium_5_1_63FAA0.2932.05e-388.06e-37
phylumFirmicutes0.2764.08e-341.48e-32
genusFaecalibacterium0.2637.24e-312.28e-29
speciesFaecalibacterium_prausnitzii0.2637.24e-312.28e-29
genusRuminococcus0.2611.81e-305.34e-29
speciesRuminococcus_sp_5_1_39BFAA0.2571.59e-294.41e-28
speciesRuminococcus_torques0.2422.54e-266.66e-25
genusHoldemania0.2322.91e-247.23e-23
speciesAnaerostipes_hadrus0.2315.4e-241.27e-22
familyRuminococcaceae0.2291.16e-232.61e-22
genusLachnospiraceae_noname0.2272.73e-235.86e-22
speciesRuminococcus_obeum0.2214.5e-229.23e-21
genusEggerthella0.2147.75e-211.52e-19
speciesEggerthella_unclassified0.2121.91e-203.61e-19
speciesRoseburia_intestinalis0.2081.08e-191.96e-18
speciesRoseburia_inulinivorans0.2071.55e-192.71e-18
genusAnaerostipes0.2044.31e-197.27e-18
genusAdlercreutzia0.2011.4e-182.2e-17
speciesAdlercreutzia_equolifaciens0.2011.4e-182.2e-17
genusBlautia0.1961.33e-172.03e-16
speciesEubacterium_hallii0.1882.37e-163.5e-15
classNegativicutes-0.1873.24e-164.5e-15
orderSelenomonadales-0.1873.24e-164.5e-15
speciesPrevotella_stercorea-0.1822.09e-152.82e-14
genusGordonibacter0.1752.22e-142.83e-13
speciesGordonibacter_pamelaeae0.1752.22e-142.83e-13
speciesBacteroides_plebeius-0.1743.72e-144.62e-13
phylumProteobacteria-0.1711.09e-131.32e-12
speciesEubacterium_ventriosum0.171.17e-131.38e-12
classBacteroidia-0.1655.98e-136.61e-12
orderBacteroidales-0.1655.98e-136.61e-12
phylumBacteroidetes-0.1656.02e-136.61e-12
genusMegasphaera-0.1622.04e-122.19e-11
speciesEubacterium_ramulus0.1612.9e-123.04e-11
speciesEggerthella_lenta0.163.98e-124.08e-11
speciesLachnospiraceae_bacterium_1_4_56FAA0.1577.66e-127.69e-11
speciesDorea_formicigenerans0.1561.03e-111.01e-10
familyAcidaminococcaceae-0.1551.44e-111.39e-10
speciesEubacterium_biforme-0.1515.75e-115.43e-10
speciesHoldemania_filiformis0.1481.21e-101.12e-09
speciesRuminococcus_bromii0.1453.37e-103.06e-09
speciesClostridium_citroniae0.1443.81e-103.39e-09
speciesClostridium_asparagiforme0.1419.94e-108.69e-09
genusDorea0.141.09e-099.35e-09
speciesMitsuokella_multacida-0.141.27e-091.07e-08
familyBacteroidaceae0.1391.47e-091.2e-08
genusBacteroides0.1391.47e-091.2e-08
classGammaproteobacteria-0.1363.21e-092.57e-08
familySutterellaceae-0.1328.86e-096.97e-08
classMethanobacteria-0.1311.23e-089.22e-08
orderMethanobacteriales-0.1311.23e-089.22e-08
familyMethanobacteriaceae-0.1311.23e-089.22e-08
genusMethanobrevibacter-0.1311.27e-089.37e-08
speciesMethanobrevibacter_smithii-0.131.55e-081.13e-07
speciesLactobacillus_mucosae-0.131.8e-081.29e-07
classBetaproteobacteria-0.1273.26e-082.3e-07
speciesRoseburia_hominis0.1273.61e-082.51e-07
genusCatenibacterium-0.1273.82e-082.58e-07
speciesCatenibacterium_mitsuokai-0.1273.82e-082.58e-07
phylumEuryarchaeota-0.1274.02e-082.67e-07
speciesBacteroides_coprocola-0.1264.22e-082.77e-07
speciesBacteroides_thetaiotaomicron0.1256.19e-084e-07
speciesLachnospiraceae_bacterium_1_1_57FAA0.1247.1e-084.53e-07
genusPhascolarctobacterium-0.1231.01e-076.27e-07
speciesPhascolarctobacterium_succinatutens-0.1231.01e-076.27e-07
genusMegamonas-0.1231.05e-076.41e-07
speciesMegamonas_unclassified-0.1231.06e-076.41e-07
orderBurkholderiales-0.1211.44e-078.6e-07
speciesHoldemania_unclassified0.122.02e-071.19e-06
speciesAnaerotruncus_colihominis0.122.04e-071.19e-06
speciesMegamonas_hypermegale-0.1192.19e-071.26e-06
speciesBlautia_hydrogenotrophica0.1192.32e-071.32e-06
speciesRuminococcus_lactaris0.1183.1e-071.74e-06
speciesMegasphaera_unclassified-0.1165.23e-072.9e-06
genusSutterellaceae_unclassified-0.1155.99e-073.29e-06
familyVeillonellaceae-0.1156.23e-073.38e-06
speciesLactobacillus_ruminis-0.1147.1e-073.81e-06
speciesStreptococcus_thermophilus0.1147.28e-073.86e-06
speciesDesulfovibrio_piger-0.1147.47e-073.92e-06
speciesStreptococcus_australis0.1148.05e-074.17e-06
orderEnterobacteriales-0.1148.22e-074.17e-06
familyEnterobacteriaceae-0.1148.22e-074.17e-06
speciesCoprococcus_comes0.1139.57e-074.81e-06
speciesBlautia_producta0.1121.1e-065.47e-06
speciesLactobacillus_salivarius-0.1121.29e-066.34e-06
speciesMegamonas_funiformis-0.112.06e-061e-05
speciesEubacterium_sp_3_1_310.1092.08e-061e-05
speciesClostridium_leptum0.1073.53e-061.68e-05
speciesCoprococcus_catus0.1064.67e-062.2e-05
speciesLachnospiraceae_bacterium_3_1_46FAA0.1045.97e-062.79e-05
genusErysipelotrichaceae_noname-0.1047.04e-063.26e-05
speciesSutterella_wadsworthensis-0.1037.7e-063.53e-05
genusEscherichia-0.1038.28e-063.76e-05
genusFlavonifractor0.1028.95e-063.99e-05
speciesFlavonifractor_plautii0.1028.95e-063.99e-05
speciesClostridium_bolteae0.1021.08e-054.76e-05
speciesMethanobrevibacter_unclassified-0.1011.25e-055.46e-05
genusSutterella-0.1011.31e-055.67e-05
speciesKlebsiella_pneumoniae-0.11.35e-055.79e-05
speciesPrevotella_buccae-0.0991.72e-057.31e-05
speciesEscherichia_coli-0.0982.26e-059.52e-05
genusPeptostreptococcaceae_noname0.0972.42e-050.000101
orderCoriobacteriales0.0972.62e-050.000108
familyCoriobacteriaceae0.0972.62e-050.000108
speciesClostridium_bartlettii0.0972.77e-050.000112
genusPantoea-0.0972.8e-050.000112
speciesPantoea_unclassified-0.0972.8e-050.000112
genusAcidaminococcus-0.0962.94e-050.000116
genusStreptococcus0.0962.94e-050.000116
speciesClostridium_symbiosum0.0944.92e-050.000192
speciesOlsenella_unclassified-0.0945.1e-050.000197
speciesRoseburia_unclassified-0.0935.84e-050.000224
genusDesulfovibrio-0.0936.11e-050.000233
speciesDorea_longicatena0.0926.55e-050.000247
familyStreptococcaceae0.0917.55e-050.000283
speciesMegamonas_rupellensis-0.0918.47e-050.000315
speciesStreptococcus_salivarius0.0918.77e-050.000323
speciesClostridiales_bacterium_1_7_47FAA0.099.23e-050.000338
speciesAcidaminococcus_fermentans-0.090.0001050.000381
genusOxalobacter-0.0890.0001120.0004
speciesOxalobacter_formigenes-0.0890.0001120.0004
speciesMegasphaera_elsdenii-0.0890.0001240.00044
familyOxalobacteraceae-0.0880.0001480.000521
genusCoprococcus0.0870.0001640.000573
genusFusobacterium-0.0860.0001870.000649
genusOlsenella-0.0850.0002380.000814
speciesBacteroides_faecis-0.0850.0002380.000814
phylumFusobacteria-0.0840.0002550.000854
classFusobacteriia-0.0840.0002550.000854
orderFusobacteriales-0.0840.0002550.000854
speciesClostridium_hathewayi0.0840.0002690.000894
speciesDorea_unclassified-0.0840.0002770.000914
speciesCoprobacillus_unclassified0.0840.0002910.000954
familyPeptostreptococcaceae0.0830.0003370.0011
speciesHoldemania_sp_AP20.0820.0003620.00117
familyFusobacteriaceae-0.0820.0003820.00123
familyClostridiales_noname0.0820.0004020.00128
speciesBifidobacterium_longum0.0820.0004070.00129
speciesBacteroides_cellulosilyticus0.0810.000440.00138
speciesLachnospiraceae_bacterium_6_1_63FAA0.0810.0004920.00154
genusKlebsiella-0.080.0005510.0017
familyOscillospiraceae0.080.0005550.0017
genusOscillibacter0.080.0005550.0017
orderAeromonadales-0.0790.0005910.0018
speciesDialister_invisus0.0790.0006220.00188
speciesErysipelotrichaceae_bacterium_21_30.0770.0008730.00262
speciesErysipelotrichaceae_bacterium_6_1_450.0770.000920.00275
speciesRuminococcus_champanellensis-0.0760.0009490.00282
speciesBacteroides_ovatus0.0760.001050.0031
speciesMegasphaera_micronuciformis-0.0760.001080.00317
speciesBacteroides_coprophilus-0.0750.001230.00358
speciesRuminococcus_gnavus0.0750.001250.00362
speciesAcidaminococcus_intestini-0.0740.001270.00366
speciesLactobacillus_crispatus-0.0740.001350.00384
speciesFusobacterium_nucleatum-0.0740.001350.00384
speciesStreptococcus_sanguinis0.0740.001380.0039
speciesAlistipes_senegalensis-0.0730.001480.00416
speciesAggregatibacter_segnis-0.0730.001650.00458
classEpsilonproteobacteria-0.0730.001660.00458
orderCampylobacterales-0.0730.001660.00458
speciesOscillibacter_unclassified0.0730.001690.00464
genusClostridiales_noname0.0720.001880.00513
speciesEubacterium_eligens0.0710.002050.00556
speciesStreptococcus_parasanguinis0.0710.002140.00577
speciesAlistipes_indistinctus-0.0710.002220.00595
speciesEggerthella_sp_1_3_56FAA0.070.002430.00648
genusAggregatibacter-0.0680.003150.00835
speciesBifidobacterium_breve-0.0680.00320.00844
speciesBacteroides_stercoris-0.0680.003430.00899
speciesEscherichia_unclassified-0.0670.003690.00962
speciesLachnospiraceae_bacterium_7_1_58FAA0.0670.003720.00965
speciesEnterobacter_cloacae-0.0660.004150.0107
genusClostridium0.0660.00440.0113
genusEnterobacter-0.0660.00450.0115
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0650.00480.0122
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0640.005610.0142
speciesParaprevotella_unclassified-0.0640.005850.0147
speciesParaprevotella_xylaniphila-0.0640.005930.0148
familyClostridiaceae0.0630.006550.0163
genusParaprevotella-0.0630.006580.0163
orderActinomycetales0.0620.007520.0185
phylumActinobacteria0.0610.007980.0194
classActinobacteria0.0610.007980.0194
speciesClostridium_sp_KLE_17550.0610.008080.0196
speciesRuminococcus_callidus0.0610.008460.0204
genusMethanosphaera-0.0610.008550.0204
speciesMethanosphaera_stadtmanae-0.0610.008550.0204
orderBacillales0.0610.008810.0209
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speciesSubdoligranulum_unclassified0.0490.03420.0674
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speciesTuricibacter_sanguinis0.0490.03440.0674
genusParabacteroides-0.0490.03520.0687
phylumVerrucomicrobia0.0480.03790.0721
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genusAkkermansia0.0480.03790.0721
speciesAkkermansia_muciniphila0.0480.03790.0721
speciesEubacterium_dolichum0.0480.03810.0722
speciesClostridium_ramosum0.0480.03830.0723
genusLeuconostoc0.0480.03910.0735
genusClostridiaceae_noname0.0470.04120.0769
speciesClostridiaceae_bacterium_JC1180.0470.04120.0769
familyLactobacillaceae-0.0470.04280.0795
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speciesFusobacterium_ulcerans-0.0460.04440.0819
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speciesBifidobacterium_angulatum-0.0460.04530.0819
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speciesBacteroides_salanitronis-0.0450.050.0897
speciesDialister_succinatiphilus-0.0450.05160.0923
orderLactobacillales0.0450.05320.0946
speciesBacteroides_finegoldii-0.0450.05330.0946
speciesOscillibacter_sp_KLE_17450.0440.05530.0978
speciesLactobacillus_gasseri-0.0440.05680.1
genusAcidaminococcaceae_unclassified-0.0440.05910.104
orderPasteurellales-0.0430.06120.107
familyPasteurellaceae-0.0430.06120.107
speciesAcidaminococcus_unclassified-0.0430.06330.11
speciesParabacteroides_sp_D13-0.0430.06370.11
genusRothia0.0430.06610.114
speciesCoprococcus_sp_ART55_1-0.0420.06930.119
familyMicrococcaceae0.0420.06980.119
speciesRothia_mucilaginosa0.0420.07060.12
speciesBacteroides_nordii0.0420.0710.121
speciesErysipelotrichaceae_bacterium_2_2_44A0.0420.07270.123
speciesClostridium_perfringens-0.0410.07510.126
genusHaemophilus-0.0410.07520.126
genusSlackia-0.0410.07550.126
genusPeptostreptococcus-0.0410.07770.13
genusPorphyromonas-0.0410.07880.131
genusButyrivibrio0.0410.07920.131
speciesStreptococcus_anginosus-0.040.08370.138
speciesLactococcus_lactis0.040.08410.138
genusBilophila0.040.08490.139
speciesLactobacillus_acidophilus0.040.08650.141
speciesLactobacillus_vaginalis-0.0390.08810.143
speciesBilophila_unclassified0.0390.08950.145
speciesBacteroides_eggerthii-0.0390.09010.145
speciesHaemophilus_parainfluenzae-0.0390.09010.145
genusBifidobacterium0.0380.09810.157
speciesParabacteroides_goldsteinii-0.0380.09950.158
speciesBacteroides_intestinalis0.0380.09960.158
orderBifidobacteriales0.0380.10.158
familyBifidobacteriaceae0.0380.10.158
speciesLactococcus_phage_P6800.0370.1050.166
speciesCollinsella_aerofaciens-0.0370.1120.176
genusBurkholderiales_noname0.0370.1140.178
speciesBurkholderiales_bacterium_1_1_470.0370.1140.178
speciesAlistipes_onderdonkii0.0370.1140.178
speciesParabacteroides_unclassified-0.0360.1150.179
genusPropionibacterium0.0360.1160.18
familyBurkholderiales_noname0.0360.120.185
speciesPeptostreptococcaceae_noname_unclassified0.0360.1210.186
speciesBacteroides_xylanisolvens0.0360.1240.19
genusCollinsella-0.0350.1270.194
speciesEubacterium_cylindroides-0.0350.1290.196
speciesPropionibacterium_freudenreichii0.0350.1340.203
speciesPorphyromonas_asaccharolytica-0.0350.1340.203
speciesEubacterium_limosum-0.0350.1350.204
familyActinomycetaceae0.0340.140.21
familyPorphyromonadaceae-0.0340.1440.216
genusAnaerotruncus0.0340.1470.22
speciesBifidobacterium_adolescentis-0.0330.1570.234
genusStaphylococcus0.0320.1610.238
speciesPorphyromonas_uenonis-0.0320.1610.238
genusSolobacterium0.0320.1680.247
speciesSolobacterium_moorei0.0320.1680.247
genusLactococcus0.0320.1710.251
speciesBacteroides_massiliensis-0.0310.1740.254
speciesCoprococcus_eutactus-0.0310.1750.255
speciesVeillonella_dispar-0.0310.180.261
speciesLactobacillus_amylovorus-0.0310.1830.265
speciesParabacteroides_distasonis-0.0310.1860.268
familyRikenellaceae0.0310.1870.268
genusAlistipes0.0310.1870.268
speciesStreptococcus_lutetiensis-0.030.1890.27
speciesSubdoligranulum_sp_4_3_54A2FAA0.030.1890.27
genusActinomyces0.030.1960.279
speciesParabacteroides_sp_20_3-0.0290.2030.288
speciesEnterobacter_aerogenes-0.0290.2070.293
speciesLactobacillus_delbrueckii0.0290.2150.303
familyStaphylococcaceae0.0290.2170.305
speciesFusobacterium_varium-0.0280.2220.311
speciesButyrivibrio_crossotus0.0280.2260.316
speciesLachnospiraceae_bacterium_2_1_46FAA0.0280.2310.322
speciesLachnospiraceae_bacterium_2_1_58FAA0.0280.2320.322
speciesCollinsella_tanakaei-0.0270.2460.341
speciesOdoribacter_laneus0.0270.2480.342
speciesBifidobacterium_dentium-0.0260.2580.355
speciesSlackia_piriformis-0.0260.2620.359
speciesBacteroides_fragilis0.0260.2630.36
speciesBacteroides_sp_2_1_220.0250.2720.371
speciesLactobacillus_plantarum0.0250.2750.374
speciesStreptococcus_mitis_oralis_pneumoniae0.0250.2830.383
genusButyricicoccus0.0250.2840.383
speciesButyricicoccus_pullicaecorum0.0250.2840.383
speciesEnterococcus_faecalis-0.0250.2870.386
speciesLeuconostoc_lactis0.0240.2920.392
speciesStreptococcus_vestibularis0.0240.2960.396
speciesDesulfovibrio_desulfuricans-0.0240.2980.397
genusPseudoflavonifractor0.0240.3010.399
speciesPseudoflavonifractor_capillosus0.0240.3010.399
genusProteus-0.0230.3110.411
speciesWeissella_cibaria-0.0230.3170.418
speciesBacteroides_caccae-0.0230.3190.419
genusWeissella-0.0230.3210.421
speciesKlebsiella_sp_MS_92_3-0.0230.3250.425
speciesAlistipes_putredinis0.0230.3260.425
speciesButyrivibrio_unclassified0.0220.3350.436
familyLeuconostocaceae0.0220.3360.436
speciesLactococcus_phage_936_sensu_lato-0.0220.3480.45
speciesBacteroides_vulgatus0.0220.3490.45
speciesLactococcus_garvieae-0.0210.3550.457
speciesCoprobacillus_sp_D6-0.0210.3640.467
speciesLactobacillus_reuteri-0.020.3770.481
speciesWeissella_confusa-0.020.3780.481
speciesLactobacillus_fermentum-0.020.3780.481
genusButyricimonas-0.020.3810.482
speciesButyricimonas_synergistica-0.020.3810.482
speciesBifidobacterium_animalis0.0190.40.505
familyMyoviridae-0.0190.4050.51
speciesBifidobacterium_pseudocatenulatum0.0190.4060.51
speciesCitrobacter_freundii-0.0180.4280.534
speciesAlistipes_sp_AP110.0180.4280.534
speciesAlistipes_shahii-0.0180.4310.537
speciesBacteroides_pectinophilus-0.0180.4330.538
speciesStreptococcus_gordonii-0.0170.4580.566
speciesOscillibacter_sp_KLE_17280.0170.4590.566
genusParasutterella0.0170.4620.566
speciesLactobacillus_rhamnosus0.0170.4620.566
speciesParasutterella_excrementihominis0.0170.4620.566
speciesProteus_mirabilis-0.0170.4750.581
speciesBacteroides_barnesiae-0.0160.5020.61
speciesAnaerostipes_unclassified-0.0160.5020.61
genusCoriobacteriaceae_noname0.0150.5030.61
speciesKlebsiella_oxytoca-0.0150.5070.613
speciesVeillonella_atypica-0.0150.5080.613
familyBacteroidales_noname0.0150.5180.621
genusBacteroidales_noname0.0150.5180.621
speciesBacteroidales_bacterium_ph80.0150.5180.621
genusPeptoniphilus0.0140.5570.666
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0130.5610.669
genusSiphoviridae_noname0.0130.5680.675
genusCitrobacter-0.0130.5880.692
phylumSynergistetes-0.0130.5890.692
classSynergistia-0.0130.5890.692
orderSynergistales-0.0130.5890.692
familySynergistaceae-0.0130.5890.692
genusOdoribacter-0.0120.5940.696
genusEnterococcus-0.0120.6120.713
speciesBacteroides_sp_4_3_47FAA-0.0120.6130.713
speciesAnaerotruncus_unclassified0.0120.6150.713
speciesVeillonella_parvula0.0120.6150.713
speciesCoriobacteriaceae_bacterium_phI0.0120.6160.713
speciesOdoribacter_splanchnicus-0.0120.6190.714
speciesParvimonas_unclassified-0.0110.620.714
genusParvimonas-0.0110.6230.715
speciesBacteroides_sp_3_1_190.0110.6440.738
speciesBacteroides_salyersiae-0.0110.6460.738
familyEnterococcaceae-0.010.6550.747
speciesAlistipes_sp_HGB50.010.6660.757
speciesPrevotella_bivia0.010.6690.759
speciesLactobacillus_casei_paracasei0.010.6810.771
genusCoprobacter0.0090.6870.772
speciesCoprobacter_fastidiosus0.0090.6870.772
genusRuminococcaceae_noname0.0090.6890.772
speciesRuminococcaceae_bacterium_D160.0090.6890.772
speciesAlistipes_unclassified-0.0090.690.772
speciesBacteroides_clarus0.0090.6960.777
speciesVeillonella_unclassified-0.0090.70.779
familyClostridiales_Family_XI_Incertae_Sedis0.0090.7040.782
genusC2likevirus-0.0080.7170.793
speciesOdoribacter_unclassified-0.0080.7170.793
speciesGemella_morbillorum0.0080.720.794
classDeltaproteobacteria0.0080.7280.794
orderDesulfovibrionales0.0080.7280.794
familyDesulfovibrionaceae0.0080.7280.794
speciesLactococcus_phage_bIL67-0.0080.730.794
speciesBifidobacterium_catenulatum0.0080.730.794
speciesC2likevirus_unclassified-0.0080.730.794
speciesBacteroides_sp_1_1_6-0.0070.7460.809
speciesEnterobacteria_phage_HK5440.0070.7570.82
speciesLactococcus_phage_phi7-0.0070.7640.825
speciesBacteroides_fluxus0.0070.7660.825
speciesParabacteroides_johnsonii-0.0070.770.828
speciesCitrobacter_unclassified-0.0060.7790.836
orderCaudovirales-0.0060.7840.839
genusLambdalikevirus-0.0060.7940.848
speciesClostridium_sp_L2_50-0.0060.80.852
genusMyoviridae_noname0.0060.8040.855
speciesRuminococcus_sp_JC3040.0060.8080.857
familyViruses_noname-0.0050.8140.858
genusViruses_noname-0.0050.8140.858
speciesStreptococcus_mutans-0.0050.8140.858
genusPyramidobacter-0.0050.8190.859
speciesPyramidobacter_piscolens-0.0050.8190.859
speciesSutterella_parvirubra0.0050.8230.861
phylumViruses_noname-0.0040.8460.881
classViruses_noname-0.0040.8460.881
speciesCollinsella_unclassified-0.0040.870.904
orderViruses_noname-0.0040.8780.909
speciesEnterococcus_faecium0.0040.8780.909
speciesLactococcus_phage_jm2-0.0030.8840.913
speciesClostridium_nexile-0.0030.8910.918
familySiphoviridae-0.0030.9090.935
speciesEubacterium_siraeum0.0020.9260.95
speciesAlistipes_finegoldii-0.0020.9280.95
speciesStreptococcus_phage_Sfi21-0.0020.9320.952
speciesKlebsiella_phage_KP36-0.0020.9430.961
familyPodoviridae0.0020.9450.961
speciesKlebsiella_unclassified0.0020.9480.962
genusVeillonella0.0010.950.962
speciesPeptostreptococcus_anaerobius-0.0010.9540.964
genusTunalikevirus0.0010.9740.982
speciesClostridium_sp_ATCC_BAA_4420.0010.9790.985
genusBarnesiella0.00.9890.991
speciesBarnesiella_intestinihominis0.00.9890.991
speciesHaemophilus_sputorum0.00.9920.992
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.1180109893480.1413402505330.00216082461839841528.2677
Colorectal cancerAustria64350.139462596040.1932479966940.004889091047583231.09284
Type II diabetesChina1831850.1304688868810.1454130043080.0594919616441752924.8819
Ulcerative colitisSpain78660.129550425110.1427671990490.126831614621808926.684
Type II diabetesSweden53920.1984961432620.1787473144540.179640674467632221.4087
Rheumatoid arthritisChina127980.1605758922810.1543411401220.5199660254391808560.3095
Type II diabetesDenmark752770.1389505754650.1388961968960.5385856014292134569.9676
ObesityDenmark1691230.1372889671880.1399262568590.7398616079592486981.7763
Crohns diseaseSpain17660.1403051459220.1427671990490.9325568689492920097.0906
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382