MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 09:52:13 PST
Job id & description: 2377, guanosine4
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0086_GL01171373248839CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0200_GL02004873250897CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0006_GL00368153247798CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0189_GL01120803250593CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0193_GL00945263250714CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0239_GL01156953251423CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0330_GL00167323252818CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0357_GL01034613253241CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
O2.UC2-1_GL00256173256075CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
O2.UC7-0_GL00232473289247CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0188_GL00298973250476CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC2-1_GL00224703256074CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
O2.UC18-0_GL00153393288207CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
V1.CD15-3_GL01035893273282CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0050_GL00389823248459CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0385_GL01421133253954CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC15-1_GL01163323255920CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC30-1_GL00761353256316CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.FI05_GL00293093258072CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC48-0_GL00997163256758CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD54-0_GL00211623273883CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0012_GL01393173248037CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0217_GL00653583251107CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0327_GL00651813252743CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC19-1_GL00132093256004CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD3-0-PN_GL00161733257462CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC39-4_GL00527793275326CompleteK03783COG0005ProteobacteriaProvidencia100.0100.0100.0
MH0013_GL00211653248085CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0188_GL01441623250520CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0200_GL00429413250869CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0277_GL00473323252114CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
V1.CD3-0-PN_GL01255273273563CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
V1.FI17_GL00909103258360CompleteK03783COG0005unknownunknown100.0100.0100.0
BGI-15A_GL00417573260516CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0277_GL00240033268281CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0419_GL00530993286983CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
NOM026_GL00400693276546CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0277_GL00281873268285CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
MH0277_GL00433253268308CompleteK03783COG0005FirmicutesEnterococcus100.0100.0100.0
MH0431_GL01866363287251CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0447_GL00613843255319CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC40-0_GL00800793259234CompleteK03783COG0005unknownunknown100.0100.0100.0
195102.CPE03983279505CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
MH0277_GL00497753268314CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC24-1_GL01253343272219CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-112A_GL00184533261171CompleteK03783COG0005unknownunknown100.0100.0100.0
158458797-stool1_revised3278301CompleteK03783COG0005unknownunknown100.0100.0100.0
596329.HMPREF0631_18153279835CompleteK03783COG0005FirmicutesPeptostreptococcus100.0100.0100.0
MH0003_GL00193253247731CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0004_GL00168883280029CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0016_GL00346053280383CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0047_GL00236773248440CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0147_GL00631493282191CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0193_GL00693453266878CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0277_GL00527113268317CompleteK03783COG0005FirmicutesEnterococcus100.0100.0100.0
MH0298_GL00881623268509CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0336_GL00193293252882CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0336_GL01196193285204CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0441_GL00357673287496CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-33A_GL00365533261578Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
V1.CD3-0-PT_GL00441763273580CompleteK03783COG0005unknownunknown100.0100.0100.0
158337416-stool1_revised3278230CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
457396.CSBG_030893279692CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
765701615-stool1_revised3263333CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0140_GL00475073281993CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0153_GL00572093266180CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0189_GL00100243250547CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC1-2_GL00105393288100CompleteK03783COG0005BacteroidetesPorphyromonas100.0100.0100.0
V1.CD6-0-PN_GL01069103273951CompleteK03783COG0005unknownunknown100.0100.0100.0
DOF012_GL00388523276091CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0003_GL00888343280009CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0006_GL01309893264013CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0143_GL00717683282088CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0158_GL00120223266233CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0277_GL00305703268288CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0287_GL00830963268430CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0361_GL00371673269483CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC44-2_GL00184523288850CompleteK03783COG0005BacteroidetesPorphyromonas100.0100.0100.0
O2.UC50-2_GL02276723272941CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC35-0_GL00339293291331CompleteK03783COG0005BacteroidetesPorphyromonas100.0100.0100.0
MH0012_GL01620583248047CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0198_GL00150583267003CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0222_GL01010353283380CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0271_GL01425433284223CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0336_GL00379763252887CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0083_GL00410873281062CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0145_GL01024143282162CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0367_GL01575863285784CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0386_GL00669563286271CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0041_GL00592683264528CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0077_GL00727673281012CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0124_GL01027273249479CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0415_GL02409683270666CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0431_GL00385773287229CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0012_GL00492363280262CompleteK03783COG0005unknownunknown100.0100.0100.0
SZEY-104A_GL00650073278147CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.FI27_GL01526633290765Lack 5'-endK03783COG0005FirmicutesStreptococcus100.0100.0100.0
MH0243_GL00540693283683CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC31-0_GL00963963259076CompleteK03783COG1683;COG0005ActinobacteriaCollinsella100.0100.0100.0
O2.UC24-0_GL00304053288382CompleteK03783COG0005unknownunknown100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
genusSubdoligranulum0.4861.36e-1116.42e-109
speciesSubdoligranulum_unclassified0.4854.49e-1111.06e-108
classClostridia0.4621.55e-991.84e-97
orderClostridiales0.4621.56e-991.84e-97
familyRuminococcaceae0.456.65e-946.28e-92
speciesCoprococcus_catus0.4134.39e-783.45e-76
genusCoprococcus0.4135.68e-783.83e-76
speciesRuminococcus_obeum0.4064.48e-752.64e-73
phylumBacteroidetes-0.4029.79e-744.21e-72
classBacteroidia-0.4029.8e-744.21e-72
orderBacteroidales-0.4029.8e-744.21e-72
phylumFirmicutes0.4021.35e-735.31e-72
speciesEubacterium_siraeum0.3991.6e-725.81e-71
genusDorea0.3853.23e-671.09e-65
speciesMethanobrevibacter_smithii0.3811.17e-653.68e-64
speciesDorea_longicatena0.3811.61e-654.75e-64
classMethanobacteria0.3796.52e-651.62e-63
orderMethanobacteriales0.3796.52e-651.62e-63
familyMethanobacteriaceae0.3796.52e-651.62e-63
genusMethanobrevibacter0.3772.37e-645.59e-63
phylumEuryarchaeota0.3736.35e-631.43e-61
speciesEubacterium_hallii0.3737.93e-631.7e-61
speciesAnaerotruncus_unclassified0.3611.18e-582.42e-57
familyLachnospiraceae0.3461.22e-532.4e-52
familyBacteroidaceae-0.3439.11e-531.65e-51
genusBacteroides-0.3439.11e-531.65e-51
speciesEubacterium_ramulus0.3421.89e-523.3e-51
speciesCoprococcus_comes0.3413.75e-526.32e-51
orderCoriobacteriales0.3384.25e-516.69e-50
familyCoriobacteriaceae0.3384.25e-516.69e-50
genusRuminococcus0.3221.68e-462.56e-45
speciesAlistipes_senegalensis0.3191.86e-452.74e-44
speciesDorea_formicigenerans0.3138.27e-441.18e-42
phylumVerrucomicrobia0.3121.96e-432.37e-42
classVerrucomicrobiae0.3121.96e-432.37e-42
orderVerrucomicrobiales0.3121.96e-432.37e-42
familyVerrucomicrobiaceae0.3121.96e-432.37e-42
genusAkkermansia0.3121.96e-432.37e-42
speciesAkkermansia_muciniphila0.3121.96e-432.37e-42
speciesRuminococcus_gnavus-0.3073.91e-424.61e-41
genusAnaerotruncus0.3067.93e-429.13e-41
genusAdlercreutzia0.33.42e-403.75e-39
speciesAdlercreutzia_equolifaciens0.33.42e-403.75e-39
genusPseudoflavonifractor0.33.8e-403.99e-39
speciesPseudoflavonifractor_capillosus0.33.8e-403.99e-39
speciesCollinsella_aerofaciens0.2971.73e-391.78e-38
genusButyrivibrio0.2955.71e-395.73e-38
familyBacteroidales_noname0.2862.07e-361.95e-35
genusBacteroidales_noname0.2862.07e-361.95e-35
speciesBacteroidales_bacterium_ph80.2862.07e-361.95e-35
genusCollinsella0.2791.02e-349.44e-34
speciesClostridium_leptum0.2772.76e-342.51e-33
speciesBifidobacterium_adolescentis0.2692.04e-321.82e-31
speciesRoseburia_hominis0.2643.84e-313.36e-30
phylumActinobacteria0.2611.32e-301.11e-29
classActinobacteria0.2611.32e-301.11e-29
familyOxalobacteraceae0.2611.9e-301.57e-29
speciesRuminococcus_sp_5_1_39BFAA0.262.93e-302.38e-29
genusOxalobacter0.2595.29e-304.16e-29
speciesOxalobacter_formigenes0.2595.29e-304.16e-29
familyFusobacteriaceae-0.2588.87e-306.86e-29
speciesAnaerostipes_hadrus0.2554.01e-293.03e-28
phylumFusobacteria-0.2554.17e-293.03e-28
classFusobacteriia-0.2554.17e-293.03e-28
orderFusobacteriales-0.2554.17e-293.03e-28
genusFusobacterium-0.2545.78e-294.13e-28
speciesMethanobrevibacter_unclassified0.2546.12e-294.31e-28
speciesStreptococcus_thermophilus0.2548.22e-295.71e-28
classErysipelotrichia0.2512.79e-281.85e-27
orderErysipelotrichales0.2512.79e-281.85e-27
familyErysipelotrichaceae0.2512.79e-281.85e-27
speciesLachnospiraceae_bacterium_3_1_46FAA0.254.12e-282.7e-27
familyEubacteriaceae0.254.31e-282.79e-27
genusEubacterium0.255.23e-283.34e-27
genusBarnesiella0.2413.57e-262.22e-25
speciesBarnesiella_intestinihominis0.2413.57e-262.22e-25
speciesCoprococcus_sp_ART55_10.246.44e-263.95e-25
speciesLachnospiraceae_bacterium_7_1_58FAA0.2381.95e-251.18e-24
speciesMitsuokella_unclassified0.2363.9e-252.33e-24
speciesButyrivibrio_crossotus0.2356.86e-254.05e-24
speciesRuminococcus_lactaris0.2341.15e-246.7e-24
genusMitsuokella0.2322.73e-241.57e-23
speciesRuminococcus_bromii0.2314.07e-242.31e-23
speciesEubacterium_ventriosum0.2315.41e-243.04e-23
speciesOlsenella_unclassified0.235.75e-243.19e-23
speciesErysipelotrichaceae_bacterium_21_30.2273.22e-231.77e-22
speciesBacteroides_ovatus-0.2241.03e-225.59e-22
genusGordonibacter0.2231.63e-228.64e-22
speciesGordonibacter_pamelaeae0.2231.63e-228.64e-22
speciesClostridium_nexile-0.2213.37e-221.77e-21
genusErysipelotrichaceae_noname0.2214.13e-222.14e-21
genusOlsenella0.225.79e-222.97e-21
genusLachnospiraceae_noname0.2131.41e-207.16e-20
genusAnaerostipes0.2081.1e-195.52e-19
speciesAlistipes_shahii0.2062.27e-191.13e-18
speciesClostridium_bolteae-0.2062.46e-191.21e-18
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.2046.03e-192.93e-18
speciesBacteroides_thetaiotaomicron-0.1951.74e-178.38e-17
speciesClostridium_sp_L2_500.1942.56e-171.22e-16
speciesRuminococcus_torques0.1942.83e-171.34e-16
genusDesulfovibrio0.1933.38e-171.58e-16
speciesFusobacterium_varium-0.1924.98e-172.3e-16
speciesEubacterium_biforme0.1891.78e-168.16e-16
speciesCoprococcus_eutactus0.1882.6e-161.18e-15
orderBifidobacteriales0.1857.18e-163.2e-15
familyBifidobacteriaceae0.1857.18e-163.2e-15
genusBifidobacterium0.1857.36e-163.25e-15
speciesMegamonas_unclassified-0.1849.78e-164.27e-15
genusMegamonas-0.1841.02e-154.42e-15
orderActinomycetales0.1812.71e-151.16e-14
speciesBacteroides_stercoris-0.1812.95e-151.25e-14
speciesFusobacterium_mortiferum-0.1813.37e-151.42e-14
speciesBacteroides_vulgatus-0.1795.81e-152.43e-14
speciesFusobacterium_ulcerans-0.1796.3e-152.61e-14
genusFlavonifractor-0.1771.16e-144.72e-14
speciesFlavonifractor_plautii-0.1771.16e-144.72e-14
speciesBacteroides_fragilis-0.1752.87e-141.16e-13
genusCoprobacter0.1726.41e-142.54e-13
speciesCoprobacter_fastidiosus0.1726.41e-142.54e-13
speciesBifidobacterium_animalis0.1719.08e-143.57e-13
speciesLachnospiraceae_bacterium_5_1_63FAA0.1711.01e-133.94e-13
genusMegasphaera-0.1691.84e-137.12e-13
speciesAlistipes_indistinctus0.1692.01e-137.71e-13
speciesClostridium_symbiosum-0.1692.18e-138.3e-13
genusRuminococcaceae_noname0.1682.9e-131.09e-12
speciesRuminococcaceae_bacterium_D160.1682.9e-131.09e-12
speciesDesulfovibrio_desulfuricans0.1649.13e-133.39e-12
familyActinomycetaceae0.1641.04e-123.83e-12
speciesRuminococcus_champanellensis0.1631.24e-124.54e-12
speciesBifidobacterium_longum0.1631.33e-124.83e-12
genusActinomyces0.1612.67e-129.62e-12
speciesKlebsiella_pneumoniae-0.163.01e-121.08e-11
genusBlautia0.1594.07e-121.44e-11
speciesEubacterium_rectale0.1594.11e-121.45e-11
genusKlebsiella-0.1594.53e-121.58e-11
speciesAlistipes_finegoldii0.1595.08e-121.76e-11
genusCatenibacterium0.1551.38e-114.72e-11
speciesCatenibacterium_mitsuokai0.1551.38e-114.72e-11
phylumProteobacteria-0.1551.73e-115.87e-11
speciesMegamonas_rupellensis-0.1542.48e-118.36e-11
speciesBacteroides_xylanisolvens-0.1532.54e-118.5e-11
speciesMegasphaera_micronuciformis-0.1532.71e-119.01e-11
speciesHoldemania_filiformis0.156.79e-112.24e-10
speciesLactococcus_lactis0.157.88e-112.58e-10
genusOdoribacter0.1498.51e-112.77e-10
phylumViruses_noname0.1499.33e-113e-10
classViruses_noname0.1499.33e-113e-10
genusHoldemania0.1491.04e-103.32e-10
speciesRuminococcus_callidus0.1491.07e-103.39e-10
familySiphoviridae0.1481.41e-104.44e-10
familyPeptostreptococcaceae0.1471.5e-104.69e-10
speciesClostridiales_bacterium_1_7_47FAA-0.1471.54e-104.78e-10
speciesClostridium_citroniae-0.1452.81e-108.67e-10
genusLactococcus0.1434.88e-101.5e-09
speciesPrevotella_buccae-0.1426.29e-101.92e-09
speciesBacteroides_intestinalis0.141.3e-093.93e-09
genusPeptostreptococcaceae_noname0.1391.56e-094.69e-09
speciesBacteroides_pectinophilus0.1391.78e-095.32e-09
speciesMegamonas_hypermegale-0.1382.13e-096.32e-09
speciesPropionibacterium_freudenreichii0.1372.5e-097.38e-09
familyVeillonellaceae-0.1372.81e-098.24e-09
speciesButyrivibrio_unclassified0.1363.54e-091.03e-08
speciesClostridium_clostridioforme-0.1363.8e-091.1e-08
genusFaecalibacterium0.1355.16e-091.48e-08
speciesFaecalibacterium_prausnitzii0.1355.16e-091.48e-08
genusMethanosphaera0.1346.22e-091.76e-08
speciesMethanosphaera_stadtmanae0.1346.22e-091.76e-08
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.1329.28e-092.61e-08
speciesLactobacillus_delbrueckii0.1311.17e-083.27e-08
genusPropionibacterium0.1311.37e-083.8e-08
speciesOdoribacter_laneus0.131.9e-085.24e-08
genusParabacteroides-0.1283.06e-088.4e-08
speciesCampylobacter_concisus-0.1273.6e-089.82e-08
speciesLachnospiraceae_bacterium_6_1_63FAA-0.1273.79e-081.03e-07
classGammaproteobacteria-0.1264.3e-081.16e-07
genusHaemophilus-0.1265.14e-081.38e-07
speciesHaemophilus_parainfluenzae-0.1255.47e-081.46e-07
speciesPeptostreptococcaceae_noname_unclassified0.1255.76e-081.53e-07
orderCaudovirales0.1246.93e-081.83e-07
speciesBacteroides_plebeius-0.1247.56e-081.98e-07
orderPasteurellales-0.1248e-082.07e-07
familyPasteurellaceae-0.1248e-082.07e-07
speciesEubacterium_eligens0.1238.55e-082.21e-07
speciesMegamonas_funiformis-0.1239.81e-082.51e-07
speciesCoprobacillus_unclassified-0.1239.82e-082.51e-07
speciesBifidobacterium_catenulatum0.1231.04e-072.64e-07
genusButyricimonas0.1221.1e-072.76e-07
speciesButyricimonas_synergistica0.1221.1e-072.76e-07
familyRikenellaceae0.1211.41e-073.5e-07
genusAlistipes0.1211.41e-073.5e-07
speciesOdoribacter_splanchnicus0.1211.43e-073.53e-07
speciesVeillonella_parvula-0.1211.58e-073.88e-07
speciesLactobacillus_salivarius-0.1211.67e-074.08e-07
speciesEnterococcus_faecium0.121.8e-074.38e-07
genusC2likevirus0.1192.2e-075.33e-07
speciesHoldemania_unclassified0.1192.27e-075.47e-07
speciesLactobacillus_mucosae-0.1192.33e-075.58e-07
speciesEubacterium_cylindroides0.1192.48e-075.91e-07
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speciesC2likevirus_unclassified0.1174.19e-079.69e-07
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speciesAlistipes_sp_AP110.1156.16e-071.4e-06
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familyEnterococcaceae0.1148.56e-071.91e-06
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speciesRuminococcus_sp_JC3040.1073.42e-067.21e-06
genusPhascolarctobacterium0.1064.38e-069.15e-06
speciesPhascolarctobacterium_succinatutens0.1064.38e-069.15e-06
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speciesVeillonella_atypica-0.1021.08e-052.17e-05
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speciesStreptococcus_pasteurianus-0.11.4e-052.79e-05
speciesSubdoligranulum_sp_4_3_54A2FAA0.11.46e-052.9e-05
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familyEnterobacteriaceae-0.11.5e-052.95e-05
familySutterellaceae-0.0991.74e-053.41e-05
speciesPrevotella_stercorea-0.0991.78e-053.47e-05
speciesFusobacterium_nucleatum-0.0954.1e-057.96e-05
speciesStreptococcus_parasanguinis0.0944.74e-059.17e-05
speciesBifidobacterium_pseudocatenulatum-0.0935.25e-050.000101
genusParaprevotella0.0926.38e-050.000122
speciesParaprevotella_unclassified0.0917.43e-050.000142
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0890.0001220.000232
speciesAlistipes_putredinis0.0880.0001350.000256
genusLeuconostoc0.0880.0001440.000272
speciesLactobacillus_rhamnosus0.0880.0001460.000275
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genusCampylobacter-0.0860.0001880.000349
speciesStreptococcus_sanguinis0.0860.000190.000352
genusRothia0.0860.0002010.000371
genusSolobacterium0.0860.0002090.000382
speciesSolobacterium_moorei0.0860.0002090.000382
familyMicrococcaceae0.0850.0002230.000406
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speciesParaprevotella_xylaniphila0.0840.0002620.000474
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speciesEubacterium_dolichum-0.0830.0003180.00057
speciesBacteroides_cellulosilyticus0.0830.0003190.00057
speciesLachnospiraceae_bacterium_8_1_57FAA0.0830.0003330.000593
speciesRoseburia_unclassified0.0830.0003480.000618
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speciesEscherichia_coli-0.0820.00040.000704
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speciesCollinsella_intestinalis-0.0810.0004580.000801
familyBacillales_noname0.080.0004980.000864
genusGemella0.080.0004980.000864
speciesAggregatibacter_segnis-0.080.0005140.000889
speciesLachnospiraceae_bacterium_1_4_56FAA-0.080.0005390.000928
classEpsilonproteobacteria-0.0790.0006180.00106
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speciesOscillibacter_unclassified0.0770.0008020.00137
speciesRothia_mucilaginosa0.0770.0008520.00145
speciesPrevotella_copri-0.0760.0009360.00158
speciesOdoribacter_unclassified0.0760.0009470.0016
speciesClostridium_hathewayi-0.0760.001010.0017
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speciesDialister_succinatiphilus0.0750.001110.00185
speciesParvimonas_unclassified0.0740.001360.00225
speciesStreptococcus_salivarius0.0740.001360.00225
genusParvimonas0.0740.001370.00226
speciesGemella_morbillorum0.0740.001430.00235
speciesBlautia_hydrogenotrophica0.0730.001570.00257
orderBacillales0.0730.00160.00261
familyClostridiales_Family_XI_Incertae_Sedis0.0730.001690.00275
genusActinobacillus-0.0730.00170.00275
speciesActinobacillus_unclassified-0.0730.00170.00275
speciesStreptococcus_australis0.0720.001950.00314
speciesParabacteroides_unclassified-0.070.002320.00372
familyOscillospiraceae0.0680.003120.00496
genusOscillibacter0.0680.003120.00496
speciesClostridium_ramosum-0.0680.003120.00496
speciesErysipelotrichaceae_bacterium_2_2_44A0.0670.003650.00578
speciesPorphyromonas_asaccharolytica0.0670.003670.00579
speciesLachnospiraceae_bacterium_1_1_57FAA0.0670.00390.00614
speciesBacteroides_eggerthii0.0650.00490.00768
speciesEnterobacter_cloacae-0.0650.004950.00774
genusClostridiales_noname-0.0640.005280.00822
speciesAlistipes_unclassified0.0630.006210.00964
genusEnterobacter-0.0620.007160.0111
speciesRoseburia_intestinalis0.0620.007350.0113
genusDialister0.0620.007590.0117
speciesEggerthella_unclassified-0.0610.008040.0123
speciesAlistipes_sp_HGB50.0590.01010.0154
speciesBifidobacterium_breve-0.0590.01020.0155
speciesParabacteroides_distasonis-0.0590.01070.0162
speciesCitrobacter_freundii-0.0590.01080.0163
speciesClostridium_spiroforme0.0580.01240.0187
familyPrevotellaceae-0.0580.01250.0188
speciesParabacteroides_sp_D130.0570.01330.0199
speciesMitsuokella_multacida0.0570.0140.0209
speciesEnterobacter_aerogenes-0.0560.01470.0219
genusCoriobacteriaceae_noname0.0550.01650.0245
speciesBacteroides_salanitronis0.0550.01780.0263
speciesDorea_unclassified-0.0540.01910.0282
speciesCoriobacteriaceae_bacterium_phI0.0540.01950.0287
speciesKlebsiella_unclassified-0.0530.0210.0306
genusPantoea-0.0530.02110.0306
speciesPantoea_unclassified-0.0530.02110.0306
speciesLactococcus_phage_jm20.0530.02110.0306
speciesBacteroides_sp_3_1_19-0.0530.02210.032
genusEggerthella-0.0520.02390.0345
speciesLactobacillus_crispatus-0.0520.02420.0348
familyAcidaminococcaceae0.0520.02440.035
genusCitrobacter-0.0520.02480.0355
speciesParabacteroides_sp_20_30.0520.02520.0359
speciesLactococcus_phage_bIL670.050.02920.0415
speciesBacteroides_clarus0.050.02930.0415
speciesStreptococcus_gordonii0.050.03010.0425
speciesLactobacillus_ruminis0.050.0320.0451
speciesLactococcus_phage_936_sensu_lato0.0490.03320.0466
speciesCitrobacter_unclassified-0.0490.03350.0469
classDeltaproteobacteria0.0490.03450.0479
orderDesulfovibrionales0.0490.03450.0479
familyDesulfovibrionaceae0.0490.03450.0479
speciesBacteroides_barnesiae0.0490.03530.0489
familyClostridiales_noname-0.0490.03580.0494
speciesLactobacillus_plantarum0.0480.03680.0506
speciesStreptococcus_mutans0.0480.0380.0521
speciesAcidaminococcus_intestini-0.0450.05010.0685
speciesBifidobacterium_angulatum0.0450.05160.0704
familyLactobacillaceae0.0440.0560.0762
speciesLactobacillus_oris-0.0430.06090.0826
genusLactobacillus0.0430.06330.0856
speciesCollinsella_unclassified-0.0430.06420.0866
speciesSutterella_wadsworthensis0.0430.06580.0885
genusClostridiaceae_noname-0.0420.06910.0924
speciesClostridiaceae_bacterium_JC118-0.0420.06910.0924
speciesSutterella_parvirubra-0.0420.07110.0948
speciesOscillibacter_sp_KLE_1728-0.0420.07190.0953
genusPyramidobacter-0.0420.07210.0953
speciesPyramidobacter_piscolens-0.0420.07210.0953
speciesStreptococcus_vestibularis0.0410.0730.0962
genusRoseburia0.0410.07520.0989
speciesWeissella_confusa-0.0410.0790.104
speciesEggerthella_lenta0.040.08040.105
speciesClostridium_asparagiforme-0.040.08130.106
speciesPrevotella_bivia-0.0390.08950.116
speciesBacteroides_massiliensis-0.0390.08970.116
genusPeptostreptococcus0.0380.1020.132
speciesEggerthella_sp_1_3_56FAA0.0380.1020.132
speciesHoldemania_sp_AP2-0.0380.1040.134
speciesStreptococcus_lutetiensis-0.0370.1080.139
speciesCollinsella_tanakaei-0.0370.1090.139
familyLeuconostocaceae0.0370.110.14
speciesBacteroides_finegoldii-0.0370.110.14
speciesBacteroides_dorei0.0370.110.14
genusLambdalikevirus0.0370.1140.144
genusWeissella-0.0360.1220.154
speciesLactococcus_phage_phi70.0350.1250.157
speciesClostridium_perfringens-0.0350.130.163
speciesPeptostreptococcus_stomatis0.0350.1340.168
speciesMegasphaera_elsdenii-0.0340.1360.17
familyMyoviridae-0.0340.1420.177
genusSutterella0.0320.1660.206
speciesRoseburia_inulinivorans-0.0310.1750.217
speciesStreptococcus_infantarius-0.0310.1860.23
speciesKlebsiella_sp_MS_92_3-0.030.1940.239
speciesLactobacillus_vaginalis-0.030.1970.242
genusClostridium-0.0290.2030.249
familyClostridiaceae-0.0290.2080.254
speciesPorphyromonas_uenonis0.0290.2080.254
genusMorganella-0.0280.2180.265
speciesMorganella_morganii-0.0280.2180.265
speciesBacteroides_coprocola-0.0280.2290.277
speciesParabacteroides_johnsonii0.0280.2310.279
speciesParabacteroides_goldsteinii0.0270.240.289
phylumSynergistetes-0.0270.2490.297
classSynergistia-0.0270.2490.297
orderSynergistales-0.0270.2490.297
familySynergistaceae-0.0270.2490.297
speciesLachnospiraceae_bacterium_5_1_57FAA-0.0250.2710.322
speciesLactobacillus_acidophilus0.0250.2720.323
speciesDialister_invisus0.0250.2750.325
speciesStreptococcus_phage_Sfi210.0250.2870.338
speciesBifidobacterium_bifidum0.0250.2870.338
speciesHaemophilus_sputorum-0.0250.2880.338
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0230.3220.376
speciesSlackia_piriformis0.0230.3220.376
speciesBacteroides_nordii-0.0230.3230.376
speciesErysipelotrichaceae_bacterium_3_1_53-0.0220.3430.399
familyViruses_noname0.0220.3530.408
genusViruses_noname0.0220.3530.408
genusAcidaminococcus-0.0210.3660.422
speciesEubacterium_limosum0.020.3780.435
speciesBacteroides_caccae-0.020.3930.451
speciesBlautia_producta-0.020.3950.453
speciesStreptococcus_mitis_oralis_pneumoniae0.0190.4060.464
genusPeptoniphilus0.0190.410.467
speciesBacteroides_sp_1_1_6-0.0190.4170.474
speciesLactobacillus_gasseri-0.0190.4180.474
speciesBacteroides_fluxus0.0190.4220.478
speciesBacteroides_sp_4_3_47FAA-0.0180.430.486
speciesKlebsiella_oxytoca0.0180.4310.486
speciesEscherichia_unclassified-0.0180.4480.503
speciesOscillibacter_sp_KLE_1745-0.0160.4840.543
speciesEnterobacteria_phage_HK544-0.0150.5120.573
genusBurkholderiales_noname-0.0150.5230.582
speciesBurkholderiales_bacterium_1_1_47-0.0150.5230.582
speciesBilophila_unclassified-0.0150.5310.59
speciesBacteroides_uniformis-0.0140.5430.602
speciesParabacteroides_merdae0.0140.5450.602
genusTunalikevirus0.0140.5520.609
genusProteus-0.0140.5560.612
speciesAcidaminococcus_fermentans-0.0140.5580.613
speciesPeptostreptococcus_anaerobius0.0130.5740.628
speciesLactobacillus_fermentum-0.0130.5750.628
speciesProteus_mirabilis-0.0130.5770.629
genusBilophila-0.0120.5950.647
speciesBacteroides_faecis0.0120.6080.66
familyBurkholderiales_noname-0.0120.6140.665
speciesWeissella_cibaria-0.0110.6260.674
speciesLactobacillus_amylovorus-0.0110.6270.674
speciesClostridium_sp_KLE_1755-0.0110.6270.674
genusSlackia0.010.6550.703
speciesLactobacillus_reuteri-0.010.660.706
speciesKlebsiella_phage_KP360.010.6650.71
speciesBifidobacterium_dentium-0.0090.6970.743
speciesEubacterium_sp_3_1_310.0090.7130.758
genusParasutterella-0.0080.720.761
speciesParasutterella_excrementihominis-0.0080.720.761
speciesBacteroides_salyersiae0.0080.7210.761
speciesBacteroides_sp_2_1_22-0.0080.7350.774
orderAeromonadales-0.0080.7450.783
speciesBacteroides_oleiciplenus-0.0070.7580.795
genusMyoviridae_noname-0.0070.770.806
speciesStreptococcus_anginosus-0.0060.7810.816
speciesBacteroides_coprophilus-0.0060.7910.824
genusSutterellaceae_unclassified0.0060.7950.827
speciesBilophila_wadsworthia0.0060.7970.827
speciesAcidaminococcus_unclassified-0.0060.80.828
genusAcidaminococcaceae_unclassified0.0050.8260.852
familyStaphylococcaceae0.0050.8270.852
genusButyricicoccus-0.0040.8510.873
speciesButyricicoccus_pullicaecorum-0.0040.8510.873
speciesCoprobacillus_sp_29_1-0.0040.8710.892
speciesCoprobacillus_sp_D6-0.0040.8750.894
speciesLeuconostoc_lactis0.0020.920.938
speciesLactococcus_garvieae0.0020.9260.942
speciesAnaerotruncus_colihominis0.0020.9390.953
speciesLactobacillus_sanfranciscensis-0.0010.950.962
familySuccinivibrionaceae0.0010.9610.971
familyPodoviridae-0.0010.9770.985
genusSuccinatimonas0.00.9850.989
speciesSuccinatimonas_hippei0.00.9850.989
familyPorphyromonadaceae0.00.990.992
genusStaphylococcus0.00.9940.994
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.01128536264750.01526960428680.000924450695108732424.6028
Crohns diseaseSpain17660.01304730765120.02504437109310.00227123703866533917.7523
ObesityDenmark1691230.02289360598550.03007464307060.0052078787195318205.98468
Rheumatoid arthritisChina127980.02400858599590.01877892015230.037816090449625858.6204
Type II diabetesChina1831850.01814762134430.01321919309180.1630951076271205339.8328
Colorectal cancerAustria64350.03822818432650.04504846580860.5218902096881875463.4524
Type II diabetesDenmark752770.02938160758690.02554616348580.6588101036772399078.6377
Type II diabetesSweden53920.02848531449040.03047488487410.6680756507552063769.8849
Ulcerative colitisSpain78660.02617020838530.02504437109310.6900974023362356077.7199
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382