MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 09:56:16 PST
Job id & description: 2381, purine
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
NOM023_GL0054295564233CompleteK00912COG1663BacteroidetesBacteroides100.0100.0100.0
MH0381_GL0057923595007CompleteK06180COG0564FirmicutesDialister100.0100.0100.0
N022A_GL0019407615657Lack 3'-endK00777NOG09378unknownunknown100.0100.0100.0
MH0290_GL0120733804160CompleteK06997COG1496FirmicutesMitsuokella100.0100.0100.0
MH0238_GL0170198949400CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC47-0_GL01640301136759CompleteK01619COG0274unknownunknown100.0100.0100.0
O2.UC22-2_GL00266431498338CompleteK00777NOG09378unknownunknown100.0100.0100.0
V1.FI32_GL01267071825257CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0111_GL00597541900038CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI36_GL01263512053033Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
O2.UC24-2_GL00174612117340Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
MH0212_GL01539262240601CompleteK05810COG1496FirmicutesEubacterium100.0100.0100.0
MH0381_GL01094822242643Lack 5'-endK00777COG2820FirmicutesFaecalibacterium100.0100.0100.0
O2.UC2-2_GL01038102232348Lack 5'-endK03784COG0813Firmicutesunknown100.0100.0100.0
V1.UC51-4_GL00908512259159Lack 5'-endK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0322_GL00293182266682CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0021_GL00491462250331CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0128_GL00164602251554Lack 5'-endK00757COG2820BacteroidetesBacteroides100.0100.0100.0
T2D-34A_GL00442952286621Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
MH0132_GL00347382302705CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD45-0_GL01487512347791CompleteK05810COG1496FirmicutesEubacterium100.0100.0100.0
O2.UC2-2_GL00207992359185Lack 5'-endK03783COG0005FirmicutesClostridium100.0100.0100.0
764143897-stool1_revised2403214CompleteK05810COG1496unknownunknown100.0100.0100.0
765560005-stool1_revised2403360CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
O2.UC20-2_GL00216782397749CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0193_GL01906132470291CompleteK05810COG1496unknownunknown100.0100.0100.0
763577454-stool1_revised2492901CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0288_GL00667822433087CompleteK03783COG0005unknownunknown100.0100.0100.0
N085A_GL00163182478371CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0154_GL00724392495625CompleteK05810COG1496unknownunknown100.0100.0100.0
T2D-26A_GL00773642504892CompleteK05810COG1496unknownunknown100.0100.0100.0
NLF002_GL00217582477860CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
N009A_GL00338732478225CompleteK05810COG1496FirmicutesEubacterium100.0100.0100.0
T2D-33A_GL00488752465733CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC11-0_GL00899352476731CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0016_GL00734952467985CompleteK05810COG1496unknownunknown100.0100.0100.0
NLM006_GL00627862490842CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0182_GL00939282495886Lack 5'-endK00757COG2820BacteroidetesBacteroides100.0100.0100.0
V1.UC55-4_GL01309562516514CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0062_GL00662982468444CompleteK03783COG0005unknownunknown100.0100.0100.0
1006551.KOX_188952546362CompleteK03783COG1683;COG3272ProteobacteriaKlebsiella100.0100.0100.0
SZEY-40A_GL00401292544354CompleteK03783COG1683;COG3272ProteobacteriaEnterobacter100.0100.0100.0
469595.CSAG_011752546568CompleteK03783COG1683;COG3272ProteobacteriaCitrobacter100.0100.0100.0
MH0260_GL01196752536702CompleteK03783COG1683;COG3272ProteobacteriaKlebsiella100.0100.0100.0
T2D-108A_GL01674702544503CompleteK03783COG1683;COG3272ProteobacteriaEnterobacter100.0100.0100.0
1045856.EcWSU1_000752546372CompleteK03783COG1683;COG3272ProteobacteriaEnterobacter100.0100.0100.0
MH0139_GL00559912521784CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0427_GL00748292539219CompleteK05810COG1496FirmicutesRoseburia100.0100.0100.0
NLM027_GL00500112543836CompleteK03783COG1683;COG3272ProteobacteriaEnterobacter100.0100.0100.0
888063.HMPREF9086_44892546775CompleteK03783COG1683;COG3272ProteobacteriaEnterobacter100.0100.0100.0
DOM005_GL00053902543629CompleteK03783COG1683;COG3272ProteobacteriaEnterobacter100.0100.0100.0
V1.CD7-0-PN_GL00042122541928CompleteK03783COG1683;COG3272ProteobacteriaEnterobacter100.0100.0100.0
V1.UC4-5_GL01442112570654Lack 5'-endK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
MH0200_GL01729572549760CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
1049565.KPN2242_017502546379CompleteK03783COG1683;COG3272ProteobacteriaKlebsiella100.0100.0100.0
MH0113_GL00023612562054CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0172_GL00990912634437CompleteK05810COG1496unknownunknown100.0100.0100.0
SZEY-41A_GL00543832644191Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
MH0427_GL00619082609298Lack 5'-endK00757COG2820unknownunknown100.0100.0100.0
N011A_GL00789162629123CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0007_GL00097762617411CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0453_GL00467522595773CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC52-2_GL01355102655391Lack 5'-endK00757COG2820BacteroidetesBacteroides100.0100.0100.0
V1.UC60-0_GL00663322628282CompleteK03783COG0005FirmicutesFaecalibacterium100.0100.0100.0
NLM022_GL00876272614095CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0197_GL00490622664830CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0373_GL01145052608371Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0251_GL01048722740876CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0082_GL00733422693297Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
O2.UC44-2_GL02742742655152CompleteK03783COG0005BacteroidetesPorphyromonas100.0100.0100.0
888833.HMPREF9421_08362692082CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
MH0086_GL00752852738158CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0089_GL00081552678410CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0113_GL00061512678823CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0126_GL00325452709086CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0355_GL01887792682479CompleteK05810COG1496unknownunknown100.0100.0100.0
706846339-stool1_revised2691211CompleteK00757COG2820unknownunknown100.0100.0100.0
160400887-stool1_revised2691043CompleteK00757COG2820unknownunknown100.0100.0100.0
763577454-stool1_revised2691247Lack 5'-endK00757COG2820BacteroidetesBacteroides100.0100.0100.0
V1.CD20-4_GL01714982730924CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0086_GL00202042678327CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC30-0_GL00931162687777CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC53-0_GL01076572763534CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI33_GL01313172762759CompleteK00772COG0005Firmicutesunknown100.0100.0100.0
MH0053_GL00340662768533CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0135_GL00250972694196CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC49-0_GL00566402778913Lack 5'-endK05810COG1496FirmicutesEubacterium100.0100.0100.0
MH0262_GL00764132756485CompleteK05810COG1496unknownunknown100.0100.0100.0
457392.BSHG_004782751907CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0407_GL01116732774314CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD55-0_GL00684232777557Lack 5'-endK03783COG0005Firmicutesunknown100.0100.0100.0
763759525-stool1_revised2766819CompleteK05810COG1496FirmicutesRoseburia100.0100.0100.0
MH0260_GL00942512725953CompleteK03815COG0005Proteobacteriaunknown100.0100.0100.0
MH0327_GL00024172772733CompleteK05810COG1496FirmicutesRoseburia100.0100.0100.0
457424.BFAG_045282767421CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0013_GL00314242768136Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
MH0044_GL00422852722641CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
MH0086_GL00606842723067CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
MH0407_GL00339792728334Lack 5'-endK03783COG0005FirmicutesButyrivibrio100.0100.0100.0
MH0006_GL00421982783207CompleteK03783COG0005unknownunknown100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
genusRoseburia0.3572.19e-571.03e-54
speciesRoseburia_inulinivorans0.32.76e-406.51e-38
genusFaecalibacterium0.2995.84e-406.89e-38
speciesFaecalibacterium_prausnitzii0.2995.84e-406.89e-38
genusEubacterium0.2925.66e-385.2e-36
familyEubacteriaceae0.2916.61e-385.2e-36
familyPrevotellaceae-0.2773.37e-342.27e-32
familyBacteroidaceae0.2596.11e-303.2e-28
genusBacteroides0.2596.11e-303.2e-28
speciesPrevotella_copri-0.2589.01e-304.25e-28
genusPrevotella-0.2431.7e-267.29e-25
classMethanobacteria-0.2381.68e-255.66e-24
orderMethanobacteriales-0.2381.68e-255.66e-24
familyMethanobacteriaceae-0.2381.68e-255.66e-24
speciesMethanobrevibacter_smithii-0.2372.17e-256.83e-24
genusMethanobrevibacter-0.2358.54e-252.52e-23
speciesBacteroides_fragilis0.2349.11e-252.53e-23
speciesEubacterium_rectale0.2341.07e-242.81e-23
speciesRoseburia_intestinalis0.2331.74e-244.32e-23
phylumEuryarchaeota-0.2256.67e-231.57e-21
speciesBacteroides_ovatus0.2231.94e-224.36e-21
classClostridia0.2121.87e-203.84e-19
orderClostridiales0.2121.87e-203.84e-19
speciesEubacterium_eligens0.1984.94e-189.72e-17
genusCatenibacterium-0.1942.85e-175.17e-16
speciesCatenibacterium_mitsuokai-0.1942.85e-175.17e-16
speciesEubacterium_biforme-0.1933.16e-175.52e-16
speciesVeillonella_parvula0.1891.53e-162.57e-15
familyLachnospiraceae0.1891.58e-162.57e-15
genusErysipelotrichaceae_noname-0.1873.79e-165.96e-15
genusVeillonella0.1865.47e-168.33e-15
speciesLachnospiraceae_bacterium_5_1_63FAA0.1841.07e-151.58e-14
speciesDesulfovibrio_piger-0.1822.21e-153.16e-14
genusDesulfovibrio-0.1761.6e-142.22e-13
familyAcidaminococcaceae-0.1743.12e-144.21e-13
speciesVeillonella_unclassified0.1711.06e-131.36e-12
speciesAlistipes_senegalensis-0.1711.07e-131.36e-12
genusOlsenella-0.1673.58e-134.45e-12
classErysipelotrichia-0.1656.08e-137e-12
orderErysipelotrichales-0.1656.08e-137e-12
familyErysipelotrichaceae-0.1656.08e-137e-12
genusCollinsella-0.1631.14e-121.28e-11
speciesOlsenella_unclassified-0.1631.44e-121.58e-11
speciesMethanobrevibacter_unclassified-0.163.57e-123.83e-11
phylumFirmicutes0.1594.68e-124.91e-11
speciesAlistipes_indistinctus-0.1578.22e-128.43e-11
genusPhascolarctobacterium-0.1533.08e-113.03e-10
speciesPhascolarctobacterium_succinatutens-0.1533.08e-113.03e-10
speciesHaemophilus_parainfluenzae0.156.16e-115.93e-10
speciesVeillonella_atypica0.1491.06e-101e-09
orderPasteurellales0.1481.28e-101.15e-09
familyPasteurellaceae0.1481.28e-101.15e-09
genusHaemophilus0.1481.29e-101.15e-09
speciesCollinsella_aerofaciens-0.1481.32e-101.15e-09
genusOxalobacter-0.1471.67e-101.41e-09
speciesOxalobacter_formigenes-0.1471.67e-101.41e-09
speciesRoseburia_unclassified-0.1462.26e-101.87e-09
familyOxalobacteraceae-0.1443.54e-102.88e-09
speciesParaprevotella_unclassified-0.1435.6e-104.48e-09
genusParaprevotella-0.141.06e-098.34e-09
speciesEggerthella_unclassified0.1372.69e-092.08e-08
genusEggerthella0.1346.31e-094.56e-08
phylumVerrucomicrobia-0.1346.57e-094.56e-08
classVerrucomicrobiae-0.1346.57e-094.56e-08
orderVerrucomicrobiales-0.1346.57e-094.56e-08
familyVerrucomicrobiaceae-0.1346.57e-094.56e-08
genusAkkermansia-0.1346.57e-094.56e-08
speciesAkkermansia_muciniphila-0.1346.57e-094.56e-08
speciesRuminococcus_gnavus0.131.87e-081.28e-07
speciesVeillonella_dispar0.1273.67e-082.47e-07
speciesParaprevotella_clara-0.1265.05e-083.34e-07
genusSubdoligranulum-0.1265.1e-083.34e-07
speciesDialister_invisus0.1256.06e-083.92e-07
speciesEubacterium_siraeum-0.1239.47e-086.04e-07
speciesParaprevotella_xylaniphila-0.1211.52e-079.57e-07
genusLachnospiraceae_noname0.1211.58e-079.81e-07
speciesSubdoligranulum_unclassified-0.1183.21e-071.97e-06
genusKlebsiella0.1155.57e-073.37e-06
genusMethanosphaera-0.1155.76e-073.4e-06
speciesMethanosphaera_stadtmanae-0.1155.76e-073.4e-06
speciesKlebsiella_pneumoniae0.1156.83e-073.98e-06
speciesParabacteroides_merdae-0.1121.27e-067.31e-06
speciesBacteroides_thetaiotaomicron0.111.84e-061.05e-05
speciesClostridium_citroniae0.112.05e-061.15e-05
genusFlavonifractor0.1082.58e-061.42e-05
speciesFlavonifractor_plautii0.1082.58e-061.42e-05
speciesStreptococcus_australis0.1082.84e-061.54e-05
genusHoldemania0.1082.87e-061.54e-05
speciesLachnospiraceae_bacterium_1_1_57FAA0.1073.5e-061.86e-05
speciesSubdoligranulum_sp_4_3_54A2FAA-0.1064.37e-062.29e-05
speciesMitsuokella_multacida-0.1054.93e-062.56e-05
speciesStreptococcus_salivarius0.1055.39e-062.77e-05
genusDialister0.1047.17e-063.64e-05
genusBurkholderiales_noname0.1037.36e-063.66e-05
speciesBurkholderiales_bacterium_1_1_470.1037.36e-063.66e-05
speciesEubacterium_ventriosum0.1037.47e-063.67e-05
familyBurkholderiales_noname0.1037.95e-063.87e-05
speciesBacteroides_xylanisolvens0.1038.55e-064.12e-05
speciesBacteroides_eggerthii-0.1029.37e-064.47e-05
speciesRuminococcus_sp_5_1_39BFAA0.11.35e-056.37e-05
orderCoriobacteriales-0.11.43e-056.62e-05
familyCoriobacteriaceae-0.11.43e-056.62e-05
genusPeptostreptococcaceae_noname0.11.5e-056.85e-05
genusAnaerotruncus-0.11.51e-056.85e-05
speciesBifidobacterium_adolescentis-0.11.6e-057.19e-05
speciesClostridium_bartlettii0.0991.95e-058.68e-05
genusAcidaminococcus-0.0972.91e-050.000128
speciesDorea_unclassified-0.0963.35e-050.000146
speciesRuminococcus_champanellensis-0.0963.46e-050.00015
speciesClostridium_symbiosum0.0953.69e-050.000158
speciesSutterella_wadsworthensis-0.0944.67e-050.000199
speciesBifidobacterium_pseudocatenulatum0.0935.54e-050.000233
speciesAnaerotruncus_unclassified-0.0935.76e-050.000241
genusBarnesiella-0.0936e-050.000246
speciesBarnesiella_intestinihominis-0.0936e-050.000246
genusSutterella-0.0926.7e-050.000273
speciesClostridium_bolteae0.0918.08e-050.000326
familyPeptostreptococcaceae0.0918.35e-050.000334
speciesAnaerostipes_hadrus0.099.24e-050.000366
genusStreptococcus0.099.37e-050.000369
speciesAlistipes_shahii-0.0880.0001450.000564
genusParasutterella0.0880.0001470.000564
speciesParasutterella_excrementihominis0.0880.0001470.000564
speciesMitsuokella_unclassified-0.0880.000150.000571
genusPseudoflavonifractor-0.0870.0001670.000626
speciesPseudoflavonifractor_capillosus-0.0870.0001670.000626
genusActinobacillus0.0870.0001740.000642
speciesActinobacillus_unclassified0.0870.0001740.000642
speciesEubacterium_sp_3_1_310.0860.0001840.000673
genusMitsuokella-0.0860.0001940.000704
familyStreptococcaceae0.0850.0002270.000818
speciesParabacteroides_goldsteinii-0.0850.0002510.000898
speciesEubacterium_cylindroides-0.0840.000290.00103
speciesAcidaminococcus_unclassified-0.0830.0003090.00109
speciesKlebsiella_sp_MS_92_30.0820.0003910.00137
familyFusobacteriaceae0.0820.0004020.0014
speciesLachnospiraceae_bacterium_1_4_56FAA0.0820.0004140.00143
speciesDesulfovibrio_desulfuricans-0.0810.0004560.00156
familyVeillonellaceae0.0810.0004780.00161
phylumFusobacteria0.0810.0004850.00161
classFusobacteriia0.0810.0004850.00161
orderFusobacteriales0.0810.0004850.00161
speciesClostridium_hathewayi0.0780.0006930.00229
speciesMegasphaera_micronuciformis0.0780.0007640.00249
genusFusobacterium0.0780.0007650.00249
speciesCoprobacillus_unclassified0.0770.0008460.00274
speciesLactobacillus_rhamnosus-0.0760.001050.00337
speciesHoldemania_unclassified0.0760.001070.00341
speciesBacteroides_plebeius-0.0750.001140.00361
speciesFusobacterium_ulcerans0.0750.001180.00371
genusRuminococcus0.0750.001240.00388
speciesPrevotella_stercorea-0.0740.001450.0045
speciesHaemophilus_sputorum0.0730.001510.00466
speciesCitrobacter_unclassified0.0730.001530.00469
speciesClostridium_nexile0.0730.001650.00502
genusRuminococcaceae_noname-0.0730.00170.00511
speciesRuminococcaceae_bacterium_D16-0.0730.00170.00511
familyRuminococcaceae0.0720.001790.00531
familyBacteroidales_noname-0.0720.001810.00531
genusBacteroidales_noname-0.0720.001810.00531
speciesBacteroidales_bacterium_ph8-0.0720.001810.00531
genusAnaerostipes0.0720.001930.00562
speciesWeissella_confusa0.0710.002120.00614
speciesRuminococcus_lactaris0.0710.002170.00625
speciesLactobacillus_sanfranciscensis0.0710.002220.00635
speciesEubacterium_ramulus0.0710.002280.00648
speciesEubacterium_limosum-0.070.00230.0065
familyPorphyromonadaceae-0.0690.002880.00809
speciesLeuconostoc_lactis0.0690.002930.00818
genusCoprobacter-0.0680.003270.009
speciesCoprobacter_fastidiosus-0.0680.003270.009
speciesKlebsiella_oxytoca0.0680.003280.009
genusCitrobacter0.0680.003440.00939
speciesBacteroides_cellulosilyticus0.0670.003610.00979
genusSutterellaceae_unclassified-0.0670.003890.0105
speciesEnterobacter_cloacae0.0670.00390.0105
speciesClostridium_leptum-0.0660.004020.0107
genusEnterobacter0.0660.004040.0107
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0660.004120.0109
genusPropionibacterium-0.0660.004260.0112
speciesBacteroides_pectinophilus-0.0660.004390.0114
speciesMegasphaera_unclassified-0.0660.004480.0116
speciesLactobacillus_ruminis-0.0650.004830.0125
familySiphoviridae-0.0650.004960.0127
speciesBacteroides_coprophilus-0.0650.004960.0127
speciesFusobacterium_mortiferum0.0640.005460.0139
speciesStreptococcus_parasanguinis0.0640.005730.0145
speciesAcidaminococcus_fermentans-0.0630.006090.0153
genusSuccinatimonas-0.0630.006310.0157
speciesSuccinatimonas_hippei-0.0630.006310.0157
speciesLachnospiraceae_bacterium_2_1_58FAA0.0630.006570.0162
speciesCoprobacillus_sp_29_1-0.0630.006650.0163
speciesBacteroides_finegoldii-0.0630.006740.0165
genusC2likevirus-0.0620.00720.0175
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speciesBacteroides_coprocola0.0580.01150.0258
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genusButyrivibrio-0.050.03160.0619
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speciesAlistipes_sp_AP11-0.0490.0350.0672
speciesRuminococcus_sp_JC304-0.0480.03610.069
speciesBacteroides_barnesiae-0.0480.03690.0702
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speciesBifidobacterium_catenulatum-0.0480.03830.0723
speciesLachnospiraceae_bacterium_2_1_46FAA0.0480.03940.0741
genusEnterococcus-0.0480.040.0749
familyEnterococcaceae-0.0470.04110.0767
speciesFusobacterium_nucleatum0.0470.04370.0812
speciesBacteroides_uniformis0.0460.04460.0826
speciesRuminococcus_bromii0.0460.04530.0835
speciesCoriobacteriaceae_bacterium_phI-0.0460.04660.0856
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speciesLactobacillus_crispatus-0.0460.04890.0891
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speciesCoprococcus_sp_ART55_1-0.0450.05110.0924
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genusBlautia0.0450.05170.0928
genusTuricibacter0.0450.0530.0948
speciesLachnospiraceae_bacterium_6_1_63FAA0.0450.0540.0962
speciesPeptostreptococcaceae_noname_unclassified0.0430.06060.108
familyBacillales_noname0.0430.06180.109
genusGemella0.0430.06180.109
familyLeuconostocaceae0.0430.06330.111
familyRikenellaceae-0.0420.06690.117
genusAlistipes-0.0420.06690.117
classGammaproteobacteria0.0420.06720.117
speciesBacteroides_nordii0.0420.06770.117
speciesAlistipes_finegoldii-0.0420.06870.118
speciesEggerthella_sp_1_3_56FAA0.0420.06910.119
genusClostridiaceae_noname0.0420.07080.121
speciesClostridiaceae_bacterium_JC1180.0420.07080.121
speciesStreptococcus_vestibularis0.0420.07210.122
genusParvimonas-0.0410.07360.124
speciesParabacteroides_unclassified0.0410.07360.124
genusCoriobacteriaceae_noname-0.0410.07410.124
speciesParvimonas_unclassified-0.0410.07420.124
speciesOscillibacter_sp_KLE_17280.040.08240.137
speciesHoldemania_filiformis0.040.08290.138
speciesAggregatibacter_segnis0.0390.08860.147
speciesFusobacterium_varium0.0390.09560.158
speciesKlebsiella_unclassified0.0380.09620.158
speciesBifidobacterium_angulatum-0.0380.09790.16
speciesBacteroides_stercoris-0.0380.09960.163
genusMyoviridae_noname0.0380.1020.166
speciesStreptococcus_infantarius0.0380.1030.167
speciesStreptococcus_sanguinis0.0380.1050.17
genusParabacteroides-0.0370.1060.17
speciesRuminococcus_obeum0.0370.1060.17
genusLactobacillus-0.0370.1110.178
speciesBacteroides_intestinalis0.0370.1130.18
genusActinomyces-0.0360.1160.184
speciesAlistipes_putredinis-0.0360.1180.187
speciesLactobacillus_mucosae-0.0360.1190.188
speciesClostridium_perfringens0.0350.1290.203
speciesCoprobacillus_sp_D6-0.0350.1330.209
speciesLactobacillus_gasseri-0.0340.1380.216
familyActinomycetaceae-0.0340.140.218
speciesAcidaminococcus_intestini-0.0340.1410.219
genusGordonibacter0.0340.1430.221
speciesGordonibacter_pamelaeae0.0340.1430.221
speciesBifidobacterium_animalis-0.0340.1440.221
speciesRuminococcus_torques0.0340.1440.221
familySutterellaceae-0.0330.1490.228
genusSlackia-0.0330.150.228
speciesBilophila_wadsworthia0.0330.1530.232
familyLactobacillaceae-0.0330.1560.235
speciesOdoribacter_laneus-0.0330.1560.235
orderEnterobacteriales0.0330.1580.237
familyEnterobacteriaceae0.0330.1580.237
speciesEnterococcus_faecalis-0.0320.160.238
speciesDialister_succinatiphilus-0.0320.160.238
orderAeromonadales-0.0320.1610.238
familyClostridiales_noname0.0320.1610.238
speciesProteus_mirabilis0.0320.1640.242
speciesLactobacillus_reuteri-0.0320.1670.246
speciesBlautia_producta0.0320.1680.246
classDeltaproteobacteria-0.0320.170.247
orderDesulfovibrionales-0.0320.170.247
familyDesulfovibrionaceae-0.0320.170.247
speciesPrevotella_buccae0.0310.1730.25
orderBifidobacteriales-0.0310.1750.252
familyBifidobacteriaceae-0.0310.1750.252
speciesBacteroides_caccae0.0310.1770.254
speciesMegamonas_hypermegale-0.0310.1820.26
genusSiphoviridae_noname-0.030.1920.274
classBetaproteobacteria-0.030.1940.276
orderBurkholderiales-0.030.2010.284
speciesCollinsella_unclassified-0.030.2010.284
genusBifidobacterium-0.0290.2050.289
speciesClostridium_spiroforme-0.0290.2070.291
speciesLactococcus_phage_P680-0.0290.2080.291
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0290.2090.292
speciesPorphyromonas_uenonis-0.0290.2110.294
speciesStreptococcus_lutetiensis0.0280.2190.304
genusMegasphaera-0.0280.2250.311
speciesPeptostreptococcus_anaerobius-0.0280.2290.316
speciesErysipelotrichaceae_bacterium_3_1_530.0280.230.317
speciesBacteroides_fluxus-0.0270.2360.324
speciesPeptostreptococcus_stomatis-0.0270.2390.327
speciesMegamonas_funiformis-0.0270.240.327
speciesClostridium_ramosum0.0260.2540.345
speciesBilophila_unclassified0.0260.2580.35
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0260.2640.356
speciesErysipelotrichaceae_bacterium_6_1_45-0.0260.2640.356
genusBilophila0.0260.2670.358
speciesParabacteroides_johnsonii-0.0260.2670.358
speciesParabacteroides_sp_D13-0.0260.270.361
genusCoprococcus-0.0250.2710.361
speciesWeissella_cibaria0.0250.2730.363
genusProteus0.0250.2740.363
speciesBifidobacterium_longum0.0250.2870.379
speciesTuricibacter_sanguinis0.0250.2890.381
speciesAlistipes_unclassified-0.0240.2960.389
genusButyricicoccus-0.0240.2990.391
speciesButyricicoccus_pullicaecorum-0.0240.2990.391
genusMorganella0.0240.3030.394
speciesMorganella_morganii0.0240.3030.394
speciesSlackia_piriformis-0.0230.3150.408
genusSolobacterium0.0230.3170.409
speciesSolobacterium_moorei0.0230.3170.409
genusPeptostreptococcus-0.0230.3180.409
speciesBacteroides_sp_2_1_220.0230.3220.413
speciesCollinsella_tanakaei-0.0230.330.422
genusLactococcus-0.0230.3310.422
orderActinomycetales-0.0220.3360.426
speciesCampylobacter_concisus0.0220.3360.426
speciesLactobacillus_amylovorus-0.0220.3380.427
speciesStreptococcus_thermophilus-0.0220.3380.427
speciesBacteroides_clarus-0.0220.3390.427
familyPodoviridae0.0220.3420.427
genusPorphyromonas-0.0220.3420.427
speciesBifidobacterium_breve-0.0220.3420.427
speciesLactobacillus_vaginalis-0.0220.3510.437
speciesLactococcus_phage_jm2-0.0210.3610.448
speciesOscillibacter_unclassified-0.0210.3640.451
speciesLactococcus_lactis-0.0210.3650.451
speciesGemella_morbillorum0.0210.3710.457
speciesBifidobacterium_dentium-0.020.3890.478
genusLeuconostoc0.020.3950.484
speciesBacteroides_sp_1_1_6-0.020.3990.488
speciesKlebsiella_phage_KP360.0190.4130.504
speciesStreptococcus_phage_Sfi210.0190.4150.505
speciesLactobacillus_delbrueckii-0.0180.4290.521
familyClostridiales_Family_XI_Incertae_Sedis-0.0180.4380.53
speciesSutterella_parvirubra0.0170.4550.549
speciesParabacteroides_sp_20_3-0.0170.4560.549
speciesEubacterium_hallii0.0170.470.564
speciesAlistipes_sp_HGB5-0.0160.4960.594
speciesLactococcus_garvieae0.0160.4970.594
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0150.530.632
speciesPrevotella_bivia0.0140.5330.632
speciesStreptococcus_anginosus0.0140.5330.632
speciesCollinsella_intestinalis-0.0140.5420.641
familyMyoviridae0.0140.5460.644
speciesHaemophilus_paraphrohaemolyticus0.0140.5510.648
speciesRothia_mucilaginosa0.0140.5530.648
genusMegamonas-0.0140.5560.648
genusTunalikevirus0.0140.5570.648
familyOscillospiraceae-0.0140.5590.648
genusOscillibacter-0.0140.5590.648
speciesLactobacillus_plantarum0.0140.5590.648
speciesMegamonas_unclassified-0.0130.5610.649
familyStaphylococcaceae0.0130.570.656
speciesPorphyromonas_asaccharolytica-0.0130.5710.656
classNegativicutes-0.0130.5730.656
orderSelenomonadales-0.0130.5730.656
genusClostridiales_noname0.0130.5750.657
speciesLactobacillus_acidophilus0.0130.5770.658
genusDorea-0.0130.5790.659
orderPseudomonadales-0.0120.590.669
speciesLactobacillus_salivarius-0.0120.5960.675
speciesLactococcus_phage_phi7-0.0120.5990.676
speciesAlistipes_onderdonkii-0.0120.6030.679
speciesCoprococcus_comes-0.0120.6060.681
speciesStreptococcus_pasteurianus-0.0120.6070.681
phylumProteobacteria0.0120.6110.683
speciesOscillibacter_sp_KLE_1745-0.0120.6160.687
speciesButyrivibrio_unclassified-0.0110.620.69
genusPantoea-0.0110.6240.691
speciesPantoea_unclassified-0.0110.6240.691
speciesRuminococcus_callidus0.0110.6250.691
speciesEscherichia_coli-0.0110.6390.705
classEpsilonproteobacteria-0.0110.6430.706
orderCampylobacterales-0.0110.6430.706
speciesClostridium_sp_L2_500.0110.6470.709
familyViruses_noname-0.010.660.719
genusViruses_noname-0.010.660.719
genusPeptoniphilus0.010.6720.731
speciesClostridium_clostridioforme0.0090.6820.74
speciesBlautia_hydrogenotrophica0.0090.6910.748
speciesLactobacillus_fermentum-0.0090.6950.751
speciesLactococcus_phage_936_sensu_lato-0.0090.7010.755
speciesEnterobacteria_phage_HK5440.0090.7030.756
speciesLactococcus_phage_bIL670.0080.7230.776
speciesEubacterium_dolichum-0.0080.7340.786
speciesMegamonas_rupellensis0.0080.7380.788
speciesBacteroides_sp_4_3_47FAA-0.0080.7460.795
familyMicrococcaceae-0.0070.7520.798
genusPyramidobacter0.0070.7550.798
speciesPyramidobacter_piscolens0.0070.7550.798
speciesAnaerostipes_unclassified-0.0070.7560.798
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0070.7580.799
speciesBacteroides_massiliensis-0.0070.7670.806
genusRothia-0.0070.770.808
speciesCoprococcus_catus-0.0060.7830.819
speciesStreptococcus_mutans0.0060.7980.833
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0050.8280.863
genusCampylobacter0.0050.8340.865
speciesOdoribacter_unclassified0.0050.8340.865
speciesStreptococcus_gordonii0.0050.8430.873
speciesClostridium_sp_ATCC_BAA_442-0.0040.8540.882
genusEscherichia-0.0040.860.884
speciesLachnospiraceae_bacterium_5_1_57FAA0.0040.860.884
speciesParabacteroides_distasonis-0.0040.8720.895
genusStaphylococcus0.0040.8750.896
phylumSynergistetes-0.0030.8910.904
classSynergistia-0.0030.8910.904
orderSynergistales-0.0030.8910.904
familySynergistaceae-0.0030.8910.904
speciesClostridium_sp_KLE_1755-0.0030.910.922
genusLambdalikevirus0.0030.9120.922
speciesEscherichia_unclassified0.0020.9230.931
speciesBacteroides_salyersiae0.0010.9570.963
orderViruses_noname0.0010.9590.963
familyCampylobacteraceae0.0010.970.972
speciesBacteroides_sp_3_1_190.00.9970.997
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Colorectal cancerAustria64350.1410387650670.1866148506470.015252328830810423.52551
Type II diabetesChina1831850.1776723188460.1963781404620.1821499358161273442.0833
Liver cirrhosisChina1201140.2128404733430.2115204010210.2972515709582087470.1199
Type II diabetesDenmark752770.1628435233820.172197238380.318912720811623053.2009
Type II diabetesSweden53920.2103226952750.2004313216780.3828184939381251442.3772
ObesityDenmark1691230.1748843795940.1680597463720.6415659933782259174.2856
Rheumatoid arthritisChina127980.2149659399470.2162730654870.7433812739952353778.4907
Ulcerative colitisSpain78660.178997796750.1778539565140.8768653654692746790.6083
Crohns diseaseSpain17660.1801768947370.1778539565140.9056875994362893996.2228
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382