MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 09:57:10 PST
Job id & description: 2382, purine2
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0069_GL00126682784110CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0236_GL00921012786760CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
MH0385_GL00869462804592CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC59-2_GL00317322792017CompleteK03783COG0005FirmicutesRuminococcus100.0100.0100.0
MH0418_GL01527532820712Lack 5'-endK05810COG1496Firmicutesunknown100.0100.0100.0
MH0101_GL00503322784591CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0265_GL01181462849381CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0333_GL00831662866037CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0006_GL00869972845276CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI07_GL00621142808547Lack 5'-endK03783COG0005FirmicutesFaecalibacterium100.0100.0100.0
686765762-stool2_revised2812918Lack 5'-endK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0006_GL00582872783210CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0086_GL00695802784281CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0187_GL00712922816736CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0363_GL00481442835198CompleteK05810COG1496unknownunknown100.0100.0100.0
764285508-stool1_revised2844408Lack 5'-endK03783COG0005FirmicutesRoseburia100.0100.0100.0
N083A_GL00016212795541Lack 5'-endK03783COG0005Firmicutesunknown100.0100.0100.0
O2.UC13-1_GL00401442868843CompleteK05810COG1496unknownunknown100.0100.0100.0
T2D-10A_GL00802762858241CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
MH0429_GL01509432852277Lack 5'-endK05810COG1496FirmicutesBlautia100.0100.0100.0
O2.UC2-2_GL00777682853493CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC4-1_GL01340082869520CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
MH0206_GL00890212895612CompleteK05810COG1496unknownunknown100.0100.0100.0
N051A_GL00301432857904Lack 5'-endK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
SZEY-75A_GL00438742873613CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0288_GL01753542865512CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0376_GL00402392914228CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
MH0075_GL00571392909125CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
MH0143_GL01568422800608CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC13-0_GL00536192916233CompleteK05810COG1496FirmicutesEubacterium100.0100.0100.0
O2.UC3-0_GL00984562900764CompleteK05810COG1496FirmicutesRuminococcus100.0100.0100.0
160178356-stool1_revised2859751Lack 5'-endK00757COG2820BacteroidetesAlistipes100.0100.0100.0
MH0111_GL00491412893845CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0308_GL01370902912949CompleteK05810COG1496FirmicutesEubacterium100.0100.0100.0
O2.UC15-1_GL00181882853291CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0322_GL00521682834465Lack 5'-endK03783COG0005Firmicutesunknown100.0100.0100.0
MH0345_GL00862932913539CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0438_GL02307502868205Lack 5'-endK00757COG2820Bacteroidetesunknown100.0100.0100.0
O2.UC2-1_GL01145232932449CompleteK05810COG1496unknownunknown100.0100.0100.0
T2D-143A_GL00542132921519Lack 5'-endK05810COG1496FirmicutesCoprococcus100.0100.0100.0
604812005-stool2_revised2859914Lack 5'-endK00757COG2820BacteroidetesAlistipes100.0100.0100.0
MH0143_GL00991612863176CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0222_GL00939982911565CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
O2.UC18-2_GL01461732900423Lack 5'-endK00757COG2820BacteroidetesBacteroides100.0100.0100.0
T2D-62A_GL00267022890020CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
V1.UC39-0_GL00342222903567CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0009_GL00760642924271CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
MH0044_GL00623722924799CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
MH0336_GL00066722913371CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
MH0381_GL00188652914306CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
T2D-173A_GL00604992889695Lack 5'-endK05810COG1496FirmicutesRoseburia100.0100.0100.0
T2D-47A_GL00376102921783CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
V1.UC61-0_GL00402082903985CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0055_GL00543392908904CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0281_GL01154832896831CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0435_GL01831352915477CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
O2.UC9-0_GL01338412885605Lack 5'-endK03783COG0005FirmicutesRuminococcus100.0100.0100.0
V1.CD21-0_GL00162922933731CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0165_GL00116682926592CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0197_GL01714282911214Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0206_GL02535102817308CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0252_GL02238872912136CompleteK03783COG0005unknownunknown100.0100.0100.0
NLM022_GL00410852888588CompleteK03783COG0005FirmicutesEubacterium100.0100.0100.0
O2.CD2-0_GL00736292931991CompleteK00757COG2820unknownunknown100.0100.0100.0
O2.UC28-0_GL01807902900677Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
V1.CD54-0_GL01264572934207CompleteK05810COG1496unknownunknown100.0100.0100.0
716541.ECL_000842939580CompleteunknownCOG1683;COG3272ProteobacteriaEnterobacter100.0100.0100.0
ED16A_GL01403012906151Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
MH0407_GL01966492914863CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
O2.CD3-0-PT_GL00079492900118Lack 5'-endK00757COG2820BacteroidetesBacteroides100.0100.0100.0
V1.FI17_GL02309592918754Lack 5'-endK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0012_GL02325072924459CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0031_GL00249592924655CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0047_GL00224952908787CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0047_GL00341742924842CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0055_GL00282542924948CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0107_GL00805402925665CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0181_GL00203962926763CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0199_GL01452252895471CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0003_GL00706532940012CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0047_GL00266712924834CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0122_GL00800012862756CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0172_GL00211472926650CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0011_GL00212142924290CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0012_GL01344002924394CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0057_GL00222032924972CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0106_GL00509232925643CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0239_GL00419472927840CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
SZEY-39A_GL00781452937171CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0046_GL00007222924807CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0336_GL00590412929355CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0441_GL00557112915578CompleteK05810COG1496unknownunknown100.0100.0100.0
N103A_GL00787092921047CompleteK00777NOG09378BacteroidetesBacteroides100.0100.0100.0
159753524-stool1_revised2922774CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0276_GL01010322912546CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0162_GL00249742910574Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
T2D-31A_GL00843192811615CompleteK03783COG1683;COG0005unknownunknown100.0100.0100.0
MH0086_GL01151682909237CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0183_GL01362292926809CompleteK05810COG1496unknownunknown100.0100.0100.0
521003.COLINT_037762907713CompleteK03783COG1683;COG0005ActinobacteriaCollinsella100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyBacteroidaceae0.7332.15999999978e-3145.1e-312
genusBacteroides0.7332.15999999978e-3145.1e-312
phylumBacteroidetes0.4621.46e-991.38e-97
classBacteroidia0.4621.46e-991.38e-97
orderBacteroidales0.4621.46e-991.38e-97
speciesBacteroides_stercoris0.4282.8e-842.2e-82
speciesBacteroides_vulgatus0.3818.77e-665.91e-64
speciesBacteroides_thetaiotaomicron0.3731.11e-626.55e-61
speciesBacteroides_ovatus0.3722.41e-621.26e-60
classMethanobacteria-0.3655.61e-602.21e-58
orderMethanobacteriales-0.3655.61e-602.21e-58
familyMethanobacteriaceae-0.3655.61e-602.21e-58
speciesBacteroides_uniformis0.3631.77e-596.43e-58
genusMethanobrevibacter-0.3627.09e-592.39e-57
speciesMethanobrevibacter_smithii-0.3611.36e-584.28e-57
phylumEuryarchaeota-0.3611.71e-585.04e-57
speciesDorea_longicatena-0.3498.82e-552.45e-53
speciesSubdoligranulum_unclassified-0.3491.23e-543.23e-53
speciesCollinsella_aerofaciens-0.3482.76e-546.86e-53
genusSubdoligranulum-0.3468.57e-542.02e-52
phylumFirmicutes-0.3444.55e-531.02e-51
speciesCoprococcus_catus-0.3413.66e-527.85e-51
genusDorea-0.3383.04e-516.24e-50
genusCoprococcus-0.336.94e-491.36e-47
genusFlavonifractor0.3261.23e-472.23e-46
speciesFlavonifractor_plautii0.3261.23e-472.23e-46
genusOlsenella-0.3253.79e-476.63e-46
speciesBifidobacterium_adolescentis-0.3245.68e-479.57e-46
genusErysipelotrichaceae_noname-0.3247.78e-471.27e-45
speciesEubacterium_biforme-0.3231.29e-462.03e-45
genusCollinsella-0.3221.69e-462.57e-45
speciesOlsenella_unclassified-0.3213.33e-464.91e-45
orderCoriobacteriales-0.3191.93e-452.68e-44
familyCoriobacteriaceae-0.3191.93e-452.68e-44
classErysipelotrichia-0.3176.22e-457.93e-44
orderErysipelotrichales-0.3176.22e-457.93e-44
familyErysipelotrichaceae-0.3176.22e-457.93e-44
genusParabacteroides0.3161.17e-441.45e-43
speciesRuminococcus_gnavus0.3066.2e-427.5e-41
speciesBacteroides_xylanisolvens0.3042.57e-413.03e-40
phylumActinobacteria-0.3043.58e-414.02e-40
classActinobacteria-0.3043.58e-414.02e-40
familyRuminococcaceae-0.2933.05e-383.35e-37
speciesClostridium_bolteae0.2916.17e-386.62e-37
speciesPrevotella_copri-0.2916.32e-386.63e-37
speciesCoprococcus_comes-0.2798.62e-358.84e-34
classClostridia-0.2773.32e-343.26e-33
orderClostridiales-0.2773.32e-343.26e-33
speciesEubacterium_siraeum-0.2732.22e-332.14e-32
speciesClostridium_citroniae0.271.17e-321.1e-31
familyPrevotellaceae-0.2691.84e-321.7e-31
speciesRuminococcus_obeum-0.2683.41e-323.1e-31
speciesClostridiales_bacterium_1_7_47FAA0.2642.84e-312.53e-30
speciesMitsuokella_unclassified-0.262.98e-302.6e-29
genusCatenibacterium-0.2589.45e-307.96e-29
speciesCatenibacterium_mitsuokai-0.2589.45e-307.96e-29
speciesMethanobrevibacter_unclassified-0.2562.05e-291.7e-28
genusMitsuokella-0.2562.47e-292.01e-28
speciesDorea_formicigenerans-0.2531.02e-288.16e-28
genusPrevotella-0.2512.82e-282.22e-27
orderBifidobacteriales-0.253.81e-282.9e-27
familyBifidobacteriaceae-0.253.81e-282.9e-27
genusBifidobacterium-0.2481.15e-278.62e-27
speciesClostridium_symbiosum0.2464.02e-272.96e-26
genusButyrivibrio-0.2455.35e-273.88e-26
speciesAnaerotruncus_unclassified-0.2414.32e-263.09e-25
speciesEubacterium_hallii-0.247.82e-265.51e-25
familyPorphyromonadaceae0.237.26e-245.04e-23
speciesButyrivibrio_crossotus-0.2256.07e-234.15e-22
phylumVerrucomicrobia-0.2241.24e-227.8e-22
classVerrucomicrobiae-0.2241.24e-227.8e-22
orderVerrucomicrobiales-0.2241.24e-227.8e-22
familyVerrucomicrobiaceae-0.2241.24e-227.8e-22
genusAkkermansia-0.2241.24e-227.8e-22
speciesAkkermansia_muciniphila-0.2241.24e-227.8e-22
speciesEubacterium_ramulus-0.2198.15e-225.06e-21
speciesClostridium_asparagiforme0.2198.35e-225.12e-21
genusPhascolarctobacterium-0.2113.06e-201.83e-19
speciesPhascolarctobacterium_succinatutens-0.2113.06e-201.83e-19
orderLactobacillales-0.2081.08e-196.37e-19
classBacilli-0.2062.36e-191.38e-18
familyClostridiales_noname0.2054.14e-192.38e-18
phylumFusobacteria0.2044.48e-192.49e-18
classFusobacteriia0.2044.48e-192.49e-18
orderFusobacteriales0.2044.48e-192.49e-18
familyFusobacteriaceae0.2021.37e-187.52e-18
genusFusobacterium0.22.99e-181.62e-17
speciesBacteroides_fragilis0.1993.24e-181.74e-17
genusMethanosphaera-0.1961.43e-177.5e-17
speciesMethanosphaera_stadtmanae-0.1961.43e-177.5e-17
speciesBacteroides_massiliensis0.1951.9e-179.85e-17
familyActinomycetaceae-0.1933.6e-171.85e-16
speciesLachnospiraceae_bacterium_1_4_56FAA0.1918.34e-174.23e-16
familyLachnospiraceae-0.1919.6e-174.82e-16
genusActinomyces-0.199.77e-174.85e-16
familyAcidaminococcaceae-0.191.2e-165.9e-16
familyLactobacillaceae-0.1891.78e-168.66e-16
genusLactobacillus-0.1873.05e-161.47e-15
speciesClostridium_nexile0.1873.93e-161.87e-15
speciesEggerthella_unclassified0.1865.54e-162.61e-15
speciesAnaerostipes_hadrus-0.1821.95e-159.11e-15
genusBilophila0.1822.35e-151.09e-14
speciesAlistipes_senegalensis-0.1822.47e-151.13e-14
speciesBilophila_unclassified0.1812.85e-151.29e-14
speciesFusobacterium_mortiferum0.1761.96e-148.81e-14
orderActinomycetales-0.1762.03e-149.04e-14
speciesLactobacillus_ruminis-0.1743.33e-141.46e-13
genusOxalobacter-0.1743.37e-141.46e-13
speciesOxalobacter_formigenes-0.1743.37e-141.46e-13
familyOxalobacteraceae-0.1743.74e-141.6e-13
speciesRuminococcus_champanellensis-0.1743.99e-141.7e-13
speciesStreptococcus_thermophilus-0.1734.36e-141.84e-13
speciesClostridium_hathewayi0.1735.27e-142.2e-13
speciesClostridium_sp_L2_50-0.1735.57e-142.31e-13
genusEggerthella0.1726e-142.46e-13
speciesCoprococcus_sp_ART55_1-0.1718.32e-143.39e-13
speciesBacteroides_nordii0.1692.01e-138.11e-13
speciesCoprococcus_eutactus-0.1692.13e-138.52e-13
speciesAnaerotruncus_colihominis0.1664.91e-131.95e-12
speciesParaprevotella_unclassified-0.1641.03e-124.05e-12
speciesClostridium_clostridioforme0.1641.13e-124.41e-12
speciesDesulfovibrio_piger-0.1631.18e-124.57e-12
genusParaprevotella-0.1631.51e-125.79e-12
genusClostridiales_noname0.1621.65e-126.28e-12
speciesMitsuokella_multacida-0.1621.67e-126.31e-12
speciesStreptococcus_parasanguinis-0.1595.22e-121.95e-11
speciesRuminococcus_sp_5_1_39BFAA-0.1595.25e-121.95e-11
familyOscillospiraceae0.1595.4e-121.98e-11
genusOscillibacter0.1595.4e-121.98e-11
speciesLachnospiraceae_bacterium_3_1_46FAA-0.1585.66e-122.06e-11
genusAdlercreutzia-0.1577.73e-122.76e-11
speciesAdlercreutzia_equolifaciens-0.1577.73e-122.76e-11
familyStreptococcaceae-0.1561.3e-114.61e-11
speciesErysipelotrichaceae_bacterium_21_3-0.1561.34e-114.72e-11
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1551.81e-116.33e-11
speciesBacteroides_pectinophilus-0.1542.05e-117.11e-11
speciesBilophila_wadsworthia0.1532.57e-118.85e-11
speciesClostridium_leptum-0.1515.88e-112.01e-10
genusAnaerotruncus-0.156.52e-112.21e-10
speciesParabacteroides_distasonis0.1498.62e-112.91e-10
genusBurkholderiales_noname0.1499.9e-113.29e-10
speciesBurkholderiales_bacterium_1_1_470.1499.9e-113.29e-10
genusStreptococcus-0.1481.17e-103.86e-10
phylumViruses_noname-0.1481.23e-104e-10
classViruses_noname-0.1481.23e-104e-10
familyBurkholderiales_noname0.1481.24e-104.01e-10
speciesParaprevotella_clara-0.1471.48e-104.75e-10
speciesBifidobacterium_longum-0.1471.54e-104.91e-10
speciesLachnospiraceae_bacterium_6_1_63FAA0.1462.38e-107.54e-10
genusDesulfovibrio-0.1452.68e-108.43e-10
genusAnaerostipes-0.1443.7e-101.16e-09
speciesStreptococcus_mutans-0.1443.96e-101.23e-09
genusRoseburia0.1435.91e-101.82e-09
speciesBacteroides_dorei0.1426.64e-102.04e-09
speciesCoprobacillus_unclassified0.141.12e-093.41e-09
genusPseudoflavonifractor-0.1391.43e-094.3e-09
speciesPseudoflavonifractor_capillosus-0.1391.43e-094.3e-09
speciesOscillibacter_unclassified0.1391.53e-094.57e-09
genusClostridiaceae_noname0.1391.8e-095.31e-09
speciesClostridiaceae_bacterium_JC1180.1391.8e-095.31e-09
speciesLactobacillus_rhamnosus-0.1381.97e-095.78e-09
genusBarnesiella-0.1372.84e-098.22e-09
speciesBarnesiella_intestinihominis-0.1372.84e-098.22e-09
speciesDialister_succinatiphilus-0.1355.17e-091.48e-08
speciesLachnospiraceae_bacterium_2_1_58FAA0.1355.18e-091.48e-08
speciesParaprevotella_xylaniphila-0.1338.31e-092.36e-08
speciesBifidobacterium_catenulatum-0.1329.05e-092.56e-08
familyBacillales_noname-0.1329.48e-092.65e-08
genusGemella-0.1329.48e-092.65e-08
orderBurkholderiales0.1321.1e-083.05e-08
speciesCollinsella_intestinalis0.1321.12e-083.09e-08
speciesLachnospiraceae_bacterium_2_1_46FAA0.1321.14e-083.13e-08
speciesBacteroides_caccae0.1311.18e-083.22e-08
genusParasutterella0.1311.33e-083.59e-08
speciesParasutterella_excrementihominis0.1311.33e-083.59e-08
familySiphoviridae-0.1311.45e-083.89e-08
classBetaproteobacteria0.131.49e-083.97e-08
speciesFusobacterium_ulcerans0.131.76e-084.67e-08
speciesFusobacterium_varium0.131.85e-084.88e-08
speciesRoseburia_inulinivorans0.1292.36e-086.19e-08
speciesStreptococcus_salivarius-0.1273.29e-088.58e-08
genusRuminococcus-0.1264.35e-081.13e-07
speciesLactobacillus_casei_paracasei-0.1247.39e-081.91e-07
speciesRoseburia_hominis-0.121.86e-074.77e-07
speciesBifidobacterium_dentium-0.122.02e-075.15e-07
genusSiphoviridae_noname-0.122.09e-075.3e-07
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genusRothia-0.0982.31e-054.52e-05
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speciesOscillibacter_sp_KLE_17280.0972.63e-055.11e-05
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speciesRothia_mucilaginosa-0.0918.57e-050.000161
speciesOscillibacter_sp_KLE_17450.0918.74e-050.000163
genusSutterella-0.090.0001060.000197
genusRuminococcaceae_noname-0.0880.0001380.000254
speciesRuminococcaceae_bacterium_D16-0.0880.0001380.000254
speciesLactobacillus_delbrueckii-0.0880.0001440.000264
speciesParvimonas_unclassified-0.0850.0002270.000415
genusParvimonas-0.0850.0002280.000416
speciesVeillonella_dispar0.0850.000240.000436
genusLeuconostoc-0.0830.000310.000561
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genusPeptostreptococcus-0.0820.0003910.000702
familyClostridiales_Family_XI_Incertae_Sedis-0.0820.0004050.000721
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speciesPeptostreptococcus_stomatis-0.0810.0004490.000794
genusClostridium0.0810.0004760.000835
speciesBacteroides_clarus0.0810.0004760.000835
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speciesCollinsella_unclassified0.0770.0008520.00148
speciesSutterella_parvirubra0.0770.000860.00149
genusBlautia-0.0760.0009490.00163
familyPropionibacteriaceae-0.0750.001210.00208
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speciesLachnospiraceae_bacterium_5_1_57FAA0.0740.001420.00242
speciesOdoribacter_splanchnicus0.0730.001550.00263
genusPyramidobacter0.0730.001560.00263
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speciesVeillonella_parvula0.0730.001570.00264
speciesKlebsiella_pneumoniae0.0730.001590.00266
genusDialister-0.0730.001610.00269
familyEubacteriaceae-0.0730.001690.00281
genusEubacterium-0.0720.00180.00298
speciesDorea_unclassified0.0720.001890.00312
genusCoprobacter-0.0710.002120.00347
speciesCoprobacter_fastidiosus-0.0710.002120.00347
speciesParabacteroides_merdae0.0710.002180.00356
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speciesAlistipes_onderdonkii0.070.002290.00371
speciesParabacteroides_sp_D13-0.070.002390.00386
speciesRuminococcus_torques-0.070.00240.00387
speciesBacteroides_sp_3_1_190.070.002440.00392
speciesRoseburia_intestinalis0.070.002490.00398
speciesPeptostreptococcaceae_noname_unclassified-0.070.002550.00407
speciesTuricibacter_sanguinis-0.0690.002790.00442
speciesBacteroides_cellulosilyticus0.0690.002790.00442
speciesC2likevirus_unclassified-0.0690.002910.00459
genusC2likevirus-0.0680.003330.00524
phylumProteobacteria0.0680.003450.00541
genusVeillonella0.0670.003540.00553
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speciesLachnospiraceae_bacterium_5_1_63FAA-0.0640.005350.00825
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genusTuricibacter-0.0630.006050.00927
speciesPrevotella_buccae0.0630.006190.00946
speciesHoldemania_sp_AP20.0630.006450.00982
genusLachnospiraceae_noname-0.0630.006560.00996
genusAcidaminococcus-0.0630.006750.0102
phylumSynergistetes0.0620.00750.0112
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familySynergistaceae0.0620.00750.0112
speciesDesulfovibrio_desulfuricans-0.0620.00770.0115
speciesBacteroides_barnesiae-0.060.009520.0141
genusOdoribacter0.060.009930.0147
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speciesLactobacillus_plantarum-0.0590.0110.0161
speciesStreptococcus_mitis_oralis_pneumoniae-0.0590.0110.0161
speciesClostridium_ramosum0.0590.01140.0167
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speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0580.0120.0174
speciesLachnospiraceae_bacterium_1_1_57FAA0.0580.01250.0181
speciesOdoribacter_unclassified-0.0580.01260.0182
speciesGemella_morbillorum-0.0570.01320.019
speciesMegamonas_hypermegale0.0570.01330.0191
genusPorphyromonas-0.0570.01380.0197
familyViruses_noname-0.0560.01460.0208
genusViruses_noname-0.0560.01460.0208
speciesLactobacillus_vaginalis-0.0560.01580.0224
speciesBifidobacterium_breve-0.0560.01620.0229
speciesTuricibacter_unclassified-0.0550.01730.0244
speciesParabacteroides_goldsteinii0.0550.01790.0251
speciesLactococcus_phage_phi7-0.0540.02020.0283
speciesStreptococcus_pasteurianus0.0530.02140.0299
speciesPorphyromonas_asaccharolytica-0.0520.02340.0326
speciesVeillonella_unclassified0.0520.02360.0328
speciesLactobacillus_mucosae-0.0520.02430.0336
speciesLactobacillus_amylovorus-0.0520.02490.0344
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0520.02590.0356
speciesLactococcus_phage_jm2-0.0510.0270.037
speciesEnterococcus_faecium-0.0510.02830.0387
speciesLactobacillus_fermentum-0.0510.02880.0393
speciesMegasphaera_micronuciformis0.050.02920.0397
speciesEggerthella_sp_1_3_56FAA-0.050.03070.0416
speciesLactobacillus_crispatus-0.050.03130.0423
speciesMegamonas_funiformis0.050.03170.0427
speciesStreptococcus_australis-0.0490.03460.0465
speciesVeillonella_atypica0.0490.03540.0475
speciesEubacterium_eligens-0.0480.03780.0505
speciesKlebsiella_oxytoca-0.0470.04270.0569
speciesLactobacillus_oris-0.0470.04310.0573
genusGordonibacter-0.0450.05160.0682
speciesGordonibacter_pamelaeae-0.0450.05160.0682
speciesLactobacillus_reuteri-0.0450.05190.0684
speciesRuminococcus_bromii-0.0440.05870.0772
speciesEggerthella_lenta0.0430.06310.0827
genusSlackia-0.0430.06440.0842
speciesBlautia_producta0.0430.06510.0849
speciesPorphyromonas_uenonis-0.0410.07570.0984
speciesMegasphaera_unclassified-0.040.080.104
genusSuccinatimonas-0.0390.09080.117
speciesSuccinatimonas_hippei-0.0390.09080.117
speciesCoprobacillus_sp_29_1-0.0390.0930.12
familySuccinivibrionaceae-0.0390.09370.12
speciesHaemophilus_sputorum0.0390.09470.121
speciesBacteroides_salanitronis-0.0380.1040.132
speciesEubacterium_ventriosum-0.0380.1040.132
speciesBacteroides_fluxus0.0370.1120.142
speciesAlistipes_putredinis0.0360.1180.149
speciesEnterobacteria_phage_HK5440.0360.1190.15
speciesPrevotella_bivia0.0360.1210.152
speciesPeptostreptococcus_anaerobius-0.0350.1270.159
familyMyoviridae0.0350.1340.167
genusProteus-0.0350.1340.167
speciesAlistipes_finegoldii0.0350.1340.167
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0340.1380.171
speciesBacteroides_sp_4_3_47FAA0.0330.1480.183
genusPantoea-0.0330.1490.184
speciesPantoea_unclassified-0.0330.1490.184
genusActinobacillus0.0330.1550.19
speciesActinobacillus_unclassified0.0330.1550.19
speciesLactococcus_garvieae-0.0320.1620.198
speciesBacteroides_eggerthii-0.0320.1660.202
genusFaecalibacterium-0.0310.1750.212
speciesFaecalibacterium_prausnitzii-0.0310.1750.212
speciesEubacterium_rectale-0.0310.1770.214
speciesCollinsella_tanakaei0.030.1890.228
speciesStreptococcus_phage_Sfi21-0.030.1940.233
speciesHoldemania_unclassified0.030.1940.233
genusCoriobacteriaceae_noname0.030.1980.237
speciesBlautia_hydrogenotrophica0.0290.2060.246
speciesCoriobacteriaceae_bacterium_phI0.0290.2070.247
speciesKlebsiella_unclassified0.0280.2230.265
speciesEscherichia_coli0.0280.2240.266
speciesSlackia_piriformis-0.0270.2360.279
orderAeromonadales-0.0270.2420.286
speciesProteus_mirabilis-0.0270.2480.292
genusAcidaminococcaceae_unclassified-0.0260.260.305
genusButyricimonas0.0260.2670.311
speciesButyricimonas_synergistica0.0260.2670.311
speciesAcidaminococcus_unclassified-0.0260.2670.311
speciesWeissella_cibaria-0.0250.2780.323
speciesErysipelotrichaceae_bacterium_6_1_45-0.0240.3010.349
speciesClostridium_spiroforme-0.0230.3190.369
speciesEscherichia_unclassified-0.0230.3240.374
speciesLactococcus_phage_936_sensu_lato-0.0230.3270.376
genusEscherichia0.0230.330.379
classGammaproteobacteria0.0220.3330.381
speciesHoldemania_filiformis0.0220.3390.387
genusLambdalikevirus-0.0220.3510.4
speciesHaemophilus_paraphrohaemolyticus0.0220.3520.4
familyVeillonellaceae-0.020.3790.43
genusAggregatibacter0.020.3870.438
speciesEubacterium_limosum-0.020.3880.438
genusMyoviridae_noname0.020.3910.44
speciesAcidaminococcus_intestini-0.020.3930.442
genusPeptoniphilus-0.0190.4010.45
genusEnterobacter0.0190.4050.453
speciesEnterobacter_aerogenes0.0190.4080.455
speciesClostridium_perfringens0.0190.4240.472
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0180.4280.475
speciesCitrobacter_unclassified0.0170.4520.501
speciesAlistipes_sp_AP11-0.0160.4840.535
genusMegasphaera-0.0160.4960.546
orderEnterobacteriales0.0160.4970.546
familyEnterobacteriaceae0.0160.4970.546
speciesCampylobacter_concisus0.0160.5010.549
speciesAlistipes_sp_HGB5-0.0150.5210.569
speciesEnterobacter_cloacae0.0140.5540.604
speciesAlistipes_unclassified-0.0130.5620.611
speciesLactobacillus_acidophilus-0.0130.5710.62
genusWeissella-0.0120.590.639
speciesClostridium_sp_KLE_17550.0120.6010.649
speciesLactobacillus_salivarius0.0120.6080.655
speciesCoprobacillus_sp_D6-0.0110.6250.672
genusCampylobacter0.0110.6420.689
speciesLeuconostoc_lactis0.010.6550.701
speciesBacteroides_faecis-0.010.6580.703
speciesStreptococcus_infantarius0.010.680.725
genusCitrobacter0.0090.7010.745
speciesAggregatibacter_segnis0.0090.710.753
speciesFusobacterium_nucleatum-0.0080.7230.765
speciesKlebsiella_sp_MS_92_30.0060.7790.823
speciesAlistipes_shahii0.0060.7930.835
speciesPrevotella_stercorea-0.0060.7940.835
genusTunalikevirus-0.0060.7960.835
familyCampylobacteraceae0.0060.8030.84
speciesDialister_invisus-0.0050.8120.848
speciesWeissella_confusa-0.0050.8310.866
speciesLactobacillus_sanfranciscensis-0.0040.8520.886
genusSutterellaceae_unclassified-0.0040.8540.886
familyPodoviridae-0.0040.8770.908
speciesBacteroides_sp_1_1_60.0030.9060.936
genusStaphylococcus-0.0030.9110.938
speciesBacteroides_coprocola0.0030.9120.938
speciesStreptococcus_lutetiensis-0.0020.920.944
speciesKlebsiella_phage_KP360.0020.9240.946
speciesParabacteroides_sp_20_3-0.0020.9340.953
speciesLactococcus_phage_bIL670.0020.9350.953
familyStaphylococcaceae-0.0020.9390.955
classEpsilonproteobacteria-0.0010.9580.97
orderCampylobacterales-0.0010.9580.97
speciesCitrobacter_freundii0.0010.9630.973
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0010.9750.983
genusButyricicoccus0.00.9870.991
speciesButyricicoccus_pullicaecorum0.00.9870.991
genusMorganella0.00.9910.991
speciesMorganella_morganii0.00.9910.991
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.2901222498910.21310252130.00504699383651677522.527
Liver cirrhosisChina1201140.2822142697870.307908928340.07865882119871575152.9107
Ulcerative colitisSpain78660.185393270890.21310252130.103975106457724023.8834
Type II diabetesDenmark752770.1867277694610.1720508336520.2419642067251419546.5303
ObesityDenmark1691230.1769813287650.163389284530.3240237387641469048.3049
Colorectal cancerAustria64350.1269621836090.1393230676840.418643321471545552.2906
Type II diabetesSweden53920.1585537792280.15233725180.486332340161582553.5896
Rheumatoid arthritisChina127980.2385128249650.2333611231810.5307418854811832561.1098
Type II diabetesChina1831850.2750135122590.2763583095870.7751605171692616386.4635
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382