MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 09:57:41 PST
Job id & description: 2383, purine3
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0077_GL00192572941209CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0071_GL00260492957565CompleteK05810COG1496FirmicutesBlautia100.0100.0100.0
O2.UC23-2_GL01456292965008CompleteK05810COG1496FirmicutesBlautia100.0100.0100.0
O2.UC6-0_GL00068792949693CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0264_GL01088332944518CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0088_GL00222092941355CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC15-1_GL01364632948633CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD17-0_GL00541522998680CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0006_GL01135852940122CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0011_GL00996402940291CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0138_GL00259262942300CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0143_GL00571402942406CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0187_GL00622992943033CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0198_GL00305192943428CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0284_GL01177932944891CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0402_GL00708142946993CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
N087A_GL01097622953543CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
O2.CD2-0-PT_GL00941372964544CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
O2.UC49-0_GL00602522981862Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
765094712-stool1_revised2955897CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
DOM022_GL00758122952847CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0004_GL00087162940045CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0069_GL00913152941160CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0091_GL00329442941424CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0093_GL00745352941463CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0126_GL01173912942092CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
N085A_GL00645382953536CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
NLF002_GL00298182969069CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
O2.UC1-1_GL00686472948514CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
O2.UC31-1_GL00739072949022CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
T2D-105A_GL01425062953765CompleteK00757COG2820unknownunknown100.0100.0100.0
T2D-163A_GL00038782954061Lack 5'-endK00777NOG09378unknownunknown100.0100.0100.0
T2D-48A_GL00539122954283CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
V1.UC12-4_GL00102002951506CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
DOM005_GL00360462952756CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0037_GL00116342940698CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0152_GL00598142942621CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0195_GL01710052943350CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0243_GL00235872944078CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0267_GL01880202944562CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
MH0414_GL00632862947237CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
O2.UC8-0_GL01077982949755CompleteK00757COG2820unknownunknown100.0100.0100.0
158337416-stool1_revised2954778CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
764588959-stool1_revised2955837CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0012_GL02010732940406CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0053_GL00149122989755CompleteK05810COG1496BacteroidetesPrevotella100.0100.0100.0
MH0130_GL00691582991001CompleteK05810COG1496BacteroidetesPrevotella100.0100.0100.0
MH0152_GL00241512942612CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0274_GL01133452944668CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0298_GL00068752977360CompleteK00757COG2820unknownunknown100.0100.0100.0
NOF010_GL00661822953062CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
V1.CD38-0_GL01455612950326CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
V1.UC63-0_GL02422662968658CompleteK03783COG0005FirmicutesRuminococcus100.0100.0100.0
MH0014_GL00605053005680CompleteK05810COG1496FirmicutesBlautia100.0100.0100.0
MH0051_GL00478322940875CompleteK00757COG2820BacteroidetesAlistipes100.0100.0100.0
MH0055_GL00746652940983CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0211_GL00792463008643CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
MH0243_GL00269882944079CompleteK00757COG2820BacteroidetesAlistipes100.0100.0100.0
MH0327_GL00800703010326CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
O2.UC11-1_GL01869522964660CompleteK05810COG1496FirmicutesAcidaminococcus100.0100.0100.0
T2D-135A_GL00253242953957CompleteK00757COG2820BacteroidetesBacteroides100.0100.0100.0
556269.OFBG_016692988709CompleteK00772COG0005ProteobacteriaOxalobacter100.0100.0100.0
MH0006_GL00596282940096CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0006_GL00778152956631CompleteK00757COG2820BacteroidetesAlistipes100.0100.0100.0
MH0006_GL01462802940137CompleteK00757COG2820BacteroidetesCapnocytophaga100.0100.0100.0
MH0057_GL00313402941004CompleteK00757COG2820BacteroidetesParaprevotella100.0100.0100.0
MH0092_GL01348212941449CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0192_GL00025222943249CompleteK00757COG2820BacteroidetesAlistipes100.0100.0100.0
MH0222_GL00343842943770CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0274_GL01436463009592CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
MH0426_GL01068822963729CompleteK05810COG1496unknownunknown100.0100.0100.0
NOF013_GL00229952953074CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
O2.UC20-2_GL00767002948760CompleteK00757COG2820BacteroidetesAlistipes100.0100.0100.0
V1.UC41-0_GL00115002952018CompleteK00757COG2820unknownunknown100.0100.0100.0
HT25A_GL00287093003389CompleteK05810COG1496FirmicutesBlautia100.0100.0100.0
MH0198_GL00221793008447CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0412_GL00473792995988CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-22A_GL00626312954129CompleteK00757COG2820BacteroidetesAlistipes100.0100.0100.0
MH0083_GL00200362941271CompleteK00757COG2820BacteroidetesAlistipes100.0100.0100.0
866771.HMPREF9296_20852988786CompleteK00757COG2820BacteroidetesPrevotella100.0100.0100.0
MH0088_GL00800262973856CompleteK03783COG0005FirmicutesBlautia100.0100.0100.0
MH0177_GL00844462959230CompleteK00757COG2820Bacteroidetesunknown100.0100.0100.0
O2.UC15-0_GL00399372980906CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-122A_GL00192073002653CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI24_GL00956942983608CompleteK05810COG1496FirmicutesRoseburia100.0100.0100.0
MH0006_GL00401382988996CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0087_GL00028082990144CompleteK05810COG1496FirmicutesBlautia100.0100.0100.0
T2D-8A_GL00178093003279CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0012_GL01690372989295CompleteK00772COG0005FirmicutesMitsuokella100.0100.0100.0
MH0369_GL00581712962459Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0433_GL00076582947646CompleteK00757COG2820BacteroidetesAlistipes100.0100.0100.0
O2.UC38-1_GL01593712997911Lack 5'-endK03783COG0005FirmicutesRoseburia100.0100.0100.0
MH0065_GL00228672973580CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0138_GL00315002991131CompleteK00772COG0005FirmicutesMitsuokella100.0100.0100.0
MH0448_GL00232422996762CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0275_GL00180592993490CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0276_GL01019493009633Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0390_GL01429992995569CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0079_GL00438983006352CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0292_GL00075762944956CompleteK05810COG1496unknownunknown100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesAlistipes_putredinis0.3933.67e-701.73e-67
familyRikenellaceae0.3573.01e-574.74e-55
genusAlistipes0.3573.01e-574.74e-55
speciesAlistipes_shahii0.2642.71e-313.2e-29
speciesBacteroides_eggerthii0.2391.05e-259.91e-24
speciesOdoribacter_splanchnicus0.2241.31e-221.03e-20
genusOdoribacter0.2199.88e-226.66e-20
phylumBacteroidetes0.2147.14e-213.4e-19
classBacteroidia0.2147.21e-213.4e-19
orderBacteroidales0.2147.21e-213.4e-19
familyBacteroidaceae0.213.81e-201.5e-18
genusBacteroides0.213.81e-201.5e-18
familyPorphyromonadaceae0.1961.27e-174.61e-16
familyOscillospiraceae0.1933.33e-171.05e-15
genusOscillibacter0.1933.33e-171.05e-15
speciesOscillibacter_unclassified0.1865.22e-161.54e-14
speciesAlistipes_finegoldii0.1857.83e-162.17e-14
genusParabacteroides0.1841.25e-153.28e-14
classDeltaproteobacteria0.1752.39e-145.37e-13
orderDesulfovibrionales0.1752.39e-145.37e-13
familyDesulfovibrionaceae0.1752.39e-145.37e-13
speciesBacteroides_salyersiae0.1682.73e-135.86e-12
familyRuminococcaceae-0.1683.02e-136.2e-12
speciesBacteroides_finegoldii0.1656.66e-131.31e-11
speciesBilophila_unclassified0.1631.18e-122.23e-11
genusBilophila0.1631.25e-122.27e-11
genusFlavonifractor0.1631.55e-122.61e-11
speciesFlavonifractor_plautii0.1631.55e-122.61e-11
speciesBacteroides_nordii0.1587.35e-121.2e-10
phylumFirmicutes-0.1561.09e-111.71e-10
speciesBacteroides_clarus0.1551.64e-112.5e-10
genusBifidobacterium-0.1515.31e-117.83e-10
orderBifidobacteriales-0.156.23e-118.65e-10
familyBifidobacteriaceae-0.156.23e-118.65e-10
speciesBacteroides_xylanisolvens0.1462.43e-103.28e-09
phylumActinobacteria-0.1443.62e-104.62e-09
classActinobacteria-0.1443.62e-104.62e-09
speciesParabacteroides_goldsteinii0.1443.87e-104.81e-09
speciesBilophila_wadsworthia0.1427.21e-108.73e-09
speciesAlistipes_unclassified-0.1382.09e-092.47e-08
speciesParabacteroides_merdae0.1354.59e-095.28e-08
speciesClostridium_citroniae0.1345.94e-096.68e-08
speciesBacteroides_vulgatus0.1329.39e-091.03e-07
speciesParabacteroides_johnsonii0.1321.09e-081.17e-07
speciesCoprococcus_catus-0.1321.13e-081.19e-07
speciesBacteroides_cellulosilyticus0.1311.2e-081.23e-07
speciesClostridium_asparagiforme0.131.57e-081.58e-07
genusOlsenella-0.131.91e-081.88e-07
speciesLactobacillus_mucosae-0.1292.11e-082.03e-07
speciesBifidobacterium_longum-0.1292.22e-082.07e-07
speciesRoseburia_intestinalis0.1292.24e-082.07e-07
genusButyricimonas0.1264.87e-084.34e-07
speciesButyricimonas_synergistica0.1264.87e-084.34e-07
speciesBacteroides_thetaiotaomicron0.1255.98e-085.23e-07
speciesOlsenella_unclassified-0.1256.32e-085.42e-07
familyLactobacillaceae-0.1247.24e-086.1e-07
genusLactobacillus-0.1248.41e-086.96e-07
speciesEubacterium_hallii-0.1239.48e-087.71e-07
speciesBacteroides_stercoris0.122.15e-071.72e-06
speciesBifidobacterium_adolescentis-0.1192.72e-072.14e-06
speciesLachnospiraceae_bacterium_1_1_57FAA0.1183.1e-072.4e-06
speciesBacteroides_caccae0.1183.23e-072.46e-06
speciesAlistipes_sp_AP110.1173.9e-072.92e-06
genusDorea-0.1164.45e-073.28e-06
classBacilli-0.1164.72e-073.43e-06
orderLactobacillales-0.1155.91e-074.23e-06
speciesAnaerotruncus_colihominis0.1156.14e-074.33e-06
classClostridia-0.1147.86e-075.38e-06
orderClostridiales-0.1147.86e-075.38e-06
speciesMethanobrevibacter_smithii-0.1148.5e-075.73e-06
speciesBacteroides_uniformis0.1138.99e-075.98e-06
speciesRuminococcus_torques0.1121.1e-067.21e-06
speciesDorea_longicatena-0.1111.35e-068.73e-06
speciesAnaerostipes_hadrus-0.1111.62e-061.03e-05
genusMethanobrevibacter-0.111.93e-061.21e-05
phylumEuryarchaeota-0.112.04e-061.27e-05
genusAnaerostipes-0.1092.47e-061.51e-05
classMethanobacteria-0.1082.79e-061.65e-05
orderMethanobacteriales-0.1082.79e-061.65e-05
familyMethanobacteriaceae-0.1082.79e-061.65e-05
speciesBifidobacterium_bifidum-0.1082.9e-061.69e-05
speciesRuminococcus_gnavus0.1083.05e-061.76e-05
speciesCitrobacter_freundii0.1073.45e-061.96e-05
speciesAlistipes_onderdonkii0.1064.05e-062.28e-05
genusParasutterella0.1064.22e-062.32e-05
speciesParasutterella_excrementihominis0.1064.22e-062.32e-05
familyBacteroidales_noname0.1055.32e-062.82e-05
genusBacteroidales_noname0.1055.32e-062.82e-05
speciesBacteroidales_bacterium_ph80.1055.32e-062.82e-05
familyClostridiales_noname0.1055.46e-062.86e-05
speciesBacteroides_massiliensis0.1046.14e-063.18e-05
speciesClostridium_bolteae0.1021.02e-055.23e-05
speciesAlistipes_indistinctus0.1011.22e-056.19e-05
speciesCollinsella_aerofaciens-0.1011.25e-056.28e-05
genusDialister-0.11.4e-056.96e-05
genusBurkholderiales_noname0.0991.65e-058.03e-05
speciesBurkholderiales_bacterium_1_1_470.0991.65e-058.03e-05
genusCoprococcus-0.0991.85e-058.91e-05
familyActinomycetaceae-0.0991.94e-059.25e-05
speciesBacteroides_coprophilus0.0991.98e-059.35e-05
speciesClostridiales_bacterium_1_7_47FAA0.0982.27e-050.000106
genusHoldemania0.0972.48e-050.000114
familyBurkholderiales_noname0.0972.49e-050.000114
speciesCitrobacter_unclassified0.0972.91e-050.000132
speciesClostridium_sp_ATCC_BAA_4420.0963.05e-050.000137
speciesBacteroides_intestinalis0.0963.3e-050.000147
genusCitrobacter0.0963.49e-050.000154
genusActinomyces-0.0953.68e-050.000161
speciesPropionibacterium_freudenreichii-0.0944.27e-050.000185
speciesPrevotella_buccae-0.0944.36e-050.000187
genusDesulfovibrio0.0944.58e-050.000195
classBetaproteobacteria0.0944.76e-050.000201
orderBurkholderiales0.0935.39e-050.000225
speciesStreptococcus_thermophilus-0.0935.93e-050.000246
speciesHoldemania_filiformis0.0926.25e-050.000257
speciesDialister_invisus-0.0926.8e-050.000277
speciesDorea_formicigenerans-0.0918.44e-050.00034
genusLachnospiraceae_noname0.090.0001030.000412
speciesLachnospiraceae_bacterium_7_1_58FAA0.0890.0001120.000444
speciesLachnospiraceae_bacterium_1_4_56FAA0.0890.000120.000472
genusBlautia0.0890.0001220.000476
speciesCollinsella_intestinalis0.0860.0001860.00072
speciesEubacterium_dolichum0.0850.0002370.000909
speciesClostridium_hathewayi0.0840.0002660.00101
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0830.0003060.00116
speciesBifidobacterium_catenulatum-0.0830.0003150.00117
genusClostridiaceae_noname0.0830.0003160.00117
speciesClostridiaceae_bacterium_JC1180.0830.0003160.00117
genusStreptococcus-0.0820.0003660.00134
genusRoseburia0.0820.0003760.00137
orderActinomycetales-0.0820.0004060.00146
speciesAlistipes_senegalensis0.0810.0004270.00153
speciesTuricibacter_sanguinis-0.080.000510.00181
familyVeillonellaceae-0.080.0005180.00182
familyStreptococcaceae-0.080.0005250.00184
genusCollinsella-0.080.0005340.00185
genusBarnesiella0.080.0005470.00186
speciesBarnesiella_intestinihominis0.080.0005470.00186
speciesParabacteroides_distasonis0.080.0005480.00186
speciesStreptococcus_parasanguinis-0.080.0005690.00192
speciesBifidobacterium_breve-0.0790.0006590.0022
speciesSubdoligranulum_sp_4_3_54A2FAA0.0790.0006630.0022
speciesBlautia_producta0.0790.0006670.0022
speciesSubdoligranulum_unclassified-0.0780.0007160.00235
familySutterellaceae0.0780.0007570.00246
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0780.0007750.0025
speciesBacteroides_oleiciplenus0.0780.0007850.0025
speciesLactobacillus_fermentum-0.0780.0007850.0025
speciesBacteroides_ovatus0.0780.0007880.0025
speciesParaprevotella_xylaniphila0.0770.0008440.00266
speciesEubacterium_sp_3_1_310.0770.000890.00278
speciesLachnospiraceae_bacterium_6_1_63FAA0.0760.0009660.003
speciesStreptococcus_mutans-0.0760.001040.00321
speciesRuminococcus_obeum-0.0760.001070.00328
familyPeptostreptococcaceae-0.0750.001090.00329
genusAggregatibacter-0.0750.001090.00329
orderCoriobacteriales-0.0750.00110.00329
familyCoriobacteriaceae-0.0750.00110.00329
speciesPeptostreptococcaceae_noname_unclassified-0.0750.001210.00359
speciesStreptococcus_vestibularis-0.0740.001280.00378
speciesCoprococcus_comes-0.0740.001310.00384
genusRuminococcus-0.0740.001380.00402
genusSubdoligranulum-0.0740.001440.00417
genusMethanosphaera-0.0730.001520.00435
speciesMethanosphaera_stadtmanae-0.0730.001520.00435
speciesLactobacillus_salivarius-0.0730.001620.00461
genusPeptostreptococcaceae_noname-0.0730.00170.0048
speciesStreptococcus_anginosus-0.0720.001730.00486
genusButyrivibrio-0.0720.001870.00522
speciesFusobacterium_nucleatum-0.0710.001990.00549
genusActinobacillus-0.0710.0020.00549
speciesActinobacillus_unclassified-0.0710.0020.00549
speciesAggregatibacter_segnis-0.070.002290.00625
speciesStreptococcus_gordonii-0.070.002350.00637
speciesStreptococcus_salivarius-0.070.002530.00682
genusCoprobacter0.0690.002720.00725
speciesCoprobacter_fastidiosus0.0690.002720.00725
speciesBifidobacterium_animalis-0.0680.003420.00907
speciesClostridium_symbiosum0.0670.003590.00947
speciesRoseburia_unclassified-0.0660.004550.0119
classNegativicutes-0.0650.004610.012
orderSelenomonadales-0.0650.004610.012
speciesCoprococcus_sp_ART55_1-0.0650.004840.0124
speciesLachnospiraceae_bacterium_3_1_46FAA0.0650.004840.0124
speciesButyrivibrio_crossotus-0.0650.004950.0126
speciesMitsuokella_multacida0.0640.005370.0136
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0640.005390.0136
speciesBacteroides_faecis0.0640.005530.0139
speciesBacteroides_pectinophilus-0.0640.00560.014
genusParaprevotella0.0630.006320.0157
speciesClostridium_ramosum0.0630.006770.0167
speciesParaprevotella_unclassified0.0620.006980.0172
speciesClostridium_sp_L2_50-0.0620.007630.0187
genusClostridiales_noname0.0610.007830.0191
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0610.008540.0206
speciesDesulfovibrio_piger0.0610.008550.0206
genusPropionibacterium-0.0610.008610.0206
speciesDesulfovibrio_desulfuricans0.060.008920.0213
speciesBifidobacterium_dentium-0.060.009720.023
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speciesVeillonella_parvula-0.060.009890.0232
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speciesLactococcus_phage_936_sensu_lato-0.0590.01080.0247
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speciesCampylobacter_concisus-0.0580.01250.0281
speciesOdoribacter_unclassified-0.0570.01350.0302
genusTuricibacter-0.0570.01430.0318
speciesOscillibacter_sp_KLE_17450.0560.01630.0361
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speciesCollinsella_tanakaei0.0520.02330.048
speciesClostridium_sp_KLE_17550.0510.0260.0534
speciesMegamonas_rupellensis0.0510.02630.0537
speciesTuricibacter_unclassified-0.0510.02820.0574
speciesBacteroides_sp_2_1_220.050.02910.0589
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speciesFaecalibacterium_prausnitzii-0.050.03010.0602
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speciesVeillonella_dispar-0.0490.03450.0681
speciesLactobacillus_casei_paracasei-0.0490.0350.0688
speciesBacteroides_sp_4_3_47FAA0.0480.03790.0742
speciesRuminococcus_bromii-0.0480.03890.0759
speciesCoprococcus_eutactus-0.0480.03950.0767
speciesCoprobacillus_unclassified0.0470.040.0774
familyOxalobacteraceae0.0470.04030.0776
genusHaemophilus-0.0470.04410.0846
speciesCoriobacteriaceae_bacterium_phI0.0460.04490.0858
speciesLactobacillus_ruminis-0.0460.04580.0872
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speciesVeillonella_unclassified-0.0450.04990.0935
genusOxalobacter0.0450.05210.0968
speciesOxalobacter_formigenes0.0450.05210.0968
speciesFusobacterium_varium0.0450.05330.0987
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genusCoprobacillus0.0440.05910.108
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speciesBlautia_hydrogenotrophica0.0430.06050.11
speciesEnterobacteria_phage_HK5440.0430.06090.11
genusCoriobacteriaceae_noname0.0430.06430.116
speciesPrevotella_bivia0.0430.06570.118
speciesLactobacillus_gasseri-0.0420.06930.124
speciesErysipelotrichaceae_bacterium_3_1_530.0410.07850.14
speciesHaemophilus_sputorum-0.040.08240.146
speciesVeillonella_atypica-0.040.0830.147
speciesMegamonas_hypermegale0.040.0870.153
speciesBifidobacterium_angulatum-0.040.08710.153
speciesCollinsella_unclassified0.0390.0890.156
orderBacillales-0.0390.09070.158
genusSutterellaceae_unclassified0.0390.09080.158
familyLachnospiraceae0.0390.09480.164
genusEggerthella0.0390.09560.164
speciesEggerthella_unclassified0.0390.09570.164
speciesAcidaminococcus_intestini0.0380.09910.169
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0380.1030.175
speciesAnaerotruncus_unclassified-0.0380.1030.175
familyCampylobacteraceae-0.0380.1050.178
familyBacillales_noname-0.0370.1070.18
genusGemella-0.0370.1070.18
speciesMegasphaera_unclassified0.0370.1120.187
genusCampylobacter-0.0370.1140.19
speciesLachnospiraceae_bacterium_2_1_58FAA0.0360.1220.203
speciesPeptostreptococcus_stomatis-0.0360.1230.203
speciesEubacterium_biforme-0.0360.1230.203
phylumViruses_noname-0.0360.1250.205
classViruses_noname-0.0360.1250.205
speciesErysipelotrichaceae_bacterium_6_1_450.0350.1280.209
genusMyoviridae_noname0.0350.1290.21
speciesLactobacillus_oris-0.0350.1330.216
speciesEubacterium_rectale-0.0350.1340.217
genusPantoea0.0350.1360.218
speciesPantoea_unclassified0.0350.1360.218
speciesClostridium_leptum0.0340.1380.221
familyAcidaminococcaceae0.0340.140.222
classEpsilonproteobacteria-0.0340.1410.222
orderCampylobacterales-0.0340.1410.222
genusRuminococcaceae_noname0.0340.1410.222
speciesRuminococcaceae_bacterium_D160.0340.1410.222
speciesBacteroides_sp_1_1_60.0340.1440.226
speciesRothia_mucilaginosa-0.0340.1460.228
genusAcidaminococcus0.0330.1520.237
speciesLeuconostoc_lactis0.0330.1540.238
speciesMitsuokella_unclassified-0.0330.1540.238
genusCatenibacterium-0.0320.160.245
speciesCatenibacterium_mitsuokai-0.0320.160.245
speciesRuminococcus_lactaris-0.0320.160.245
genusMitsuokella-0.0320.1620.247
speciesLactococcus_phage_phi7-0.0320.1650.251
genusLambdalikevirus0.0320.170.258
familyMicrococcaceae-0.0320.1710.259
speciesRoseburia_inulinivorans0.0310.1750.264
genusSuccinatimonas0.0310.1780.265
genusRothia-0.0310.1780.265
speciesSuccinatimonas_hippei0.0310.1780.265
speciesBacteroides_plebeius0.0310.1780.265
speciesPrevotella_stercorea-0.0310.1820.27
genusMegamonas0.0310.1830.271
classGammaproteobacteria-0.0310.1850.273
speciesMegamonas_unclassified0.0310.1860.273
speciesLactococcus_phage_bIL670.030.1910.28
speciesFusobacterium_ulcerans-0.030.1940.283
familySuccinivibrionaceae0.030.1990.29
speciesButyrivibrio_unclassified-0.0290.2020.293
phylumProteobacteria0.0290.2030.294
speciesBacteroides_dorei0.0290.2050.296
speciesSutterella_wadsworthensis-0.0290.210.302
speciesLactobacillus_acidophilus-0.0290.2110.303
speciesPrevotella_copri-0.0280.2230.319
speciesHoldemania_sp_AP20.0270.2350.335
genusPyramidobacter0.0270.2360.335
speciesPyramidobacter_piscolens0.0270.2360.335
speciesDorea_unclassified-0.0260.2560.362
genusPeptostreptococcus-0.0260.260.366
speciesSlackia_piriformis0.0250.2730.384
speciesLactococcus_phage_P680-0.0250.2760.385
speciesDialister_succinatiphilus-0.0250.2760.385
speciesHaemophilus_paraphrohaemolyticus-0.0250.2850.396
speciesStreptococcus_australis-0.0250.2850.396
genusPhascolarctobacterium0.0240.2920.403
speciesPhascolarctobacterium_succinatutens0.0240.2920.403
genusAnaerotruncus0.0240.2950.406
genusSutterella-0.0240.3020.414
speciesProteus_mirabilis0.0240.3030.414
speciesLactobacillus_amylovorus-0.0240.3040.414
speciesRuminococcus_sp_JC304-0.0240.3040.414
speciesWeissella_cibaria0.0240.3090.419
speciesEscherichia_unclassified0.0230.3120.422
classErysipelotrichia-0.0230.3160.424
orderErysipelotrichales-0.0230.3160.424
familyErysipelotrichaceae-0.0230.3160.424
speciesAlistipes_sp_HGB50.0220.3380.452
speciesAcidaminococcus_fermentans0.0220.3440.459
speciesLactococcus_phage_jm2-0.0210.3530.469
speciesPorphyromonas_uenonis-0.0210.3540.469
familyStaphylococcaceae0.0210.3580.473
genusProteus0.0210.3590.473
speciesEubacterium_siraeum-0.0210.370.486
speciesFusobacterium_mortiferum0.020.3840.503
speciesC2likevirus_unclassified-0.020.3870.506
speciesKlebsiella_unclassified0.020.3880.506
speciesAnaerostipes_unclassified0.020.390.507
speciesStreptococcus_mitis_oralis_pneumoniae-0.0190.4070.528
speciesPeptostreptococcus_anaerobius0.0190.4090.529
genusErysipelotrichaceae_noname-0.0190.4130.533
genusWeissella0.0180.4280.55
speciesOdoribacter_laneus-0.0180.4310.552
speciesAcidaminococcus_unclassified0.0180.4330.552
speciesKlebsiella_oxytoca-0.0180.4360.552
phylumSynergistetes0.0180.4370.552
classSynergistia0.0180.4370.552
orderSynergistales0.0180.4370.552
familySynergistaceae0.0180.4370.552
speciesSutterella_parvirubra0.0180.4390.553
genusC2likevirus-0.0180.4430.556
familyLeuconostocaceae-0.0180.4470.56
familyEnterococcaceae-0.0170.450.562
speciesLactobacillus_crispatus-0.0170.460.573
genusKlebsiella0.0170.4650.578
speciesBacteroides_coprocola0.0160.4790.593
speciesEubacterium_cylindroides0.0160.4830.596
genusEnterobacter0.0160.4840.596
speciesEubacterium_ventriosum-0.0160.4920.605
familyClostridiales_Family_XI_Incertae_Sedis0.0160.4950.607
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0160.4970.608
speciesErysipelotrichaceae_bacterium_21_3-0.0150.5060.617
speciesLactococcus_garvieae0.0150.5080.618
speciesEnterococcus_faecium-0.0150.5110.618
genusPseudoflavonifractor-0.0150.5120.618
speciesPseudoflavonifractor_capillosus-0.0150.5120.618
speciesClostridium_perfringens0.0150.5170.622
speciesBifidobacterium_pseudocatenulatum0.0150.5180.622
speciesLactobacillus_sanfranciscensis-0.0150.520.623
familyMyoviridae0.0150.5280.631
speciesParabacteroides_sp_20_3-0.0140.5350.637
speciesRuminococcus_callidus-0.0140.5380.637
genusStaphylococcus0.0140.5390.637
speciesRoseburia_hominis-0.0140.5390.637
familyViruses_noname-0.0140.5410.637
genusViruses_noname-0.0140.5410.637
speciesBacteroides_fragilis0.0140.5480.643
genusSiphoviridae_noname-0.0140.5540.649
familyPodoviridae-0.0140.5570.651
genusMorganella0.0130.5660.658
speciesMorganella_morganii0.0130.5660.658
genusEnterococcus-0.0130.570.661
speciesKlebsiella_pneumoniae0.0130.5730.663
speciesStreptococcus_pasteurianus0.0130.5790.668
speciesLactobacillus_plantarum-0.0130.580.668
speciesGemella_morbillorum-0.0130.5890.676
speciesEnterobacter_cloacae0.0120.5920.678
familySiphoviridae-0.0120.6010.686
speciesLactobacillus_vaginalis-0.0120.6020.686
speciesParvimonas_unclassified0.0120.6170.701
genusParvimonas0.0120.6180.701
speciesEubacterium_eligens-0.0110.6210.703
speciesParabacteroides_sp_D13-0.0110.6280.709
orderCaudovirales-0.0110.6310.711
speciesBacteroides_sp_3_1_190.0110.6350.714
speciesEggerthella_lenta0.0110.6490.728
genusTunalikevirus0.010.6510.728
speciesWeissella_confusa0.010.6620.739
speciesOscillibacter_sp_KLE_17280.0090.6920.77
speciesLactobacillus_reuteri0.0090.6970.772
genusSolobacterium0.0090.6980.772
speciesSolobacterium_moorei0.0090.6980.772
genusPorphyromonas0.0090.7130.786
genusLeuconostoc-0.0080.7140.786
speciesEnterobacter_aerogenes0.0080.7160.786
speciesStreptococcus_infantarius0.0080.7260.794
genusFusobacterium-0.0080.7270.794
speciesClostridium_spiroforme0.0070.7520.82
speciesMegasphaera_elsdenii-0.0070.7550.821
speciesBacteroides_salanitronis0.0070.7660.831
orderEnterobacteriales-0.0070.7780.84
familyEnterobacteriaceae-0.0070.7780.84
speciesStreptococcus_lutetiensis-0.0060.7840.844
speciesPorphyromonas_asaccharolytica0.0060.7850.844
speciesLactococcus_lactis-0.0060.8020.86
genusGordonibacter0.0050.820.876
speciesGordonibacter_pamelaeae0.0050.820.876
genusLactococcus-0.0050.8260.88
genusSlackia-0.0050.8280.88
orderPseudomonadales-0.0050.8320.881
speciesBacteroides_fluxus0.0050.8320.881
genusAdlercreutzia-0.0040.850.893
speciesAdlercreutzia_equolifaciens-0.0040.850.893
phylumFusobacteria-0.0040.8530.893
classFusobacteriia-0.0040.8530.893
orderFusobacteriales-0.0040.8530.893
speciesCoprobacillus_sp_D60.0040.8660.904
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0040.8680.904
genusAcidaminococcaceae_unclassified-0.0040.8760.911
familyFusobacteriaceae-0.0040.8780.911
speciesEnterococcus_faecalis-0.0030.8830.914
genusButyricicoccus0.0030.8890.916
speciesButyricicoccus_pullicaecorum0.0030.8890.916
speciesHoldemania_unclassified0.0030.8930.918
speciesParabacteroides_unclassified-0.0030.9130.937
familyPrevotellaceae-0.0020.9270.949
speciesKlebsiella_sp_MS_92_30.0020.9310.951
orderAeromonadales0.0020.9330.951
speciesKlebsiella_phage_KP360.0020.9380.954
genusEscherichia0.0020.940.954
speciesEggerthella_sp_1_3_56FAA-0.0010.9550.967
genusMegasphaera-0.0010.9630.973
speciesEscherichia_coli-0.0010.9680.976
speciesCoprobacillus_sp_29_1-0.0010.9750.981
genusPeptoniphilus0.00.9860.986
speciesStreptococcus_phage_Sfi210.00.9860.986
speciesBacteroides_barnesiae0.00.9860.986
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Rheumatoid arthritisChina127980.06203215523640.04931131545260.0008926953246651810.603595
Liver cirrhosisChina1201140.04952683858050.07192561973840.00324520036786897330.1421
Crohns diseaseSpain17660.07270771504990.04961578052350.07741072578111294943.0557
ObesityDenmark1691230.05253973149720.04800276330790.0939315798505705623.2021
Colorectal cancerAustria64350.04384584706630.03886752967150.167685585267740725.0609
Ulcerative colitisSpain78660.05834946429640.04961578052350.3429980979391503249.5877
Type II diabetesChina1831850.06375342214660.0665335681990.4727606046772039067.3849
Type II diabetesDenmark752770.04717749083110.05074793770580.5253529965722108569.1153
Type II diabetesSweden53920.04037803690190.04152287009920.7014312062822144472.6177
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382