MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 09:58:17 PST
Job id & description: 2384, purine4
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0438_GL02190593028662Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
O2.UC41-1_GL00664703046133CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0382_GL01041913043450CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0006_GL00368273021199CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.CD3-0-PT_GL00861213029188CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC28-2_GL01046603045842CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC7-1_GL01806803030591CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
V1.CD35-0_GL00485533014992Lack 5'-endK05810COG1496FirmicutesClostridium100.0100.0100.0
556261.HMPREF0240_012613053102CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
O2.CD3-0-PT_GL00596463061475CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC37-0_GL00106833029904CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0239_GL00102983057080CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0416_GL00134893044201CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD35-0_GL00018653031126CompleteK05810COG1496unknownunknown100.0100.0100.0
706434.HMPREF9429_010753020984CompleteK05810COG1496FirmicutesMegasphaera100.0100.0100.0
MH0054_GL00002353038108CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0055_GL00448983038146CompleteK05810COG1496FirmicutesCoprococcus100.0100.0100.0
MH0335_GL00820943042473CompleteK05810COG1496FirmicutesVeillonella100.0100.0100.0
MH0377_GL00111583027246CompleteK05810COG1496FirmicutesRoseburia100.0100.0100.0
T2D-31A_GL00867453067373CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD21-4_GL00079663063166CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0196_GL00334033040318CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC15-1_GL01036763077975CompleteK05810COG1496unknownunknown100.0100.0100.0
T2D-59A_GL00219133067501CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD7-4_GL00199653063776CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
V1.FI05_GL01237333047576CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0011_GL00631663069877CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0053_GL00614773038105CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0086_GL00763013038454CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0239_GL01021273041055CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0318_GL01942613058339CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC41-1_GL00562363046131CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
MH0012_GL01188443069952CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0055_GL00451123038147CompleteK05810COG1496FirmicutesButyrivibrio100.0100.0100.0
MH0442_GL02452013028736Lack 5'-endK03783COG0005FirmicutesBlautia100.0100.0100.0
T2D-12A_GL00575003067057Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
411477.PARMER_040653020778CompleteK05810COG1496BacteroidetesParabacteroides100.0100.0100.0
763759525-stool2_revised3084785CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0108_GL00833653054965CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
MH0119_GL00172303022895CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0124_GL01232693022989Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0221_GL00231823073215CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
MH0247_GL01363753025059CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0349_GL00751193042718CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0358_GL00045023075476CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
T2D-61A_GL00290053083595CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
DLM023_GL00221523049409CompleteK03783COG0005FirmicutesFaecalibacterium100.0100.0100.0
MH0251_GL01001133073718CompleteK05810COG1496FirmicutesRuminococcus100.0100.0100.0
MH0357_GL00068683058960CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
N025A_GL00391403066471CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
NLM031_GL00853083066133CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
SZEY-90A_GL00294233067878CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
T2D-149A_GL01023193083257CompleteK05810COG1496FirmicutesVeillonella100.0100.0100.0
T2D-62A_GL00605353051188CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
V1.CD12-3_GL00448953079236CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
V1.FI23_GL00015283032028Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
V1.FI33_GL00417523064454CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
457421.CBFG_053583085406CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
MH0124_GL01113583071500CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0132_GL00517873055340CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
MH0236_GL00301213073454CompleteK05810COG1496FirmicutesVeillonella100.0100.0100.0
MH0245_GL00376913041135CompleteK03783COG0005FirmicutesFaecalibacterium100.0100.0100.0
V1.CD40-0_GL00599363063451CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
MH0090_GL00168773070873CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0372_GL01072813043215CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0407_GL00301913060162CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
O2.UC43-0_GL00575913062429CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
MH0077_GL00396603054389CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0328_GL00003063074910CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC32-1_GL00089463078400CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC34-0_GL00578293078428CompleteK05810COG1496FirmicutesVeillonella100.0100.0100.0
SZEY-43A_GL00269433082905CompleteK05810COG1496FirmicutesVeillonella100.0100.0100.0
585501.HMPREF6123_04473069472CompleteK05810COG1496FirmicutesOribacterium100.0100.0100.0
MH0287_GL00145933074379CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0335_GL00085863075058CompleteK05810COG1496FirmicutesVeillonella100.0100.0100.0
MH0451_GL00715753077498CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC35-1_GL00837233062232CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0011_GL00543513037500CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0035_GL00599353070244CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0189_GL00317383056190CompleteK03783COG0005unknownunknown100.0100.0100.0
NLF007_GL00283143065989Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
158944319-stool2_revised3051837Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0159_GL01147233072163CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0382_GL01587993043468CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0430_GL01826823044491Lack 5'-endK00757COG2820Bacteroidetesunknown100.0100.0100.0
MH0355_GL00919243058918CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0415_GL01473803060334CompleteK03783COG0005unknownunknown100.0100.0100.0
158499257-stool1_revised3068091Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
MH0107_GL00320523038846CompleteK03783COG0005unknownunknown100.0100.0100.0
765701615-stool1_revised3085115CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0419_GL00065703044240CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0183_GL00890203072440Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
MH0439_GL01414383077250CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0394_GL01768493076290CompleteK00772COG0005Firmicutesunknown100.0100.0100.0
T2D-6A_GL00350183083686CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI01_GL02029483031558CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC17-2_GL00617293032445CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0389_GL00374313076155CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0345_GL01429513075256CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0116_GL00848453071350CompleteK05810COG1496unknownunknown100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesBacteroides_uniformis0.4261.59e-837.5e-81
familyBacteroidaceae0.3247.19e-471.13e-44
genusBacteroides0.3247.19e-471.13e-44
speciesBacteroides_thetaiotaomicron0.2781.46e-341.72e-32
genusParabacteroides0.2512.82e-282.49e-26
familyPorphyromonadaceae0.2513.16e-282.49e-26
familyClostridiales_noname0.2463.53e-272.38e-25
genusClostridiales_noname0.2372.77e-251.63e-23
speciesClostridiales_bacterium_1_7_47FAA0.2313.6e-241.89e-22
speciesClostridium_hathewayi0.2172.07e-219.77e-20
speciesPrevotella_copri-0.2155.47e-212.35e-19
speciesClostridium_bolteae0.2011.51e-185.94e-17
speciesClostridium_symbiosum0.22.4e-188.71e-17
genusPrevotella-0.1986.53e-182.08e-16
familyPrevotellaceae-0.1986.6e-182.08e-16
speciesClostridium_asparagiforme0.1873.3e-169.73e-15
genusFlavonifractor0.1857.34e-161.92e-14
speciesFlavonifractor_plautii0.1857.34e-161.92e-14
familyClostridiaceae0.1831.3e-153.23e-14
genusClostridium0.1822.25e-155.31e-14
speciesClostridium_citroniae0.1813.25e-157.3e-14
familyOscillospiraceae0.1743.73e-147.65e-13
genusOscillibacter0.1743.73e-147.65e-13
speciesBacteroides_ovatus0.1692.09e-134.11e-12
speciesBacteroides_plebeius-0.1612.36e-124.46e-11
speciesOscillibacter_unclassified0.163.12e-125.66e-11
speciesCollinsella_aerofaciens-0.1523.72e-116.5e-10
speciesDorea_longicatena-0.1524.48e-117.55e-10
speciesLachnospiraceae_bacterium_7_1_58FAA0.1515.68e-119.24e-10
genusCollinsella-0.1443.92e-106.17e-09
genusBifidobacterium-0.1427.33e-101.12e-08
speciesClostridium_clostridioforme0.1427.59e-101.12e-08
speciesBacteroides_xylanisolvens0.1418.23e-101.18e-08
familyRikenellaceae0.1411.04e-091.4e-08
genusAlistipes0.1411.04e-091.4e-08
orderBifidobacteriales-0.141.18e-091.51e-08
familyBifidobacteriaceae-0.141.18e-091.51e-08
genusDorea-0.1391.53e-091.85e-08
speciesBacteroides_fragilis0.1391.53e-091.85e-08
phylumBacteroidetes0.1382.07e-092.34e-08
classBacteroidia0.1382.08e-092.34e-08
orderBacteroidales0.1382.08e-092.34e-08
speciesBacteroides_cellulosilyticus0.1372.88e-093.16e-08
speciesOdoribacter_splanchnicus0.1363.89e-094.17e-08
genusCoprococcus-0.1364e-094.2e-08
speciesBacteroides_dorei0.1345.8e-095.92e-08
speciesBifidobacterium_adolescentis-0.1345.89e-095.92e-08
speciesCoprococcus_comes-0.1329.59e-099.43e-08
speciesAnaerotruncus_colihominis0.1329.95e-099.58e-08
phylumActinobacteria-0.1321.06e-089.81e-08
classActinobacteria-0.1321.06e-089.81e-08
genusOdoribacter0.1311.27e-081.15e-07
speciesMegamonas_funiformis-0.131.51e-081.34e-07
genusHoldemania0.1273.43e-083e-07
speciesAnaerostipes_unclassified0.1264.85e-084.16e-07
speciesBacteroides_coprocola-0.1247.22e-086.09e-07
speciesBlautia_producta0.1238.82e-087.3e-07
genusPeptostreptococcaceae_noname-0.122e-071.63e-06
speciesRuminococcus_obeum-0.1173.62e-072.9e-06
classDeltaproteobacteria0.1173.96e-073.01e-06
orderDesulfovibrionales0.1173.96e-073.01e-06
familyDesulfovibrionaceae0.1173.96e-073.01e-06
speciesBacteroides_nordii0.1174.02e-073.01e-06
speciesBifidobacterium_longum-0.1174.1e-073.02e-06
speciesParabacteroides_merdae0.1174.34e-073.15e-06
speciesClostridium_ramosum0.1164.88e-073.49e-06
genusAnaerotruncus0.1147.02e-074.95e-06
familyPeptostreptococcaceae-0.1147.49e-075.2e-06
speciesPeptostreptococcaceae_noname_unclassified-0.1092.39e-061.63e-05
speciesButyrivibrio_crossotus0.1082.59e-061.75e-05
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1064.71e-063.13e-05
speciesDorea_formicigenerans-0.1055.08e-063.33e-05
speciesMegamonas_hypermegale-0.1055.81e-063.76e-05
speciesCoprobacillus_unclassified0.1046.15e-063.92e-05
speciesEubacterium_rectale-0.1046.35e-064e-05
speciesMegamonas_unclassified-0.1038.49e-065.27e-05
speciesBifidobacterium_bifidum-0.1038.84e-065.42e-05
genusMegamonas-0.1029.12e-065.52e-05
speciesTuricibacter_sanguinis-0.1029.86e-065.89e-05
genusBilophila0.1021.09e-056.43e-05
speciesCoprococcus_catus-0.1011.26e-057.34e-05
speciesBilophila_unclassified0.1011.29e-057.43e-05
familyCampylobacteraceae0.11.56e-058.87e-05
orderCoriobacteriales-0.0991.64e-059.11e-05
familyCoriobacteriaceae-0.0991.64e-059.11e-05
speciesDialister_succinatiphilus-0.0991.7e-059.33e-05
genusCampylobacter0.0991.86e-050.000101
speciesEubacterium_hallii-0.0991.89e-050.000101
familyEubacteriaceae-0.0991.94e-050.000103
genusEubacterium-0.0982.06e-050.000108
speciesEubacterium_biforme-0.0982.25e-050.000117
genusClostridiaceae_noname0.0972.49e-050.000126
speciesClostridiaceae_bacterium_JC1180.0972.49e-050.000126
speciesErysipelotrichaceae_bacterium_21_30.0972.88e-050.000145
speciesEubacterium_sp_3_1_310.0963.09e-050.000154
speciesOscillibacter_sp_KLE_17450.0963.35e-050.000165
speciesBilophila_wadsworthia0.0963.45e-050.000168
genusEnterobacter-0.0953.64e-050.000175
speciesEnterobacter_cloacae-0.0944.79e-050.000228
speciesFusobacterium_ulcerans0.0944.91e-050.000232
genusTuricibacter-0.0935.42e-050.000253
genusCoprobacillus0.0935.56e-050.000257
speciesClostridium_sp_KLE_17550.0935.71e-050.000262
familyVeillonellaceae-0.099.03e-050.00041
speciesLachnospiraceae_bacterium_5_1_57FAA0.0890.0001160.000521
classEpsilonproteobacteria0.0880.0001330.000587
orderCampylobacterales0.0880.0001330.000587
genusParaprevotella-0.0870.0001690.000739
speciesMegamonas_rupellensis-0.0860.0002070.000896
speciesAlistipes_onderdonkii0.0860.000210.000901
speciesTuricibacter_unclassified-0.0850.0002240.000953
speciesClostridium_nexile0.0850.0002490.00105
speciesParaprevotella_unclassified-0.0840.0002680.00112
speciesCoprococcus_sp_ART55_1-0.0840.0002960.00123
speciesPrevotella_buccae0.0830.0003050.00125
genusSolobacterium-0.0810.0004220.0017
speciesSolobacterium_moorei-0.0810.0004220.0017
speciesSubdoligranulum_sp_4_3_54A2FAA0.080.0005060.00202
phylumFirmicutes-0.0790.000590.00232
speciesFusobacterium_nucleatum0.0790.000590.00232
familyRuminococcaceae-0.0790.000640.0025
speciesStreptococcus_sanguinis-0.0780.0006960.00268
genusHaemophilus-0.0780.0006990.00268
speciesStreptococcus_salivarius-0.0780.0007080.00269
orderPasteurellales-0.0770.0008040.00301
familyPasteurellaceae-0.0770.0008040.00301
genusRuminococcus-0.0770.0008270.00307
speciesHaemophilus_parainfluenzae-0.0770.0008640.00319
speciesClostridium_bartlettii-0.0760.0010.00366
speciesHoldemania_sp_AP20.0760.001040.00378
speciesAnaerostipes_hadrus-0.0750.001190.00429
speciesMegasphaera_micronuciformis0.0740.001290.00461
speciesCampylobacter_concisus0.0740.00140.00497
speciesEggerthella_unclassified0.0740.001440.00507
speciesErysipelotrichaceae_bacterium_2_2_44A0.0730.001610.00562
speciesParaprevotella_xylaniphila-0.0730.001620.00562
speciesBacteroides_oleiciplenus0.0720.001840.00629
speciesEubacterium_dolichum0.0720.001840.00629
speciesLachnospiraceae_bacterium_6_1_63FAA0.0720.001880.00638
speciesEubacterium_ramulus-0.0710.002090.00705
speciesRuminococcus_bromii-0.070.002550.00854
classBacilli-0.070.002590.00861
speciesLachnospiraceae_bacterium_9_1_43BFAA0.070.002610.00861
orderLactobacillales-0.070.002630.00862
speciesHoldemania_filiformis0.0690.002980.0097
genusActinomyces-0.0680.003160.0102
genusEggerthella0.0680.003210.0103
speciesParaprevotella_clara-0.0680.003390.0107
speciesRuminococcus_gnavus0.0680.003390.0107
speciesAlistipes_putredinis0.0670.003740.0118
speciesDesulfovibrio_desulfuricans0.0660.004130.0129
genusButyricimonas0.0660.004290.0132
speciesButyricimonas_synergistica0.0660.004290.0132
speciesRoseburia_inulinivorans-0.0650.004830.0148
speciesBacteroides_intestinalis0.0650.004870.0148
familyLeuconostocaceae-0.0650.005110.0154
classNegativicutes-0.0650.005140.0154
orderSelenomonadales-0.0650.005140.0154
speciesButyrivibrio_unclassified-0.0640.005870.0174
genusMorganella0.0630.006230.0183
speciesMorganella_morganii0.0630.006230.0183
familyActinomycetaceae-0.0630.00640.0186
genusLactobacillus-0.0630.006480.0188
speciesOlsenella_unclassified-0.0620.006990.02
genusFaecalibacterium-0.0620.007030.02
speciesFaecalibacterium_prausnitzii-0.0620.007030.02
familyLactobacillaceae-0.0610.007880.0223
speciesBifidobacterium_catenulatum-0.0610.007930.0223
familyStreptococcaceae-0.0610.008160.0228
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0610.008220.0228
speciesHoldemania_unclassified0.0610.008250.0228
genusPseudoflavonifractor0.0610.00850.0232
speciesPseudoflavonifractor_capillosus0.0610.00850.0232
speciesRuminococcus_sp_5_1_39BFAA-0.0610.008870.0241
genusStreptococcus-0.060.008980.0242
speciesWeissella_cibaria-0.060.009540.0256
speciesErysipelotrichaceae_bacterium_3_1_530.060.009670.0258
genusButyricicoccus0.0590.01050.0277
speciesButyricicoccus_pullicaecorum0.0590.01050.0277
speciesAlistipes_sp_AP110.0590.01070.0281
speciesBacteroides_vulgatus0.0590.01130.0295
speciesParabacteroides_goldsteinii0.0570.01390.036
genusDesulfovibrio0.0570.01420.0366
speciesAlistipes_shahii0.0560.01580.0405
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0560.01620.0413
speciesBacteroides_massiliensis-0.0550.01660.0421
genusLeuconostoc-0.0550.0170.0429
classClostridia-0.0550.01720.043
orderClostridiales-0.0550.01720.043
speciesParabacteroides_unclassified0.0550.01830.0448
phylumSynergistetes0.0550.01840.0448
classSynergistia0.0550.01840.0448
orderSynergistales0.0550.01840.0448
familySynergistaceae0.0550.01840.0448
speciesKlebsiella_pneumoniae-0.0540.01870.0453
speciesMethanobrevibacter_smithii-0.0540.01930.0465
speciesBacteroides_caccae0.0540.01970.0472
speciesLactobacillus_sanfranciscensis-0.0530.02130.0508
speciesAnaerotruncus_unclassified0.0530.02220.0527
speciesLactobacillus_rhamnosus-0.0520.02460.0578
speciesFusobacterium_varium0.0520.02460.0578
speciesEnterobacter_aerogenes-0.0510.0260.0599
phylumVerrucomicrobia0.0510.02640.0599
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speciesErysipelotrichaceae_bacterium_6_1_450.0510.0270.0601
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speciesBacteroides_sp_2_1_220.050.02930.0629
speciesStreptococcus_infantarius-0.050.03140.0671
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genusOlsenella-0.0490.03310.0701
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speciesRuminococcus_callidus-0.0490.03440.0722
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speciesParabacteroides_distasonis0.0460.04660.0916
genusPyramidobacter0.0460.04790.0934
speciesPyramidobacter_piscolens0.0460.04790.0934
familyFusobacteriaceae0.0450.05160.0994
speciesStreptococcus_phage_Sfi210.0450.05170.0994
genusAdlercreutzia-0.0450.05180.0994
speciesAdlercreutzia_equolifaciens-0.0450.05180.0994
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orderMethanobacteriales-0.0450.05380.102
familyMethanobacteriaceae-0.0450.05380.102
speciesCollinsella_intestinalis0.0450.05430.103
genusCatenibacterium-0.0440.05620.105
speciesCatenibacterium_mitsuokai-0.0440.05620.105
genusActinobacillus-0.0440.05660.105
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speciesRothia_mucilaginosa-0.0440.05690.105
speciesMethanobrevibacter_unclassified-0.0430.06040.111
speciesRoseburia_intestinalis-0.0430.06180.114
speciesBifidobacterium_animalis-0.0420.06670.122
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speciesAlistipes_sp_HGB50.0420.07060.128
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speciesMegasphaera_elsdenii-0.0410.07590.136
genusRoseburia-0.0410.07730.138
speciesStreptococcus_mutans-0.0410.07770.138
speciesWeissella_confusa-0.040.08050.142
speciesClostridium_perfringens-0.040.08050.142
speciesBifidobacterium_angulatum-0.040.08150.143
speciesBifidobacterium_breve-0.040.08580.15
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speciesEubacterium_ventriosum-0.0380.09660.167
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speciesLactobacillus_ruminis-0.0380.10.172
orderViruses_noname-0.0380.1010.172
speciesPrevotella_bivia0.0380.1010.172
genusCoriobacteriaceae_noname0.0380.1030.175
speciesCoriobacteriaceae_bacterium_phI0.0380.1040.176
speciesStreptococcus_parasanguinis-0.0370.1060.179
speciesAlistipes_unclassified0.0360.1150.193
speciesKlebsiella_phage_KP36-0.0360.1180.198
speciesBacteroides_coprophilus-0.0360.1240.207
speciesCollinsella_unclassified0.0350.1290.214
speciesSutterella_wadsworthensis-0.0350.1330.22
speciesStreptococcus_anginosus-0.0350.1350.222
speciesLachnospiraceae_bacterium_2_1_58FAA0.0350.1350.222
familyMicrococcaceae-0.0340.1360.223
speciesDialister_invisus0.0340.1390.227
orderActinomycetales-0.0340.1410.229
speciesLactobacillus_amylovorus-0.0340.1410.229
genusRothia-0.0340.1430.231
genusParasutterella0.0330.1480.238
speciesParasutterella_excrementihominis0.0330.1480.238
genusBlautia0.0330.1520.242
speciesOdoribacter_laneus0.0330.1520.242
speciesEubacterium_cylindroides-0.0330.1530.243
classBetaproteobacteria0.0330.1550.246
genusMyoviridae_noname-0.0320.1640.259
genusMethanosphaera-0.0320.1660.26
speciesMethanosphaera_stadtmanae-0.0320.1660.26
speciesDorea_unclassified0.0320.1680.263
speciesBacteroides_pectinophilus0.0320.1730.269
speciesOscillibacter_sp_KLE_17280.0310.1750.272
speciesLactobacillus_oris0.0310.1790.277
speciesStreptococcus_vestibularis-0.0310.1830.282
speciesBacteroides_salanitronis-0.0310.1870.288
orderEnterobacteriales-0.030.190.289
familyBurkholderiales_noname0.030.190.289
familyEnterobacteriaceae-0.030.190.289
genusBurkholderiales_noname0.030.1940.293
speciesBurkholderiales_bacterium_1_1_470.030.1940.293
speciesLachnospiraceae_bacterium_2_1_46FAA0.0290.2040.308
speciesStreptococcus_australis-0.0290.2090.313
speciesVeillonella_unclassified-0.0290.2090.313
orderBurkholderiales0.0290.2130.318
speciesParabacteroides_johnsonii0.0280.2180.325
speciesKlebsiella_oxytoca-0.0280.2260.335
speciesClostridium_sp_L2_50-0.0280.2270.336
speciesEggerthella_sp_1_3_56FAA-0.0280.2330.344
speciesLeuconostoc_lactis-0.0270.2360.347
speciesStreptococcus_mitis_oralis_pneumoniae-0.0270.2440.358
speciesClostridium_sp_ATCC_BAA_4420.0270.2460.359
familyBacillales_noname-0.0270.2510.365
genusGemella-0.0270.2510.365
genusPeptoniphilus0.0260.2530.366
genusSutterella-0.0260.2560.37
genusLambdalikevirus-0.0260.2580.371
speciesHaemophilus_sputorum-0.0260.260.373
speciesBifidobacterium_dentium-0.0260.2630.376
speciesLachnospiraceae_bacterium_3_1_46FAA0.0260.2660.379
speciesCitrobacter_freundii-0.0260.2680.381
speciesEscherichia_unclassified-0.0260.2690.381
speciesRuminococcus_sp_JC304-0.0250.280.396
speciesParvimonas_unclassified-0.0250.2840.4
genusParvimonas-0.0250.2860.401
speciesSutterella_parvirubra0.0250.2860.401
genusSubdoligranulum0.0250.2890.404
speciesLactococcus_lactis-0.0240.2940.409
speciesLactobacillus_gasseri-0.0240.2990.415
speciesLactococcus_phage_P6800.0240.3030.419
speciesLactococcus_phage_jm2-0.0230.3220.444
genusRuminococcaceae_noname0.0230.3240.445
speciesRuminococcaceae_bacterium_D160.0230.3240.445
speciesRuminococcus_lactaris0.0230.3290.45
speciesLactococcus_garvieae-0.0220.3360.458
genusCoprobacter0.0220.3410.463
speciesCoprobacter_fastidiosus0.0220.3410.463
speciesEggerthella_lenta0.0210.3630.491
speciesEnterobacteria_phage_HK5440.0210.3660.494
genusProteus0.0210.3710.499
speciesEnterococcus_faecium-0.0210.3720.499
phylumViruses_noname-0.0210.3740.499
classViruses_noname-0.0210.3740.499
speciesCitrobacter_unclassified-0.020.3760.5
speciesSubdoligranulum_unclassified0.020.3840.509
genusSlackia0.020.3970.525
speciesPeptostreptococcus_stomatis0.0190.4010.529
genusSiphoviridae_noname0.0190.410.539
speciesBacteroides_clarus0.0190.4210.552
speciesStreptococcus_pasteurianus-0.0180.4280.559
speciesVeillonella_atypica-0.0180.4290.559
genusCitrobacter-0.0180.4360.565
genusVeillonella-0.0180.4360.565
speciesCoprobacillus_sp_29_1-0.0180.4430.573
familyStaphylococcaceae-0.0170.4490.579
genusDialister-0.0170.4520.581
speciesLactobacillus_mucosae-0.0170.4530.581
speciesEubacterium_siraeum-0.0170.4560.583
speciesBacteroides_faecis0.0170.460.587
speciesBacteroides_finegoldii-0.0170.4740.603
speciesPeptostreptococcus_anaerobius-0.0160.4770.605
genusAnaerostipes-0.0160.4850.614
speciesBacteroides_eggerthii-0.0160.4890.617
speciesAlistipes_senegalensis0.0160.4910.617
genusErysipelotrichaceae_noname-0.0160.4920.617
orderPseudomonadales-0.0160.4930.617
speciesLactobacillus_delbrueckii-0.0160.4950.617
genusAcidaminococcaceae_unclassified0.0160.4960.617
speciesParabacteroides_sp_20_3-0.0160.4970.617
genusBarnesiella-0.0160.50.618
speciesBarnesiella_intestinihominis-0.0160.50.618
speciesLactobacillus_crispatus-0.0150.5170.637
speciesStreptococcus_lutetiensis-0.0150.520.639
speciesCoprococcus_eutactus-0.0150.5240.642
speciesOdoribacter_unclassified-0.0150.5270.644
speciesVeillonella_dispar0.0150.5280.644
speciesRoseburia_hominis-0.0140.5480.667
familyPropionibacteriaceae0.0130.5640.684
genusStaphylococcus-0.0130.5790.701
speciesGemella_morbillorum-0.0130.5860.707
speciesProteus_mirabilis0.0120.5990.72
genusSutterellaceae_unclassified-0.0120.60.72
genusMegasphaera-0.0120.6010.72
speciesLactobacillus_plantarum-0.0120.6080.727
familySutterellaceae0.0120.6110.728
speciesBacteroides_sp_4_3_47FAA0.0120.6170.734
speciesFusobacterium_mortiferum-0.0120.6190.734
speciesEnterococcus_faecalis-0.0110.6230.737
genusMitsuokella-0.0110.6460.762
genusPropionibacterium-0.0110.6480.763
speciesKlebsiella_sp_MS_92_30.0110.650.763
speciesAlistipes_indistinctus0.010.6530.765
speciesRuminococcus_champanellensis0.010.6550.765
genusAcidaminococcus0.010.6590.767
speciesBacteroides_barnesiae0.010.660.767
speciesPropionibacterium_freudenreichii-0.010.670.777
speciesCoprobacillus_sp_D6-0.010.6760.782
speciesAggregatibacter_segnis0.0090.6820.787
genusAggregatibacter-0.0090.6860.789
phylumProteobacteria0.0090.6880.789
speciesC2likevirus_unclassified0.0090.6890.789
speciesCollinsella_tanakaei-0.0090.7010.801
speciesBlautia_hydrogenotrophica0.0090.7090.807
genusPantoea0.0090.7110.807
speciesPantoea_unclassified0.0090.7110.807
genusPorphyromonas0.0080.7170.812
familyClostridiales_Family_XI_Incertae_Sedis-0.0080.7230.816
genusC2likevirus0.0080.740.831
speciesLactococcus_phage_936_sensu_lato0.0080.740.831
genusPhascolarctobacterium-0.0080.7430.831
speciesPhascolarctobacterium_succinatutens-0.0080.7430.831
speciesBacteroides_sp_3_1_19-0.0080.7450.831
speciesPorphyromonas_uenonis0.0070.7530.836
speciesAcidaminococcus_intestini0.0070.7530.836
speciesRoseburia_unclassified0.0070.760.841
speciesBacteroides_fluxus0.0070.7610.841
speciesHaemophilus_paraphrohaemolyticus-0.0070.7650.842
speciesPorphyromonas_asaccharolytica0.0070.7650.842
speciesLactobacillus_reuteri-0.0060.780.85
familySuccinivibrionaceae-0.0060.7810.85
speciesLachnospiraceae_bacterium_1_1_57FAA0.0060.7830.85
speciesDesulfovibrio_piger-0.0060.7850.85
speciesMitsuokella_unclassified-0.0060.7860.85
genusSuccinatimonas-0.0060.7870.85
speciesLactobacillus_vaginalis0.0060.7870.85
speciesSuccinatimonas_hippei-0.0060.7870.85
familyLachnospiraceae-0.0060.7890.85
speciesSlackia_piriformis-0.0060.7940.854
speciesLactobacillus_casei_paracasei0.0060.8030.861
familyMyoviridae-0.0050.820.876
speciesLactobacillus_salivarius0.0050.820.876
genusEscherichia-0.0050.8220.876
speciesLactococcus_phage_bIL67-0.0050.8370.89
speciesLactobacillus_acidophilus-0.0050.8410.891
speciesBacteroides_salyersiae0.0050.8420.891
speciesLactobacillus_fermentum-0.0050.8440.891
familyPodoviridae0.0040.8460.891
speciesStreptococcus_thermophilus-0.0040.8530.897
speciesEubacterium_limosum-0.0040.8610.903
speciesAcidaminococcus_fermentans0.0040.8660.906
familySiphoviridae-0.0040.8690.907
speciesVeillonella_parvula0.0030.8840.92
speciesLactococcus_phage_phi70.0030.8850.92
familyAcidaminococcaceae0.0030.8880.921
speciesClostridium_spiroforme0.0030.8920.923
speciesAcidaminococcus_unclassified-0.0030.8970.926
classErysipelotrichia0.0020.9150.939
orderErysipelotrichales0.0020.9150.939
familyErysipelotrichaceae0.0020.9150.939
orderCaudovirales0.0020.920.942
speciesBacteroides_stercoris-0.0020.9230.943
familyViruses_noname0.0020.930.946
genusViruses_noname0.0020.930.946
orderAeromonadales-0.0020.9350.949
genusEnterococcus-0.0020.9420.954
genusGordonibacter-0.0010.9660.974
speciesGordonibacter_pamelaeae-0.0010.9660.974
genusPeptostreptococcus0.0010.9820.988
speciesEscherichia_coli0.00.9860.989
familyEnterococcaceae0.00.9870.989
speciesParabacteroides_sp_D130.00.9970.997
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.1135686606130.07646800027350.00244801204364546018.1546
Liver cirrhosisChina1201140.09511396934840.07562832143880.007314646079431023534.3814
Type II diabetesChina1831850.09472842027290.08558740562680.0368750216773618920.4534
Colorectal cancerAustria64350.0693857991290.05724818160460.109763677548540918.3009
Type II diabetesDenmark752770.09337606436220.08322257417540.2023319513071310142.9442
Rheumatoid arthritisChina127980.08151856314970.07361914493740.2394781139531014633.8347
ObesityDenmark1691230.08012595728990.08691104680020.2927372089731394445.8518
Type II diabetesSweden53920.08640419137510.0772607915870.555044779671749659.2482
Ulcerative colitisSpain78660.07378875419520.07646800027350.8964453260742804192.5018
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382