MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 09:58:58 PST
Job id & description: 2385, purine5
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0006_GL00750763085776CompleteK05810COG1496unknownunknown100.0100.0100.0
657314.CK5_288103101386CompleteK05810COG1496FirmicutesBlautia100.0100.0100.0
MH0370_GL01353693091601CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0006_GL00995813085786CompleteK05810COG1496FirmicutesRuminococcus100.0100.0100.0
O2.CD3-0-PT_GL01130713093685CompleteK05810COG1496FirmicutesRuminococcus100.0100.0100.0
MH0420_GL00699463092699CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC49-0_GL00755613094834CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD15-3_GL01297823111595CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.CD3-0-PT_GL00789203093668CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC15-2_GL00847623110264CompleteK05810COG1496unknownunknown100.0100.0100.0
469589.HMPREF0103_24093085412CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
MH0193_GL01520943088677CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0200_GL01808423121268CompleteK05810COG1496FirmicutesRuminococcus100.0100.0100.0
MH0337_GL01384673123525CompleteK05810COG1496FirmicutesRuminococcus100.0100.0100.0
V1.CD20-4_GL00434863095313CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0047_GL00169293086400CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0088_GL00760723119243CompleteK05810COG1496FirmicutesRuminococcus100.0100.0100.0
160218816-stool1_revised3100577Lack 5'-endK05810COG1496BacteroidetesBacteroides100.0100.0100.0
546273.VEIDISOL_005313085473CompleteK05810COG1496FirmicutesVeillonella100.0100.0100.0
MH0211_GL00957703105312CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0309_GL01115053090507CompleteK05810COG1496FirmicutesCoprococcus100.0100.0100.0
O2.UC13-2_GL01266353093842CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC36-0_GL00870073127053CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD3-0-PN_GL00395213111839CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI02_GL01430553096010CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0188_GL00054383104707CompleteK05810COG1496FirmicutesEubacterium100.0100.0100.0
MH0204_GL01224043121349CompleteK03783COG0005FirmicutesFaecalibacterium100.0100.0100.0
MH0357_GL01011053107622CompleteK00772COG0005unknownunknown100.0100.0100.0
O2.UC48-0_GL00383733111091CompleteK05810COG1496FirmicutesBlautia100.0100.0100.0
T2D-61A_GL00369903099655CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
V1.CD46-0_GL01203323128357CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
MH0069_GL00348273135546CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC11-1_GL00167433126398CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0200_GL01718953137724CompleteK05810COG1496BacteroidetesPrevotella100.0100.0100.0
MH0370_GL00188073091530CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
MH0188_GL00783893120877CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
T2D-15A_GL00141183115622Lack 5'-endK03783COG0005BacteroidetesCapnocytophaga100.0100.0100.0
V1.FI32_GL01073653096574Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0011_GL00669273102060CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0012_GL01368213102147CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0063_GL00424593135478CompleteK05810COG1496BacteroidetesPrevotella100.0100.0100.0
MH0157_GL01274613120515CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0172_GL00128683120653CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0230_GL00244133121716CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0373_GL00038993091672CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0145_GL01637363120332CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0308_GL00457443139343CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0357_GL00669773140195CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0373_GL01410553124327CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0441_GL01729733093189CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.CD3-0-PT_GL00029253093637CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD12-3_GL00899873111570CompleteK03783COG0005FirmicutesBlautia100.0100.0100.0
MH0001_GL00041093150959CompleteK05810COG1496BacteroidetesPrevotella100.0100.0100.0
MH0031_GL00170953102377CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0230_GL01499803105595CompleteK03783COG0005FirmicutesEubacterium100.0100.0100.0
MH0239_GL01730103105785CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0246_GL00795133105872CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0247_GL00483183138440CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0354_GL00691873091156CompleteK00772COG0005unknownunknown100.0100.0100.0
V1.CD21-0_GL00419083144308CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD21-4_GL00871213095385CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD46-0_GL00213683128337CompleteK03783COG0005FirmicutesBlautia100.0100.0100.0
V1.UC60-0_GL00624303130298CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0100_GL00038043135987CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0023_GL00106333151502CompleteK05810COG1496Bacteroidetesunknown100.0100.0100.0
MH0030_GL00292673151576CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0355_GL00937163140125CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.CD3-0-PT_GL00880863142632CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC20-1_GL01340093126691CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD29-0_GL01038913128035CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
V1.UC54-0_GL01825203130151CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0200_GL01198043105147CompleteK05810COG1496FirmicutesEubacterium100.0100.0100.0
T2D-173A_GL00525253115643Lack 5'-endK03783COG0005FirmicutesRoseburia100.0100.0100.0
V1.CD43-0_GL01078903128310CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC14-1_GL00470213113258CompleteK03783COG0005unknownunknown100.0100.0100.0
158944319-stool1_revised3116604Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
MH0006_GL01263433101917Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0206_GL02391393137867CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0441_GL00680213109562Lack 5'-endK03784COG0813Firmicutesunknown100.0100.0100.0
NLF001_GL00004793147179CompleteK03783COG0005FirmicutesRoseburia100.0100.0100.0
V1.FI11_GL01470823128778CompleteK03783COG0005BacteroidetesBacteroides100.0100.0100.0
V1.FI17_GL00659183145345CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0220_GL01874843105408CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0230_GL01677173138170Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0452_GL01597193142376CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0287_GL00406333139128CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-9A_GL00263833149004Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
V1.UC39-0_GL01515153146240Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
MH0205_GL00587753137811CompleteK03783COG0005FirmicutesCoprococcus100.0100.0100.0
T2D-59A_GL00556543148776Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
160704339-stool1_revised3133424Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
T2D-70A_GL00756633116068CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0013_GL00236503151389CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC48-0_GL02666283111156CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0011_GL00005283102030CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI28_GL01755693096535Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
BGI-33A_GL00022563147583CompleteK03783COG1683;COG0005unknownunknown100.0100.0100.0
457398.HMPREF0326_011393101473CompleteK03783COG0005ProteobacteriaDesulfovibrio100.0100.0100.0
MH0012_GL00685813134807CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.FI04_GL01449333145050CompleteK03783COG0005unknownunknown100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
classBacteroidia0.3253.97e-476.29e-45
orderBacteroidales0.3253.97e-476.29e-45
phylumBacteroidetes0.3254e-476.29e-45
phylumFirmicutes-0.33.08e-403.63e-38
classClostridia-0.2941.07e-388.42e-37
orderClostridiales-0.2941.07e-388.42e-37
familyRuminococcaceae-0.2838.12e-365.48e-34
speciesPrevotella_copri0.2741.52e-338.97e-32
speciesSubdoligranulum_unclassified-0.2635.11e-312.68e-29
genusSubdoligranulum-0.2637.38e-313.48e-29
genusPrevotella0.2571.7e-297.29e-28
speciesAnaerotruncus_unclassified-0.2341.08e-244.25e-23
familyPrevotellaceae0.2331.95e-247.08e-23
speciesMethanobrevibacter_smithii-0.2322.85e-249.61e-23
genusMethanobrevibacter-0.2323.55e-241.12e-22
phylumEuryarchaeota-0.237.13e-242.1e-22
classMethanobacteria-0.2291.26e-233.13e-22
orderMethanobacteriales-0.2291.26e-233.13e-22
familyMethanobacteriaceae-0.2291.26e-233.13e-22
genusAnaerotruncus-0.2096.79e-201.6e-18
speciesEubacterium_siraeum-0.22.61e-185.68e-17
familyBacteroidales_noname-0.22.89e-185.68e-17
genusBacteroidales_noname-0.22.89e-185.68e-17
speciesBacteroidales_bacterium_ph8-0.22.89e-185.68e-17
genusPseudoflavonifractor-0.1882.81e-165.1e-15
speciesPseudoflavonifractor_capillosus-0.1882.81e-165.1e-15
speciesBacteroides_stercoris0.1864.29e-167.5e-15
genusButyrivibrio-0.1865.64e-169.51e-15
familyLachnospiraceae-0.1849.02e-161.47e-14
genusFaecalibacterium-0.183.89e-155.92e-14
speciesFaecalibacterium_prausnitzii-0.183.89e-155.92e-14
speciesAlistipes_senegalensis-0.1796.6e-159.73e-14
speciesMitsuokella_unclassified-0.1728.21e-141.17e-12
speciesRuminococcus_bromii-0.171.19e-131.65e-12
speciesCoprococcus_catus-0.1673.85e-135.19e-12
genusOxalobacter-0.1641.01e-121.29e-11
speciesOxalobacter_formigenes-0.1641.01e-121.29e-11
genusMitsuokella-0.1641.07e-121.33e-11
familyOxalobacteraceae-0.1621.9e-122.3e-11
speciesEubacterium_eligens-0.163.39e-124e-11
genusEubacterium-0.1594.04e-124.65e-11
familyEubacteriaceae-0.1594.5e-125.06e-11
familyRikenellaceae-0.1578.88e-129.53e-11
genusAlistipes-0.1578.88e-129.53e-11
genusBarnesiella-0.1551.65e-111.69e-10
speciesBarnesiella_intestinihominis-0.1551.65e-111.69e-10
genusCoprococcus-0.1532.83e-112.84e-10
speciesMethanobrevibacter_unclassified-0.1523.84e-113.78e-10
speciesAlistipes_shahii-0.1515.4e-115.2e-10
speciesRuminococcus_obeum-0.1498.88e-118.38e-10
speciesCoprococcus_sp_ART55_1-0.1453.03e-102.8e-09
speciesBacteroides_ovatus0.1435.16e-104.68e-09
speciesAlistipes_onderdonkii-0.1426.81e-106.06e-09
phylumVerrucomicrobia-0.1391.57e-091.26e-08
classVerrucomicrobiae-0.1391.57e-091.26e-08
orderVerrucomicrobiales-0.1391.57e-091.26e-08
familyVerrucomicrobiaceae-0.1391.57e-091.26e-08
genusAkkermansia-0.1391.57e-091.26e-08
speciesAkkermansia_muciniphila-0.1391.57e-091.26e-08
speciesRuminococcus_gnavus0.1391.63e-091.28e-08
speciesBlautia_producta0.1345.56e-094.3e-08
genusCoprobacter-0.1345.97e-094.47e-08
speciesCoprobacter_fastidiosus-0.1345.97e-094.47e-08
speciesBacteroides_cellulosilyticus-0.1337.8e-095.75e-08
speciesRoseburia_hominis-0.1337.92e-095.75e-08
speciesRuminococcus_lactaris-0.131.53e-081.09e-07
genusOdoribacter-0.1264.27e-083.01e-07
familyPeptostreptococcaceae-0.1264.59e-083.19e-07
speciesButyrivibrio_crossotus-0.1255.51e-083.77e-07
orderBifidobacteriales-0.1238.86e-085.89e-07
familyBifidobacteriaceae-0.1238.86e-085.89e-07
genusBifidobacterium-0.1221.33e-078.72e-07
speciesOdoribacter_splanchnicus-0.1221.35e-078.73e-07
speciesButyrivibrio_unclassified-0.1211.57e-071e-06
phylumActinobacteria-0.1211.67e-071.04e-06
classActinobacteria-0.1211.67e-071.04e-06
genusRoseburia-0.122.05e-071.26e-06
genusRuminococcaceae_noname-0.1192.43e-071.45e-06
speciesRuminococcaceae_bacterium_D16-0.1192.43e-071.45e-06
speciesAlistipes_finegoldii-0.1192.51e-071.48e-06
speciesBifidobacterium_longum-0.1183.35e-071.95e-06
speciesBacteroides_uniformis-0.1164.69e-072.7e-06
genusPeptostreptococcaceae_noname-0.1155.56e-073.16e-06
genusRuminococcus-0.1131e-065.61e-06
speciesCoprobacillus_unclassified0.1131.01e-065.61e-06
speciesLachnospiraceae_bacterium_6_1_63FAA0.1111.61e-068.84e-06
speciesEubacterium_hallii-0.112e-061.09e-05
speciesAlistipes_putredinis-0.1092.16e-061.16e-05
speciesOlsenella_unclassified-0.1092.37e-061.26e-05
speciesDorea_longicatena-0.1082.81e-061.47e-05
speciesClostridium_bolteae0.1073.28e-061.7e-05
speciesLachnospiraceae_bacterium_1_4_56FAA0.1073.35e-061.72e-05
speciesTuricibacter_unclassified-0.1073.39e-061.72e-05
genusLachnospiraceae_noname-0.1073.89e-061.95e-05
speciesAlistipes_sp_AP11-0.1064.65e-062.31e-05
speciesEubacterium_rectale-0.1064.79e-062.36e-05
genusTuricibacter-0.1055.11e-062.49e-05
speciesLachnospiraceae_bacterium_3_1_46FAA-0.1055.69e-062.74e-05
speciesAnaerostipes_hadrus-0.1046.05e-062.88e-05
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.1046.42e-063.03e-05
speciesBacteroides_pectinophilus-0.1046.5e-063.04e-05
speciesClostridium_clostridioforme0.1046.57e-063.04e-05
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1038.33e-063.82e-05
genusOlsenella-0.1029.7e-064.4e-05
speciesBifidobacterium_adolescentis-0.1021.05e-054.72e-05
speciesErysipelotrichaceae_bacterium_21_3-0.1011.19e-055.3e-05
genusDorea-0.11.52e-056.71e-05
speciesCoprococcus_comes-0.0991.63e-057.12e-05
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0991.85e-058.01e-05
speciesClostridiales_bacterium_1_7_47FAA0.0991.88e-058.07e-05
genusDesulfovibrio-0.0982.38e-050.0001
speciesPeptostreptococcaceae_noname_unclassified-0.0982.38e-050.0001
speciesClostridium_sp_L2_50-0.0962.94e-050.000123
speciesAnaerostipes_unclassified0.0963.11e-050.000129
speciesClostridium_bartlettii-0.0963.37e-050.000138
speciesAlistipes_indistinctus-0.0944.99e-050.000203
speciesEubacterium_cylindroides-0.0935.3e-050.000214
speciesDesulfovibrio_desulfuricans-0.0936.04e-050.000242
speciesClostridium_ramosum0.0918.59e-050.000341
speciesCoprococcus_eutactus-0.0918.78e-050.000345
speciesRuminococcus_champanellensis-0.099.17e-050.000358
speciesEubacterium_ramulus-0.0890.0001270.000491
genusMethanosphaera-0.0880.0001450.000552
speciesMethanosphaera_stadtmanae-0.0880.0001450.000552
genusCoprobacillus0.0880.000150.000566
genusAdlercreutzia-0.0860.0001960.000728
speciesAdlercreutzia_equolifaciens-0.0860.0001960.000728
speciesRoseburia_intestinalis-0.0840.0002550.00094
speciesClostridium_leptum-0.0840.0002590.000948
speciesEscherichia_unclassified-0.0840.0002920.00106
speciesEubacterium_dolichum0.0820.0003920.00141
speciesTuricibacter_sanguinis-0.0810.0004220.00151
speciesClostridium_citroniae0.0810.0004550.00161
genusPorphyromonas-0.0810.0004680.00165
speciesParabacteroides_goldsteinii-0.0780.0007040.00246
speciesCollinsella_aerofaciens-0.0770.0009210.0032
classBacilli-0.0760.001070.00369
speciesBifidobacterium_dentium-0.0750.00110.00376
speciesFusobacterium_nucleatum-0.0740.001340.00455
orderActinomycetales-0.0740.001380.00465
genusCollinsella-0.0740.001410.00472
speciesBacteroides_salanitronis-0.0740.001460.00485
speciesBacteroides_intestinalis-0.0720.001730.00571
speciesDorea_formicigenerans-0.0720.001750.00574
orderLactobacillales-0.0720.001920.00625
genusEscherichia-0.0710.002170.00702
speciesRuminococcus_torques-0.0710.002290.00729
genusParasutterella-0.070.00230.00729
speciesParasutterella_excrementihominis-0.070.00230.00729
genusButyricimonas-0.070.002420.00756
speciesButyricimonas_synergistica-0.070.002420.00756
orderCoriobacteriales-0.070.002470.00762
familyCoriobacteriaceae-0.070.002470.00762
speciesCampylobacter_concisus-0.070.002540.00778
speciesLachnospiraceae_bacterium_5_1_57FAA0.0690.002740.00834
orderEnterobacteriales-0.0690.002870.00863
familyEnterobacteriaceae-0.0690.002870.00863
genusBurkholderiales_noname-0.0690.002940.00873
speciesBurkholderiales_bacterium_1_1_47-0.0690.002940.00873
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0690.002970.00876
genusFlavonifractor0.0680.003070.00894
speciesFlavonifractor_plautii0.0680.003070.00894
speciesClostridium_symbiosum0.0680.003160.00915
familyBurkholderiales_noname-0.0670.003580.0103
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0670.003710.0106
genusAnaerostipes-0.0660.004360.0124
genusCampylobacter-0.0650.004690.0133
speciesRoseburia_inulinivorans-0.0650.004950.0139
genusAcidaminococcaceae_unclassified-0.0650.005110.0143
speciesEggerthella_sp_1_3_56FAA0.0650.005140.0143
genusBlautia-0.0640.005280.0146
speciesHoldemania_filiformis-0.0640.005550.0152
familyStreptococcaceae-0.0640.005620.0153
familyCampylobacteraceae-0.0640.006020.0163
genusStreptococcus-0.0620.007060.019
speciesBacteroides_fragilis-0.0620.00740.0198
speciesEggerthella_unclassified0.0620.007580.0202
speciesEscherichia_coli-0.0620.007620.0202
speciesBlautia_hydrogenotrophica0.0610.008440.0223
speciesStreptococcus_salivarius-0.060.009680.0254
speciesLachnospiraceae_bacterium_2_1_58FAA0.060.009840.0257
speciesEubacterium_sp_3_1_310.0590.01060.0273
speciesBacteroides_dorei-0.0590.01060.0273
speciesMegasphaera_micronuciformis-0.0590.01120.0287
speciesEubacterium_ventriosum-0.0580.01230.0314
familyMicrococcaceae-0.0580.01270.0322
speciesPorphyromonas_asaccharolytica-0.0580.01280.0323
genusEggerthella0.0570.0130.0326
genusRothia-0.0570.01350.0335
speciesBacteroides_xylanisolvens0.0570.01350.0335
classGammaproteobacteria-0.0560.01460.0361
orderPasteurellales-0.0560.01630.0399
familyPasteurellaceae-0.0560.01630.0399
classDeltaproteobacteria-0.0550.01690.0407
orderDesulfovibrionales-0.0550.01690.0407
familyDesulfovibrionaceae-0.0550.01690.0407
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speciesBifidobacterium_pseudocatenulatum-0.0420.06740.13
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speciesOscillibacter_sp_KLE_17280.0420.0710.136
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speciesBacteroides_thetaiotaomicron0.0410.07980.152
genusLactobacillus-0.040.08130.154
genusClostridiales_noname0.040.08160.154
familyBacteroidaceae0.040.08250.155
genusBacteroides0.040.08250.155
speciesCoprobacillus_sp_29_1-0.040.08450.158
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speciesLachnospiraceae_bacterium_2_1_46FAA0.040.08620.16
speciesErysipelotrichaceae_bacterium_3_1_530.040.08660.16
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speciesAcidaminococcus_unclassified0.040.08740.16
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speciesClostridium_nexile0.0390.09180.165
speciesLactobacillus_fermentum-0.0390.09320.166
speciesLactobacillus_mucosae-0.0390.09340.166
speciesFusobacterium_varium0.0390.09550.169
genusBilophila-0.0380.09990.177
speciesLactobacillus_gasseri-0.0380.1010.178
speciesParabacteroides_sp_20_3-0.0380.1030.181
speciesMegamonas_rupellensis0.0380.1040.182
speciesClostridium_perfringens-0.0370.1090.19
speciesBacteroides_sp_2_1_220.0370.1130.196
speciesEnterobacteria_phage_HK5440.0370.1140.197
speciesWeissella_confusa-0.0360.1150.197
speciesSutterella_wadsworthensis0.0360.1150.197
speciesStreptococcus_parasanguinis-0.0360.1190.204
familyPropionibacteriaceae0.0360.120.204
speciesBilophila_unclassified-0.0360.1210.205
speciesWeissella_cibaria-0.0360.1220.206
speciesFusobacterium_ulcerans0.0360.1230.207
speciesLactococcus_phage_936_sensu_lato-0.0360.1240.208
speciesKlebsiella_oxytoca-0.0350.130.218
familyClostridiaceae-0.0350.1330.222
familyLeuconostocaceae-0.0350.1340.222
speciesRoseburia_unclassified-0.0350.1340.222
genusActinobacillus-0.0340.1360.223
speciesActinobacillus_unclassified-0.0340.1360.223
speciesBacteroides_sp_1_1_6-0.0350.1360.223
speciesOdoribacter_unclassified-0.0340.1370.224
genusClostridium-0.0340.1390.226
speciesPorphyromonas_uenonis-0.0340.1420.23
genusSiphoviridae_noname-0.0340.1430.231
speciesParabacteroides_sp_D13-0.0340.1480.238
speciesLactococcus_phage_phi7-0.0330.1580.254
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speciesLactobacillus_rhamnosus0.0320.1640.262
speciesCollinsella_tanakaei0.0320.1670.265
speciesEggerthella_lenta0.0320.170.269
speciesParaprevotella_xylaniphila0.0320.1720.272
genusParaprevotella0.0320.1730.272
speciesHoldemania_sp_AP20.0310.1750.274
speciesCoriobacteriaceae_bacterium_phI-0.0310.1750.274
speciesBacteroides_oleiciplenus-0.0310.1760.274
speciesOscillibacter_unclassified-0.0310.1810.281
speciesParaprevotella_unclassified0.0310.1830.283
genusClostridiaceae_noname0.0310.1870.288
speciesClostridiaceae_bacterium_JC1180.0310.1870.288
orderBacillales-0.030.1920.294
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speciesBacteroides_caccae-0.0290.2030.309
familyBacillales_noname-0.0290.2050.31
genusGemella-0.0290.2050.31
genusCatenibacterium0.0280.2210.332
speciesCatenibacterium_mitsuokai0.0280.2210.332
speciesClostridium_hathewayi-0.0280.2230.334
speciesStreptococcus_pasteurianus-0.0270.2350.351
orderPseudomonadales-0.0270.2380.354
genusPhascolarctobacterium0.0270.2430.358
speciesOscillibacter_sp_KLE_17450.0270.2430.358
speciesPhascolarctobacterium_succinatutens0.0270.2430.358
phylumProteobacteria-0.0260.2520.371
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0260.2540.372
speciesClostridium_sp_ATCC_BAA_4420.0260.2590.378
speciesHaemophilus_paraphrohaemolyticus-0.0260.2670.389
speciesMegamonas_hypermegale0.0250.2760.401
speciesParaprevotella_clara0.0250.2770.401
speciesStreptococcus_lutetiensis-0.0250.2810.406
speciesBifidobacterium_breve0.0250.2830.407
speciesBacteroides_faecis0.0250.2890.415
speciesBacteroides_barnesiae-0.0240.2930.419
speciesVeillonella_parvula-0.0240.2960.422
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0240.2980.423
familyOscillospiraceae-0.0240.2990.423
genusOscillibacter-0.0240.2990.423
speciesClostridium_spiroforme0.0240.30.423
speciesAggregatibacter_segnis-0.0240.3010.423
speciesStreptococcus_vestibularis-0.0240.3020.423
speciesStreptococcus_gordonii-0.0240.3060.427
speciesBacteroides_coprophilus0.0240.3070.427
speciesVeillonella_unclassified-0.0230.3130.435
genusSutterellaceae_unclassified-0.0230.3190.442
speciesBacteroides_salyersiae-0.0230.3210.443
speciesSutterella_parvirubra0.0220.3310.455
speciesProteus_mirabilis-0.0220.3380.464
speciesLactococcus_lactis-0.0220.3410.467
speciesStreptococcus_sanguinis-0.0220.3440.469
familyMyoviridae0.0220.3470.472
speciesLeuconostoc_lactis-0.0220.3490.473
speciesDesulfovibrio_piger-0.0220.350.473
speciesBacteroides_vulgatus-0.0220.3520.475
speciesBifidobacterium_animalis0.0210.3530.475
genusMyoviridae_noname0.0210.3540.475
genusEnterococcus-0.0210.3550.475
genusPeptostreptococcus-0.0210.3580.476
speciesParabacteroides_johnsonii-0.0210.3580.476
genusLeuconostoc-0.0210.3660.485
genusDialister-0.0210.3670.485
speciesMitsuokella_multacida0.0210.370.488
speciesFusobacterium_mortiferum0.020.3780.497
speciesCollinsella_intestinalis0.020.3840.503
speciesVeillonella_atypica-0.020.390.51
speciesBacteroides_fluxus-0.020.3950.515
speciesBacteroides_sp_3_1_190.0190.4030.524
speciesLactococcus_phage_bIL670.0180.4240.55
familyFusobacteriaceae0.0180.4270.552
speciesDialister_invisus-0.0180.4380.564
genusFusobacterium0.0180.440.564
speciesCollinsella_unclassified-0.0180.440.564
familyEnterococcaceae-0.0180.4420.565
speciesSlackia_piriformis0.0180.4430.565
phylumFusobacteria0.0170.4520.572
classFusobacteriia0.0170.4520.572
orderFusobacteriales0.0170.4520.572
speciesParabacteroides_merdae-0.0170.4570.575
speciesPrevotella_bivia-0.0170.4580.575
speciesStreptococcus_mutans-0.0170.4580.575
speciesVeillonella_dispar-0.0170.4620.575
phylumSynergistetes-0.0170.4640.575
classSynergistia-0.0170.4640.575
orderSynergistales-0.0170.4640.575
familySynergistaceae-0.0170.4640.575
genusVeillonella-0.0170.4650.575
speciesBacteroides_clarus-0.0170.470.579
familyVeillonellaceae-0.0170.4740.582
speciesKlebsiella_phage_KP36-0.0160.4760.582
speciesClostridium_sp_KLE_17550.0160.4760.582
speciesRuminococcus_sp_JC304-0.0160.4890.596
speciesLactobacillus_acidophilus0.0160.4920.599
speciesAcidaminococcus_intestini-0.0160.5010.607
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0150.5040.607
speciesStreptococcus_australis-0.0150.5040.607
speciesMegasphaera_unclassified0.0150.5040.607
speciesStreptococcus_infantarius-0.0150.5110.614
classErysipelotrichia-0.0150.5290.631
orderErysipelotrichales-0.0150.5290.631
familyErysipelotrichaceae-0.0150.5290.631
orderAeromonadales-0.0140.5320.633
genusSolobacterium-0.0140.5380.636
speciesSolobacterium_moorei-0.0140.5380.636
genusPeptoniphilus-0.0140.5440.642
speciesDialister_succinatiphilus-0.0130.5610.66
speciesLactobacillus_casei_paracasei-0.0130.5850.686
speciesBacteroides_massiliensis0.0130.5860.686
familyAcidaminococcaceae-0.0120.5910.69
speciesCoprobacillus_sp_D6-0.0120.6130.714
genusSuccinatimonas0.0120.6170.716
speciesSuccinatimonas_hippei0.0120.6170.716
genusMegasphaera-0.0110.6230.721
speciesParvimonas_unclassified-0.0110.6270.724
genusParvimonas-0.0110.630.725
orderViruses_noname-0.0110.6350.729
speciesLactobacillus_plantarum-0.0110.6480.742
genusLactococcus-0.010.6520.745
speciesHaemophilus_sputorum-0.010.6570.749
genusC2likevirus0.010.660.751
speciesAlistipes_unclassified-0.010.6620.751
familySuccinivibrionaceae0.010.6810.769
speciesStreptococcus_phage_Sfi210.010.6810.769
familyClostridiales_noname-0.0090.6920.779
speciesBacteroides_finegoldii0.0090.6930.779
speciesBifidobacterium_bifidum0.0090.7060.792
speciesPropionibacterium_freudenreichii-0.0090.7110.793
speciesLactobacillus_amylovorus0.0090.7110.793
speciesLactobacillus_ruminis-0.0080.7150.796
genusTunalikevirus-0.0080.7260.806
speciesKlebsiella_sp_MS_92_3-0.0080.7280.807
speciesKlebsiella_pneumoniae0.0080.7360.814
speciesStreptococcus_anginosus-0.0080.740.816
genusSlackia0.0070.7470.822
familySiphoviridae-0.0070.7530.827
speciesStreptococcus_thermophilus-0.0070.7580.83
speciesKlebsiella_unclassified-0.0070.7640.835
speciesLactobacillus_vaginalis0.0070.7660.835
genusEnterobacter-0.0070.7780.846
speciesLactobacillus_reuteri0.0060.7830.85
genusPantoea-0.0060.7940.855
speciesPantoea_unclassified-0.0060.7940.855
speciesLactobacillus_sanfranciscensis-0.0060.7940.855
speciesEubacterium_biforme0.0060.7950.855
speciesLactococcus_phage_jm2-0.0060.8030.861
speciesBacteroides_eggerthii-0.0060.8090.866
speciesC2likevirus_unclassified0.0050.8130.868
speciesBacteroides_sp_4_3_47FAA-0.0050.8150.868
speciesBifidobacterium_angulatum0.0050.8180.87
speciesEnterobacter_cloacae-0.0050.8250.872
classNegativicutes-0.0050.8290.872
orderSelenomonadales-0.0050.8290.872
genusMorganella-0.0050.8320.872
speciesMorganella_morganii-0.0050.8320.872
genusKlebsiella0.0050.8330.872
familyStaphylococcaceae-0.0050.8360.872
speciesPeptostreptococcus_anaerobius0.0050.8380.872
speciesStreptococcus_mitis_oralis_pneumoniae0.0050.840.872
speciesEnterococcus_faecalis-0.0050.840.872
genusAcidaminococcus0.0050.8410.872
genusStaphylococcus-0.0040.8460.876
familyPodoviridae0.0040.8510.879
phylumViruses_noname-0.0040.8550.879
classViruses_noname-0.0040.8550.879
speciesLactococcus_garvieae0.0040.8580.88
speciesRuminococcus_sp_5_1_39BFAA0.0030.8860.906
genusErysipelotrichaceae_noname-0.0030.8870.906
speciesEubacterium_limosum0.0030.8890.906
speciesLactobacillus_delbrueckii-0.0030.9050.921
speciesParabacteroides_distasonis-0.0030.9130.927
genusPyramidobacter-0.0020.9230.932
speciesPyramidobacter_piscolens-0.0020.9230.932
speciesEnterobacter_aerogenes0.0020.9240.932
familyClostridiales_Family_XI_Incertae_Sedis-0.0010.9490.955
speciesAnaerotruncus_colihominis0.0010.9510.955
orderCaudovirales0.0010.9810.982
genusPropionibacterium0.0010.9820.982
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesSweden53920.1327572825320.1070062158850.007171602149852930.992211
ObesityDenmark1691230.1254485096140.100496697720.011133723184624998.21742
Crohns diseaseSpain17660.1509819639070.1296736298090.04766947811481133737.6958
Colorectal cancerAustria64350.1321647016760.1351804094740.3897824611671477349.9831
Liver cirrhosisChina1201140.1380185193030.1315540902320.7473167235652719091.3366
Rheumatoid arthritisChina127980.1234436285670.1217913494750.7859211869862455281.8755
Type II diabetesDenmark752770.1159867878120.1156396213950.8808641435572823692.5558
Type II diabetesChina1831850.1480621385030.1594362832430.9155806743842876495.0593
Ulcerative colitisSpain78660.127722015290.1296736298090.9917583114573015899.4854
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382