MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:00:16 PST
Job id & description: 2387, purine7
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
DOM025_GL00358123212086CompleteK05810NOG134282BacteroidetesBacteroides100.0100.0100.0
MH0107_GL01143873201258CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC36-0_GL00031133211136CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0026_GL00137783200256CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0272_GL01477583203933CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0283_GL00832133204158CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0442_GL01482903223191Lack 3'-endK05810COG1496Firmicutesunknown100.0100.0100.0
O2.UC12-2_GL00321343207707CompleteK05810COG1496unknownunknown100.0100.0100.0
765620695-stool1_revised3231146CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
MH0002_GL00763803215612CompleteK05810NOG134282BacteroidetesBacteroides100.0100.0100.0
MH0356_GL00934233205147Lack 5'-endK00772COG0005unknownunknown100.0100.0100.0
DOM022_GL00904963212081CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0191_GL00925053234592Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
MH0253_GL01091503203631CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0088_GL00010953200890CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0206_GL01469443218984CompleteK00772COG0005unknownunknown100.0100.0100.0
HT14A_GL00292063229846CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0087_GL00431363200889CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0442_GL01481963223190CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
158944319-stool1_revised3230258CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0057_GL00108713232484CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0330_GL00307573220818CompleteK05810COG1496unknownunknown100.0100.0100.0
T2D-13A_GL00434313229245CompleteK05810COG1496unknownunknown100.0100.0100.0
DLM010_GL00354953227867CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
MH0272_GL01303673203930CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0276_GL02017463220073CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
MH0319_GL00805193220670CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
MH0360_GL00043663205276Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0370_GL01367783205524CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC32-1_GL00478713224342CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
556261.HMPREF0240_035673215444CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
MH0006_GL00242913215685CompleteK05810COG1496FirmicutesPhascolarctobacterium100.0100.0100.0
MH0060_GL00387493216482CompleteK03783COG0005FirmicutesFaecalibacterium100.0100.0100.0
MH0229_GL01867143219257CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0243_GL00634213203429Lack 5'-endK03783COG0005BacteroidetesAlistipes100.0100.0100.0
MH0274_GL01144453203968CompleteK05810COG1496BacteroidetesParabacteroides100.0100.0100.0
MH0359_GL01740233205274Lack 5'-endK03783COG0005BacteroidetesAlistipes100.0100.0100.0
O2.CD2-0-PT_GL00478803207549CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
V1.CD21-0_GL00715513225315CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD7-4_GL00493753209903CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
575611.HMPREF0649_003413231512CompleteK03783COG0005BacteroidetesPrevotella100.0100.0100.0
MH0050_GL00107963232364CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0086_GL00439313200861CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0092_GL00376713200961CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0131_GL01139143217585CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0193_GL01826193218697CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0006_GL01055813231772CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0238_GL01628493219375CompleteK00772COG0005FirmicutesAcidaminococcus100.0100.0100.0
MH0239_GL00373553203380CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0447_GL01711983207209CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD46-0_GL00985283225727CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
V1.CD55-0_GL00860333209795CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0274_GL01171913203969CompleteK03783COG0005BacteroidetesParabacteroides100.0100.0100.0
MH0303_GL00523133204316Lack 5'-endK05810COG1496FirmicutesMegasphaera100.0100.0100.0
V1.CD20-4_GL01682153225283CompleteK00777COG2820unknownunknown100.0100.0100.0
553973.CLOHYLEM_042783215441CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
MH0020_GL00645143216062CompleteK03783COG0005BacteroidetesBacteroides100.0100.0100.0
MH0137_GL00894503201706CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0169_GL00470263202223CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC11-1_GL00986053223753CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC40-1_GL01273193208423CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-19A_GL00843113213338CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC55-0_GL02461843227591CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0357_GL00741153221294CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0406_GL02189493222408CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD3-3-PN_GL00420413225535CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.FI04_GL02181283226061Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
160765029-stool1_revised3230648CompleteK03783COG0005unknownunknown100.0100.0100.0
457396.CSBG_014653231381CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
MH0229_GL00007003219214CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC35-0_GL00465223208301CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC44-2_GL00573173208556Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
V1.CD25-4_GL01060233225365CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.FI04_GL00092933209965CompleteK05810COG1496unknownunknown100.0100.0100.0
445972.ANACOL_009173231374CompleteK03783COG0005FirmicutesAnaerotruncus100.0100.0100.0
MH0297_GL01014013220332CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0372_GL00874603221670CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0012_GL01908873232000CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0020_GL00099033232085CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0012_GL01599313231982CompleteK03783COG0005BacteroidetesOdoribacter100.0100.0100.0
MH0047_GL00400853232356CompleteK03783;K03815COG0005unknownunknown100.0100.0100.0
MH0011_GL00546573231897CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0384_GL01195043205870CompleteK03783COG0005unknownunknown100.0100.0100.0
768724.HMPREF9131_02973231577CompleteK03783COG0005FirmicutesPeptoniphilus100.0100.0100.0
MH0150_GL00432653233956CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0203_GL02199763202896CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC24-1_GL00601483224134CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC48-0_GL01268813224723CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD43-0_GL00778783209640CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0006_GL01190943215733CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0175_GL00633713218252CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0009_GL00578923215820CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0131_GL00172873201603CompleteK03783COG0005ProteobacteriaDesulfovibrio100.0100.0100.0
V1.FI20_GL00692103210409CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC17-2_GL00446343226920CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0011_GL00400913215852CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0071_GL00001233216611CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0009_GL00528073215816CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0012_GL00911563215935CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0189_GL01321553218568CompleteK03783COG0005unknownunknown100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesBacteroides_uniformis0.4956.63e-1163.13e-113
familyPorphyromonadaceae0.4442.97e-917.01e-89
familyBacteroidaceae0.4382.27e-882.68e-86
genusBacteroides0.4382.27e-882.68e-86
genusParabacteroides0.4191.41e-801.33e-78
familyRikenellaceae0.4115.49e-773.7e-75
genusAlistipes0.4115.49e-773.7e-75
familyOscillospiraceae0.419.42e-774.94e-75
genusOscillibacter0.419.42e-774.94e-75
speciesOscillibacter_unclassified0.3861.55e-677.32e-66
phylumBacteroidetes0.3619.82e-593.63e-57
classBacteroidia0.3619.99e-593.63e-57
orderBacteroidales0.3619.99e-593.63e-57
genusOdoribacter0.3323.09e-491.04e-47
speciesOdoribacter_splanchnicus0.3282.79e-488.78e-47
speciesAlistipes_onderdonkii0.3247.97e-472.35e-45
classBacilli-0.3152.64e-447.33e-43
orderLactobacillales-0.3136.51e-441.71e-42
speciesClostridium_asparagiforme0.285.55e-351.38e-33
familyStreptococcaceae-0.2772.42e-345.71e-33
genusStreptococcus-0.2733.14e-337.06e-32
speciesLachnospiraceae_bacterium_7_1_58FAA0.2684.91e-321.05e-30
speciesBacteroides_cellulosilyticus0.2661.42e-312.91e-30
speciesBacteroides_thetaiotaomicron0.2621.02e-302.01e-29
phylumFirmicutes-0.2589.65e-301.82e-28
classDeltaproteobacteria0.2531.32e-282.15e-27
orderDesulfovibrionales0.2531.32e-282.15e-27
familyClostridiales_noname0.2531.32e-282.15e-27
familyDesulfovibrionaceae0.2531.32e-282.15e-27
speciesStreptococcus_salivarius-0.2512.49e-283.92e-27
speciesPrevotella_copri-0.2471.69e-272.57e-26
speciesAnaerotruncus_colihominis0.2472.08e-273.07e-26
genusLactobacillus-0.2472.35e-273.36e-26
familyLactobacillaceae-0.2463.25e-274.51e-26
speciesClostridium_citroniae0.2413.84e-265.18e-25
speciesBacteroides_ovatus0.2391.13e-251.48e-24
speciesAlistipes_putredinis0.2382.09e-252.67e-24
speciesStreptococcus_sanguinis-0.2357.05e-258.76e-24
familyActinomycetaceae-0.2349.04e-251.09e-23
genusActinomyces-0.2331.61e-241.9e-23
genusBilophila0.2322.77e-243.12e-23
speciesBilophila_unclassified0.2322.78e-243.12e-23
speciesStreptococcus_mitis_oralis_pneumoniae-0.2291.21e-231.33e-22
orderBifidobacteriales-0.2272.36e-232.48e-22
familyBifidobacteriaceae-0.2272.36e-232.48e-22
phylumActinobacteria-0.2272.55e-232.56e-22
classActinobacteria-0.2272.55e-232.56e-22
genusBifidobacterium-0.2273.14e-233.09e-22
genusHoldemania0.2241.12e-221.08e-21
genusFlavonifractor0.2222.39e-222.21e-21
speciesFlavonifractor_plautii0.2222.39e-222.21e-21
speciesAlistipes_shahii0.227.53e-226.83e-21
speciesStreptococcus_parasanguinis-0.2181.83e-211.63e-20
genusDorea-0.2172.59e-212.26e-20
genusAnaerotruncus0.2163.7e-213.18e-20
familyPeptostreptococcaceae-0.2131.11e-209.36e-20
speciesAlistipes_finegoldii0.2131.26e-201.04e-19
orderActinomycetales-0.2112.99e-202.43e-19
speciesClostridiales_bacterium_1_7_47FAA0.2096.13e-204.9e-19
genusClostridiales_noname0.2081.17e-199.2e-19
speciesBilophila_wadsworthia0.2054.1e-193.17e-18
genusPeptostreptococcaceae_noname-0.2038.99e-196.84e-18
genusPrevotella-0.2011.76e-181.32e-17
speciesDorea_longicatena-0.1942.73e-172.01e-16
speciesBacteroides_xylanisolvens0.1934.09e-172.97e-16
familyBacillales_noname-0.1925.34e-173.76e-16
genusGemella-0.1925.34e-173.76e-16
speciesStreptococcus_mutans-0.1925.88e-174.08e-16
orderBacillales-0.1918.35e-175.71e-16
familyBacteroidales_noname0.1891.7e-161.11e-15
genusBacteroidales_noname0.1891.7e-161.11e-15
speciesBacteroidales_bacterium_ph80.1891.7e-161.11e-15
speciesStreptococcus_vestibularis-0.184.45e-152.86e-14
speciesStreptococcus_anginosus-0.184.49e-152.86e-14
speciesDorea_formicigenerans-0.1788.1e-155.1e-14
speciesCollinsella_aerofaciens-0.1789.62e-155.97e-14
speciesStreptococcus_gordonii-0.1752.26e-141.39e-13
speciesBacteroides_nordii0.1752.35e-141.42e-13
familyLachnospiraceae-0.1752.67e-141.6e-13
speciesBifidobacterium_dentium-0.1726.2e-143.64e-13
speciesBacteroides_dorei0.1726.24e-143.64e-13
speciesOscillibacter_sp_KLE_17450.1727.27e-144.18e-13
genusErysipelotrichaceae_noname-0.1682.5e-131.42e-12
speciesBifidobacterium_longum-0.1682.98e-131.67e-12
genusCollinsella-0.1673.44e-131.91e-12
speciesBacteroides_intestinalis0.1664.44e-132.44e-12
speciesRothia_mucilaginosa-0.1656.73e-133.65e-12
speciesClostridium_hathewayi0.1656.81e-133.65e-12
speciesAlistipes_indistinctus0.1648.47e-134.49e-12
speciesBifidobacterium_adolescentis-0.1648.56e-134.49e-12
speciesParabacteroides_distasonis0.1649.39e-134.87e-12
speciesBacteroides_vulgatus0.1649.5e-134.87e-12
genusButyricimonas0.1631.39e-126.98e-12
speciesButyricimonas_synergistica0.1631.39e-126.98e-12
genusRothia-0.1621.75e-128.69e-12
familyMicrococcaceae-0.1612.15e-121.06e-11
genusBlautia-0.1612.34e-121.14e-11
speciesParabacteroides_unclassified0.1586.87e-123.31e-11
familyPrevotellaceae-0.1578.78e-124.19e-11
speciesClostridium_bolteae0.1579.22e-124.35e-11
orderCoriobacteriales-0.1561.18e-115.46e-11
familyCoriobacteriaceae-0.1561.18e-115.46e-11
speciesHoldemania_filiformis0.1551.47e-116.74e-11
genusSolobacterium-0.1541.94e-118.72e-11
speciesSolobacterium_moorei-0.1541.94e-118.72e-11
speciesAlistipes_sp_AP110.1542.02e-118.99e-11
speciesParabacteroides_merdae0.1532.62e-111.16e-10
speciesAlistipes_senegalensis0.1515.66e-112.47e-10
speciesEubacterium_biforme-0.156.4e-112.77e-10
genusVeillonella-0.156.95e-112.98e-10
genusPseudoflavonifractor0.157.08e-112.98e-10
speciesPseudoflavonifractor_capillosus0.157.08e-112.98e-10
speciesDesulfovibrio_desulfuricans0.157.31e-113.05e-10
classClostridia-0.157.54e-113.1e-10
orderClostridiales-0.157.55e-113.1e-10
classErysipelotrichia-0.1499.88e-113.95e-10
orderErysipelotrichales-0.1499.88e-113.95e-10
familyErysipelotrichaceae-0.1499.88e-113.95e-10
speciesStreptococcus_australis-0.1462.01e-107.97e-10
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1452.66e-101.05e-09
speciesLactobacillus_gasseri-0.1452.82e-101.1e-09
genusClostridiaceae_noname0.1453.02e-101.16e-09
speciesClostridiaceae_bacterium_JC1180.1453.02e-101.16e-09
speciesRuminococcus_obeum-0.1453.3e-101.26e-09
speciesLachnospiraceae_bacterium_5_1_63FAA-0.1443.79e-101.42e-09
genusPeptostreptococcus-0.1443.8e-101.42e-09
speciesBacteroides_caccae0.1444.54e-101.69e-09
speciesVeillonella_unclassified-0.1426.12e-102.26e-09
genusOlsenella-0.1418.62e-103.15e-09
orderBurkholderiales0.1419.38e-103.41e-09
speciesBacteroides_coprocola-0.1391.41e-095.08e-09
classGammaproteobacteria-0.1391.49e-095.33e-09
speciesCoprococcus_comes-0.1391.67e-095.93e-09
familyLeuconostocaceae-0.1391.71e-096.02e-09
classBetaproteobacteria0.1382.14e-097.48e-09
speciesAnaerostipes_hadrus-0.1382.24e-097.77e-09
speciesClostridium_symbiosum0.1363.25e-091.12e-08
speciesBacteroides_plebeius-0.1354.46e-091.53e-08
speciesLactobacillus_fermentum-0.1345.89e-092e-08
genusRuminococcaceae_noname0.1346.24e-092.09e-08
speciesRuminococcaceae_bacterium_D160.1346.24e-092.09e-08
speciesClostridium_leptum0.1337.23e-092.4e-08
speciesClostridium_bartlettii-0.1338.2e-092.71e-08
speciesVeillonella_parvula-0.1329.93e-093.25e-08
speciesPeptostreptococcus_stomatis-0.1321.08e-083.52e-08
speciesVeillonella_atypica-0.1311.19e-083.85e-08
speciesHoldemania_unclassified0.131.76e-085.64e-08
familyVeillonellaceae-0.131.77e-085.64e-08
speciesLactobacillus_rhamnosus-0.1282.72e-088.62e-08
genusAnaerostipes-0.1283.11e-089.78e-08
speciesBacteroides_fragilis0.1283.13e-089.78e-08
speciesAnaerotruncus_unclassified0.1273.6e-081.12e-07
speciesLactobacillus_casei_paracasei-0.1264.93e-081.52e-07
speciesCoprococcus_catus-0.1265.04e-081.54e-07
genusEnterococcus-0.1255.23e-081.59e-07
familyEnterococcaceae-0.1255.77e-081.75e-07
speciesEubacterium_hallii-0.1256.56e-081.97e-07
genusSubdoligranulum0.1247.02e-082.1e-07
speciesRoseburia_hominis0.1247.11e-082.11e-07
speciesClostridium_clostridioforme0.1248.4e-082.48e-07
genusCoprococcus-0.1239.5e-082.79e-07
speciesRuminococcus_sp_5_1_39BFAA-0.1239.62e-082.8e-07
speciesLactobacillus_mucosae-0.1239.96e-082.88e-07
genusDesulfovibrio0.1221.21e-073.48e-07
speciesParabacteroides_goldsteinii0.1221.22e-073.49e-07
classNegativicutes-0.1221.3e-073.67e-07
orderSelenomonadales-0.1221.3e-073.67e-07
speciesOlsenella_unclassified-0.1211.49e-074.19e-07
speciesSubdoligranulum_unclassified0.1211.55e-074.33e-07
genusMegasphaera-0.121.86e-075.16e-07
speciesEubacterium_sp_3_1_310.122.13e-075.88e-07
speciesClostridium_perfringens-0.122.18e-075.98e-07
speciesWeissella_cibaria-0.1182.86e-077.8e-07
genusKlebsiella-0.1183.29e-078.92e-07
familySutterellaceae0.1183.34e-079.01e-07
speciesAggregatibacter_segnis-0.1173.66e-079.82e-07
speciesLachnospiraceae_bacterium_3_1_46FAA0.1155.68e-071.51e-06
speciesOscillibacter_sp_KLE_17280.1156.64e-071.76e-06
speciesPeptostreptococcaceae_noname_unclassified-0.1147.14e-071.88e-06
orderEnterobacteriales-0.1148.31e-072.17e-06
familyEnterobacteriaceae-0.1148.31e-072.17e-06
genusLeuconostoc-0.1139.98e-072.59e-06
genusParasutterella0.111.84e-064.72e-06
speciesParasutterella_excrementihominis0.111.84e-064.72e-06
genusWeissella-0.1082.66e-066.79e-06
genusPropionibacterium-0.1082.69e-066.83e-06
genusRuminococcus-0.1082.8e-067.07e-06
speciesGemella_morbillorum-0.1073.37e-068.46e-06
genusCatenibacterium-0.1073.91e-069.71e-06
speciesCatenibacterium_mitsuokai-0.1073.91e-069.71e-06
speciesCampylobacter_concisus-0.1064.27e-061.06e-05
genusAggregatibacter-0.1064.57e-061.12e-05
familyBurkholderiales_noname0.1055.54e-061.35e-05
speciesEnterococcus_faecalis-0.1055.9e-061.44e-05
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genusTuricibacter-0.0790.0006460.00121
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speciesDorea_unclassified0.0780.0007150.00131
speciesLachnospiraceae_bacterium_5_1_57FAA0.0780.0007730.00141
speciesEnterobacter_aerogenes-0.0770.0008320.00151
speciesBifidobacterium_pseudocatenulatum-0.0770.0008330.00151
genusPantoea-0.0770.0008690.00156
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speciesLactobacillus_delbrueckii-0.0770.0008750.00156
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speciesBifidobacterium_animalis-0.0730.001640.00288
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speciesLactobacillus_sanfranciscensis-0.0710.002270.00387
speciesEnterobacter_cloacae-0.070.002360.00401
speciesMegamonas_rupellensis-0.070.002590.00438
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speciesMegasphaera_unclassified-0.0670.003630.00608
genusParvimonas-0.0670.003760.00625
speciesParvimonas_unclassified-0.0670.003760.00625
genusFusobacterium-0.0660.004180.00692
speciesLactobacillus_plantarum-0.0650.005070.00834
speciesClostridium_sp_ATCC_BAA_4420.0650.005070.00834
speciesButyrivibrio_unclassified0.0640.005680.00931
speciesTuricibacter_unclassified-0.0630.006290.0103
familyFusobacteriaceae-0.0630.006510.0106
phylumFusobacteria-0.0630.006580.0106
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genusSlackia-0.0620.006930.0111
speciesCitrobacter_unclassified-0.0620.007390.0118
speciesHaemophilus_sputorum-0.0620.007440.0119
speciesErysipelotrichaceae_bacterium_3_1_530.0620.007590.0121
speciesLactobacillus_crispatus-0.0610.008220.013
speciesHoldemania_sp_AP20.060.009280.0146
speciesBacteroides_sp_2_1_220.0590.01040.0164
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speciesEubacterium_eligens0.0580.01190.0186
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speciesCitrobacter_freundii-0.0580.01270.0197
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phylumViruses_noname-0.0560.01490.0228
classViruses_noname-0.0560.01490.0228
speciesAlistipes_sp_HGB50.0560.01550.0236
genusCoprobacillus-0.0550.01680.0255
familyPropionibacteriaceae-0.0550.0180.0272
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speciesClostridium_sp_KLE_17550.0530.0230.0345
genusPyramidobacter0.0520.02380.0354
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speciesBlautia_producta0.050.02930.0432
speciesEscherichia_unclassified-0.0480.03720.0547
speciesBacteroides_barnesiae-0.0480.03780.0554
familyMyoviridae-0.0480.03790.0554
genusGordonibacter0.0480.0390.0566
speciesGordonibacter_pamelaeae0.0480.0390.0566
speciesAcidaminococcus_fermentans-0.0480.03920.0568
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0470.04050.0584
familyCampylobacteraceae-0.0470.04060.0584
speciesLactobacillus_amylovorus-0.0470.0410.0588
speciesBacteroides_coprophilus-0.0470.04360.0624
genusSiphoviridae_noname-0.0470.04420.063
speciesRuminococcus_bromii-0.0460.04480.0637
phylumSynergistetes0.0460.04630.065
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familySynergistaceae0.0460.04630.065
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speciesBlautia_hydrogenotrophica0.0450.04930.0688
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genusViruses_noname-0.0420.06810.0929
speciesFusobacterium_mortiferum-0.0420.0690.0939
speciesCoprobacillus_unclassified-0.0420.07160.0968
speciesMethanobrevibacter_smithii-0.0420.07160.0968
speciesEubacterium_siraeum0.0410.07350.0991
speciesCoriobacteriaceae_bacterium_phI0.0410.07520.101
genusMyoviridae_noname-0.0410.0780.105
speciesBacteroides_sp_1_1_60.0410.080.107
speciesLactobacillus_acidophilus-0.040.08020.107
genusCoriobacteriaceae_noname0.040.08330.111
speciesC2likevirus_unclassified0.040.08630.114
speciesParaprevotella_clara-0.0390.08860.117
speciesEggerthella_unclassified0.0390.0960.127
genusC2likevirus0.0380.09890.13
genusSutterellaceae_unclassified0.0350.1330.174
speciesPeptostreptococcus_anaerobius-0.0350.1350.177
genusMethanobrevibacter-0.0340.1360.177
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speciesCollinsella_intestinalis0.0340.1470.191
speciesSlackia_piriformis-0.0330.1520.197
speciesBacteroides_pectinophilus0.0330.1580.204
speciesEubacterium_dolichum0.0320.1620.208
speciesEggerthella_lenta-0.0320.1640.21
classMethanobacteria-0.0320.1660.211
orderMethanobacteriales-0.0320.1660.211
familyMethanobacteriaceae-0.0320.1660.211
speciesFusobacterium_ulcerans-0.0320.1670.212
genusProteus-0.0320.1690.214
speciesOdoribacter_laneus0.0310.1760.222
speciesCoprobacillus_sp_29_1-0.0310.1760.222
speciesCoprococcus_eutactus-0.0310.1790.225
genusParaprevotella-0.030.1940.243
speciesCollinsella_tanakaei0.030.1970.246
speciesMethanobrevibacter_unclassified0.030.1980.247
phylumEuryarchaeota-0.0290.2030.252
speciesEubacterium_limosum0.0290.2050.254
speciesParaprevotella_unclassified-0.0290.2060.255
genusButyricicoccus0.0290.2140.263
speciesButyricicoccus_pullicaecorum0.0290.2140.263
speciesFusobacterium_varium-0.0290.2150.264
genusEggerthella0.0280.2190.268
speciesEubacterium_rectale-0.0280.2210.27
speciesLachnospiraceae_bacterium_1_4_56FAA0.0280.2250.274
speciesRoseburia_unclassified0.0280.2280.277
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0270.2430.294
speciesBacteroides_fluxus0.0270.2480.299
speciesDialister_invisus0.0270.2490.3
speciesBacteroides_sp_3_1_190.0270.2510.301
speciesRoseburia_intestinalis0.0260.260.311
speciesEubacterium_cylindroides-0.0260.2610.312
speciesKlebsiella_unclassified-0.0260.2630.313
speciesKlebsiella_phage_KP360.0250.270.321
speciesErysipelotrichaceae_bacterium_21_30.0250.2860.339
speciesPrevotella_bivia0.0250.290.343
genusMethanosphaera-0.0240.2980.351
speciesMethanosphaera_stadtmanae-0.0240.2980.351
speciesAcidaminococcus_intestini-0.0230.3190.375
speciesAnaerostipes_unclassified0.0230.3210.376
familyStaphylococcaceae-0.0220.3330.389
genusEubacterium-0.0220.3350.39
familyEubacteriaceae-0.0220.340.395
genusLambdalikevirus-0.0220.3440.399
orderAeromonadales-0.0220.3450.399
speciesAcidaminococcus_unclassified0.0220.3470.4
familyPodoviridae0.0210.3540.408
speciesErysipelotrichaceae_bacterium_6_1_45-0.0210.3650.419
speciesBacteroides_salanitronis0.0210.370.424
speciesAlistipes_unclassified0.0210.3730.426
speciesLachnospiraceae_bacterium_1_1_57FAA0.0210.3750.428
genusStaphylococcus-0.020.3770.429
speciesBacteroides_eggerthii0.020.3850.437
speciesSutterella_parvirubra0.020.3890.44
genusFaecalibacterium-0.020.3910.44
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speciesCoprobacillus_sp_D6-0.0190.4040.454
speciesSutterella_wadsworthensis-0.0180.4240.475
speciesBacteroides_massiliensis0.0180.4260.476
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0170.4520.504
genusLachnospiraceae_noname-0.0170.4530.504
speciesPorphyromonas_asaccharolytica0.0170.4660.518
speciesLactococcus_phage_P680-0.0170.470.52
orderCaudovirales-0.0170.4710.52
genusTunalikevirus0.0170.4720.52
genusMorganella-0.0170.4740.52
speciesMorganella_morganii-0.0170.4740.52
speciesParabacteroides_sp_20_30.0170.4750.52
phylumProteobacteria-0.0160.4850.53
speciesRuminococcus_champanellensis-0.0150.5090.555
genusButyrivibrio0.0150.5160.561
familyAcidaminococcaceae-0.0150.5310.576
speciesLactococcus_phage_jm2-0.0130.5710.618
speciesBacteroides_finegoldii0.0130.5790.625
speciesPorphyromonas_uenonis-0.0130.580.625
speciesParabacteroides_sp_D130.0130.5840.628
speciesEubacterium_ventriosum0.0110.6210.666
speciesEnterobacteria_phage_HK544-0.0110.6250.668
genusDialister-0.0110.6260.668
genusSutterella-0.0110.6450.687
familySiphoviridae-0.010.6810.724
speciesLachnospiraceae_bacterium_6_1_63FAA0.0090.6970.739
speciesDesulfovibrio_piger0.0090.7050.746
speciesProteus_mirabilis-0.0080.7170.757
speciesRoseburia_inulinivorans0.0080.7330.772
speciesStreptococcus_phage_Sfi21-0.0070.7570.796
familySuccinivibrionaceae-0.0070.7610.797
genusSuccinatimonas-0.0070.7630.797
speciesSuccinatimonas_hippei-0.0070.7630.797
genusMitsuokella-0.0070.7690.801
speciesLactococcus_phage_phi7-0.0060.7790.81
genusAdlercreutzia0.0050.8130.842
speciesAdlercreutzia_equolifaciens0.0050.8130.842
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0050.8280.855
speciesLactobacillus_reuteri-0.0040.8550.881
genusAcidaminococcus-0.0040.8590.883
genusPorphyromonas-0.0040.8630.886
speciesCoprococcus_sp_ART55_10.0030.8990.92
speciesRuminococcus_lactaris0.0020.9160.936
genusPeptoniphilus0.0020.9180.936
speciesParaprevotella_xylaniphila-0.0020.9270.943
speciesPrevotella_stercorea-0.0020.9310.945
speciesClostridium_spiroforme-0.0020.9360.948
speciesBacteroides_sp_4_3_47FAA0.0010.950.959
speciesClostridium_sp_L2_50-0.0010.9510.959
speciesMitsuokella_unclassified-0.0010.9540.96
speciesOdoribacter_unclassified-0.0010.9560.96
speciesLactococcus_phage_bIL67-0.0010.9730.975
speciesBifidobacterium_angulatum0.00.990.99
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.06735411294710.08714356368570.000761488640012712623.9377
Crohns diseaseSpain17660.09934772103010.08071647114580.1128820942291422547.2984
Type II diabetesDenmark752770.1051727135880.09292677293390.1390739980611106036.254
Ulcerative colitisSpain78660.06902832566410.08071647114580.153420879798916830.2435
Type II diabetesSweden53920.0659746752990.05779178678180.4492360746281494650.6129
Rheumatoid arthritisChina127980.07641064035290.07363272184760.4948331235751755658.5454
Type II diabetesChina1831850.09058910865690.09001323793260.5611164445952214273.1749
Colorectal cancerAustria64350.0476093757090.0456350478050.5956643452112040469.035
ObesityDenmark1691230.09093047662670.09493410755770.7448440590722496682.0953
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382