MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:01:03 PST
Job id & description: 2388, purine8
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
DOM005_GL00035393243881CompleteK05810NOG134282unknownunknown100.0100.0100.0
N087A_GL01077743244711CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
MH0379_GL00077893237811Lack 5'-endK00777NOG09378unknownunknown100.0100.0100.0
MH0021_GL00356273248171CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0309_GL01705373236469CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0414_GL00521633254574CompleteK05810NOG134282BacteroidetesBacteroides100.0100.0100.0
622312.ROSEINA2194_016823247577CompleteK00777NOG09378FirmicutesRoseburia100.0100.0100.0
MH0373_GL01410613237672CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0086_GL01171373248839CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0103_GL00556583249186CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0200_GL02004873250897CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0349_GL00334633237080CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0385_GL01254143237943CompleteK03783COG0005unknownunknown100.0100.0100.0
N009A_GL00263633260632CompleteK05810COG1496unknownunknown100.0100.0100.0
NLM023_GL00990553244076CompleteK03783COG0005FirmicutesFaecalibacterium100.0100.0100.0
MH0006_GL00368153247798CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0116_GL00351583249353CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0189_GL01120803250593CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0193_GL00945263250714CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0330_GL00167323252818CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0357_GL01034613253241CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
N037A_GL01281083260727CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC2-1_GL00256173256075CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
O2.UC30-1_GL00886043256318CompleteK00777NOG09378unknownunknown100.0100.0100.0
O2.UC48-0_GL00261343240634CompleteK05810COG1496unknownunknown100.0100.0100.0
411467.BACCAP_027403247398CompleteK03783COG0005FirmicutesPseudoflavonifractor100.0100.0100.0
MH0188_GL00298973250476CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0447_GL02268363255342CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC2-1_GL00224703256074CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
562983.HMPREF0433_006103247565CompleteK03783COG0005FirmicutesGemella100.0100.0100.0
MH0222_GL01832313251177CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0239_GL00997873251416CompleteK05810NOG134282unknownunknown100.0100.0100.0
V1.UC38-4_GL00579303243092CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
706433.HMPREF9430_008723247608CompleteK03783COG0005FirmicutesSolobacterium100.0100.0100.0
BGI003A_GL00668813260502Lack 5'-endK05810COG1496ProteobacteriaSutterella100.0100.0100.0
MH0050_GL00389823248459CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0309_GL00612443236451CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0385_GL01421133253954CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0433_GL00693873238939CompleteK03783COG0005FirmicutesPseudoflavonifractor100.0100.0100.0
O2.UC15-1_GL01163323255920CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC30-1_GL00761353256316CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC36-0_GL01605833240353CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC37-0_GL00085933256459CompleteK00772COG0005unknownunknown100.0100.0100.0
T2D-91A_GL00767883245739CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
O2.UC47-2_GL00248773240604CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC48-0_GL00997163256758CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD35-0_GL00197413257591CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0012_GL01393173248037CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0217_GL00653583251107CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0327_GL00651813252743CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0358_GL01211953237302CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
O2.UC19-1_GL00132093256004CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-112A_GL00672363245013CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
V1.CD3-0-PN_GL00161733257462CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0013_GL00211653248085CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0188_GL01441623250520CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0200_GL00429413250869CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0239_GL01187333235407CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0277_GL00473323252114CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
MH0314_GL00062063236497CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0333_GL00337013236795CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0382_GL01002383237864CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0432_GL01609643238910CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.FI10_GL00246963242046CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.FI17_GL00909103258360CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC17-2_GL01030173242815CompleteK03783COG0005unknownunknown100.0100.0100.0
160400887-stool1_revised3246573Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
BGI-15A_GL00417573260516CompleteK03783COG0005unknownunknown100.0100.0100.0
ED16A_GL00598493245781CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0362_GL00991863237371CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0373_GL00479103237643CompleteK03783COG0005unknownunknown100.0100.0100.0
N089A_GL00365833244720CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC32-1_GL00287983240284CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-51A_GL00132623245472CompleteK03783COG0005BacteroidetesParabacteroides100.0100.0100.0
T2D-77A_GL00477763245684CompleteK03815COG0005ProteobacteriaEnterobacter100.0100.0100.0
V1.FI20_GL00674733242323CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0298_GL01739783236321CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0447_GL00613843255319CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC40-0_GL00800793259234CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-112A_GL00184533261171CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0003_GL00193253247731CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0047_GL00236773248440CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0192_GL00796073234606CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0336_GL00193293252882CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-33A_GL00365533261578Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
V1.FI11_GL00842323258191CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0189_GL00100243250547CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0224_GL01589413235166CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0376_GL01156203237749CompleteK03783COG0005unknownunknown100.0100.0100.0
158479027-stool1_revised3246083CompleteK03783COG0005unknownunknown100.0100.0100.0
158499257-stool1_revised3246144CompleteK03783COG0005unknownunknown100.0100.0100.0
160400887-stool1_revised3246568CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC50-1_GL01702123243330CompleteK03783COG0005unknownunknown100.0100.0100.0
158458797-stool1_revised3246062CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0012_GL01620583248047CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0336_GL00379763252887CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0124_GL01027273249479CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.FI10_GL01181613258185CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC33-0_GL00990203259099CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC31-0_GL00963963259076CompleteK03783COG1683;COG0005ActinobacteriaCollinsella100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesBacteroides_caccae0.3376.64e-513.13e-48
speciesAlistipes_shahii0.3113.46e-438.17e-41
genusSubdoligranulum0.3027.77e-411.22e-38
speciesSubdoligranulum_unclassified0.3011.57e-401.85e-38
genusOdoribacter0.2861.58e-361.49e-34
familyRikenellaceae0.2764.08e-342.75e-32
genusAlistipes0.2764.08e-342.75e-32
speciesRoseburia_inulinivorans0.2766.12e-343.61e-32
speciesAlistipes_senegalensis0.2723.61e-331.86e-31
speciesOdoribacter_splanchnicus0.2723.94e-331.86e-31
speciesLachnospiraceae_bacterium_7_1_58FAA0.2643.62e-311.55e-29
speciesEubacterium_siraeum0.2587.11e-302.8e-28
speciesAnaerotruncus_unclassified0.2497.35e-282.67e-26
genusPseudoflavonifractor0.2463.91e-271.23e-25
speciesPseudoflavonifractor_capillosus0.2463.91e-271.23e-25
genusAnaerotruncus0.2413.21e-268.55e-25
familyBacteroidales_noname0.2413.44e-268.55e-25
genusBacteroidales_noname0.2413.44e-268.55e-25
speciesBacteroidales_bacterium_ph80.2413.44e-268.55e-25
speciesRuminococcus_gnavus-0.2358.77e-252.07e-23
phylumEuryarchaeota0.2291.23e-232.76e-22
classMethanobacteria0.2281.59e-233.13e-22
orderMethanobacteriales0.2281.59e-233.13e-22
familyMethanobacteriaceae0.2281.59e-233.13e-22
genusRoseburia0.2281.95e-233.68e-22
speciesRoseburia_hominis0.2272.51e-234.56e-22
genusMethanobrevibacter0.2258.33e-231.46e-21
familyOxalobacteraceae0.2231.35e-222.18e-21
speciesMethanobrevibacter_smithii0.2231.37e-222.18e-21
speciesAlistipes_finegoldii0.2231.42e-222.18e-21
speciesBacteroides_intestinalis0.2231.43e-222.18e-21
genusOxalobacter0.2231.86e-222.66e-21
speciesOxalobacter_formigenes0.2231.86e-222.66e-21
speciesOscillibacter_unclassified0.2096.02e-208.36e-19
familyRuminococcaceae0.2088.58e-201.16e-18
familyOscillospiraceae0.2089.06e-201.16e-18
genusOscillibacter0.2089.06e-201.16e-18
genusBarnesiella0.2071.64e-191.98e-18
speciesBarnesiella_intestinihominis0.2071.64e-191.98e-18
speciesAlistipes_indistinctus0.2021.18e-181.39e-17
speciesAlistipes_putredinis0.1984.55e-185.24e-17
phylumVerrucomicrobia0.1985.52e-185.54e-17
classVerrucomicrobiae0.1985.52e-185.54e-17
orderVerrucomicrobiales0.1985.52e-185.54e-17
familyVerrucomicrobiaceae0.1985.52e-185.54e-17
genusAkkermansia0.1985.52e-185.54e-17
speciesAkkermansia_muciniphila0.1985.52e-185.54e-17
familyPorphyromonadaceae0.1979.09e-188.94e-17
genusButyrivibrio0.1942.48e-172.39e-16
speciesClostridium_ramosum-0.1942.71e-172.56e-16
genusDesulfovibrio0.1933.52e-173.26e-16
classDeltaproteobacteria0.1925.4e-174.72e-16
orderDesulfovibrionales0.1925.4e-174.72e-16
familyDesulfovibrionaceae0.1925.4e-174.72e-16
genusRuminococcaceae_noname0.1857.22e-166.09e-15
speciesRuminococcaceae_bacterium_D160.1857.22e-166.09e-15
genusCoprobacillus-0.1831.29e-151.07e-14
speciesCoprobacillus_unclassified-0.1822.34e-151.9e-14
speciesEubacterium_ventriosum0.1752.33e-141.86e-13
speciesCoprococcus_catus0.1752.41e-141.9e-13
genusHoldemania0.1734.88e-143.78e-13
speciesLachnospiraceae_bacterium_3_1_46FAA0.1726.51e-144.96e-13
speciesMethanobrevibacter_unclassified0.1673.15e-132.36e-12
speciesAlistipes_onderdonkii0.1673.81e-132.81e-12
speciesBacteroides_cellulosilyticus0.1665.18e-133.76e-12
classClostridia0.1665.37e-133.78e-12
orderClostridiales0.1665.37e-133.78e-12
speciesEubacterium_eligens0.1648.48e-135.89e-12
speciesButyrivibrio_crossotus0.163.05e-122.09e-11
genusCoprococcus0.1594.32e-122.91e-11
genusMitsuokella0.1594.59e-123.05e-11
speciesMitsuokella_unclassified0.1561.3e-118.52e-11
speciesParabacteroides_merdae0.1551.69e-111.09e-10
speciesRuminococcus_lactaris0.1533.12e-111.99e-10
genusButyricimonas0.1524.49e-112.79e-10
speciesButyricimonas_synergistica0.1524.49e-112.79e-10
familyBacillales_noname-0.1514.8e-112.9e-10
genusGemella-0.1514.8e-112.9e-10
speciesDesulfovibrio_desulfuricans0.1515.54e-113.31e-10
familySutterellaceae0.1516.04e-113.56e-10
familyLachnospiraceae0.157.52e-114.38e-10
speciesHoldemania_filiformis0.1481.16e-106.68e-10
genusSutterella0.1471.71e-109.72e-10
speciesEubacterium_ramulus0.1462.55e-101.43e-09
orderBurkholderiales0.1453.08e-101.71e-09
speciesSutterella_wadsworthensis0.1434.57e-102.51e-09
classBetaproteobacteria0.1426.12e-103.32e-09
genusBilophila0.1426.21e-103.33e-09
orderLactobacillales-0.1418.21e-104.35e-09
classBacilli-0.1411.01e-095.24e-09
speciesBilophila_unclassified0.1411.01e-095.24e-09
speciesDialister_succinatiphilus0.141.08e-095.54e-09
orderBacillales-0.1391.6e-098.12e-09
genusFaecalibacterium0.1391.73e-098.6e-09
speciesFaecalibacterium_prausnitzii0.1391.73e-098.6e-09
speciesStreptococcus_gordonii-0.1382.32e-091.14e-08
speciesClostridium_clostridioforme-0.1372.6e-091.27e-08
speciesClostridium_leptum0.1345.26e-092.53e-08
speciesStreptococcus_mitis_oralis_pneumoniae-0.1345.91e-092.82e-08
speciesAnaerostipes_unclassified-0.1337.7e-093.63e-08
genusCoprobacter0.1338.08e-093.74e-08
speciesCoprobacter_fastidiosus0.1338.08e-093.74e-08
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1311.42e-086.51e-08
speciesBacteroides_nordii0.1311.45e-086.58e-08
genusStreptococcus-0.1292.14e-089.57e-08
speciesParabacteroides_goldsteinii0.1292.15e-089.57e-08
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.1292.23e-089.84e-08
speciesBifidobacterium_breve-0.1282.6e-081.14e-07
speciesBilophila_wadsworthia0.1282.73e-081.18e-07
speciesBacteroides_uniformis0.1282.97e-081.27e-07
speciesCoprococcus_sp_ART55_10.1273.5e-081.49e-07
familyStreptococcaceae-0.1273.97e-081.67e-07
genusParabacteroides0.1264.17e-081.74e-07
speciesRuminococcus_obeum0.1255.86e-082.43e-07
speciesVeillonella_parvula-0.1247.47e-083.07e-07
genusVeillonella-0.1221.09e-074.4e-07
speciesCoprococcus_comes0.1221.09e-074.4e-07
genusCollinsella0.1221.1e-074.4e-07
speciesMegasphaera_micronuciformis-0.1221.21e-074.8e-07
speciesHoldemania_unclassified0.1221.24e-074.88e-07
speciesEubacterium_hallii0.1221.28e-074.99e-07
speciesLactobacillus_salivarius-0.1211.48e-075.73e-07
speciesCollinsella_aerofaciens0.1211.5e-075.76e-07
speciesBlautia_producta-0.121.99e-077.57e-07
speciesEggerthella_unclassified-0.1183.18e-071.2e-06
genusLactobacillus-0.1165.41e-072.01e-06
genusEggerthella-0.1165.42e-072.01e-06
speciesCoprococcus_eutactus0.1155.6e-072.07e-06
speciesBacteroides_dorei0.1156.54e-072.39e-06
familyLactobacillaceae-0.1146.95e-072.52e-06
speciesLactobacillus_mucosae-0.1138.64e-073.11e-06
speciesEubacterium_biforme0.1139.23e-073.3e-06
speciesOlsenella_unclassified0.1121.11e-063.94e-06
speciesStreptococcus_sanguinis-0.1121.15e-064.05e-06
speciesLachnospiraceae_bacterium_2_1_58FAA-0.1121.34e-064.69e-06
speciesDesulfovibrio_piger0.1111.4e-064.86e-06
speciesStreptococcus_anginosus-0.1111.51e-065.2e-06
speciesStreptococcus_salivarius-0.111.94e-066.64e-06
genusPantoea-0.111.97e-066.64e-06
speciesPantoea_unclassified-0.111.97e-066.64e-06
speciesParaprevotella_xylaniphila0.1092.43e-068.13e-06
speciesVeillonella_unclassified-0.1092.55e-068.48e-06
speciesStreptococcus_vestibularis-0.1083.15e-061.04e-05
speciesLachnospiraceae_bacterium_6_1_63FAA-0.1073.76e-061.23e-05
speciesLactobacillus_rhamnosus-0.1064.49e-061.46e-05
speciesParaprevotella_clara0.1064.51e-061.46e-05
genusAdlercreutzia0.1046.8e-062.17e-05
speciesAdlercreutzia_equolifaciens0.1046.8e-062.17e-05
speciesAlistipes_sp_AP110.1047.22e-062.29e-05
speciesBacteroides_salyersiae0.1038.1e-062.55e-05
speciesClostridium_bolteae-0.1029.1e-062.84e-05
genusParaprevotella0.1011.14e-053.54e-05
speciesFusobacterium_nucleatum-0.1011.21e-053.73e-05
speciesLactobacillus_gasseri-0.11.57e-054.81e-05
speciesParaprevotella_unclassified0.11.59e-054.84e-05
classGammaproteobacteria-0.0991.79e-055.42e-05
genusKlebsiella-0.0991.92e-055.77e-05
speciesRuminococcus_champanellensis0.0982.17e-056.48e-05
speciesClostridium_sp_L2_500.0972.53e-057.51e-05
speciesLactobacillus_oris-0.0963.16e-059.32e-05
speciesLachnospiraceae_bacterium_5_1_57FAA-0.0953.55e-050.000104
genusCatenibacterium0.0953.86e-050.000112
speciesCatenibacterium_mitsuokai0.0953.86e-050.000112
speciesStreptococcus_mutans-0.0935.29e-050.000152
speciesGemella_morbillorum-0.0917.44e-050.000213
speciesLactobacillus_amylovorus-0.0917.73e-050.00022
speciesDorea_longicatena0.0917.97e-050.000224
speciesBifidobacterium_dentium-0.0917.99e-050.000224
phylumFirmicutes0.0918.14e-050.000227
speciesBacteroides_eggerthii0.0918.26e-050.000229
genusEubacterium0.099.96e-050.000275
familyEubacteriaceae0.090.0001030.000283
orderEnterobacteriales-0.0880.0001310.000355
familyEnterobacteriaceae-0.0880.0001310.000355
familyVeillonellaceae-0.0880.0001340.000361
speciesLachnospiraceae_bacterium_1_4_56FAA-0.0880.0001360.000365
speciesVeillonella_dispar-0.0880.0001380.000368
genusPorphyromonas0.0870.0001740.000461
speciesRuminococcus_bromii0.0870.0001750.000461
speciesLactobacillus_crispatus-0.0860.0001960.000514
speciesStreptococcus_parasanguinis-0.0860.0001970.000514
genusOlsenella0.0860.0002130.000552
familyClostridiales_noname0.0850.0002150.000555
familyLeuconostocaceae-0.0850.000230.00059
genusMegasphaera-0.0850.0002350.0006
speciesDorea_formicigenerans0.0850.0002450.000622
genusPhascolarctobacterium0.0850.0002490.000625
speciesPhascolarctobacterium_succinatutens0.0850.0002490.000625
speciesBifidobacterium_pseudocatenulatum-0.0830.0003350.000837
genusSolobacterium-0.0830.0003410.000838
speciesSolobacterium_moorei-0.0830.0003410.000838
speciesLactobacillus_fermentum-0.0830.0003410.000838
speciesStreptococcus_australis-0.0820.0003780.000924
speciesButyrivibrio_unclassified0.0820.0003980.000968
speciesSubdoligranulum_sp_4_3_54A2FAA0.0820.0004120.000997
speciesVeillonella_atypica-0.0810.0004650.00112
speciesPorphyromonas_asaccharolytica0.0810.0004690.00112
genusRuminococcus0.0810.0004760.00113
speciesRuminococcus_callidus0.0810.0004840.00115
speciesBifidobacterium_adolescentis0.080.0005650.00133
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genusWeissella-0.0790.0006320.00148
genusEnterococcus-0.0790.0006350.00148
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speciesWeissella_confusa-0.0760.001010.00222
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speciesWeissella_cibaria-0.0630.006290.0118
speciesParabacteroides_sp_D130.0630.006510.0121
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speciesKlebsiella_oxytoca-0.060.009410.0172
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speciesAlistipes_sp_HGB50.0580.01190.0214
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familyClostridiales_Family_XI_Incertae_Sedis-0.0570.01350.024
genusCitrobacter-0.0570.01360.0241
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speciesEubacterium_cylindroides0.0540.01880.0329
speciesMegamonas_hypermegale-0.0540.02010.035
speciesFusobacterium_ulcerans-0.0540.02060.0357
speciesRoseburia_unclassified-0.0530.02180.0377
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speciesErysipelotrichaceae_bacterium_21_30.0510.02690.0457
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speciesCitrobacter_unclassified-0.050.0320.0534
speciesLeuconostoc_lactis-0.0490.03410.0567
genusParvimonas-0.0480.03670.0608
speciesParvimonas_unclassified-0.0480.03690.0609
speciesBacteroides_coprocola0.0480.0370.0609
speciesEubacterium_rectale0.0480.03950.0647
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speciesLactococcus_phage_936_sensu_lato0.0470.04080.066
speciesLactobacillus_ruminis0.0470.04110.0662
familyBacteroidaceae0.0470.04390.0702
genusBacteroides0.0470.04390.0702
speciesEscherichia_unclassified-0.0470.04430.0706
speciesEubacterium_dolichum-0.0460.04470.071
genusPyramidobacter-0.0460.04750.075
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speciesLactobacillus_sanfranciscensis-0.0460.04780.0752
speciesCitrobacter_freundii-0.0460.04840.0759
speciesHaemophilus_sputorum-0.0450.04920.0769
genusClostridiaceae_noname0.0450.04980.0773
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speciesErysipelotrichaceae_bacterium_3_1_53-0.0450.05090.0788
speciesClostridium_bartlettii-0.0450.05330.0822
speciesEnterobacter_cloacae-0.0440.0570.0876
genusCampylobacter-0.0440.05740.088
familyPeptostreptococcaceae-0.0430.06180.0944
genusProteus-0.0430.06270.0955
speciesClostridiales_bacterium_1_7_47FAA-0.0430.06350.0964
familyMyoviridae-0.0430.06420.0971
classErysipelotrichia0.0420.06630.0993
orderErysipelotrichales0.0420.06630.0993
familyErysipelotrichaceae0.0420.06630.0993
genusLachnospiraceae_noname0.0420.06790.101
speciesBacteroides_finegoldii0.0420.06950.103
familyCampylobacteraceae-0.0410.07340.109
speciesBacteroides_massiliensis0.0410.07580.112
speciesBacteroides_thetaiotaomicron0.040.08330.123
speciesProteus_mirabilis-0.040.08340.123
speciesLachnospiraceae_bacterium_1_1_57FAA0.040.08730.128
speciesClostridium_sp_ATCC_BAA_4420.0390.08990.131
speciesPorphyromonas_uenonis0.0390.09070.132
speciesKlebsiella_unclassified-0.0390.09160.133
speciesPeptostreptococcaceae_noname_unclassified0.0390.09370.136
speciesMegasphaera_unclassified-0.0390.09550.138
speciesBifidobacterium_animalis0.0380.09660.139
speciesLactococcus_phage_P6800.0380.1010.145
speciesBlautia_hydrogenotrophica-0.0380.1020.146
familyBurkholderiales_noname0.0380.1030.147
genusActinobacillus-0.0380.1040.147
speciesActinobacillus_unclassified-0.0380.1040.147
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0370.1050.148
genusBurkholderiales_noname0.0370.1070.15
speciesBurkholderiales_bacterium_1_1_470.0370.1070.15
speciesOscillibacter_sp_KLE_17450.0370.1090.153
speciesCoprobacillus_sp_D6-0.0370.1110.155
phylumSynergistetes-0.0370.1130.156
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familySynergistaceae-0.0370.1130.156
genusEnterobacter-0.0370.1140.157
speciesLactobacillus_casei_paracasei-0.0360.1160.159
speciesBacteroides_fragilis-0.0360.1160.159
genusButyricicoccus0.0360.1190.162
speciesButyricicoccus_pullicaecorum0.0360.1190.162
classEpsilonproteobacteria-0.0350.1260.17
orderCampylobacterales-0.0350.1260.17
speciesEnterococcus_faecium-0.0350.130.175
speciesDorea_unclassified-0.0350.1350.182
phylumActinobacteria-0.0340.1390.186
classActinobacteria-0.0340.1390.186
speciesLactobacillus_reuteri-0.0340.1410.188
genusAcidaminococcaceae_unclassified0.0320.1610.214
speciesBacteroides_fluxus0.0320.170.225
speciesRuminococcus_torques0.0320.170.225
speciesStreptococcus_pasteurianus-0.0320.1720.227
genusSlackia-0.0310.1790.235
speciesBifidobacterium_angulatum0.0310.1850.243
speciesBacteroides_vulgatus0.030.1940.254
speciesParabacteroides_sp_20_30.030.1950.254
genusGordonibacter0.030.1960.254
speciesGordonibacter_pamelaeae0.030.1960.254
genusErysipelotrichaceae_noname0.030.1970.255
speciesAcidaminococcus_fermentans0.0290.2160.279
speciesClostridium_asparagiforme0.0290.2180.28
speciesBacteroides_xylanisolvens0.0280.220.282
speciesMegamonas_rupellensis-0.0280.2230.285
speciesOdoribacter_laneus0.0280.2290.292
orderPseudomonadales-0.0280.2310.294
speciesParabacteroides_unclassified0.0270.2350.298
speciesFusobacterium_mortiferum-0.0270.2410.304
speciesBifidobacterium_longum-0.0270.2410.304
speciesKlebsiella_phage_KP360.0260.2640.332
speciesEnterobacteria_phage_HK5440.0260.2660.334
familyPrevotellaceae0.0250.2860.358
familyPropionibacteriaceae-0.0250.2870.358
speciesClostridium_citroniae-0.0250.2880.359
speciesSutterella_parvirubra0.0240.2940.365
speciesAnaerotruncus_colihominis0.0240.3030.375
speciesPrevotella_stercorea0.0240.3060.378
genusSutterellaceae_unclassified0.0230.310.382
speciesEubacterium_sp_3_1_31-0.0230.3110.382
speciesCoprobacillus_sp_29_1-0.0230.3140.385
orderViruses_noname0.0230.3180.389
familySuccinivibrionaceae0.0230.3210.392
genusClostridium-0.0220.3520.428
familySiphoviridae0.0210.3530.428
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0210.3640.441
speciesBacteroides_ovatus0.0210.3690.445
speciesStreptococcus_infantarius-0.0210.3720.448
genusSuccinatimonas0.020.3810.455
speciesSuccinatimonas_hippei0.020.3810.455
phylumViruses_noname0.020.3820.455
classViruses_noname0.020.3820.455
speciesBacteroides_salanitronis0.020.3940.468
speciesBacteroides_sp_2_1_220.020.3990.473
speciesRuminococcus_sp_5_1_39BFAA0.0190.4170.493
genusC2likevirus0.0190.4180.493
familyClostridiaceae-0.0190.4190.493
speciesCollinsella_tanakaei0.0190.4230.497
speciesClostridium_sp_KLE_1755-0.0180.4290.502
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0180.4380.512
speciesCollinsella_unclassified0.0180.4410.514
speciesC2likevirus_unclassified0.0180.4430.515
speciesLactobacillus_delbrueckii-0.0180.4450.516
genusDialister0.0170.4510.522
genusMyoviridae_noname-0.0170.4540.524
orderAeromonadales0.0170.4550.524
speciesClostridium_spiroforme-0.0170.4630.532
genusTunalikevirus0.0170.470.538
speciesMegasphaera_elsdenii-0.0160.4930.563
speciesLactococcus_lactis-0.0150.5110.583
familyPodoviridae0.0150.5140.585
speciesEubacterium_limosum0.0150.520.59
speciesOdoribacter_unclassified0.0150.5210.59
phylumBacteroidetes-0.0150.5290.594
classBacteroidia-0.0150.5290.594
orderBacteroidales-0.0150.5290.594
speciesLactobacillus_acidophilus-0.0140.5390.603
familyViruses_noname0.0140.540.603
genusViruses_noname0.0140.540.603
speciesClostridium_hathewayi-0.0140.5430.604
speciesBacteroides_barnesiae0.0130.5720.635
speciesRuminococcus_sp_JC304-0.0130.5840.647
speciesLachnospiraceae_bacterium_5_1_63FAA0.0130.5890.651
speciesLactococcus_garvieae-0.0120.5950.656
genusPropionibacterium-0.0120.6130.674
familyStaphylococcaceae-0.0110.6250.686
speciesHoldemania_sp_AP20.010.6540.716
speciesEnterobacter_aerogenes-0.010.6580.719
speciesBacteroides_plebeius-0.010.6680.728
speciesAcidaminococcus_unclassified-0.010.6710.73
speciesLactococcus_phage_phi70.0090.6850.743
speciesTuricibacter_sanguinis-0.0090.6870.744
speciesTuricibacter_unclassified0.0090.7010.757
phylumProteobacteria-0.0090.7040.759
speciesOscillibacter_sp_KLE_1728-0.0090.710.761
genusSiphoviridae_noname0.0090.7110.761
speciesBacteroides_coprophilus0.0090.7110.761
genusFlavonifractor0.0080.7150.762
speciesFlavonifractor_plautii0.0080.7150.762
speciesPrevotella_copri0.0080.720.765
speciesSlackia_piriformis-0.0080.7260.77
genusPeptoniphilus-0.0080.730.773
genusLactococcus-0.0080.7380.779
genusAcidaminococcus-0.0070.7610.802
speciesStreptococcus_phage_Sfi210.0070.7680.807
speciesCollinsella_intestinalis-0.0070.7780.816
genusPrevotella0.0060.7920.829
genusStaphylococcus-0.0050.8180.854
genusLambdalikevirus0.0050.8280.863
orderCaudovirales0.0050.8420.873
speciesAcidaminococcus_intestini-0.0050.8420.873
speciesBacteroides_sp_1_1_60.0040.8520.882
speciesLactococcus_phage_jm2-0.0040.8590.887
speciesErysipelotrichaceae_bacterium_6_1_45-0.0030.8820.909
speciesBacteroides_sp_3_1_19-0.0030.8890.912
speciesStreptococcus_thermophilus-0.0030.8890.912
genusAnaerostipes-0.0030.8970.918
genusTuricibacter0.0030.9010.921
speciesPropionibacterium_freudenreichii0.0030.9070.925
speciesPeptostreptococcus_anaerobius-0.0010.950.963
speciesAlistipes_unclassified-0.0010.950.963
speciesBifidobacterium_catenulatum0.0010.9520.963
speciesPrevotella_bivia-0.0010.9540.963
speciesBacteroides_sp_4_3_47FAA-0.0010.9550.963
speciesLactococcus_phage_bIL670.0010.9680.974
speciesBacteroides_stercoris-0.0010.9740.978
speciesLachnospiraceae_bacterium_8_1_57FAA0.00.9910.993
genusClostridiales_noname0.00.9940.994
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.01258553244340.02811280662298.81409078033e-0518396.11471
Liver cirrhosisChina1201140.02807153381180.03312220736910.00633252519087998533.5416
Type II diabetesDenmark752770.03975286918510.03345365954930.0205956584247530217.3796
Type II diabetesSweden53920.02669537097120.03004839220790.0990283567355357412.1029
Type II diabetesChina1831850.02967337958210.02422838806420.316561708511675155.3587
ObesityDenmark1691230.03255187450610.03468270793580.3183968750851456147.8807
Colorectal cancerAustria64350.02970521919110.03071564236270.4937542275791814061.375
Ulcerative colitisSpain78660.02803751532190.02811280662290.6599071804962298175.8099
Rheumatoid arthritisChina127980.02829273757210.03196053228620.8484808382312610887.0644
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382