MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:01:37 PST
Job id & description: 2389, purine9
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0339_GL00214593269118Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0125_GL00416003265632CompleteK05810COG1496unknownunknown100.0100.0100.0
158499257-stool2_revised3278407Lack 5'-endK00772COG0005unknownunknown100.0100.0100.0
MH0011_GL00365843264106CompleteK05810COG1496;NOG134282unknownunknown100.0100.0100.0
MH0150_GL01361013266133CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0440_GL01253593271219CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0062_GL00397163264754CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
V1.CD54-0_GL00778053273905CompleteK05810COG1496FirmicutesAnaerostipes100.0100.0100.0
NOF013_GL00598553276467CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0341_GL00039033269147CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
658086.HMPREF0994_023263279853CompleteK00757firmNOG03686Firmicutesunknown100.0100.0100.0
765094712-stool1_revised3279399CompleteK05810COG1496Bacteroidetesunknown100.0100.0100.0
MH0006_GL01622833264027CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0022_GL00125443280432CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0080_GL00610943264929CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0174_GL00128783266403CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0359_GL00591193269461CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC7-0_GL00232473289247CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0187_GL00870683282703CompleteK05810NOG134282unknownunknown100.0100.0100.0
T2D-63A_GL00495643277840CompleteK00772COG0005unknownunknown100.0100.0100.0
V1.CD38-0_GL01262603289859CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC18-0_GL00153393288207CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
V1.CD15-3_GL01035893273282CompleteK03783COG0005unknownunknown100.0100.0100.0
763597684-stool1_revised3279064CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0041_GL00425733280625Lack 5'-endK00777NOG09378unknownunknown100.0100.0100.0
V1.CD15-3_GL00493763273270CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD54-0_GL00211623273883CompleteK03783COG0005unknownunknown100.0100.0100.0
DOM012_GL00033173292259CompleteK00772COG0005FirmicutesAcidaminococcus100.0100.0100.0
MH0020_GL00358403280415CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD44-0_GL00091723273789CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC39-4_GL00527793275326CompleteK03783COG0005ProteobacteriaProvidencia100.0100.0100.0
MH0220_GL00261123267271CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD3-0-PN_GL01255273273563CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
V1.CD35-0_GL00051163289808CompleteK05810COG1496unknownunknown100.0100.0100.0
411467.BACCAP_007233279664CompleteK05810COG1496FirmicutesPseudoflavonifractor100.0100.0100.0
DLM022_GL00151723292126CompleteK00777NOG09378Firmicutesunknown100.0100.0100.0
MH0277_GL00240033268281CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0419_GL00530993286983CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
NOM026_GL00400693276546CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0277_GL00281873268285CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
MH0277_GL00433253268308CompleteK03783COG0005FirmicutesEnterococcus100.0100.0100.0
MH0431_GL01866363287251CompleteK03783COG0005unknownunknown100.0100.0100.0
195102.CPE03983279505CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
MH0200_GL00518533283077CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0277_GL00497753268314CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC24-1_GL01253343272219CompleteK03783COG0005unknownunknown100.0100.0100.0
158458797-stool1_revised3278301CompleteK03783COG0005unknownunknown100.0100.0100.0
596329.HMPREF0631_18153279835CompleteK03783COG0005FirmicutesPeptostreptococcus100.0100.0100.0
MH0004_GL00168883280029CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0016_GL00346053280383CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0147_GL00631493282191CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0193_GL00693453266878CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0277_GL00527113268317CompleteK03783COG0005FirmicutesEnterococcus100.0100.0100.0
MH0298_GL00881623268509CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0336_GL01196193285204CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0441_GL00357673287496CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD3-0-PT_GL00441763273580CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD32-0_GL01540953289760CompleteK05810COG1496unknownunknown100.0100.0100.0
158337416-stool1_revised3278230CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
457396.CSBG_030893279692CompleteK03783COG0005FirmicutesClostridium100.0100.0100.0
765701615-stool1_revised3263333CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0140_GL00475073281993CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0153_GL00572093266180CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC1-2_GL00105393288100CompleteK03783COG0005BacteroidetesPorphyromonas100.0100.0100.0
O2.UC11-1_GL00917973288031CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
V1.CD6-0-PN_GL01069103273951CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC17-2_GL00820303291138CompleteK05810COG1496unknownunknown100.0100.0100.0
DOF012_GL00388523276091CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0003_GL00888343280009CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0006_GL01309893264013CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0143_GL00717683282088CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0158_GL00120223266233CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0277_GL00305703268288CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0287_GL00830963268430CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0361_GL00371673269483CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC44-2_GL00184523288850CompleteK03783COG0005BacteroidetesPorphyromonas100.0100.0100.0
O2.UC50-2_GL02276723272941CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD22-0_GL01041963289599CompleteK03784COG0813FirmicutesMegasphaera100.0100.0100.0
V1.UC35-0_GL00339293291331CompleteK03783COG0005BacteroidetesPorphyromonas100.0100.0100.0
DOF003_GL00877003292183Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
MH0198_GL00150583267003CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0222_GL01010353283380CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0271_GL01425433284223CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0083_GL00410873281062CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0145_GL01024143282162CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0367_GL01575863285784CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0386_GL00669563286271CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0041_GL00592683264528CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0077_GL00727673281012CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0415_GL02409683270666CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0431_GL00385773287229CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0012_GL00492363280262CompleteK03783COG0005unknownunknown100.0100.0100.0
SZEY-104A_GL00650073278147CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.FI16_GL00879203290524CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI27_GL01526633290765Lack 5'-endK03783COG0005FirmicutesStreptococcus100.0100.0100.0
V1.CD6-0-PT_GL01759823290123Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
MH0243_GL00540693283683CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC24-0_GL00304053288382CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0337_GL00473413285216CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC26-4_GL01658513291251CompleteK05810COG1496unknownunknown100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesRuminococcus_obeum0.3854.41e-672.08e-64
speciesEubacterium_hallii0.371.08e-611.97e-59
phylumFirmicutes0.371.25e-611.97e-59
classBacteroidia-0.3693.15e-612.53e-59
orderBacteroidales-0.3693.15e-612.53e-59
phylumBacteroidetes-0.3683.22e-612.53e-59
orderCoriobacteriales0.3662.43e-601.43e-58
familyCoriobacteriaceae0.3662.43e-601.43e-58
genusDorea0.3543.11e-561.63e-54
speciesRuminococcus_sp_5_1_39BFAA0.3391.16e-515.07e-50
classClostridia0.3391.29e-515.07e-50
orderClostridiales0.3391.29e-515.07e-50
phylumActinobacteria0.3292.14e-487.21e-47
classActinobacteria0.3292.14e-487.21e-47
speciesAnaerostipes_hadrus0.3161.56e-444.91e-43
familyLachnospiraceae0.3153.14e-449.26e-43
genusRuminococcus0.3131.11e-433.08e-42
speciesDorea_longicatena0.318.16e-432.14e-41
genusBlautia0.34.05e-401.01e-38
speciesLachnospiraceae_bacterium_5_1_63FAA0.2996.99e-401.65e-38
genusLachnospiraceae_noname0.2972.6e-395.84e-38
genusAnaerostipes0.2892.49e-375.34e-36
familyRuminococcaceae0.286.39e-351.31e-33
speciesCoprococcus_comes0.2797.12e-351.39e-33
genusCoprococcus0.2797.37e-351.39e-33
speciesRuminococcus_torques0.2772.99e-345.43e-33
speciesStreptococcus_thermophilus0.2733.09e-335.4e-32
speciesDorea_formicigenerans0.271.51e-322.55e-31
genusSubdoligranulum0.2669.49e-321.54e-30
speciesSubdoligranulum_unclassified0.2643.93e-316.18e-30
speciesEubacterium_ramulus0.263.62e-305.51e-29
genusAdlercreutzia0.2553.9e-295.58e-28
speciesAdlercreutzia_equolifaciens0.2553.9e-295.58e-28
genusCollinsella0.2531.27e-281.76e-27
orderBifidobacteriales0.2521.82e-282.39e-27
familyBifidobacteriaceae0.2521.82e-282.39e-27
genusBifidobacterium0.2522.12e-282.7e-27
speciesClostridium_leptum0.2481.45e-271.8e-26
speciesCollinsella_aerofaciens0.2454.63e-275.6e-26
speciesCoprococcus_catus0.2431.43e-261.69e-25
familyBacteroidaceae-0.2363.62e-254.07e-24
genusBacteroides-0.2363.62e-254.07e-24
speciesErysipelotrichaceae_bacterium_21_30.2358.05e-258.84e-24
familyActinomycetaceae0.2232.06e-222.21e-21
speciesBifidobacterium_longum0.2222.39e-222.46e-21
genusActinomyces0.2222.4e-222.46e-21
genusGordonibacter0.2223.18e-223.13e-21
speciesGordonibacter_pamelaeae0.2223.18e-223.13e-21
genusPrevotella-0.226.51e-226.27e-21
orderActinomycetales0.2181.74e-211.64e-20
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.2071.24e-191.15e-18
classErysipelotrichia0.1985.07e-184.43e-17
orderErysipelotrichales0.1985.07e-184.43e-17
familyErysipelotrichaceae0.1985.07e-184.43e-17
speciesBacteroides_stercoris-0.191.08e-169.27e-16
speciesBacteroides_thetaiotaomicron-0.191.33e-161.12e-15
speciesBifidobacterium_adolescentis0.1882.58e-162.14e-15
speciesErysipelotrichaceae_bacterium_6_1_450.1882.64e-162.15e-15
speciesPrevotella_copri-0.1865.01e-164.01e-15
speciesEubacterium_siraeum0.1849.42e-167.41e-15
genusHaemophilus-0.1841.17e-159.05e-15
familyEubacteriaceae0.1841.22e-159.29e-15
genusEubacterium0.1831.38e-151.03e-14
speciesHaemophilus_parainfluenzae-0.1831.44e-151.06e-14
phylumProteobacteria-0.1821.83e-151.31e-14
speciesBlautia_hydrogenotrophica0.1821.83e-151.31e-14
orderPasteurellales-0.184.58e-153.18e-14
familyPasteurellaceae-0.184.58e-153.18e-14
phylumVerrucomicrobia0.1781.05e-146.7e-14
classVerrucomicrobiae0.1781.05e-146.7e-14
orderVerrucomicrobiales0.1781.05e-146.7e-14
familyVerrucomicrobiaceae0.1781.05e-146.7e-14
genusAkkermansia0.1781.05e-146.7e-14
speciesAkkermansia_muciniphila0.1781.05e-146.7e-14
genusPseudoflavonifractor0.1771.29e-148.01e-14
speciesPseudoflavonifractor_capillosus0.1771.29e-148.01e-14
speciesEggerthella_lenta0.1752.77e-141.68e-13
speciesBacteroides_ovatus-0.1752.77e-141.68e-13
familyStreptococcaceae0.1734.41e-142.63e-13
speciesAnaerotruncus_unclassified0.1734.83e-142.85e-13
genusAnaerotruncus0.1735.52e-143.22e-13
genusMethanobrevibacter0.1719.45e-145.44e-13
genusStreptococcus0.171.2e-136.82e-13
speciesMethanobrevibacter_smithii0.171.57e-138.82e-13
speciesErysipelotrichaceae_bacterium_2_2_44A0.1691.91e-131.06e-12
classMethanobacteria0.1682.44e-131.31e-12
orderMethanobacteriales0.1682.44e-131.31e-12
familyMethanobacteriaceae0.1682.44e-131.31e-12
familyBacillales_noname0.1682.5e-131.31e-12
genusGemella0.1682.5e-131.31e-12
genusHoldemania0.1683e-131.56e-12
phylumEuryarchaeota0.1673.71e-131.9e-12
speciesPrevotella_stercorea-0.1665.55e-132.82e-12
classBacilli0.1649.9e-134.97e-12
orderBacillales0.1631.22e-126.06e-12
orderLactobacillales0.1631.42e-126.98e-12
familyPrevotellaceae-0.1631.44e-127.01e-12
speciesBifidobacterium_animalis0.1612.67e-121.29e-11
speciesPrevotella_buccae-0.163.06e-121.46e-11
speciesBacteroides_cellulosilyticus0.163.7e-121.75e-11
speciesLactococcus_lactis0.1594.27e-122e-11
speciesRuminococcus_bromii0.1594.52e-122.09e-11
classBetaproteobacteria-0.1594.65e-122.13e-11
genusLactococcus0.1585.51e-122.5e-11
speciesStreptococcus_sanguinis0.1586.89e-123.1e-11
genusErysipelotrichaceae_noname0.1578.7e-123.87e-11
speciesLachnospiraceae_bacterium_3_1_46FAA0.1578.86e-123.91e-11
speciesBacteroides_xylanisolvens-0.1561.15e-115.03e-11
speciesLactobacillus_delbrueckii0.1561.32e-115.72e-11
speciesLachnospiraceae_bacterium_7_1_58FAA0.1541.87e-118.02e-11
genusSolobacterium0.1542.41e-111.02e-10
speciesSolobacterium_moorei0.1542.41e-111.02e-10
genusCoprobacter0.1532.57e-111.06e-10
speciesCoprobacter_fastidiosus0.1532.57e-111.06e-10
speciesHoldemania_filiformis0.1533.02e-111.24e-10
genusPropionibacterium0.1524.04e-111.64e-10
orderBurkholderiales-0.1524.23e-111.71e-10
speciesKlebsiella_pneumoniae-0.1524.34e-111.74e-10
speciesLachnospiraceae_bacterium_1_4_56FAA0.1471.8e-107.14e-10
familySutterellaceae-0.1426.11e-102.4e-09
speciesVeillonella_unclassified-0.1426.61e-102.58e-09
speciesPropionibacterium_freudenreichii0.1426.92e-102.68e-09
genusEggerthella0.1418.96e-103.44e-09
genusKlebsiella-0.1419.18e-103.49e-09
classGammaproteobacteria-0.1382.07e-097.82e-09
phylumFusobacteria-0.1382.27e-098.37e-09
classFusobacteriia-0.1382.27e-098.37e-09
orderFusobacteriales-0.1382.27e-098.37e-09
familyFusobacteriaceae-0.1372.46e-099e-09
speciesMegasphaera_micronuciformis-0.1372.9e-091.05e-08
genusBarnesiella0.1337.68e-092.75e-08
speciesBarnesiella_intestinihominis0.1337.68e-092.75e-08
genusFusobacterium-0.1337.94e-092.82e-08
familyBacteroidales_noname0.1329.74e-093.38e-08
genusBacteroidales_noname0.1329.74e-093.38e-08
speciesBacteroidales_bacterium_ph80.1329.74e-093.38e-08
familyPropionibacteriaceae0.1321.12e-083.86e-08
speciesEubacterium_ventriosum0.131.89e-086.46e-08
genusVeillonella-0.1282.9e-089.85e-08
genusButyrivibrio0.1282.93e-089.88e-08
speciesSubdoligranulum_sp_4_3_54A2FAA0.1283.06e-081.02e-07
speciesEggerthella_unclassified0.1264.17e-081.39e-07
genusOlsenella0.1264.31e-081.42e-07
speciesMegamonas_hypermegale0.1264.39e-081.44e-07
speciesStreptococcus_parasanguinis0.1255.83e-081.9e-07
orderPseudomonadales0.1248.4e-082.72e-07
speciesLactobacillus_casei_paracasei0.1239.48e-083.04e-07
speciesVeillonella_dispar-0.1221.24e-073.95e-07
speciesOlsenella_unclassified0.1221.28e-074.05e-07
speciesVeillonella_parvula-0.1221.3e-074.09e-07
speciesStreptococcus_salivarius0.1211.65e-075.16e-07
genusRothia0.122.09e-076.49e-07
speciesAlistipes_sp_AP110.122.14e-076.6e-07
speciesCampylobacter_concisus-0.122.17e-076.65e-07
familyMicrococcaceae0.1192.39e-077.28e-07
speciesVeillonella_atypica-0.1192.69e-078.14e-07
speciesFusobacterium_mortiferum-0.1192.71e-078.15e-07
genusMegasphaera-0.1173.85e-071.15e-06
familySiphoviridae0.1174.29e-071.27e-06
speciesLactobacillus_rhamnosus0.1164.87e-071.44e-06
familyClostridiales_Family_XI_Incertae_Sedis0.1155.66e-071.66e-06
familyPeptostreptococcaceae0.1155.88e-071.71e-06
speciesRoseburia_hominis0.1155.96e-071.73e-06
speciesBlautia_producta0.1147.09e-072.04e-06
speciesBacteroides_fragilis-0.1148.34e-072.39e-06
genusLeuconostoc0.1111.37e-063.87e-06
speciesFusobacterium_varium-0.1111.37e-063.87e-06
speciesClostridium_nexile-0.1111.39e-063.91e-06
speciesMethanobrevibacter_unclassified0.111.72e-064.8e-06
speciesAlistipes_senegalensis0.111.89e-065.25e-06
speciesButyrivibrio_unclassified0.1092.25e-066.21e-06
genusPeptostreptococcaceae_noname0.1082.99e-068.16e-06
speciesEnterococcus_faecium0.1082.99e-068.16e-06
speciesRothia_mucilaginosa0.1073.38e-069.17e-06
genusActinobacillus-0.1073.72e-069.92e-06
speciesActinobacillus_unclassified-0.1073.72e-069.92e-06
speciesBacteroides_vulgatus-0.1073.72e-069.92e-06
speciesMitsuokella_unclassified0.1063.95e-061.05e-05
speciesEubacterium_rectale0.1064e-061.05e-05
phylumViruses_noname0.1064.67e-061.22e-05
classViruses_noname0.1064.67e-061.22e-05
genusRuminococcaceae_noname0.1054.95e-061.28e-05
speciesRuminococcaceae_bacterium_D160.1054.95e-061.28e-05
genusMitsuokella0.1055.4e-061.39e-05
genusEnterobacter-0.1055.53e-061.41e-05
speciesFusobacterium_ulcerans-0.1055.91e-061.5e-05
speciesLactobacillus_mucosae-0.1045.95e-061.5e-05
speciesBacteroides_plebeius-0.1046.26e-061.57e-05
genusC2likevirus0.1046.66e-061.66e-05
orderCaudovirales0.1047.18e-061.78e-05
speciesGemella_morbillorum0.1037.76e-061.92e-05
speciesC2likevirus_unclassified0.1038.04e-061.98e-05
genusSiphoviridae_noname0.1038.19e-062e-05
genusCampylobacter-0.1029.45e-062.3e-05
speciesEnterobacter_cloacae-0.11.34e-053.24e-05
classEpsilonproteobacteria-0.11.36e-053.26e-05
orderCampylobacterales-0.11.36e-053.26e-05
genusAggregatibacter-0.11.38e-053.29e-05
familyCampylobacteraceae-0.11.6e-053.79e-05
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speciesEubacterium_sp_3_1_310.0650.004830.00877
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speciesBacteroides_nordii-0.0580.01170.0194
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speciesBacteroides_dorei-0.0580.01270.0208
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genusSutterellaceae_unclassified-0.0450.05150.076
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speciesBacteroides_coprocola-0.0450.05370.0787
speciesCoprobacillus_sp_D60.0440.05970.0872
speciesLactococcus_phage_bIL670.0430.06460.0941
speciesStreptococcus_pasteurianus-0.0420.06660.0967
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0420.06830.0989
speciesEnterobacteria_phage_HK544-0.0420.06930.1
speciesParabacteroides_johnsonii0.0420.07190.103
speciesStreptococcus_lutetiensis0.0420.07260.104
speciesErysipelotrichaceae_bacterium_3_1_530.0410.07540.108
speciesLactococcus_phage_jm20.0410.07790.111
speciesClostridium_sp_L2_500.0410.07820.111
speciesOdoribacter_splanchnicus-0.0390.0880.125
classDeltaproteobacteria0.0390.08890.125
orderDesulfovibrionales0.0390.08890.125
familyDesulfovibrionaceae0.0390.08890.125
speciesParaprevotella_clara0.0390.09110.128
genusBurkholderiales_noname-0.0390.09250.129
speciesBurkholderiales_bacterium_1_1_47-0.0390.09250.129
speciesMitsuokella_multacida-0.0380.10.139
speciesRoseburia_intestinalis0.0380.1050.145
speciesBacteroides_sp_3_1_19-0.0370.1110.153
speciesBilophila_wadsworthia0.0370.1110.153
genusAcidaminococcus0.0370.1140.156
genusStaphylococcus0.0360.1180.161
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familyBurkholderiales_noname-0.0360.1240.168
speciesBacteroides_clarus0.0360.1240.168
genusParasutterella-0.0350.1270.171
speciesParasutterella_excrementihominis-0.0350.1270.171
speciesLachnospiraceae_bacterium_8_1_57FAA0.0350.130.175
genusBilophila0.0350.1320.176
speciesAlistipes_unclassified0.0350.1320.176
genusPhascolarctobacterium-0.0350.1330.177
speciesPhascolarctobacterium_succinatutens-0.0350.1330.177
speciesLactobacillus_gasseri0.0340.1420.188
speciesOscillibacter_sp_KLE_17450.0340.1440.19
speciesAcidaminococcus_unclassified0.0330.1490.196
speciesBilophila_unclassified0.0330.1540.202
speciesLactococcus_phage_phi70.0330.1580.207
speciesPeptostreptococcus_anaerobius0.0320.1610.211
speciesLachnospiraceae_bacterium_6_1_63FAA0.0310.1770.231
speciesLactobacillus_ruminis-0.0310.1780.231
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0310.1840.239
speciesStreptococcus_anginosus0.0310.1860.241
genusSutterella-0.030.1970.254
speciesKlebsiella_sp_MS_92_3-0.0290.2030.261
genusClostridiaceae_noname0.0290.2050.262
speciesClostridiaceae_bacterium_JC1180.0290.2050.262
speciesParabacteroides_unclassified-0.0290.2050.262
speciesBifidobacterium_pseudocatenulatum0.0290.2160.275
speciesAlistipes_finegoldii0.0290.2180.277
speciesClostridium_bolteae0.0280.220.278
familyPodoviridae0.0270.2410.304
speciesBacteroides_pectinophilus0.0270.2510.316
familyPorphyromonadaceae-0.0260.2520.316
genusPyramidobacter-0.0260.2550.318
speciesPyramidobacter_piscolens-0.0260.2550.318
speciesClostridium_hathewayi0.0260.2550.318
speciesRuminococcus_gnavus-0.0260.2620.325
phylumSynergistetes-0.0260.2640.325
classSynergistia-0.0260.2640.325
orderSynergistales-0.0260.2640.325
familySynergistaceae-0.0260.2640.325
speciesAlistipes_sp_HGB50.0260.2680.329
speciesBacteroides_salyersiae-0.0250.2790.341
speciesAlistipes_putredinis0.0250.2840.346
speciesCoprobacillus_sp_29_10.0250.2890.352
genusOdoribacter-0.0240.2920.354
speciesPorphyromonas_uenonis0.0240.2940.354
familyRikenellaceae0.0240.2950.354
genusAlistipes0.0240.2950.354
speciesEubacterium_dolichum0.0240.2950.354
speciesBacteroides_fluxus0.0240.2990.358
speciesBacteroides_eggerthii0.0240.3050.364
speciesOscillibacter_sp_KLE_1728-0.0230.3120.372
speciesStreptococcus_infantarius-0.0230.3250.386
speciesPrevotella_bivia-0.0220.3390.402
genusFlavonifractor-0.0220.3410.402
speciesFlavonifractor_plautii-0.0220.3410.402
speciesLactobacillus_amylovorus0.0220.3480.41
speciesClostridium_clostridioforme0.0210.3550.417
speciesLactobacillus_crispatus0.0210.3640.426
speciesWeissella_cibaria0.0210.3650.426
familyViruses_noname-0.020.3780.438
genusViruses_noname-0.020.3780.438
speciesLactobacillus_vaginalis0.020.3780.438
speciesBifidobacterium_angulatum-0.020.3810.441
speciesStreptococcus_phage_Sfi210.020.3950.456
speciesClostridiales_bacterium_1_7_47FAA-0.020.3990.459
genusMethanosphaera0.0190.4130.472
speciesMethanosphaera_stadtmanae0.0190.4130.472
speciesEscherichia_unclassified-0.0190.4130.472
speciesBacteroides_sp_4_3_47FAA-0.0190.4160.474
speciesAlistipes_shahii0.0190.420.478
speciesDialister_succinatiphilus0.0190.4240.481
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speciesDesulfovibrio_piger0.0170.4550.514
speciesSutterella_wadsworthensis-0.0170.4710.531
familyClostridiales_noname0.0170.4740.533
speciesLactobacillus_sanfranciscensis0.0170.4750.533
speciesRuminococcus_callidus0.0160.4850.542
speciesParaprevotella_unclassified0.0160.4890.546
genusRoseburia-0.0150.5170.575
genusParaprevotella0.0150.5180.575
genusMyoviridae_noname0.0150.5220.578
speciesCollinsella_tanakaei-0.0150.5240.579
speciesClostridium_symbiosum-0.0150.5250.579
genusProteus-0.0150.5290.582
genusButyricicoccus0.0140.5330.584
speciesButyricicoccus_pullicaecorum0.0140.5330.584
speciesClostridium_citroniae0.0130.560.612
speciesDorea_unclassified-0.0130.5650.616
speciesKlebsiella_phage_KP36-0.0130.580.631
genusLambdalikevirus0.0130.5890.639
speciesSlackia_piriformis0.0120.5930.642
speciesParabacteroides_goldsteinii-0.0120.610.659
speciesBacteroides_sp_2_1_22-0.0110.620.668
speciesParabacteroides_sp_D13-0.0110.6330.681
genusWeissella0.0110.6350.681
speciesBifidobacterium_dentium0.0110.6390.684
speciesCollinsella_unclassified0.0110.6480.692
speciesParabacteroides_merdae-0.010.6550.698
speciesAcidaminococcus_fermentans0.010.6690.711
speciesLactobacillus_reuteri0.0090.6870.729
speciesLactococcus_phage_936_sensu_lato0.0090.7090.75
speciesLeuconostoc_lactis0.0080.7230.763
speciesAcidaminococcus_intestini0.0080.7270.766
genusCatenibacterium0.0080.7340.77
speciesCatenibacterium_mitsuokai0.0080.7340.77
speciesBacteroides_barnesiae0.0070.7520.787
speciesLactobacillus_fermentum-0.0070.7650.799
speciesHoldemania_sp_AP2-0.0060.8040.838
speciesParaprevotella_xylaniphila0.0050.8290.862
genusTunalikevirus-0.0050.8320.863
familyMyoviridae-0.0050.8390.868
speciesLactobacillus_oris-0.0040.8460.874
speciesKlebsiella_oxytoca-0.0040.8620.888
speciesKlebsiella_unclassified-0.0040.8650.889
genusClostridiales_noname-0.0030.8840.907
genusSlackia0.0030.8960.917
speciesBacteroides_sp_1_1_60.0030.9030.923
speciesBifidobacterium_breve-0.0030.9050.923
speciesCollinsella_intestinalis-0.0020.9160.931
speciesWeissella_confusa0.0020.9170.931
speciesMegasphaera_elsdenii0.0020.9410.953
familyAcidaminococcaceae-0.0020.9470.957
genusMorganella0.0010.9580.964
speciesMorganella_morganii0.0010.9580.964
speciesLactococcus_garvieae0.0010.9670.971
genusFaecalibacterium0.00.9850.985
speciesFaecalibacterium_prausnitzii0.00.9850.985
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.02300140251780.03069656278910.000110114113132521617.5216
Type II diabetesDenmark752770.04489181163080.03134797320210.00465292302658350611.4924
Type II diabetesChina1831850.03438467704320.02969555315090.0452253679272671122.1785
Colorectal cancerAustria64350.05616272414420.07049153807830.0944358658782487116.4806
ObesityDenmark1691230.02961693636310.03425888561880.2211372704541175838.6636
Rheumatoid arthritisChina127980.0411240746140.03906523003170.222590993974972832.4407
Type II diabetesSweden53920.0501838399490.04820796537190.4432132751631478350.061
Ulcerative colitisSpain78660.0444422144260.04058868959650.5151979818281948464.2739
Crohns diseaseSpain17660.03873060849570.04058868959650.8170681842982793492.8811
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382