MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:02:27 PST
Job id & description: 2390, purine10
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
764285508-stool1_revised3295339CompleteK05810COG1496FirmicutesTuricibacter100.0100.0100.0
O2.CD1-0-PT_GL00334193303890CompleteK05810COG1496FirmicutesBlautia100.0100.0100.0
MH0016_GL00873153296489CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
MH0101_GL00611963297473CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
T2D-68A_GL00756943293955CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0266_GL01267603300182CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
SZEY-66A_GL00780663309295CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
MH0188_GL01947683298803CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
N085A_GL00643473309113CompleteK05810NOG134282Bacteroidetesunknown100.0100.0100.0
MH0004_GL00235583296108CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
MH0181_GL00335683298644CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0198_GL01751813299124CompleteK05810COG1496unknownunknown100.0100.0100.0
NOM023_GL00341783308721CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
V1.FI02_GL01338663306284CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC55-2_GL00443613305226CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0025_GL00721743296558CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0094_GL00546423297286CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
DLF014_GL00053083308072CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0267_GL00900023300198CompleteK05810COG1496Bacteroidetesunknown100.0100.0100.0
O2.UC7-0_GL00853843305311CompleteK05810NOG134282BacteroidetesBacteroides100.0100.0100.0
160765029-stool1_revised3295027CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0013_GL00161883296421CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
MH0075_GL00663613297049CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0181_GL01142413298654CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0366_GL01303883301757CompleteK00772COG0005unknownunknown100.0100.0100.0
SZEY-24A_GL00244843309208Lack 5'-endK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
MH0092_GL01046283297260CompleteK05810NOG134282BacteroidetesBacteroides100.0100.0100.0
MH0415_GL00137123302828CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC15-1_GL01017573304193CompleteK03783COG0005FirmicutesDorea100.0100.0100.0
V1.CD20-4_GL00861613305576CompleteK03783COG0005FirmicutesBlautia100.0100.0100.0
V1.UC52-1_GL01219583307759CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
765560005-stool1_revised3295490CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0057_GL00089073296887CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0191_GL00473673298917CompleteK03783COG0005FirmicutesDorea100.0100.0100.0
MH0230_GL01601223299583CompleteK03783COG0005FirmicutesDorea100.0100.0100.0
MH0290_GL00924803300596CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
V1.FI11_GL00749373306461CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
MH0012_GL02273193296409CompleteK05810NOG134282unknownunknown100.0100.0100.0
MH0066_GL00230053296973Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0105_GL00688873297553CompleteK00777COG2820unknownunknown100.0100.0100.0
MH0130_GL00519303297945CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0261_GL00040003300084CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0370_GL00961443301878CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC12-1_GL01469493304117CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD6-0-PN_GL01493193306150CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0023_GL00254273296539CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0016_GL00828343296487CompleteK05810COG1496BacteroidetesParabacteroides100.0100.0100.0
MH0097_GL00866073297371CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0447_GL02605723303607Lack 5'-endK03783COG0005BacteroidetesPrevotella100.0100.0100.0
MH0458_GL00400633303841CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD15-3_GL00351633305484CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
MH0006_GL00375563296132CompleteK05810COG1496BacteroidetesCapnocytophaga100.0100.0100.0
MH0188_GL01719943298793CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0372_GL00943533301946CompleteK03783COG0005FirmicutesCoprobacillus100.0100.0100.0
T2D-91A_GL00539993294060CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
158499257-stool2_revised3294524CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0040_GL00771703296693CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0415_GL00442483302837CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-108A_GL01113263293289CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-63A_GL00413473293920CompleteK03783COG0005FirmicutesStreptococcus100.0100.0100.0
638301.HMPREF0444_05413295911CompleteK03783COG0005FirmicutesGranulicatella100.0100.0100.0
DLM019_GL00404463308202CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0050_GL00043123296760CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0057_GL00407753296898CompleteK05810NOG134282BacteroidetesParaprevotella100.0100.0100.0
MH0389_GL01681423302340CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0411_GL01562283302782CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0453_GL00461993303752CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC12-0_GL00198953304089CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI17_GL01643443306661CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC54-4_GL00095333307813CompleteK03783COG0005unknownunknown100.0100.0100.0
764487809-stool1_revised3295372CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0211_GL00958443299328CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC35-1_GL00735033304699CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC48-0_GL00198803305001CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC17-2_GL00959173307183CompleteK05810COG1496FirmicutesPeptostreptococcus100.0100.0100.0
V1.UC43-0_GL00067853307586CompleteK05810COG1496unknownunknown100.0100.0100.0
638754422-stool1_revised3295072CompleteK03783COG0005unknownunknown100.0100.0100.0
DOF010_GL00113983308290CompleteK03783COG0005FirmicutesStreptococcus100.0100.0100.0
MH0187_GL01144943298725CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0369_GL01156033301825CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.CD2-0-PT_GL00588883303935CompleteK03783COG0005FirmicutesCoprobacillus100.0100.0100.0
V1.CD18-0_GL00711163305543CompleteK03783COG0005FirmicutesStreptococcus100.0100.0100.0
158458797-stool1_revised3294400CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0110_GL00399253297610CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0355_GL01373183301519CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0252_GL02141893299969CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0323_GL01155883301012CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0012_GL01801103296391CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC28-1_GL01064303304531CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0410_GL01681673302764CompleteK03783COG0005unknownunknown100.0100.0100.0
NLM027_GL00093023292469Lack 5'-endK03783COG0005FirmicutesStreptococcus100.0100.0100.0
V1.CD15-3_GL00930203305501CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.UC49-1_GL01850123307661CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0217_GL00324543299370CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0337_GL00483133301240CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.FI20_GL01036053306726CompleteK05810COG1496unknownunknown100.0100.0100.0
DLM014_GL00525333308183CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0116_GL00825233297696CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0429_GL00806023303135CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0309_GL01341063300789CompleteK03783COG0005unknownunknown100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesPrevotella_copri0.4436.21e-912.93e-88
genusPrevotella0.4324.38e-861.03e-83
classBacteroidia0.4262.39e-832.32e-81
orderBacteroidales0.4262.39e-832.32e-81
phylumBacteroidetes0.4262.46e-832.32e-81
familyPrevotellaceae0.416.95e-775.47e-75
classClostridia-0.3855.62e-673.32e-65
orderClostridiales-0.3855.63e-673.32e-65
phylumFirmicutes-0.3826.29e-663.3e-64
familyLachnospiraceae-0.3036.47e-413.05e-39
familyRuminococcaceae-0.2955.48e-392.35e-37
speciesAnaerostipes_hadrus-0.2676.94e-322.73e-30
genusRuminococcus-0.2644.09e-311.48e-29
speciesEubacterium_hallii-0.253.81e-281.28e-26
speciesLachnospiraceae_bacterium_5_1_63FAA-0.2463.87e-271.22e-25
genusAnaerostipes-0.2399.88e-262.91e-24
speciesRuminococcus_obeum-0.2341.24e-243.44e-23
genusBlautia-0.236.19e-241.62e-22
phylumActinobacteria-0.2291.32e-233.12e-22
classActinobacteria-0.2291.32e-233.12e-22
genusDorea-0.2198.23e-221.85e-20
familyEubacteriaceae-0.2156.11e-211.31e-19
genusEubacterium-0.2156.36e-211.31e-19
speciesRuminococcus_sp_5_1_39BFAA-0.2122.06e-204.05e-19
speciesRuminococcus_torques-0.1984.8e-189.06e-17
orderBifidobacteriales-0.1961.15e-172.01e-16
familyBifidobacteriaceae-0.1961.15e-172.01e-16
genusBifidobacterium-0.1934.05e-176.83e-16
orderActinomycetales-0.1925.57e-179.07e-16
genusPeptostreptococcaceae_noname-0.191.3e-162.05e-15
familyPeptostreptococcaceae-0.1882.12e-163.23e-15
orderCoriobacteriales-0.1882.3e-163.29e-15
familyCoriobacteriaceae-0.1882.3e-163.29e-15
speciesBifidobacterium_longum-0.1831.3e-151.8e-14
speciesRuminococcus_bromii-0.1831.65e-152.23e-14
speciesDorea_formicigenerans-0.1822.52e-153.3e-14
genusLachnospiraceae_noname-0.185.03e-156.42e-14
speciesBacteroides_xylanisolvens0.1743.64e-144.52e-13
genusCoprococcus-0.1711.02e-131.23e-12
genusActinomyces-0.1682.23e-132.63e-12
speciesCoprococcus_comes-0.1682.92e-133.36e-12
familyActinomycetaceae-0.1673.3e-133.71e-12
speciesSubdoligranulum_unclassified-0.1674.16e-134.57e-12
speciesStreptococcus_thermophilus-0.1665.18e-135.56e-12
genusSubdoligranulum-0.1641.06e-121.11e-11
speciesBacteroides_caccae0.1621.75e-121.8e-11
genusParabacteroides0.1594.48e-124.23e-11
genusStreptococcus-0.1594.55e-124.23e-11
familyStreptococcaceae-0.1594.58e-124.23e-11
phylumVerrucomicrobia-0.1594.93e-124.23e-11
classVerrucomicrobiae-0.1594.93e-124.23e-11
orderVerrucomicrobiales-0.1594.93e-124.23e-11
familyVerrucomicrobiaceae-0.1594.93e-124.23e-11
genusAkkermansia-0.1594.93e-124.23e-11
speciesAkkermansia_muciniphila-0.1594.93e-124.23e-11
speciesCoprococcus_catus-0.1586.77e-125.71e-11
speciesErysipelotrichaceae_bacterium_21_3-0.1587.02e-125.81e-11
speciesBacteroides_faecis0.1578.18e-126.66e-11
speciesDorea_longicatena-0.1551.81e-111.45e-10
speciesEubacterium_ramulus-0.1542.24e-111.76e-10
orderBurkholderiales0.1542.48e-111.92e-10
classBetaproteobacteria0.1523.92e-112.98e-10
familySutterellaceae0.158.02e-116.01e-10
familyMicrococcaceae-0.1462.13e-101.57e-09
genusRothia-0.1462.41e-101.74e-09
orderLactobacillales-0.1462.44e-101.74e-09
classBacilli-0.1453.19e-102.25e-09
genusAdlercreutzia-0.1426.83e-104.67e-09
speciesAdlercreutzia_equolifaciens-0.1426.83e-104.67e-09
speciesBacteroides_ovatus0.1418.1e-105.46e-09
speciesRothia_mucilaginosa-0.1418.37e-105.56e-09
speciesPrevotella_stercorea0.141.19e-097.8e-09
speciesBifidobacterium_adolescentis-0.141.23e-097.95e-09
speciesEubacterium_rectale-0.1381.83e-091.17e-08
speciesStreptococcus_parasanguinis-0.1382.27e-091.43e-08
genusGordonibacter-0.1373e-091.84e-08
speciesGordonibacter_pamelaeae-0.1373e-091.84e-08
genusButyrivibrio-0.1329.13e-095.52e-08
speciesStreptococcus_salivarius-0.1321.09e-086.51e-08
speciesPeptostreptococcaceae_noname_unclassified-0.1311.23e-087.26e-08
speciesStreptococcus_sanguinis-0.131.62e-089.44e-08
speciesClostridium_bartlettii-0.1282.55e-081.47e-07
speciesBacteroides_fragilis0.1273.51e-082e-07
familyPorphyromonadaceae0.1221.22e-076.86e-07
speciesMegamonas_unclassified0.1221.35e-077.5e-07
genusMegamonas0.1211.45e-077.96e-07
speciesParaprevotella_xylaniphila0.1211.48e-078.03e-07
genusTuricibacter-0.1211.63e-078.74e-07
speciesLactobacillus_casei_paracasei-0.1173.63e-071.93e-06
speciesButyrivibrio_unclassified-0.1173.89e-072.04e-06
speciesTuricibacter_sanguinis-0.1174.02e-072.09e-06
speciesPropionibacterium_freudenreichii-0.1164.79e-072.46e-06
speciesAnaerotruncus_unclassified-0.1164.98e-072.53e-06
genusParaprevotella0.1165.22e-072.62e-06
speciesMegasphaera_unclassified0.1165.34e-072.65e-06
speciesKlebsiella_pneumoniae0.1165.5e-072.7e-06
speciesLactococcus_phage_P680-0.1147.42e-073.61e-06
genusPseudoflavonifractor-0.1147.6e-073.62e-06
speciesPseudoflavonifractor_capillosus-0.1147.6e-073.62e-06
speciesParaprevotella_unclassified0.1147.93e-073.74e-06
speciesTuricibacter_unclassified-0.1121.13e-065.28e-06
speciesBacteroides_thetaiotaomicron0.1121.25e-065.78e-06
speciesClostridium_leptum-0.1111.36e-066.23e-06
speciesEubacterium_siraeum-0.1111.42e-066.44e-06
speciesCollinsella_aerofaciens-0.1111.5e-066.74e-06
speciesParabacteroides_merdae0.1111.62e-067.21e-06
speciesMegamonas_hypermegale0.111.87e-068.25e-06
genusMegasphaera0.1092.18e-069.53e-06
genusCollinsella-0.1073.35e-061.45e-05
speciesMethanobrevibacter_smithii-0.1064.24e-061.82e-05
genusPropionibacterium-0.1064.32e-061.84e-05
genusRoseburia-0.1046.05e-062.55e-05
speciesBlautia_hydrogenotrophica-0.1046.36e-062.66e-05
speciesMegamonas_rupellensis0.1037.64e-063.16e-05
speciesBacteroides_salyersiae0.1037.76e-063.18e-05
familyBacillales_noname-0.1038.19e-063.3e-05
genusGemella-0.1038.19e-063.3e-05
speciesBacteroides_eggerthii0.1029.25e-063.7e-05
orderBacillales-0.1029.54e-063.78e-05
genusMethanobrevibacter-0.1021.03e-054.05e-05
speciesStreptococcus_mitis_oralis_pneumoniae-0.1011.21e-054.72e-05
genusEggerthella-0.1011.26e-054.87e-05
phylumEuryarchaeota-0.11.4e-055.37e-05
speciesRoseburia_intestinalis-0.11.61e-056.13e-05
classMethanobacteria-0.0991.83e-056.8e-05
orderMethanobacteriales-0.0991.83e-056.8e-05
familyMethanobacteriaceae-0.0991.83e-056.8e-05
speciesOdoribacter_splanchnicus0.0982.25e-058.3e-05
speciesEggerthella_lenta-0.0963.02e-050.00011
speciesParaprevotella_clara0.0963.03e-050.00011
genusOdoribacter0.0963.13e-050.000113
speciesLactococcus_lactis-0.0963.28e-050.000117
speciesRuminococcus_lactaris-0.0963.33e-050.000118
genusSolobacterium-0.0963.39e-050.000118
speciesSolobacterium_moorei-0.0963.39e-050.000118
speciesDialister_invisus-0.0963.41e-050.000118
speciesStreptococcus_vestibularis-0.0944.66e-050.000161
familyPropionibacteriaceae-0.0926.19e-050.000212
speciesLactobacillus_delbrueckii-0.0926.48e-050.00022
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0926.59e-050.000222
speciesLactobacillus_rhamnosus-0.0918.27e-050.000277
speciesClostridium_citroniae0.0918.69e-050.000289
genusKlebsiella0.099.53e-050.000315
orderPseudomonadales-0.099.71e-050.000317
phylumProteobacteria0.099.75e-050.000317
speciesMegamonas_funiformis0.090.0001010.000327
speciesEggerthella_unclassified-0.0890.0001060.00034
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0880.0001430.000456
speciesEubacterium_ventriosum-0.0880.0001450.000459
genusSiphoviridae_noname-0.0870.0001590.0005
speciesMitsuokella_unclassified-0.0860.0001850.000578
familyBacteroidaceae0.0860.0002030.000626
genusBacteroides0.0860.0002030.000626
speciesClostridiales_bacterium_1_7_47FAA0.0840.0002550.000782
genusDialister-0.0840.0002570.000783
speciesBacteroides_uniformis-0.0840.0002720.000823
speciesStreptococcus_gordonii-0.0830.0003220.000968
speciesBacteroides_nordii0.0830.0003250.000971
genusButyricimonas0.0830.0003360.000991
speciesButyricimonas_synergistica0.0830.0003360.000991
genusCatenibacterium0.0830.0003410.000994
speciesCatenibacterium_mitsuokai0.0830.0003410.000994
speciesBacteroides_coprocola0.0820.000370.00107
speciesLactococcus_phage_jm2-0.0810.0004460.00128
speciesStreptococcus_mutans-0.0810.0004690.00134
speciesBilophila_unclassified0.0810.0004760.00135
speciesHoldemania_filiformis-0.0810.0004840.00137
genusBilophila0.080.0005030.00141
speciesStreptococcus_infantarius0.0790.0006370.00178
genusSutterella0.0790.000650.0018
genusMitsuokella-0.0780.0006960.00192
phylumViruses_noname-0.0780.0007430.00203
classViruses_noname-0.0780.0007430.00203
speciesBacteroides_finegoldii0.0780.0007770.00211
speciesAlistipes_indistinctus0.0770.0008110.00219
speciesBacteroides_coprophilus0.0770.0008320.00223
genusPyramidobacter0.0770.0009120.00242
speciesPyramidobacter_piscolens0.0770.0009120.00242
speciesBifidobacterium_catenulatum-0.0760.001040.00274
speciesEnterococcus_faecium-0.0750.001140.00299
speciesAlistipes_putredinis0.0750.001150.003
genusLactococcus-0.0750.001180.00306
familySiphoviridae-0.0750.001210.00312
classDeltaproteobacteria0.0750.001250.00317
orderDesulfovibrionales0.0750.001250.00317
familyDesulfovibrionaceae0.0750.001250.00317
speciesParabacteroides_johnsonii0.0740.001370.00346
familyLactobacillaceae-0.0740.001390.00349
genusLeuconostoc-0.0740.001410.00352
genusFlavonifractor0.0740.001470.00363
speciesFlavonifractor_plautii0.0740.001470.00363
speciesEggerthella_sp_1_3_56FAA-0.0730.001610.00396
speciesCoprococcus_eutactus-0.0730.001670.00408
genusHoldemania-0.0730.001680.00409
speciesSutterella_wadsworthensis0.0720.00190.0046
speciesClostridium_symbiosum0.0710.001990.00479
phylumSynergistetes0.070.002570.00607
classSynergistia0.070.002570.00607
orderSynergistales0.070.002570.00607
familySynergistaceae0.070.002570.00607
familyRikenellaceae0.0690.00270.00631
genusAlistipes0.0690.00270.00631
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0690.002740.00637
speciesBifidobacterium_dentium-0.0680.003420.00791
orderCaudovirales-0.0670.003510.00808
genusLactobacillus-0.0670.003570.00818
speciesClostridium_sp_ATCC_BAA_4420.0670.003710.00846
speciesBilophila_wadsworthia0.0670.003960.00899
speciesAlistipes_shahii0.0670.004010.00906
speciesEscherichia_coli0.0660.004340.00975
genusAnaerotruncus-0.0650.004610.0103
genusPeptoniphilus0.0650.004730.0105
speciesAnaerostipes_unclassified0.0650.004860.0108
speciesStreptococcus_australis-0.0640.005610.0124
speciesRuminococcus_sp_JC304-0.0640.005950.013
genusSutterellaceae_unclassified0.0640.005970.013
genusOlsenella-0.0640.006010.0131
speciesAcidaminococcus_intestini0.0630.006540.0142
speciesRuminococcus_callidus0.0630.006590.0142
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familyEnterobacteriaceae0.0620.007040.015
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0620.007590.0161
speciesCollinsella_tanakaei0.0620.007760.0164
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genusClostridiales_noname0.0610.008560.0176
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genusOscillibacter0.060.009320.019
speciesLactobacillus_fermentum-0.0590.01040.0211
speciesFusobacterium_ulcerans0.0590.01060.0213
speciesC2likevirus_unclassified-0.0590.01060.0213
genusEnterococcus-0.0580.0120.024
genusAcidaminococcus0.0580.01210.024
speciesOscillibacter_unclassified0.0580.01210.024
speciesParabacteroides_goldsteinii0.0570.01310.0259
speciesLactobacillus_gasseri-0.0570.01320.026
speciesEnterococcus_faecalis-0.0570.01350.0264
classNegativicutes0.0570.01370.0266
orderSelenomonadales0.0570.01370.0266
familyEnterococcaceae-0.0570.01390.0269
speciesClostridium_bolteae0.0570.01450.0279
speciesLactobacillus_mucosae0.0560.0150.0288
speciesErysipelotrichaceae_bacterium_6_1_45-0.0560.01550.0296
classGammaproteobacteria0.0560.01570.0298
speciesMitsuokella_multacida0.0560.01570.0298
genusC2likevirus-0.0550.01650.0312
speciesLactococcus_phage_phi7-0.0550.01730.0325
genusEscherichia0.0540.01860.0348
speciesEubacterium_cylindroides-0.0530.02090.039
speciesOlsenella_unclassified-0.0530.02120.0394
speciesAlistipes_unclassified-0.0530.02140.0396
familyAcidaminococcaceae0.0530.02160.0398
speciesRoseburia_unclassified-0.0520.02360.0433
genusRuminococcaceae_noname-0.0520.02390.0436
speciesRuminococcaceae_bacterium_D16-0.0520.02390.0436
speciesBacteroides_stercoris0.0510.02620.0476
speciesAnaerotruncus_colihominis0.0490.0330.0597
speciesRoseburia_hominis-0.0490.03330.06
speciesPorphyromonas_asaccharolytica0.0480.03720.0668
genusPhascolarctobacterium0.0480.03770.0671
speciesPhascolarctobacterium_succinatutens0.0480.03770.0671
speciesEubacterium_limosum0.0480.03790.0673
speciesBacteroides_oleiciplenus0.0480.03820.0673
speciesPrevotella_bivia0.0480.03820.0673
speciesAlistipes_onderdonkii-0.0480.03890.0683
orderViruses_noname-0.0480.03930.0687
speciesMegasphaera_elsdenii0.0470.04080.0711
genusPorphyromonas0.0460.04780.0829
speciesClostridium_hathewayi0.0450.05220.0901
speciesBifidobacterium_animalis-0.0450.05230.0901
familyLeuconostocaceae-0.0440.05940.102
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0430.06020.103
speciesParabacteroides_distasonis0.0430.06040.103
speciesParabacteroides_unclassified0.0430.06210.105
speciesClostridium_nexile0.0430.06420.109
speciesAcidaminococcus_unclassified0.0420.06750.114
speciesLactobacillus_ruminis0.0410.07740.13
speciesHaemophilus_paraphrohaemolyticus-0.0410.07870.131
speciesGemella_morbillorum-0.0410.07880.131
speciesFusobacterium_varium0.040.08030.133
speciesLachnospiraceae_bacterium_1_4_56FAA-0.040.08330.138
genusBarnesiella-0.040.08420.138
speciesBarnesiella_intestinihominis-0.040.08420.138
speciesBacteroides_sp_3_1_190.040.08490.139
genusStaphylococcus-0.040.0850.139
speciesOscillibacter_sp_KLE_17450.0390.09050.147
classErysipelotrichia-0.0390.09290.149
orderErysipelotrichales-0.0390.09290.149
familyErysipelotrichaceae-0.0390.09290.149
speciesLactobacillus_plantarum-0.0390.09310.149
speciesLactobacillus_acidophilus-0.0380.09840.157
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.0380.1030.164
speciesCoprococcus_sp_ART55_1-0.0380.1030.164
speciesAcidaminococcus_fermentans0.0370.1050.166
familyBacteroidales_noname-0.0370.1060.166
genusBacteroidales_noname-0.0370.1060.166
speciesBacteroidales_bacterium_ph8-0.0370.1060.166
speciesRuminococcus_champanellensis-0.0370.1070.167
speciesPorphyromonas_uenonis0.0370.1090.17
speciesBacteroides_intestinalis0.0370.110.171
speciesStreptococcus_lutetiensis0.0360.1210.187
genusPeptostreptococcus-0.0360.1230.189
speciesBlautia_producta-0.0360.1230.189
genusEnterobacter0.0350.130.199
speciesBacteroides_sp_2_1_220.0350.1330.203
speciesCitrobacter_freundii0.0350.1340.204
speciesSlackia_piriformis0.0340.1360.206
speciesMethanobrevibacter_unclassified-0.0340.1370.207
speciesEnterobacter_cloacae0.0340.1380.208
familyClostridiales_noname0.0330.1480.222
speciesBacteroides_pectinophilus-0.0330.150.225
phylumFusobacteria0.0330.1520.226
classFusobacteriia0.0330.1520.226
orderFusobacteriales0.0330.1520.226
genusPantoea0.0330.1530.226
speciesPantoea_unclassified0.0330.1530.226
speciesBacteroides_fluxus-0.0330.1540.226
speciesCoprobacillus_sp_29_10.0330.1540.226
genusMorganella0.0330.1560.227
speciesMorganella_morganii0.0330.1560.227
speciesPeptostreptococcus_stomatis-0.0330.1590.231
speciesDesulfovibrio_piger0.0320.1630.236
speciesWeissella_confusa0.0320.1650.238
speciesErysipelotrichaceae_bacterium_3_1_53-0.0320.1660.239
genusCitrobacter0.0320.170.244
speciesFusobacterium_mortiferum0.0310.180.257
familyStaphylococcaceae-0.0310.1860.265
genusButyricicoccus-0.030.190.269
speciesButyricicoccus_pullicaecorum-0.030.190.269
speciesCollinsella_unclassified-0.030.1990.28
speciesBacteroides_cellulosilyticus-0.030.1990.28
speciesHoldemania_unclassified-0.0290.2070.291
familyPodoviridae0.0290.2090.293
genusParasutterella0.0290.2150.299
speciesParasutterella_excrementihominis0.0290.2150.299
genusAcidaminococcaceae_unclassified-0.0280.220.305
familyVeillonellaceae0.0280.2290.317
speciesProteus_mirabilis0.0280.2310.319
speciesSutterella_parvirubra0.0270.2410.331
classEpsilonproteobacteria0.0270.2430.331
orderCampylobacterales0.0270.2430.331
speciesStreptococcus_pasteurianus0.0270.2440.331
speciesLactococcus_garvieae0.0270.2440.331
speciesBifidobacterium_angulatum0.0270.2440.331
familyFusobacteriaceae0.0270.2460.333
speciesHoldemania_sp_AP20.0270.2490.336
speciesClostridium_asparagiforme0.0270.250.336
genusMethanosphaera-0.0260.2610.349
speciesMethanosphaera_stadtmanae-0.0260.2610.349
speciesOdoribacter_unclassified-0.0250.2710.361
genusFusobacterium0.0250.2840.378
speciesCoprobacillus_sp_D60.0250.2850.378
speciesLactobacillus_crispatus-0.0250.2870.378
speciesBacteroides_massiliensis0.0250.2870.378
speciesLactobacillus_reuteri-0.0240.3080.405
genusDesulfovibrio0.0230.3180.416
genusSuccinatimonas0.0230.320.416
speciesSuccinatimonas_hippei0.0230.320.416
speciesCitrobacter_unclassified0.0230.320.416
genusActinobacillus-0.0230.330.427
speciesActinobacillus_unclassified-0.0230.330.427
genusCampylobacter0.0220.3330.429
genusVeillonella-0.0220.340.437
speciesAggregatibacter_segnis0.0220.3410.437
familyMyoviridae-0.0220.3490.446
speciesVeillonella_unclassified-0.0210.3540.452
speciesCampylobacter_concisus-0.0210.3680.467
speciesOdoribacter_laneus-0.0210.3680.467
familyCampylobacteraceae0.0210.3690.467
speciesOscillibacter_sp_KLE_17280.0210.3710.468
familySuccinivibrionaceae0.020.3910.492
speciesBacteroides_dorei0.0180.4330.544
speciesBifidobacterium_pseudocatenulatum0.0170.460.576
genusErysipelotrichaceae_noname-0.0170.4640.579
genusWeissella0.0170.4670.581
speciesKlebsiella_unclassified0.0170.4680.581
speciesRoseburia_inulinivorans-0.0160.4810.596
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0160.4830.597
genusClostridium-0.0160.4850.598
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0160.4940.607
speciesVeillonella_parvula-0.0150.5180.634
speciesEubacterium_sp_3_1_310.0150.5190.634
speciesAlistipes_finegoldii0.0150.520.634
familyClostridiaceae-0.0150.5220.635
speciesCoprobacillus_unclassified-0.0150.5250.637
speciesCoriobacteriaceae_bacterium_phI0.0150.5290.64
genusLambdalikevirus-0.0140.5360.647
orderAeromonadales0.0140.540.65
genusSlackia0.0140.5470.657
speciesHaemophilus_sputorum-0.0140.5550.664
speciesBacteroides_salanitronis-0.0140.5560.664
speciesRuminococcus_gnavus0.0140.5570.664
genusCoriobacteriaceae_noname0.0130.5620.668
speciesFusobacterium_nucleatum-0.0130.5650.67
familyViruses_noname0.0130.5730.676
genusViruses_noname0.0130.5730.676
speciesStreptococcus_anginosus-0.0130.5810.683
genusProteus0.0130.5820.683
speciesLactobacillus_sanfranciscensis-0.0120.5940.696
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0120.5960.696
speciesPrevotella_buccae0.0120.60.699
speciesEnterobacter_aerogenes0.0120.6030.701
speciesClostridium_perfringens0.0120.6080.705
speciesKlebsiella_phage_KP360.0120.6130.709
speciesAlistipes_sp_AP110.0120.6160.71
speciesPeptostreptococcus_anaerobius0.0120.6170.71
speciesBifidobacterium_breve0.0110.620.712
speciesDorea_unclassified0.0110.6250.716
speciesVeillonella_atypica0.0110.6340.724
familyBurkholderiales_noname0.0110.6350.724
genusBurkholderiales_noname0.010.6530.741
speciesBurkholderiales_bacterium_1_1_470.010.6530.741
speciesLachnospiraceae_bacterium_2_1_58FAA-0.010.6550.741
speciesLactococcus_phage_bIL670.010.6570.742
speciesLactococcus_phage_936_sensu_lato-0.010.660.743
speciesBifidobacterium_bifidum-0.010.6790.762
genusCoprobacter-0.010.6810.762
speciesCoprobacter_fastidiosus-0.010.6810.762
speciesClostridium_ramosum-0.0090.6840.763
speciesLactobacillus_oris-0.0090.6850.763
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0090.6940.771
speciesBacteroides_clarus0.0090.7110.788
speciesLeuconostoc_lactis0.0080.7180.793
speciesParabacteroides_sp_D130.0080.7190.793
genusMyoviridae_noname-0.0080.7280.799
speciesParvimonas_unclassified-0.0080.7280.799
genusParvimonas-0.0080.7330.803
speciesParabacteroides_sp_20_3-0.0070.7510.821
genusTunalikevirus0.0070.7730.843
speciesKlebsiella_sp_MS_92_30.0060.7810.849
speciesAlistipes_senegalensis-0.0060.7820.849
speciesLachnospiraceae_bacterium_5_1_57FAA-0.0060.7840.849
familyOxalobacteraceae-0.0060.8020.866
speciesLactobacillus_amylovorus0.0060.8040.866
genusOxalobacter-0.0050.8230.882
speciesOxalobacter_formigenes-0.0050.8230.882
speciesHaemophilus_parainfluenzae0.0050.8260.882
speciesStreptococcus_phage_Sfi210.0050.8280.882
genusCoprobacillus-0.0050.830.882
speciesEnterobacteria_phage_HK5440.0050.830.882
genusAggregatibacter0.0050.8350.886
genusHaemophilus0.0050.8390.888
speciesCollinsella_intestinalis-0.0040.8470.894
speciesLactobacillus_vaginalis-0.0040.860.905
speciesClostridium_sp_KLE_1755-0.0040.8610.905
speciesEubacterium_dolichum0.0040.8720.915
orderPasteurellales0.0040.8770.916
familyPasteurellaceae0.0040.8770.916
speciesBacteroides_sp_1_1_60.0030.8850.922
speciesEscherichia_unclassified-0.0030.8870.922
speciesClostridium_clostridioforme0.0030.890.923
speciesVeillonella_dispar-0.0030.8930.924
speciesMegasphaera_micronuciformis0.0030.9090.936
speciesClostridium_sp_L2_50-0.0030.910.936
speciesEubacterium_eligens0.0030.910.936
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0020.9190.943
speciesBacteroides_vulgatus-0.0020.9250.947
speciesKlebsiella_oxytoca0.0020.9320.952
speciesWeissella_cibaria-0.0020.9340.952
familyClostridiales_Family_XI_Incertae_Sedis0.0020.9430.955
genusClostridiaceae_noname0.0020.9430.955
speciesClostridiaceae_bacterium_JC1180.0020.9430.955
speciesDesulfovibrio_desulfuricans-0.0020.9450.955
speciesDialister_succinatiphilus0.0010.960.966
speciesLactobacillus_salivarius0.0010.9610.966
speciesBacteroides_barnesiae-0.0010.9620.966
speciesBacteroides_sp_4_3_47FAA-0.0010.9820.984
speciesAlistipes_sp_HGB50.00.9850.985
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
ObesityDenmark1691230.1046319597360.07572534104960.0019113168758111513.78481
Type II diabetesSweden53920.05730295125940.04864104987620.194816754921675722.8818
Ulcerative colitisSpain78660.09782443568770.09447113790530.2447832881421210539.932
Type II diabetesChina1831850.1309864497680.1394126857670.2739713330671546751.1154
Liver cirrhosisChina1201140.1358411827460.1177571342370.2809204419922065669.3876
Colorectal cancerAustria64350.06936992335040.04937818280650.283598685251158239.1866
Type II diabetesDenmark752770.09992816192010.0930969011880.3731942171291760457.7048
Rheumatoid arthritisChina127980.09907514271350.1066039681290.4602653585241656655.2439
Crohns diseaseSpain17660.06632580967370.09447113790530.5687924543892446081.33
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382