MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:06:38 PST
Job id & description: 2392, purine12
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0006_GL01754113328584CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC31-1_GL01632433336985CompleteK05810COG1496unknownunknown100.0100.0100.0
866771.HMPREF9296_02033328351CompleteK05810COG1496BacteroidetesPrevotella100.0100.0100.0
MH0152_GL00484483330744CompleteK05810COG1496unknownunknown100.0100.0100.0
457391.HMPREF0105_45203344134CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
MH0004_GL00006273328473CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
MH0053_GL00368403345238CompleteK00772COG0005unknownunknown100.0100.0100.0
O2.UC41-2_GL00397643337223CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD15-3_GL01320953354148CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0107_GL00170903346017CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0126_GL00145963330224CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0244_GL00338993332128CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0421_GL00421383335333Lack 5'-endK00772COG0005unknownunknown100.0100.0100.0
T2D-146A_GL00283853341956Lack 5'-endK00772COG0005FirmicutesPhascolarctobacterium100.0100.0100.0
MH0005_GL00190013344495CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0011_GL00160903344660CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0042_GL00038013345123CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0212_GL01672393347861CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0382_GL00109923334483CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0439_GL01695113352018CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0452_GL00469543352306CompleteK00772COG0005unknownunknown100.0100.0100.0
O2.UC1-1_GL00772543336426CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC12-4_GL00547513339477CompleteK05810COG1496Bacteroidetesunknown100.0100.0100.0
679189.HMPREF9019_19923344322CompleteK05810COG1496BacteroidetesPrevotella100.0100.0100.0
DOM012_GL00140753340724CompleteK05810COG1496FirmicutesAcidaminococcus100.0100.0100.0
MH0084_GL00062103345595CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0259_GL00968583348528CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0364_GL01771423350234CompleteK05810COG1496unknownunknown100.0100.0100.0
763840445-stool2_revised3327565CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0212_GL01488583347858CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0406_GL00035953351207CompleteK00772COG0005unknownunknown100.0100.0100.0
V1.UC4-0_GL01214833339977CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0106_GL01194733329972CompleteK05810COG1496FirmicutesAcidaminococcus100.0100.0100.0
MH0271_GL00926633348772CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0025_GL00709953344948CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0026_GL00172183328932CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0083_GL00791593329549CompleteK00772COG0005FirmicutesAcidaminococcus100.0100.0100.0
MH0157_GL00912773346909CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0382_GL00699153350706CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC44-1_GL01336583337274CompleteK05810COG1496FirmicutesMegasphaera100.0100.0100.0
SZEY-20A_GL00326453341540CompleteK05810COG1496FirmicutesMegasphaera100.0100.0100.0
V1.CD22-0_GL02366633338065CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
MH0012_GL01205173328744CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0284_GL01005713349018CompleteK05810COG1496FirmicutesAcidaminococcus100.0100.0100.0
MH0011_GL00030243328661CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0053_GL00612203329224CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0109_GL00136093330013CompleteK03783COG0005unknownunknown100.0100.0100.0
158742018-stool1_revised3342986CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
764143897-stool1_revised3327671CompleteK03783COG0005unknownunknown100.0100.0100.0
DLF010_GL00061743340446CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0006_GL01605283328576CompleteK03783COG0005BacteroidetesAlistipes100.0100.0100.0
MH0123_GL00593743346224CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0192_GL01722443331350CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0196_GL01742183331419CompleteK03783COG0005BacteroidetesAlistipes100.0100.0100.0
MH0220_GL01548043331769CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0272_GL00423233332611CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC31-1_GL01533163353229CompleteK05810COG1496unknownunknown100.0100.0100.0
T2D-22A_GL01199583342105CompleteK03783COG0005BacteroidetesAlistipes100.0100.0100.0
V1.CD34-0_GL00043033338255CompleteK05810COG1496unknownunknown100.0100.0100.0
457424.BFAG_044833328180CompleteK03783COG0005BacteroidetesBacteroides100.0100.0100.0
604812005-stool2_revised3343495CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0012_GL00549123328713CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0152_GL00225053346838CompleteK05810COG1496unknownunknown100.0100.0100.0
765094712-stool1_revised3327856CompleteK03783COG0005BacteroidetesBacteroides100.0100.0100.0
MH0003_GL00139193328433CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0006_GL01840393328589CompleteK03783COG0005BacteroidetesAlistipes100.0100.0100.0
MH0066_GL00672393345418CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0095_GL00603433345775CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0124_GL01391253330212CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0131_GL01253003330357CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0272_GL00970833348795CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0316_GL00134793333188CompleteK03783COG0005BacteroidetesAlistipes100.0100.0100.0
MH0363_GL00733263350228CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0436_GL01559343351932CompleteK05810COG1496unknownunknown100.0100.0100.0
N038A_GL01086983341357CompleteK03783COG0005BacteroidetesAlistipes100.0100.0100.0
MH0003_GL00732323344451Lack 5'-endK03783COG0005BacteroidetesAlistipes100.0100.0100.0
MH0011_GL00187483344663Lack 3'-endK05810COG1496unknownunknown100.0100.0100.0
MH0055_GL00294163345291CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0308_GL00049133349258CompleteK05810COG1496unknownunknown100.0100.0100.0
210007.SMU_12293327987CompleteK03783COG0005FirmicutesStreptococcus100.0100.0100.0
MH0113_GL00149703346093CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0128_GL00379053346356CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0343_GL00444223349838CompleteK05810COG1496unknownunknown100.0100.0100.0
1000570.HMPREF9966_11063328101CompleteK03783COG0005FirmicutesStreptococcus100.0100.0100.0
435842.HMPREF0848_005983328139CompleteK03783COG0005FirmicutesStreptococcus100.0100.0100.0
MH0147_GL01157853346754CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0434_GL00893843351895CompleteK03783COG0005unknownunknown100.0100.0100.0
889206.HMPREF9425_09133328375CompleteK03783COG0005FirmicutesStreptococcus100.0100.0100.0
864570.HMPREF9189_09693328345CompleteK03783COG0005FirmicutesStreptococcus100.0100.0100.0
871237.SIN_15053328361CompleteK03783COG0005FirmicutesStreptococcus100.0100.0100.0
MH0074_GL00485003329451CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0107_GL00801103329988CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0199_GL01549433347658CompleteK05810COG1496unknownunknown100.0100.0100.0
888833.HMPREF9961_17053328374CompleteK03783COG0005FirmicutesStreptococcus100.0100.0100.0
O2.UC16-1_GL00615703336556CompleteK05810COG1496unknownunknown100.0100.0100.0
467705.SGO_12633328041CompleteK03783COG0005FirmicutesStreptococcus100.0100.0100.0
MH0021_GL00614323344923CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0415_GL00705593351408Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
V1.UC33-0_GL00803523339808Lack 5'-endK03783COG0005FirmicutesStreptococcus100.0100.0100.0
V1.UC31-4_GL01567623339792Lack 5'-endK03783COG0005FirmicutesStreptococcus100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyBacteroidaceae0.6738.83e-2472.08e-244
genusBacteroides0.6738.83e-2472.08e-244
classBacteroidia0.5257.06e-1336.67e-131
orderBacteroidales0.5257.06e-1336.67e-131
phylumBacteroidetes0.5257.07e-1336.67e-131
genusParabacteroides0.4763.34e-1062.63e-104
speciesBacteroides_vulgatus0.4657.31e-1014.93e-99
familyPorphyromonadaceae0.4532.75e-951.62e-93
phylumFirmicutes-0.425.65e-812.96e-79
speciesBacteroides_ovatus0.3934.19e-701.98e-68
classClostridia-0.3773.48e-641.37e-62
orderClostridiales-0.3773.48e-641.37e-62
genusDorea-0.3572.39e-578.68e-56
speciesRuminococcus_obeum-0.3512.83e-559.54e-54
speciesBacteroides_thetaiotaomicron0.3436.83e-532.15e-51
orderCoriobacteriales-0.3361.05e-502.92e-49
familyCoriobacteriaceae-0.3361.05e-502.92e-49
speciesBacteroides_uniformis0.3321.99e-495.22e-48
speciesCoprococcus_catus-0.3262.02e-475.02e-46
familyRikenellaceae0.3252.86e-476.43e-46
genusAlistipes0.3252.86e-476.43e-46
speciesDorea_longicatena-0.321.06e-452.27e-44
familyLachnospiraceae-0.3051.28e-412.63e-40
speciesDorea_formicigenerans-0.3035.12e-411.01e-39
classErysipelotrichia-0.3029.53e-411.67e-39
orderErysipelotrichales-0.3029.53e-411.67e-39
familyErysipelotrichaceae-0.3029.53e-411.67e-39
phylumActinobacteria-0.3011.56e-402.54e-39
classActinobacteria-0.3011.56e-402.54e-39
genusCoprococcus-0.2988.98e-401.41e-38
orderLactobacillales-0.2972.45e-393.73e-38
classBacilli-0.2959.35e-391.38e-37
speciesCollinsella_aerofaciens-0.2893.25e-374.65e-36
familyRuminococcaceae-0.2883.87e-375.37e-36
genusCollinsella-0.2773.23e-344.36e-33
speciesEubacterium_hallii-0.2741.16e-331.52e-32
familyActinomycetaceae-0.2741.35e-331.72e-32
genusErysipelotrichaceae_noname-0.2741.89e-332.35e-32
genusActinomyces-0.2724.91e-335.94e-32
speciesBacteroides_xylanisolvens0.271.56e-321.84e-31
familyStreptococcaceae-0.2678.08e-329.3e-31
speciesCoprococcus_comes-0.2586.35e-307.14e-29
genusStreptococcus-0.2589.47e-301.04e-28
classBetaproteobacteria0.2531.23e-281.32e-27
genusFlavonifractor0.2521.96e-282.01e-27
speciesFlavonifractor_plautii0.2521.96e-282.01e-27
orderBurkholderiales0.2522.06e-282.07e-27
orderActinomycetales-0.2472.73e-272.68e-26
familyOscillospiraceae0.2457e-276.61e-26
genusOscillibacter0.2457e-276.61e-26
genusOlsenella-0.2441.11e-261.03e-25
speciesEubacterium_biforme-0.2431.7e-261.54e-25
speciesBacteroides_dorei0.2413.73e-263.32e-25
speciesStreptococcus_salivarius-0.2391.01e-258.83e-25
speciesOlsenella_unclassified-0.2372.27e-251.95e-24
speciesOdoribacter_splanchnicus0.2358.46e-257.13e-24
genusRuminococcus-0.2358.73e-257.23e-24
genusOdoribacter0.2331.61e-241.31e-23
speciesAlistipes_putredinis0.2323.15e-242.52e-23
speciesOscillibacter_unclassified0.2323.24e-242.55e-23
speciesBacteroides_fragilis0.2291.36e-231.05e-22
orderBifidobacteriales-0.2257.25e-235.43e-22
familyBifidobacteriaceae-0.2257.25e-235.43e-22
speciesMethanobrevibacter_smithii-0.2249.23e-236.81e-22
genusBifidobacterium-0.2231.74e-221.26e-21
classMethanobacteria-0.2214.52e-223.14e-21
orderMethanobacteriales-0.2214.52e-223.14e-21
familyMethanobacteriaceae-0.2214.52e-223.14e-21
speciesStreptococcus_parasanguinis-0.2181.22e-218.35e-21
familySutterellaceae0.2172.38e-211.6e-20
genusMethanobrevibacter-0.2162.91e-211.93e-20
phylumEuryarchaeota-0.2131.25e-208.19e-20
speciesAnaerostipes_hadrus-0.2112.64e-201.71e-19
speciesRuminococcus_sp_5_1_39BFAA-0.2097.64e-204.87e-19
genusSolobacterium-0.2053.32e-192.06e-18
speciesSolobacterium_moorei-0.2053.32e-192.06e-18
speciesBifidobacterium_adolescentis-0.2053.37e-192.07e-18
speciesBilophila_unclassified0.2037.66e-194.64e-18
genusBlautia-0.2021.09e-186.51e-18
genusBilophila0.2021.32e-187.79e-18
familyLactobacillaceae-0.2011.52e-188.86e-18
genusLactobacillus-0.22.8e-181.61e-17
speciesParabacteroides_distasonis0.1993.77e-182.14e-17
familyPrevotellaceae-0.1986.6e-183.71e-17
familyPeptostreptococcaceae-0.1951.5e-178.33e-17
speciesPrevotella_copri-0.1951.66e-179.11e-17
speciesStreptococcus_sanguinis-0.1942.56e-171.39e-16
genusAnaerostipes-0.1916.81e-173.65e-16
genusAdlercreutzia-0.191.15e-166.03e-16
speciesAdlercreutzia_equolifaciens-0.191.15e-166.03e-16
speciesClostridiales_bacterium_1_7_47FAA0.1891.42e-167.37e-16
familyEubacteriaceae-0.1891.74e-168.93e-16
genusPeptostreptococcaceae_noname-0.1891.86e-169.44e-16
genusEubacterium-0.1891.97e-169.89e-16
speciesClostridium_citroniae0.1882.4e-161.19e-15
speciesStreptococcus_thermophilus-0.1882.89e-161.42e-15
familyClostridiales_noname0.1856.29e-163.06e-15
speciesBacteroides_stercoris0.1857.74e-163.73e-15
familyBacillales_noname-0.1841.03e-154.86e-15
genusGemella-0.1841.03e-154.86e-15
speciesClostridium_bolteae0.1822.1e-159.81e-15
speciesParabacteroides_merdae0.183.71e-151.72e-14
classDeltaproteobacteria0.185.06e-152.27e-14
orderDesulfovibrionales0.185.06e-152.27e-14
familyDesulfovibrionaceae0.185.06e-152.27e-14
speciesEubacterium_ramulus-0.1796.31e-152.81e-14
genusPrevotella-0.1788.57e-153.78e-14
genusBurkholderiales_noname0.1781.04e-144.5e-14
speciesBurkholderiales_bacterium_1_1_470.1781.04e-144.5e-14
familyBurkholderiales_noname0.1771.12e-144.81e-14
genusCatenibacterium-0.1771.35e-145.69e-14
speciesCatenibacterium_mitsuokai-0.1771.35e-145.69e-14
orderBacillales-0.1761.99e-148.31e-14
speciesBilophila_wadsworthia0.1762.02e-148.36e-14
speciesLachnospiraceae_bacterium_5_1_63FAA-0.171.28e-135.25e-13
speciesClostridium_asparagiforme0.171.39e-135.65e-13
genusSubdoligranulum-0.171.4e-135.65e-13
genusParasutterella0.1692.17e-138.61e-13
speciesParasutterella_excrementihominis0.1692.17e-138.61e-13
speciesSubdoligranulum_unclassified-0.1682.36e-139.28e-13
familyEnterococcaceae-0.1648.73e-133.41e-12
genusEnterococcus-0.1621.87e-127.23e-12
genusLeuconostoc-0.1621.98e-127.6e-12
speciesAlistipes_shahii0.1612.55e-129.71e-12
familyMicrococcaceae-0.162.99e-121.13e-11
genusRothia-0.163.43e-121.28e-11
speciesRothia_mucilaginosa-0.1594.73e-121.76e-11
speciesRuminococcus_torques-0.1595.18e-121.91e-11
speciesBacteroides_caccae0.1579.77e-123.57e-11
speciesStreptococcus_anginosus-0.1561.08e-113.92e-11
speciesAlistipes_onderdonkii0.1561.19e-114.29e-11
speciesStreptococcus_australis-0.1523.49e-111.25e-10
speciesEubacterium_siraeum-0.1523.98e-111.41e-10
speciesClostridium_symbiosum0.1515.4e-111.9e-10
speciesBifidobacterium_longum-0.157.13e-112.49e-10
speciesLactobacillus_rhamnosus-0.1499.66e-113.35e-10
speciesStreptococcus_vestibularis-0.1481.24e-104.27e-10
speciesBacteroides_nordii0.1481.34e-104.58e-10
genusMethanosphaera-0.1481.45e-104.89e-10
speciesMethanosphaera_stadtmanae-0.1481.45e-104.89e-10
speciesAlistipes_finegoldii0.1462.16e-107.23e-10
familyLeuconostocaceae-0.1452.82e-109.37e-10
speciesRuminococcus_bromii-0.1444.5e-101.49e-09
speciesStreptococcus_gordonii-0.1426.23e-102.04e-09
speciesClostridium_bartlettii-0.1391.45e-094.72e-09
speciesMethanobrevibacter_unclassified-0.1391.49e-094.82e-09
speciesStreptococcus_mitis_oralis_pneumoniae-0.1391.64e-095.27e-09
speciesDialister_succinatiphilus-0.1363.84e-091.22e-08
phylumFusobacteria0.1337.26e-092.27e-08
classFusobacteriia0.1337.26e-092.27e-08
orderFusobacteriales0.1337.26e-092.27e-08
genusClostridiales_noname0.1329.21e-092.86e-08
speciesBifidobacterium_animalis-0.1321.1e-083.39e-08
familyFusobacteriaceae0.131.7e-085.21e-08
genusFusobacterium0.1292.13e-086.49e-08
speciesRuminococcus_callidus-0.1292.29e-086.93e-08
speciesBacteroides_cellulosilyticus0.1292.42e-087.28e-08
speciesParabacteroides_unclassified0.1282.54e-087.59e-08
speciesStreptococcus_mutans-0.1282.77e-088.22e-08
speciesClostridium_hathewayi0.1273.59e-081.06e-07
genusLachnospiraceae_noname-0.1264.78e-081.4e-07
genusClostridiaceae_noname0.1265.1e-081.48e-07
speciesClostridiaceae_bacterium_JC1180.1265.1e-081.48e-07
speciesCoprococcus_eutactus-0.1255.43e-081.56e-07
speciesAnaerotruncus_colihominis0.1256.11e-081.75e-07
speciesClostridium_sp_L2_50-0.1246.81e-081.94e-07
speciesErysipelotrichaceae_bacterium_21_3-0.1238.69e-082.46e-07
genusLactococcus-0.1239.13e-082.57e-07
speciesPropionibacterium_freudenreichii-0.1221.36e-073.8e-07
speciesEnterococcus_faecalis-0.1211.62e-074.5e-07
speciesCoprococcus_sp_ART55_1-0.121.9e-075.24e-07
phylumVerrucomicrobia-0.122.1e-075.6e-07
classVerrucomicrobiae-0.122.1e-075.6e-07
orderVerrucomicrobiales-0.122.1e-075.6e-07
familyVerrucomicrobiaceae-0.122.1e-075.6e-07
genusAkkermansia-0.122.1e-075.6e-07
speciesAkkermansia_muciniphila-0.122.1e-075.6e-07
speciesMitsuokella_multacida-0.1192.29e-076.07e-07
speciesButyrivibrio_crossotus-0.1192.52e-076.64e-07
speciesRuminococcus_gnavus0.1192.58e-076.77e-07
genusParaprevotella-0.1192.72e-077.09e-07
speciesRuminococcus_sp_JC304-0.1192.76e-077.16e-07
speciesLactococcus_phage_P680-0.1174.15e-071.07e-06
speciesParaprevotella_unclassified-0.1174.24e-071.09e-06
genusGordonibacter-0.1165.13e-071.3e-06
speciesGordonibacter_pamelaeae-0.1165.13e-071.3e-06
speciesEnterococcus_faecium-0.1165.47e-071.38e-06
genusButyrivibrio-0.1139.48e-072.38e-06
genusPropionibacterium-0.1139.71e-072.42e-06
speciesEubacterium_rectale-0.1092.27e-065.64e-06
speciesBifidobacterium_dentium-0.1092.47e-066.07e-06
speciesPeptostreptococcaceae_noname_unclassified-0.1092.47e-066.07e-06
speciesLactobacillus_casei_paracasei-0.1082.59e-066.33e-06
speciesClostridium_clostridioforme0.1064.13e-061e-05
speciesTuricibacter_sanguinis-0.1064.3e-061.04e-05
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speciesFusobacterium_varium0.0981.99e-054.49e-05
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speciesOscillibacter_sp_KLE_17280.0972.91e-056.45e-05
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speciesLachnospiraceae_bacterium_2_1_58FAA0.0810.0004610.000926
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speciesEggerthella_sp_1_3_56FAA-0.0750.001110.00209
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genusParvimonas-0.0740.001310.00243
speciesParvimonas_unclassified-0.0740.001310.00243
speciesClostridium_sp_ATCC_BAA_4420.0740.001430.00265
speciesEggerthella_lenta-0.0730.001490.00275
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speciesBifidobacterium_bifidum-0.0720.001940.00355
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speciesAnaerostipes_unclassified0.0710.002050.00372
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speciesCollinsella_intestinalis0.0660.004280.00754
speciesHaemophilus_parainfluenzae0.0660.004310.00756
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familyPasteurellaceae0.0660.004550.00792
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speciesCollinsella_unclassified0.0650.005230.00904
speciesLactobacillus_gasseri-0.0640.005610.00966
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speciesLactobacillus_fermentum-0.0630.006390.0108
speciesWeissella_cibaria-0.0630.006530.011
speciesBacteroides_intestinalis0.0620.007080.0119
speciesBacteroides_oleiciplenus0.0610.008710.0146
speciesBacteroides_sp_1_1_60.060.009820.0164
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speciesLactococcus_phage_jm2-0.0590.0110.0183
speciesLactobacillus_amylovorus-0.0580.01190.0197
familyBacteroidales_noname0.0580.01270.0208
genusBacteroidales_noname0.0580.01270.0208
speciesBacteroidales_bacterium_ph80.0580.01270.0208
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0560.01520.0248
speciesBacteroides_plebeius-0.0560.01540.0251
speciesBacteroides_finegoldii0.0550.01710.0277
speciesBacteroides_coprophilus-0.0550.01810.0293
genusHoldemania0.0550.01820.0293
speciesAlistipes_sp_HGB50.0540.01870.0299
speciesAcidaminococcus_unclassified0.0540.01870.0299
speciesParabacteroides_goldsteinii0.0540.01990.0317
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speciesPrevotella_bivia0.0510.02610.0409
speciesLactobacillus_reuteri-0.0510.02680.0419
genusButyricicoccus0.0510.02720.0422
speciesButyricicoccus_pullicaecorum0.0510.02720.0422
speciesLachnospiraceae_bacterium_1_4_56FAA0.0510.02770.0429
speciesLachnospiraceae_bacterium_5_1_57FAA0.050.03060.0472
speciesEscherichia_unclassified-0.050.03210.0494
speciesPrevotella_buccae0.0490.03240.0497
genusWeissella-0.0490.03490.0533
speciesClostridium_spiroforme-0.0490.0350.0533
genusSlackia-0.0480.03950.0599
speciesAlistipes_senegalensis-0.0470.0410.062
speciesBlautia_hydrogenotrophica-0.0470.04250.0641
genusDialister-0.0440.05780.0869
speciesAcidaminococcus_fermentans-0.0440.05810.0871
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speciesMegamonas_funiformis-0.0420.06810.101
familyViruses_noname-0.0410.07380.109
genusViruses_noname-0.0410.07380.109
genusProteus-0.0410.07810.115
genusEscherichia-0.040.08420.124
speciesBifidobacterium_breve-0.040.08520.125
speciesProteus_mirabilis-0.040.08560.125
genusBarnesiella0.040.08610.125
speciesBarnesiella_intestinihominis0.040.08610.125
speciesBacteroides_barnesiae-0.040.08750.127
speciesLactococcus_phage_phi7-0.0390.08790.127
speciesAcidaminococcus_intestini0.0390.0880.127
genusOxalobacter-0.0390.09140.131
speciesOxalobacter_formigenes-0.0390.09140.131
speciesStreptococcus_pasteurianus0.0390.09160.131
familyOxalobacteraceae-0.0390.0960.136
familyMyoviridae-0.0380.09610.136
familyClostridiaceae0.0380.09670.137
speciesWeissella_confusa-0.0380.1010.142
speciesEubacterium_limosum-0.0380.1020.143
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genusKlebsiella-0.0350.1290.179
speciesKlebsiella_unclassified-0.0350.1290.179
speciesEscherichia_coli-0.0350.130.179
speciesAlistipes_indistinctus0.0340.1370.188
speciesEubacterium_eligens-0.0340.1370.188
speciesMegamonas_rupellensis0.0340.140.192
speciesOdoribacter_laneus-0.0340.1410.192
speciesBacteroides_sp_3_1_190.0340.1420.193
orderViruses_noname-0.0340.1440.195
speciesCollinsella_tanakaei0.0330.1540.208
genusRoseburia0.0330.1550.209
speciesEnterobacteria_phage_HK5440.0330.1580.212
speciesBacteroides_salanitronis-0.0320.1610.216
genusPyramidobacter0.0320.1630.217
speciesPyramidobacter_piscolens0.0320.1630.217
genusCoprobacter0.0320.1640.217
speciesCoprobacter_fastidiosus0.0320.1640.217
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0320.1650.218
speciesSlackia_piriformis-0.0310.1780.235
speciesBifidobacterium_angulatum-0.030.1880.247
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.030.1890.248
genusSutterellaceae_unclassified0.030.1960.256
genusPseudoflavonifractor-0.030.2010.261
speciesPseudoflavonifractor_capillosus-0.030.2010.261
genusPantoea-0.0290.2110.273
speciesPantoea_unclassified-0.0290.2110.273
phylumSynergistetes0.0280.2240.287
classSynergistia0.0280.2240.287
orderSynergistales0.0280.2240.287
familySynergistaceae0.0280.2240.287
speciesVeillonella_dispar0.0280.2290.292
speciesHoldemania_sp_AP20.0280.230.293
speciesLactobacillus_acidophilus-0.0270.2440.31
speciesLactobacillus_salivarius-0.0260.2530.32
genusAcidaminococcus0.0260.2560.323
speciesRoseburia_inulinivorans0.0260.2590.326
genusDesulfovibrio-0.0250.2710.34
genusMyoviridae_noname-0.0250.2770.347
familyAcidaminococcaceae-0.0250.2780.347
speciesPorphyromonas_uenonis-0.0250.280.348
speciesRoseburia_unclassified-0.0250.280.348
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0240.2970.368
genusPorphyromonas-0.0240.3020.373
classNegativicutes-0.0240.3040.374
orderSelenomonadales-0.0240.3040.374
speciesDesulfovibrio_desulfuricans0.0240.3090.379
speciesEggerthella_unclassified0.0230.310.379
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0230.3160.384
speciesDialister_invisus0.0230.3160.384
speciesParabacteroides_sp_D13-0.0230.3240.393
genusSutterella0.0230.3260.395
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0220.3410.412
speciesClostridium_ramosum-0.0220.3450.415
speciesHoldemania_filiformis0.0220.3460.416
genusAnaerotruncus-0.0220.3520.422
orderAeromonadales-0.0220.3530.422
speciesMegasphaera_unclassified0.0210.3570.426
speciesLactobacillus_crispatus-0.020.380.452
familyPodoviridae0.020.3960.47
speciesRoseburia_intestinalis0.0190.4190.496
familyVeillonellaceae-0.0190.4210.497
speciesLactobacillus_sanfranciscensis-0.0190.4220.497
speciesEnterobacter_aerogenes-0.0180.4250.499
speciesLactobacillus_oris-0.0180.4290.502
speciesPorphyromonas_asaccharolytica-0.0180.4410.515
speciesHoldemania_unclassified0.0180.4490.523
speciesKlebsiella_pneumoniae-0.0170.450.523
speciesClostridium_perfringens-0.0170.4620.536
speciesKlebsiella_sp_MS_92_3-0.0170.4710.545
familySuccinivibrionaceae-0.0170.4740.547
speciesErysipelotrichaceae_bacterium_3_1_530.0160.4850.558
speciesAggregatibacter_segnis-0.0160.4930.566
genusCitrobacter-0.0160.4940.566
speciesHaemophilus_sputorum0.0160.50.571
speciesButyrivibrio_unclassified-0.0150.5090.58
speciesAlistipes_unclassified-0.0150.520.591
speciesOdoribacter_unclassified-0.0150.5240.595
speciesC2likevirus_unclassified-0.0140.5370.608
speciesBifidobacterium_pseudocatenulatum0.0140.5390.609
speciesLactobacillus_vaginalis-0.0140.5460.615
speciesCoriobacteriaceae_bacterium_phI0.0140.5470.615
speciesCitrobacter_freundii-0.0140.5510.618
genusSuccinatimonas-0.0130.5610.626
speciesSuccinatimonas_hippei-0.0130.5610.626
speciesFusobacterium_nucleatum0.0130.5620.626
genusC2likevirus-0.0130.5660.629
speciesStreptococcus_infantarius0.0130.5680.629
speciesBacteroides_fluxus-0.0130.5720.632
speciesMegasphaera_elsdenii-0.0130.5730.632
speciesParabacteroides_sp_20_30.0130.5820.64
genusEggerthella0.0130.5860.643
genusCoriobacteriaceae_noname0.0120.5970.654
genusTunalikevirus-0.0120.6020.658
speciesCitrobacter_unclassified-0.0120.6080.663
speciesSutterella_wadsworthensis0.0110.6270.682
genusMegasphaera0.0110.6360.69
speciesMegamonas_hypermegale-0.010.6670.722
speciesStreptococcus_lutetiensis0.0090.6950.751
speciesLactococcus_phage_936_sensu_lato0.0080.7190.773
genusActinobacillus0.0080.7210.773
speciesActinobacillus_unclassified0.0080.7210.773
speciesKlebsiella_phage_KP36-0.0080.7290.78
genusCampylobacter0.0080.7380.788
speciesCoprobacillus_sp_29_10.0070.7540.803
speciesHaemophilus_paraphrohaemolyticus0.0070.7580.806
speciesClostridium_sp_KLE_1755-0.0070.7690.816
familyCampylobacteraceae0.0060.8060.853
speciesMegasphaera_micronuciformis0.0060.8080.853
genusLambdalikevirus-0.0050.8170.861
speciesCampylobacter_concisus0.0050.820.862
speciesLactococcus_phage_bIL670.0050.8390.88
speciesBacteroides_faecis-0.0040.8530.892
genusRuminococcaceae_noname0.0040.8570.892
speciesRuminococcaceae_bacterium_D160.0040.8570.892
genusStaphylococcus-0.0040.8580.892
genusMorganella-0.0030.8950.926
speciesMorganella_morganii-0.0030.8950.926
genusAggregatibacter0.0030.9070.937
speciesCoprobacillus_unclassified-0.0020.9210.949
speciesCoprobacillus_sp_D60.0020.9270.953
genusCoprobacillus-0.0020.9330.957
speciesVeillonella_unclassified0.0010.9490.972
speciesMegamonas_unclassified-0.0010.9550.976
genusMegamonas-0.0010.970.989
familyStaphylococcaceae0.0010.9760.989
speciesVeillonella_atypica0.0010.9760.989
genusVeillonella0.0010.9790.989
classEpsilonproteobacteria0.0010.9810.989
orderCampylobacterales0.0010.9810.989
speciesBlautia_producta0.00.9850.99
speciesStreptococcus_phage_Sfi210.00.9860.99
speciesVeillonella_parvula0.00.9910.993
speciesBacteroides_eggerthii0.00.9970.997
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.2001502007470.1020690606589.67722331085e-0519056.33416
Type II diabetesSweden53920.05890478564270.06159315057260.130183558225466815.8077
Rheumatoid arthritisChina127980.1055497371580.1048735768720.168622327872776925.9079
ObesityDenmark1691230.1096647815020.1041781676010.2410256366311256841.3272
Liver cirrhosisChina1201140.1416822251860.1462291383630.2871975671352072969.6328
Type II diabetesDenmark752770.1012063229710.1078153728110.3974697541191812759.4192
Ulcerative colitisSpain78660.102312952990.1020690606580.7962215258142565084.6144
Colorectal cancerAustria64350.05025652938350.0515136249310.9329201718422798394.6779
Type II diabetesChina1831850.1163554837540.1203176371330.9987500874473023099.9042
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382