MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:07:10 PST
Job id & description: 2393, purine13
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
O2.UC2-1_GL01470473369625CompleteK05810COG1496unknownunknown100.0100.0100.0
763982056-stool2_revised3360240CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0055_GL00124843361883CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
MH0079_GL00048293362113CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
MH0265_GL00573753365272CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0097_GL00389043362369CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0156_GL00476383363438CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0329_GL01860603366262CompleteK05810COG1496unknownunknown100.0100.0100.0
T2D-63A_GL00402343358854CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0052_GL00487493361828CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
MH0137_GL00626613363061CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0369_GL00891323366966Lack 3'-endK00772COG0005unknownunknown100.0100.0100.0
MH0407_GL01514773367952CompleteK05810COG1496Bacteroidetesunknown100.0100.0100.0
MH0434_GL00073103368555CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0005_GL00000283361117CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0065_GL00415183361980CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0267_GL01595993381927CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0281_GL01142693365633CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0381_GL01135533383866CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0435_GL01055413385069CompleteK00772COG0005Firmicutesunknown100.0100.0100.0
V1.FI19_GL00411243388550CompleteK00772COG0005FirmicutesDialister100.0100.0100.0
V1.UC55-0_GL02228053389641CompleteK03784COG0813unknownunknown100.0100.0100.0
706434.HMPREF9429_013623377640CompleteK00772COG0005FirmicutesMegasphaera100.0100.0100.0
MH0230_GL01295983381348CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0308_GL00944823365891CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC48-0_GL00851753370310Lack 3'-endK05810COG1496unknownunknown100.0100.0100.0
SZEY-20A_GL00479213390979CompleteK00772COG0005FirmicutesPhascolarctobacterium100.0100.0100.0
T2D-163A_GL00645693391508CompleteK00772COG0005FirmicutesPhascolarctobacterium100.0100.0100.0
T2D-63A_GL00180033375567CompleteK00772COG0005unknownunknown100.0100.0100.0
159166850-stool1_revised3392613CompleteK03784COG0813unknownunknown100.0100.0100.0
DLF005_GL00305413373463CompleteK03784COG0813unknownunknown100.0100.0100.0
DLF007_GL00225743389818CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0012_GL02043753394454CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0032_GL00014283394698CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0130_GL00411623379591CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0167_GL00641243380188CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0339_GL00659023382945CompleteK00772COG0005unknownunknown100.0100.0100.0
N027A_GL00166453390769CompleteK00772COG0005unknownunknown100.0100.0100.0
O2.UC23-2_GL00265163386126CompleteK00772COG0005unknownunknown100.0100.0100.0
T2D-102A_GL00197893391134CompleteK00772COG0005unknownunknown100.0100.0100.0
T2D-156A_GL00225053391487CompleteK00772COG0005unknownunknown100.0100.0100.0
158944319-stool2_revised3392607Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
DLM013_GL00755073389965CompleteK00772COG0005unknownunknown100.0100.0100.0
ED9A_GL00264933374327CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
MH0012_GL00124423377996CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0052_GL00539113378476CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0447_GL00310273385308CompleteK00772COG0005unknownunknown100.0100.0100.0
HT25A_GL00619723359138CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0012_GL00342533394369CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0113_GL00101943395862CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0126_GL00992173396105CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0403_GL00018033384325CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0406_GL00236763367888CompleteK05810COG1496unknownunknown100.0100.0100.0
NLM027_GL00636553374009CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
675950834-stool1_revised3393065CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0038_GL00138563361686CompleteK00777NOG09378Bacteroidetesunknown100.0100.0100.0
MH0357_GL00326393383240CompleteK00772COG0005unknownunknown100.0100.0100.0
N009A_GL00928263390715CompleteK00772COG0005unknownunknown100.0100.0100.0
T2D-2A_GL00673013358613Lack 5'-endK03783COG0005BacteroidetesPrevotella100.0100.0100.0
160400887-stool1_revised3359836CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0322_GL00046343382674CompleteK00772COG0005unknownunknown100.0100.0100.0
V1.UC57-0_GL01776113356675CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC58-4_GL01212263356706Lack 3'-endK03783COG0005unknownunknown100.0100.0100.0
ED16A_GL01139853392109CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0002_GL00732433377741CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0043_GL00536723361745CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0234_GL00918993364737CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0251_GL01652653365015CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0262_GL00808313365214CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0336_GL01196163366374CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0391_GL00688903384136CompleteK05810COG1496unknownunknown100.0100.0100.0
N052A_GL00196273374494CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD19-0_GL01369483370881CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.FI33_GL00925983388723CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0060_GL00360563378576CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0439_GL02127343368694CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.FI06_GL00833993355092CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI25_GL01285533372180CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC61-0_GL00477963356766CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0021_GL00068483361522CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0028_GL00670893361599CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0101_GL00909203395670CompleteK00777COG2820Firmicutesunknown100.0100.0100.0
MH0369_GL00820353366964CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0456_GL01401743369027CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI11_GL00148993355180CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0230_GL00902313364670CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0266_GL00097783365288CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0130_GL00005393362926CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0275_GL00646143365474CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0452_GL01236173368955CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-11A_GL01532123375002CompleteK05810COG1496unknownunknown100.0100.0100.0
BGI002A_GL00306173357588CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0077_GL00382953362094CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0108_GL01074973379285CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0115_GL00536703395896CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0150_GL01022193363361CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI20_GL00930473355489CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0382_GL00179503367321CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0302_GL00296033382379Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
V1.UC17-2_GL00803433372584CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesBacteroides_plebeius0.4277.37e-843.48e-81
speciesBacteroides_massiliensis0.3928.28e-701.95e-67
familySutterellaceae0.2462.91e-274.58e-25
familyPrevotellaceae0.2356.74e-257.95e-23
orderBurkholderiales0.2332.21e-242.09e-22
genusOdoribacter0.2313.75e-242.95e-22
classBetaproteobacteria0.2299.25e-246.24e-22
classDeltaproteobacteria0.2281.79e-238.45e-22
orderDesulfovibrionales0.2281.79e-238.45e-22
familyDesulfovibrionaceae0.2281.79e-238.45e-22
classNegativicutes0.2172.15e-218.46e-20
orderSelenomonadales0.2172.15e-218.46e-20
speciesOdoribacter_splanchnicus0.2163.9e-211.42e-19
familyRikenellaceae0.2131.32e-204.15e-19
genusAlistipes0.2131.32e-204.15e-19
genusBilophila0.2095.58e-201.65e-18
speciesBilophila_unclassified0.2071.55e-194.3e-18
familyVeillonellaceae0.1993.57e-189.36e-17
speciesAlistipes_putredinis0.1961.22e-173.03e-16
genusPrevotella0.1951.98e-174.67e-16
speciesAlistipes_shahii0.1933.78e-178.5e-16
speciesPrevotella_copri0.1925.74e-171.23e-15
speciesAlistipes_indistinctus0.1891.94e-163.98e-15
speciesBacteroides_stercoris0.1882.82e-165.55e-15
speciesBacteroides_coprocola0.1856.21e-161.17e-14
speciesBilophila_wadsworthia0.1831.33e-152.41e-14
speciesAlistipes_senegalensis0.1822.45e-154.28e-14
classBacteroidia0.1813.67e-155.79e-14
orderBacteroidales0.1813.67e-155.79e-14
phylumBacteroidetes0.1813.68e-155.79e-14
speciesBacteroides_finegoldii0.1795.36e-158.16e-14
speciesRuminococcus_callidus0.1771.07e-141.58e-13
familyOscillospiraceae0.1735.43e-147.54e-13
genusOscillibacter0.1735.43e-147.54e-13
speciesParaprevotella_xylaniphila0.1726.73e-149.05e-13
speciesClostridium_ramosum-0.1726.9e-149.05e-13
speciesOscillibacter_unclassified0.1718.64e-141.1e-12
speciesAlistipes_finegoldii0.1682.52e-133.13e-12
speciesCoprobacillus_unclassified-0.1621.76e-122.13e-11
speciesBacteroides_fragilis-0.1594.4e-125.19e-11
genusParaprevotella0.1586.22e-127.06e-11
speciesParaprevotella_unclassified0.1586.28e-127.06e-11
speciesMegamonas_funiformis0.1561.17e-111.25e-10
genusCoprobacter0.1561.19e-111.25e-10
speciesCoprobacter_fastidiosus0.1561.19e-111.25e-10
speciesStreptococcus_sanguinis-0.1561.24e-111.27e-10
orderActinomycetales-0.1561.3e-111.31e-10
genusDesulfovibrio0.1532.9e-112.85e-10
genusBarnesiella0.1523.67e-113.46e-10
speciesBarnesiella_intestinihominis0.1523.67e-113.46e-10
genusActinomyces-0.1515.5e-115.09e-10
familyBacteroidales_noname0.156.15e-115.38e-10
genusBacteroidales_noname0.156.15e-115.38e-10
speciesBacteroidales_bacterium_ph80.156.15e-115.38e-10
familyActinomycetaceae-0.156.71e-115.76e-10
genusCoprobacillus-0.1471.55e-101.31e-09
speciesBacteroides_faecis0.1452.85e-102.36e-09
speciesStreptococcus_mitis_oralis_pneumoniae-0.1411e-098.14e-09
familyBacillales_noname-0.141.17e-099.2e-09
genusGemella-0.141.17e-099.2e-09
speciesParabacteroides_merdae0.1391.39e-091.08e-08
speciesParaprevotella_clara0.1391.46e-091.11e-08
speciesSutterella_wadsworthensis0.1391.59e-091.19e-08
genusSutterella0.1391.68e-091.24e-08
speciesMegamonas_hypermegale0.1382.13e-091.55e-08
speciesRoseburia_inulinivorans0.1363.25e-092.32e-08
genusAnaerostipes-0.1364.03e-092.84e-08
orderBacillales-0.1345.26e-093.65e-08
genusPropionibacterium-0.1345.56e-093.8e-08
speciesRoseburia_hominis0.1329.03e-096.08e-08
genusEggerthella-0.1329.15e-096.08e-08
speciesParabacteroides_goldsteinii0.1311.39e-089.11e-08
genusBlautia-0.131.62e-081.05e-07
speciesMegamonas_rupellensis0.131.64e-081.05e-07
speciesStreptococcus_mutans-0.131.67e-081.05e-07
speciesEggerthella_unclassified-0.1291.94e-081.2e-07
speciesLactobacillus_rhamnosus-0.1273.82e-082.34e-07
speciesAnaerostipes_unclassified-0.1256.6e-083.99e-07
familyPorphyromonadaceae0.1247.48e-084.47e-07
speciesAlistipes_sp_AP110.1247.58e-084.47e-07
speciesAlistipes_onderdonkii0.1247.98e-084.65e-07
speciesParabacteroides_distasonis0.1248.26e-084.75e-07
speciesBacteroides_salyersiae0.1211.55e-078.81e-07
speciesBacteroides_eggerthii0.1211.57e-078.82e-07
speciesLactobacillus_fermentum-0.1211.71e-079.5e-07
speciesMegamonas_unclassified0.121.94e-071.06e-06
speciesAnaerotruncus_colihominis0.1192.35e-071.27e-06
genusMegamonas0.1192.42e-071.29e-06
speciesRuminococcus_gnavus-0.1192.43e-071.29e-06
speciesBacteroides_caccae0.1183.21e-071.68e-06
speciesBifidobacterium_dentium-0.1183.32e-071.72e-06
speciesEubacterium_eligens0.1173.9e-072e-06
speciesStreptococcus_gordonii-0.1164.49e-072.28e-06
classBacilli-0.1164.55e-072.28e-06
classClostridia-0.1164.91e-072.41e-06
orderClostridiales-0.1164.91e-072.41e-06
genusDialister0.1155.85e-072.85e-06
speciesBacteroides_clarus0.1156.23e-072.99e-06
familyPropionibacteriaceae-0.1156.27e-072.99e-06
familyOxalobacteraceae0.1156.41e-073.03e-06
orderLactobacillales-0.1131.03e-064.77e-06
genusOxalobacter0.1131.04e-064.77e-06
speciesOxalobacter_formigenes0.1131.04e-064.77e-06
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.1121.3e-065.9e-06
genusAnaerotruncus0.1092.17e-069.75e-06
speciesBlautia_producta-0.1092.33e-061.04e-05
speciesStreptococcus_parasanguinis-0.1082.64e-061.16e-05
genusStreptococcus-0.1083.13e-061.37e-05
speciesCollinsella_tanakaei0.1073.25e-061.41e-05
genusSutterellaceae_unclassified0.1064.07e-061.75e-05
speciesDesulfovibrio_desulfuricans0.1064.58e-061.95e-05
speciesLachnospiraceae_bacterium_7_1_58FAA0.1055.28e-062.23e-05
speciesParabacteroides_johnsonii0.1046.61e-062.76e-05
genusRothia-0.1038.11e-063.36e-05
familyEnterococcaceae-0.1038.5e-063.49e-05
familyStreptococcaceae-0.1038.86e-063.58e-05
familyMicrococcaceae-0.1038.87e-063.58e-05
speciesLactobacillus_oris-0.1029.57e-063.83e-05
speciesDesulfovibrio_piger0.1021.08e-054.28e-05
genusRoseburia0.1011.1e-054.33e-05
genusButyricimonas0.1011.19e-054.6e-05
speciesButyricimonas_synergistica0.1011.19e-054.6e-05
genusEnterococcus-0.11.44e-055.53e-05
speciesRothia_mucilaginosa-0.0991.8e-056.85e-05
speciesRuminococcus_sp_JC304-0.0991.91e-057.21e-05
genusAcidaminococcaceae_unclassified0.0982e-057.49e-05
speciesEnterococcus_faecium-0.0972.46e-059.14e-05
speciesBacteroides_nordii0.0972.55e-059.4e-05
speciesPrevotella_stercorea0.0963.15e-050.000115
speciesDialister_succinatiphilus0.0953.85e-050.00014
genusFaecalibacterium0.0944.35e-050.000156
speciesFaecalibacterium_prausnitzii0.0944.35e-050.000156
genusRuminococcaceae_noname0.0944.42e-050.000156
speciesRuminococcaceae_bacterium_D160.0944.42e-050.000156
phylumFirmicutes-0.0944.83e-050.000169
speciesStreptococcus_vestibularis-0.0935.42e-050.000188
speciesBacteroides_sp_3_1_190.0935.59e-050.000193
speciesEubacterium_ventriosum0.0926.27e-050.000214
familyBacteroidaceae0.0918.33e-050.000281
genusBacteroides0.0918.33e-050.000281
genusPyramidobacter0.0918.45e-050.000281
speciesPyramidobacter_piscolens0.0918.45e-050.000281
speciesFusobacterium_ulcerans-0.0918.63e-050.000285
familyLachnospiraceae-0.090.0001030.000338
familyLactobacillaceae-0.0890.0001090.000355
speciesLactobacillus_casei_paracasei-0.0880.0001280.000411
speciesEggerthella_lenta-0.0880.0001280.000411
speciesLactobacillus_gasseri-0.0880.000150.000478
speciesStreptococcus_anginosus-0.0870.0001550.000491
genusLactobacillus-0.0870.0001590.0005
genusSolobacterium-0.0860.0002030.00063
speciesSolobacterium_moorei-0.0860.0002030.00063
speciesFusobacterium_varium-0.0840.0002690.00083
genusParasutterella0.0830.0003130.000953
speciesParasutterella_excrementihominis0.0830.0003130.000953
speciesEubacterium_biforme0.0820.000360.00109
speciesLactobacillus_vaginalis-0.0820.0004110.00124
speciesAnaerostipes_hadrus-0.0810.0004690.0014
speciesLachnospiraceae_bacterium_1_1_57FAA0.0810.0004710.0014
speciesPropionibacterium_freudenreichii-0.080.000530.00156
genusParabacteroides0.0790.0005950.00174
speciesClostridium_citroniae0.0790.0006280.00183
genusCollinsella0.0780.0007230.00209
speciesCollinsella_aerofaciens0.0780.0007430.00214
familySuccinivibrionaceae0.0780.0007470.00214
phylumSynergistetes0.0780.0007670.00214
classSynergistia0.0780.0007670.00214
orderSynergistales0.0780.0007670.00214
familySynergistaceae0.0780.0007670.00214
phylumProteobacteria0.0770.0008170.00227
genusSuccinatimonas0.0770.0008370.0023
speciesSuccinatimonas_hippei0.0770.0008370.0023
speciesBacteroides_intestinalis0.0770.0008450.00231
speciesStreptococcus_salivarius-0.0770.0008530.00231
speciesHoldemania_filiformis0.0770.0008990.00242
speciesErysipelotrichaceae_bacterium_21_3-0.0760.0009570.00257
speciesAnaerotruncus_unclassified0.0750.001110.00295
genusFlavonifractor0.0750.001120.00295
speciesFlavonifractor_plautii0.0750.001120.00295
genusHoldemania0.0750.001160.00303
phylumActinobacteria-0.0750.001170.00303
classActinobacteria-0.0750.001170.00303
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0750.001210.00312
orderPseudomonadales-0.0740.00140.00359
speciesMegasphaera_unclassified0.0730.001490.0038
speciesSlackia_piriformis0.0730.001610.00409
genusPantoea-0.0730.001630.00409
speciesPantoea_unclassified-0.0730.001630.00409
orderBifidobacteriales-0.0720.001920.00477
familyBifidobacteriaceae-0.0720.001920.00477
speciesLactobacillus_amylovorus-0.0720.001960.00484
speciesBacteroides_xylanisolvens0.0710.002140.00526
genusBifidobacterium-0.0710.002220.00543
genusAcidaminococcus0.0710.002250.00547
speciesClostridium_asparagiforme0.070.002350.00569
speciesLachnospiraceae_bacterium_6_1_63FAA-0.070.002570.00619
speciesLactobacillus_salivarius-0.0690.002710.00649
speciesDialister_invisus0.0690.002910.00694
speciesAlistipes_unclassified-0.0690.003010.00714
speciesEubacterium_sp_3_1_31-0.0680.003480.00821
genusEnterobacter0.0670.003730.00876
familyAcidaminococcaceae0.0650.004640.0108
orderAeromonadales0.0650.00490.0114
speciesRuminococcus_sp_5_1_39BFAA-0.0650.005240.0121
speciesClostridium_nexile-0.0640.005280.0122
speciesLachnospiraceae_bacterium_2_1_58FAA-0.0640.005410.0124
genusPeptostreptococcus-0.0640.005450.0124
speciesRuminococcus_lactaris0.0640.005470.0124
speciesCampylobacter_concisus-0.0640.005950.0134
speciesFusobacterium_nucleatum-0.0630.006090.0137
speciesFusobacterium_mortiferum0.0630.00630.0141
speciesStreptococcus_thermophilus-0.0630.006340.0141
genusMitsuokella0.0620.006950.0154
speciesEnterobacter_cloacae0.0620.007360.0162
genusCoprococcus0.0620.007690.0168
speciesLactobacillus_ruminis0.0620.00770.0168
genusLachnospiraceae_noname-0.0610.007950.0173
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speciesLachnospiraceae_bacterium_3_1_46FAA0.060.009370.0202
speciesMitsuokella_multacida0.060.009470.0203
speciesBacteroides_coprophilus0.0580.01170.025
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speciesBifidobacterium_animalis-0.0580.01220.0258
speciesHoldemania_unclassified0.0580.01280.027
speciesEggerthella_sp_1_3_56FAA-0.0570.01330.0279
speciesStreptococcus_australis-0.0570.01390.029
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speciesOscillibacter_sp_KLE_17450.0560.01610.0333
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speciesMegasphaera_micronuciformis-0.0550.01840.0376
speciesCoprococcus_comes0.0540.01890.0385
speciesTuricibacter_sanguinis-0.0540.01950.0395
genusPorphyromonas0.0540.020.0403
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speciesLachnospiraceae_bacterium_1_4_56FAA-0.0530.02070.0414
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speciesClostridium_sp_L2_500.0520.02350.0466
speciesPeptostreptococcus_stomatis-0.0520.02420.0478
speciesAcidaminococcus_fermentans0.0520.02480.0488
genusClostridiaceae_noname0.0520.02520.0492
speciesClostridiaceae_bacterium_JC1180.0520.02520.0492
speciesHaemophilus_sputorum-0.0510.02660.0517
speciesStreptococcus_lutetiensis-0.0510.0270.0522
speciesBacteroides_sp_4_3_47FAA0.050.02960.057
speciesSubdoligranulum_unclassified0.050.03010.0577
speciesLachnospiraceae_bacterium_5_1_57FAA-0.050.03020.0577
genusSubdoligranulum0.0490.03260.062
familyBurkholderiales_noname0.0490.03450.0654
genusBurkholderiales_noname0.0480.03770.0709
speciesBurkholderiales_bacterium_1_1_470.0480.03770.0709
speciesBacteroides_fluxus0.0480.03990.0747
speciesLactobacillus_crispatus-0.0470.04030.0752
speciesBifidobacterium_bifidum0.0470.04060.0754
speciesCoprococcus_sp_ART55_10.0470.0410.0759
genusTuricibacter-0.0470.04170.0768
genusMegasphaera0.0470.04180.0768
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0470.04430.0809
speciesClostridium_leptum0.0460.04440.0809
speciesErysipelotrichaceae_bacterium_6_1_45-0.0460.04640.0842
genusClostridiales_noname-0.0460.04780.0864
speciesPorphyromonas_asaccharolytica0.0460.04860.0876
speciesButyrivibrio_unclassified0.0450.04930.0885
speciesClostridium_spiroforme-0.0450.0510.0912
speciesLactobacillus_acidophilus-0.0440.05450.0971
speciesLactobacillus_delbrueckii-0.0440.0550.0976
speciesLactococcus_garvieae0.0440.0590.104
speciesEubacterium_siraeum0.0430.06220.11
speciesEnterobacteria_phage_HK544-0.0430.06370.112
speciesEubacterium_ramulus0.0420.06910.121
genusButyricicoccus-0.0420.07160.124
speciesButyricicoccus_pullicaecorum-0.0420.07160.124
speciesBifidobacterium_breve-0.0410.07390.128
speciesRoseburia_unclassified-0.0410.07520.13
speciesTuricibacter_unclassified-0.0410.07770.133
genusSiphoviridae_noname-0.0410.07870.135
genusPseudoflavonifractor0.040.080.136
speciesPseudoflavonifractor_capillosus0.040.080.136
speciesBacteroides_thetaiotaomicron0.040.08180.138
genusLactococcus-0.040.08450.142
speciesPorphyromonas_uenonis0.040.0850.143
speciesEscherichia_unclassified0.0390.09530.16
genusRuminococcus-0.0380.0970.162
familyRuminococcaceae-0.0380.09810.163
genusMorganella-0.0380.1030.169
genusKlebsiella0.0380.1030.169
speciesMorganella_morganii-0.0380.1030.169
speciesEubacterium_rectale0.0370.1120.184
speciesHaemophilus_paraphrohaemolyticus-0.0360.1180.193
speciesBifidobacterium_catenulatum-0.0360.1240.202
familyClostridiales_noname0.0350.1260.204
speciesLactobacillus_plantarum-0.0350.1280.207
phylumViruses_noname-0.0350.130.209
classViruses_noname-0.0350.130.209
orderCaudovirales-0.0350.1320.211
speciesClostridium_perfringens-0.0350.1340.214
speciesEnterococcus_faecalis-0.0350.1350.215
familyClostridiales_Family_XI_Incertae_Sedis-0.0340.1380.217
genusAdlercreutzia0.0340.1380.217
speciesAdlercreutzia_equolifaciens0.0340.1380.217
orderPasteurellales0.0340.1440.224
familyPasteurellaceae0.0340.1440.224
speciesBacteroides_cellulosilyticus0.0340.1440.224
genusPeptostreptococcaceae_noname-0.0330.150.232
speciesRuminococcus_torques-0.0330.150.232
genusHaemophilus0.0330.1540.238
speciesClostridium_clostridioforme-0.0330.1550.238
speciesSubdoligranulum_sp_4_3_54A2FAA0.0330.1560.239
speciesWeissella_confusa0.0330.1570.24
genusCatenibacterium0.0320.1620.244
speciesOdoribacter_laneus0.0320.1620.244
speciesCatenibacterium_mitsuokai0.0320.1620.244
classErysipelotrichia-0.0320.1630.244
orderErysipelotrichales-0.0320.1630.244
familyErysipelotrichaceae-0.0320.1630.244
speciesAcidaminococcus_unclassified0.0320.1650.246
speciesEubacterium_dolichum-0.0320.1660.246
speciesPrevotella_bivia0.0320.1670.246
speciesCitrobacter_freundii0.0320.1670.246
speciesBacteroides_vulgatus0.0320.1670.246
familyViruses_noname-0.0320.1680.246
genusViruses_noname-0.0320.1680.246
speciesEubacterium_limosum-0.0320.1690.247
genusActinobacillus-0.0320.1720.249
speciesActinobacillus_unclassified-0.0320.1720.249
speciesClostridium_bartlettii-0.0320.1720.249
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0310.1740.251
speciesClostridiales_bacterium_1_7_47FAA-0.0310.1770.255
speciesButyrivibrio_crossotus-0.0310.1780.255
speciesHaemophilus_parainfluenzae0.0310.1780.255
familyStaphylococcaceae-0.0310.1790.255
familySiphoviridae-0.0310.1840.262
speciesOdoribacter_unclassified0.0310.1870.265
speciesGemella_morbillorum-0.030.1880.266
phylumFusobacteria-0.030.1940.272
classFusobacteriia-0.030.1940.272
orderFusobacteriales-0.030.1940.272
familyPeptostreptococcaceae-0.030.1990.278
genusLeuconostoc-0.030.20.278
speciesBacteroides_ovatus0.030.2010.279
genusClostridium-0.0290.2170.299
speciesMegasphaera_elsdenii0.0290.2170.299
speciesDorea_longicatena0.0280.2280.314
genusStaphylococcus-0.0280.230.316
speciesRoseburia_intestinalis0.0270.2350.322
familyFusobacteriaceae-0.0270.2360.322
speciesLactococcus_phage_P680-0.0270.2420.329
speciesCoprobacillus_sp_29_10.0270.2440.331
speciesClostridium_symbiosum-0.0270.2510.339
familyClostridiaceae-0.0260.2560.345
genusErysipelotrichaceae_noname-0.0260.2640.354
speciesParabacteroides_sp_20_30.0260.2640.354
speciesKlebsiella_unclassified-0.0250.2720.364
genusCoriobacteriaceae_noname0.0250.2730.364
genusProteus-0.0250.2830.375
genusFusobacterium-0.0250.2830.375
speciesBacteroides_pectinophilus-0.0240.290.383
genusPhascolarctobacterium-0.0240.2940.387
speciesPhascolarctobacterium_succinatutens-0.0240.2940.387
speciesKlebsiella_sp_MS_92_3-0.0240.30.393
speciesCoprococcus_catus0.0240.3020.395
speciesPrevotella_buccae-0.0240.3030.395
speciesCoriobacteriaceae_bacterium_phI0.0230.320.416
speciesDorea_unclassified-0.0230.3210.416
speciesLactobacillus_reuteri-0.0230.3230.418
genusCitrobacter0.0230.3260.42
genusVeillonella-0.0220.3360.432
speciesStreptococcus_phage_Sfi210.0220.3430.44
speciesLactobacillus_mucosae-0.0220.3440.44
speciesEnterobacter_aerogenes0.0210.3580.457
speciesLactococcus_phage_936_sensu_lato-0.0210.3610.459
speciesCollinsella_intestinalis0.0210.3660.464
genusOlsenella-0.020.3760.476
speciesBacteroides_sp_2_1_220.020.3770.476
speciesStreptococcus_pasteurianus-0.020.390.491
genusMethanosphaera0.020.3940.493
speciesMethanosphaera_stadtmanae0.020.3940.493
speciesBlautia_hydrogenotrophica0.020.3980.497
speciesEubacterium_cylindroides0.0190.4020.501
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0190.4030.501
speciesLactococcus_phage_phi7-0.0190.4080.505
speciesEscherichia_coli-0.0190.4210.52
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0180.4260.525
genusAggregatibacter-0.0180.4320.531
familyCampylobacteraceae-0.0180.4330.531
speciesRuminococcus_bromii-0.0180.4430.542
speciesDorea_formicigenerans0.0170.4590.56
speciesBacteroides_dorei0.0170.4670.568
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0160.4770.579
speciesMethanobrevibacter_unclassified0.0160.4790.58
speciesErysipelotrichaceae_bacterium_3_1_53-0.0160.4830.583
speciesClostridium_bolteae0.0160.4960.597
speciesVeillonella_parvula-0.0160.5010.602
genusCampylobacter-0.0150.5070.607
speciesBacteroides_barnesiae0.0150.5080.607
speciesBacteroides_uniformis0.0150.5090.607
speciesBifidobacterium_angulatum0.0150.5220.621
genusButyrivibrio0.0140.5330.632
speciesStreptococcus_infantarius-0.0140.5350.632
speciesVeillonella_unclassified-0.0140.5360.632
familyLeuconostocaceae-0.0140.5450.641
genusEscherichia-0.0140.5570.654
speciesVeillonella_dispar-0.0130.5740.672
familyMyoviridae-0.0130.5810.679
speciesLactococcus_phage_jm2-0.0120.5920.69
genusWeissella0.0120.5950.692
speciesCitrobacter_unclassified0.0120.60.695
speciesLeuconostoc_lactis0.0120.6010.695
speciesParabacteroides_sp_D130.0120.6190.713
speciesClostridium_sp_KLE_1755-0.0120.6190.713
classGammaproteobacteria-0.0110.6210.713
speciesAlistipes_sp_HGB50.0110.6280.719
speciesClostridium_sp_ATCC_BAA_4420.0110.6380.729
speciesBacteroides_salanitronis0.0110.6430.729
genusParvimonas-0.0110.6440.729
speciesBacteroides_sp_1_1_6-0.0110.6440.729
speciesParvimonas_unclassified-0.0110.6440.729
speciesCoprobacillus_sp_D60.010.6520.736
genusMyoviridae_noname0.010.6690.754
speciesClostridium_hathewayi-0.010.6770.761
phylumEuryarchaeota0.0090.710.794
speciesEubacterium_hallii0.0090.710.794
speciesSutterella_parvirubra0.0080.7160.799
speciesKlebsiella_oxytoca-0.0070.7490.83
classMethanobacteria0.0070.7510.83
orderMethanobacteriales0.0070.7510.83
familyMethanobacteriaceae0.0070.7510.83
speciesBifidobacterium_adolescentis-0.0070.7570.835
speciesParabacteroides_unclassified-0.0070.7590.835
genusGordonibacter0.0070.7720.845
speciesGordonibacter_pamelaeae0.0070.7720.845
speciesPeptostreptococcaceae_noname_unclassified0.0060.7830.85
speciesOscillibacter_sp_KLE_1728-0.0060.790.85
phylumVerrucomicrobia-0.0060.7910.85
classVerrucomicrobiae-0.0060.7910.85
orderVerrucomicrobiales-0.0060.7910.85
familyVerrucomicrobiaceae-0.0060.7910.85
genusAkkermansia-0.0060.7910.85
speciesAkkermansia_muciniphila-0.0060.7910.85
genusTunalikevirus-0.0060.7970.855
orderViruses_noname-0.0060.80.856
speciesBacteroides_oleiciplenus0.0060.8030.858
speciesWeissella_cibaria-0.0060.8080.861
speciesPeptostreptococcus_anaerobius0.0050.8170.866
orderCoriobacteriales-0.0050.8180.866
familyCoriobacteriaceae-0.0050.8180.866
speciesProteus_mirabilis-0.0050.840.886
speciesLactobacillus_sanfranciscensis-0.0050.8410.886
speciesRuminococcus_champanellensis0.0050.8430.886
speciesCollinsella_unclassified0.0040.8460.887
genusPeptoniphilus0.0040.8490.887
genusEubacterium0.0040.8530.887
orderEnterobacteriales-0.0040.8550.887
familyEnterobacteriaceae-0.0040.8550.887
speciesC2likevirus_unclassified0.0040.8550.887
genusDorea-0.0040.860.89
familyEubacteriaceae0.0040.8620.89
genusC2likevirus0.0040.8660.892
speciesVeillonella_atypica-0.0040.8730.898
classEpsilonproteobacteria-0.0030.8870.907
orderCampylobacterales-0.0030.8870.907
speciesAggregatibacter_segnis0.0030.8880.907
speciesKlebsiella_phage_KP360.0030.9010.919
genusLambdalikevirus-0.0020.9160.932
familyPodoviridae-0.0020.940.954
speciesRuminococcus_obeum-0.0010.9640.976
speciesOlsenella_unclassified0.0010.9690.979
speciesLactococcus_phage_bIL670.0010.9710.979
speciesCoprococcus_eutactus0.00.9840.99
genusMethanobrevibacter0.00.9870.991
speciesMethanobrevibacter_smithii0.00.9960.997
speciesHoldemania_sp_AP20.00.9970.997
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.05557373142310.08224527473620.000516293802705670222.5134
Type II diabetesSweden53920.03557045596260.03022440646030.0844821723201316110.7044
Crohns diseaseSpain17660.04011975354820.05413192336990.1924804103211660855.2219
Ulcerative colitisSpain78660.04498626750480.05413192336990.2397909616351196239.4603
Type II diabetesDenmark752770.04774844469830.04175238956050.2694944582781487748.7659
Rheumatoid arthritisChina127980.05283328192260.06187982687870.2750056737421128037.6163
Colorectal cancerAustria64350.02578989655350.02363010113050.5410953688891927965.2287
Type II diabetesChina1831850.05586735098490.06379801448220.6157990913162315576.5227
ObesityDenmark1691230.04089318418790.04260119782430.8310202360292698988.7475
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382