MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:07:53 PST
Job id & description: 2394, purine14
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
HT25A_GL00708483409458CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0447_GL00148053419737CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC10-2_GL00107703423565CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.CD1-0-PT_GL00646463402571CompleteK00772COG0005unknownunknown100.0100.0100.0
O2.UC44-1_GL01567973403632CompleteK00772COG0005FirmicutesMegasphaera100.0100.0100.0
MH0138_GL00509673396302CompleteK00772COG0005FirmicutesMegasphaera100.0100.0100.0
MH0229_GL00641663397978CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0107_GL00768383430652CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0197_GL00538563397466CompleteK00777COG2820unknownunknown100.0100.0100.0
MH0370_GL00083713400399Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
O2.UC24-2_GL00082323403174CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD22-0_GL00874273404459CompleteK00772COG0005FirmicutesMegasphaera100.0100.0100.0
388919.SSA_12583411009CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
DLM001_GL00903723407060CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0009_GL00321673411671CompleteK05810COG1496unknownunknown100.0100.0100.0
T2D-203A_GL00916023408834CompleteK03784COG0813FirmicutesEubacterium100.0100.0100.0
DLM013_GL00521173407139CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0165_GL01031813414166CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0277_GL00477663433745Lack 3'-endK03783COG1683;COG3272ProteobacteriaKlebsiella100.0100.0100.0
NLM031_GL00009983407597CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC17-1_GL00707613420497CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
T2D-62A_GL00010273409136CompleteK00772COG0005unknownunknown100.0100.0100.0
V1.CD41-0_GL00346093422434CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC38-4_GL00079083424113CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
MH0003_GL00288343411452CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
MH0022_GL00022053429489CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0236_GL00363363398121CompleteK00772COG0005FirmicutesVeillonella100.0100.0100.0
MH0372_GL00932423435412CompleteK00777NOG09378unknownunknown100.0100.0100.0
MH0411_GL00436383401373CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD41-0_GL00391573404830CompleteK00772COG0005FirmicutesVeillonella100.0100.0100.0
V1.CD5-0-PN_GL00499803422529CompleteK00772COG0005unknownunknown100.0100.0100.0
546273.VEIDISOL_011433411228CompleteK00772COG0005FirmicutesVeillonella100.0100.0100.0
MH0006_GL01293473411585CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0192_GL00719273397331CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0262_GL01140253398645CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0335_GL00011103399719CompleteK00772COG0005FirmicutesVeillonella100.0100.0100.0
MH0335_GL00713213399736CompleteK00772COG0005FirmicutesVeillonella100.0100.0100.0
MH0338_GL00881863417179CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0393_GL00833433453544CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0398_GL00217583435996Lack 5'-endK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
O2.UC48-1_GL01646773421468Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
V1.FI04_GL00929223405209CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0126_GL00797703413472CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0224_GL00563263415262CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0224_GL01085823450241CompleteK05810COG1496unknownunknown100.0100.0100.0
T2D-135A_GL01086283443589CompleteK05810COG1496BacteroidetesBacteroides100.0100.0100.0
V1.CD25-0_GL00479103439438CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD37-4_GL00515173439689CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI02_GL00120303440075CompleteK05810COG1496unknownunknown100.0100.0100.0
DLM009_GL00183583407106CompleteK00772COG0005FirmicutesVeillonella100.0100.0100.0
MH0006_GL00394493411546CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0106_GL00389323448070CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0200_GL00987683432336CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0230_GL01416203432814CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0243_GL00577003450533CompleteK05810COG1496unknownunknown100.0100.0100.0
575611.HMPREF0649_011133463778CompleteK05810NOG134282BacteroidetesPrevotella100.0100.0100.0
764588959-stool1_revised3445680CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0197_GL00982213449798Lack 5'-endK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
MH0337_GL01456553399802CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0378_GL00756993400696CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI18_GL00238473440536CompleteK00777COG2820unknownunknown100.0100.0100.0
V1.UC60-0_GL00380843406929CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC7-0_GL01015293456596Lack 5'-endK03784COG0813FirmicutesStreptococcus100.0100.0100.0
V1.CD20-0_GL00862433404370CompleteK03783COG0005unknownunknown100.0100.0100.0
V1.CD44-4_GL00258083422462Lack 5'-endK03784COG0813FirmicutesClostridium100.0100.0100.0
MH0141_GL00782153413732CompleteK05810COG1496BacteroidetesOdoribacter100.0100.0100.0
MH0372_GL00476023400483CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI06_GL01548423405277CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0016_GL00346083429447CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0053_GL00651153447265CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0087_GL00143293447649CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0096_GL00529443465407CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0118_GL01132893448263CompleteK03784COG0813FirmicutesMitsuokella100.0100.0100.0
MH0118_GL01147173465854CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0162_GL01208793466704CompleteK05810COG1496Proteobacteriaunknown100.0100.0100.0
T2D-108A_GL01025543408470CompleteK03784COG0813ProteobacteriaEnterobacter100.0100.0100.0
MH0014_GL00720543446859CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0086_GL01050623447637CompleteK00777NOG09378unknownunknown100.0100.0100.0
MH0327_GL00375833469546CompleteK00777COG2820unknownunknown100.0100.0100.0
MH0200_GL01190853467493CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0227_GL00084533432714CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0440_GL02089733437031CompleteK05810COG1496unknownunknown100.0100.0100.0
T2D-134A_GL00733393443571CompleteK05810COG1496unknownunknown100.0100.0100.0
NLM003_GL00339113425135CompleteK03784COG0813ProteobacteriaEscherichia100.0100.0100.0
556268.OFAG_014153463765CompleteK05810COG1496ProteobacteriaOxalobacter100.0100.0100.0
O2.UC47-2_GL00584193456238CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC62-0_GL01164043459507CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0243_GL00426593450529CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0369_GL00336233417787Lack 3'-endK05810COG1496unknownunknown100.0100.0100.0
MH0417_GL01356513454050CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0098_GL01287993447900CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0372_GL00487903417943CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0280_GL00042083433753CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0028_GL00728863429547CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0048_GL00419083429775Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
MH0437_GL01036643436942CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC48-1_GL00100613456319Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0054_GL00602723464870CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0124_GL00398543430889CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.FI17_GL00533153440459Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
phylumBacteroidetes-0.4141.78e-782.85e-76
classBacteroidia-0.4141.81e-782.85e-76
orderBacteroidales-0.4141.81e-782.85e-76
classGammaproteobacteria0.3121.27e-431.38e-41
genusEscherichia0.3121.46e-431.38e-41
orderLactobacillales0.3099.42e-436.55e-41
orderEnterobacteriales0.3091.11e-426.55e-41
familyEnterobacteriaceae0.3091.11e-426.55e-41
classBacilli0.3074.74e-422.49e-40
speciesEscherichia_coli0.3068.63e-424.07e-40
genusPantoea0.2932.47e-389.72e-37
speciesPantoea_unclassified0.2932.47e-389.72e-37
familyStreptococcaceae0.2852.14e-367.77e-35
phylumFirmicutes0.285.11e-351.72e-33
genusStreptococcus0.2781.74e-345.48e-33
genusBlautia0.2677.23e-322.13e-30
phylumProteobacteria0.2531.1e-283.05e-27
speciesMegasphaera_micronuciformis0.2381.61e-254.22e-24
speciesStreptococcus_parasanguinis0.2355.75e-251.43e-23
speciesStreptococcus_salivarius0.2331.59e-243.75e-23
speciesFusobacterium_nucleatum0.2257.67e-231.72e-21
speciesStreptococcus_vestibularis0.2248.98e-231.93e-21
speciesStreptococcus_gordonii0.227.76e-221.59e-20
familyBacteroidaceae-0.2155.13e-219.69e-20
genusBacteroides-0.2155.13e-219.69e-20
orderActinomycetales0.2122.08e-203.78e-19
familyLactobacillaceae0.2052.93e-195.12e-18
familyActinomycetaceae0.2044.32e-197.28e-18
genusMegasphaera0.2038.96e-191.46e-17
genusActinomyces0.2011.43e-182.24e-17
speciesStreptococcus_sanguinis0.2011.47e-182.24e-17
familyBacillales_noname0.2011.98e-182.83e-17
genusGemella0.2011.98e-182.83e-17
genusLactobacillus0.1993.32e-184.61e-17
speciesStreptococcus_mitis_oralis_pneumoniae0.1993.51e-184.73e-17
classClostridia0.1961.04e-171.33e-16
orderClostridiales0.1961.04e-171.33e-16
familyRikenellaceae-0.1942.67e-173.23e-16
genusAlistipes-0.1942.67e-173.23e-16
speciesEscherichia_unclassified0.1933.8e-174.48e-16
speciesRothia_mucilaginosa0.191.31e-161.51e-15
speciesStreptococcus_anginosus0.1882.14e-162.4e-15
phylumActinobacteria0.1874.21e-164.52e-15
classActinobacteria0.1874.21e-164.52e-15
genusRothia0.1864.34e-164.55e-15
familyMicrococcaceae0.1865.06e-165.19e-15
speciesRuminococcus_torques0.1822.52e-152.53e-14
speciesStreptococcus_mutans0.1812.72e-152.67e-14
speciesCampylobacter_concisus0.1813.05e-152.94e-14
orderBacillales0.1795.5e-155.19e-14
speciesClostridium_ramosum0.1796.84e-156.33e-14
familyOscillospiraceae-0.1789.53e-158.49e-14
genusOscillibacter-0.1789.53e-158.49e-14
speciesBifidobacterium_dentium0.1781.03e-149e-14
speciesCoprobacillus_unclassified0.1761.71e-141.47e-13
familyClostridiaceae0.1743.06e-142.58e-13
genusClostridium0.1734.32e-143.58e-13
speciesOscillibacter_unclassified-0.1734.7e-143.82e-13
genusAnaerostipes0.1691.7e-131.36e-12
genusCoprobacillus0.1691.78e-131.4e-12
speciesParabacteroides_merdae-0.1673.42e-132.65e-12
classErysipelotrichia0.1674.23e-133.12e-12
orderErysipelotrichales0.1674.23e-133.12e-12
familyErysipelotrichaceae0.1674.23e-133.12e-12
genusEnterococcus0.1664.52e-133.28e-12
familyLachnospiraceae0.1665.17e-133.7e-12
familyEnterococcaceae0.1656.02e-134.24e-12
speciesPrevotella_buccae0.1585.57e-123.87e-11
genusParabacteroides-0.1586.85e-124.69e-11
genusCampylobacter0.1561.15e-117.75e-11
speciesClostridium_perfringens0.1561.18e-117.84e-11
orderBifidobacteriales0.1561.22e-117.89e-11
familyBifidobacteriaceae0.1561.22e-117.89e-11
familyPorphyromonadaceae-0.1551.43e-119.12e-11
familyCampylobacteraceae0.1551.47e-119.25e-11
genusDorea0.1551.72e-111.07e-10
genusErysipelotrichaceae_noname0.1542.31e-111.4e-10
genusPeptostreptococcus0.1542.32e-111.4e-10
genusBifidobacterium0.1514.93e-112.95e-10
speciesErysipelotrichaceae_bacterium_21_30.1515e-112.95e-10
speciesLactobacillus_fermentum0.1515.45e-113.18e-10
speciesBacteroides_stercoris-0.1515.94e-113.42e-10
classEpsilonproteobacteria0.156.69e-113.76e-10
orderCampylobacterales0.156.69e-113.76e-10
speciesAlistipes_shahii-0.1498.87e-114.93e-10
speciesAlistipes_putredinis-0.1499.1e-114.99e-10
orderBurkholderiales-0.1481.26e-106.84e-10
familySutterellaceae-0.1481.31e-107.03e-10
speciesBacteroides_ovatus-0.1462.5e-101.33e-09
speciesLactobacillus_salivarius0.1453.07e-101.61e-09
genusOlsenella0.1434.87e-102.53e-09
classBetaproteobacteria-0.1427.39e-103.79e-09
speciesVeillonella_parvula0.1427.51e-103.81e-09
orderCoriobacteriales0.1427.76e-103.86e-09
familyCoriobacteriaceae0.1427.76e-103.86e-09
genusSolobacterium0.1419.74e-104.74e-09
speciesSolobacterium_moorei0.1419.74e-104.74e-09
genusMethanobrevibacter0.141.1e-095.3e-09
speciesMethanobrevibacter_smithii0.1391.49e-097.1e-09
speciesVeillonella_dispar0.1391.71e-098.07e-09
speciesEnterococcus_faecalis0.1373.09e-091.44e-08
classMethanobacteria0.1354.41e-092e-08
orderMethanobacteriales0.1354.41e-092e-08
familyMethanobacteriaceae0.1354.41e-092e-08
phylumEuryarchaeota0.1354.45e-092e-08
speciesLactobacillus_mucosae0.1354.58e-092.04e-08
familyRuminococcaceae0.1337.69e-093.37e-08
genusVeillonella0.1337.7e-093.37e-08
speciesKlebsiella_oxytoca0.1337.98e-093.46e-08
speciesRuminococcus_obeum0.1311.29e-085.54e-08
speciesClostridium_hathewayi0.1311.46e-086.21e-08
speciesLactobacillus_oris0.131.84e-087.75e-08
genusLachnospiraceae_noname0.1292.26e-089.44e-08
speciesPeptostreptococcus_stomatis0.1282.84e-081.18e-07
speciesBacteroides_xylanisolvens-0.1273.2e-081.31e-07
speciesOlsenella_unclassified0.1264.39e-081.79e-07
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1264.72e-081.9e-07
speciesMegasphaera_elsdenii0.1256.11e-082.44e-07
speciesDorea_longicatena0.1247.06e-082.8e-07
speciesAnaerostipes_hadrus0.1248.19e-083.22e-07
speciesLactobacillus_vaginalis0.1239.98e-083.89e-07
familyPrevotellaceae-0.1221.19e-074.6e-07
speciesAggregatibacter_segnis0.121.92e-077.37e-07
genusKlebsiella0.122.06e-077.84e-07
speciesOscillibacter_sp_KLE_1728-0.1192.38e-078.99e-07
speciesVeillonella_atypica0.1192.62e-079.81e-07
familyFusobacteriaceae0.1192.68e-079.96e-07
speciesLactobacillus_gasseri0.1173.82e-071.41e-06
speciesEubacterium_siraeum0.1173.95e-071.45e-06
genusFusobacterium0.1164.8e-071.74e-06
speciesBacteroides_uniformis-0.1165.49e-071.98e-06
speciesRuminococcus_sp_5_1_39BFAA0.1156.72e-072.4e-06
genusAggregatibacter0.1147.09e-072.52e-06
familyVeillonellaceae0.1147.7e-072.68e-06
phylumFusobacteria0.1147.78e-072.68e-06
classFusobacteriia0.1147.78e-072.68e-06
orderFusobacteriales0.1147.78e-072.68e-06
speciesStreptococcus_australis0.1147.87e-072.69e-06
speciesVeillonella_unclassified0.1148.48e-072.86e-06
speciesBacteroides_vulgatus-0.1148.49e-072.86e-06
speciesLachnospiraceae_bacterium_5_1_63FAA0.1139.03e-073.02e-06
genusMorganella0.1121.14e-063.76e-06
speciesMorganella_morganii0.1121.14e-063.76e-06
speciesDorea_formicigenerans0.1121.17e-063.83e-06
speciesEubacterium_hallii0.1121.31e-064.26e-06
speciesClostridium_bolteae0.1111.38e-064.46e-06
speciesBacteroides_massiliensis-0.1111.5e-064.82e-06
speciesRuminococcus_gnavus0.1111.57e-065.01e-06
speciesAcidaminococcus_intestini0.1092.24e-067.1e-06
classNegativicutes0.1092.45e-067.66e-06
orderSelenomonadales0.1092.45e-067.66e-06
speciesBifidobacterium_longum0.1082.57e-067.98e-06
speciesRuminococcus_callidus-0.1082.84e-068.76e-06
speciesErysipelotrichaceae_bacterium_2_2_44A0.1064.12e-061.26e-05
speciesMegamonas_funiformis-0.1055.38e-061.64e-05
speciesKlebsiella_pneumoniae0.1046.01e-061.82e-05
speciesMegamonas_rupellensis-0.1046.39e-061.92e-05
speciesLactobacillus_crispatus0.1038.4e-062.51e-05
genusPrevotella-0.1038.44e-062.51e-05
speciesGemella_morbillorum0.1038.73e-062.58e-05
genusRuminococcus0.1029.07e-062.66e-05
genusOdoribacter-0.1011.17e-053.41e-05
speciesCoprococcus_comes0.1011.22e-053.53e-05
speciesLactobacillus_delbrueckii0.11.52e-054.37e-05
speciesEnterococcus_faecium0.11.62e-054.63e-05
speciesStreptococcus_thermophilus0.0982.11e-056e-05
speciesLactobacillus_casei_paracasei0.0982.18e-056.16e-05
speciesMegasphaera_unclassified0.0982.32e-056.52e-05
speciesHaemophilus_paraphrohaemolyticus0.0944.39e-050.000123
speciesKlebsiella_sp_MS_92_30.0944.7e-050.00013
speciesBacteroides_finegoldii-0.0945.01e-050.000138
speciesCoprococcus_catus0.0935.56e-050.000153
speciesOdoribacter_splanchnicus-0.0935.73e-050.000156
speciesStreptococcus_lutetiensis0.0927.16e-050.000194
speciesAlistipes_finegoldii-0.0927.36e-050.000199
genusCoprococcus0.0918.39e-050.000225
genusClostridiales_noname0.099.21e-050.000246
genusActinobacillus0.099.88e-050.000261
speciesActinobacillus_unclassified0.099.88e-050.000261
speciesBacteroides_faecis-0.090.0001040.000273
genusDialister0.0890.0001110.000289
speciesFusobacterium_varium0.0880.000130.000337
speciesClostridium_clostridioforme0.0870.0001570.000405
speciesBacteroides_thetaiotaomicron-0.0870.0001770.000454
speciesLactobacillus_rhamnosus0.0870.000180.000459
speciesRoseburia_inulinivorans-0.0860.0001860.000472
speciesPrevotella_copri-0.0860.000210.00053
familyBacteroidales_noname-0.0850.0002340.000581
genusBacteroidales_noname-0.0850.0002340.000581
speciesBacteroidales_bacterium_ph8-0.0850.0002340.000581
speciesButyrivibrio_crossotus0.0850.0002370.000586
genusRoseburia-0.0850.0002430.000597
speciesMethanobrevibacter_unclassified0.0840.0002850.000697
speciesMegamonas_hypermegale-0.0840.000290.000706
speciesMitsuokella_unclassified0.0830.0003350.000811
genusMitsuokella0.0820.0003720.000896
speciesBacteroides_plebeius-0.0820.0004040.000968
orderAeromonadales0.0810.0004260.00102
speciesWeissella_cibaria0.0810.0004320.00102
speciesBlautia_producta0.0810.000490.00116
genusEggerthella0.080.0005090.0012
genusButyrivibrio0.080.0005450.00127
speciesRoseburia_intestinalis-0.080.000550.00128
speciesLachnospiraceae_bacterium_2_1_58FAA0.080.0005620.0013
genusWeissella0.0790.000590.00136
speciesHaemophilus_sputorum0.0790.0006230.00143
genusSiphoviridae_noname0.0790.0006280.00143
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speciesKlebsiella_unclassified0.0760.001070.0023
speciesEubacterium_eligens-0.0760.001070.0023
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speciesAlistipes_onderdonkii-0.0730.001510.00314
speciesFusobacterium_ulcerans0.0730.001560.00323
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speciesWeissella_confusa0.0670.003690.00728
speciesBacteroides_fragilis0.0670.00370.00728
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speciesDialister_invisus0.0660.00420.00799
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speciesErysipelotrichaceae_bacterium_6_1_450.0660.00450.0085
speciesLachnospiraceae_bacterium_1_4_56FAA0.0650.004620.00869
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speciesBifidobacterium_adolescentis0.0630.006650.0123
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genusSutterella-0.0620.007480.0137
genusButyricicoccus0.0610.007950.0145
speciesButyricicoccus_pullicaecorum0.0610.007950.0145
genusSubdoligranulum0.0610.008130.0148
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speciesEnterobacter_aerogenes0.0610.008670.0156
speciesSubdoligranulum_unclassified0.060.008960.0161
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speciesLactobacillus_plantarum0.0580.01170.0208
speciesBacteroides_nordii-0.0580.01230.0217
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speciesBacteroides_sp_2_1_22-0.0570.01440.0252
speciesStreptococcus_infantarius0.0560.01480.0258
genusParvimonas0.0560.0150.026
speciesEnterobacteria_phage_HK5440.0560.01520.0262
speciesParvimonas_unclassified0.0560.01520.0262
speciesEubacterium_ramulus0.0560.01570.0269
speciesProteus_mirabilis0.0560.01580.027
speciesEubacterium_rectale-0.0540.02020.0344
speciesOscillibacter_sp_KLE_1745-0.0540.02040.0346
speciesParaprevotella_xylaniphila-0.0530.02190.037
speciesBacteroides_eggerthii-0.0520.02350.0396
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phylumVerrucomicrobia0.0520.02480.0408
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familyVerrucomicrobiaceae0.0520.02480.0408
genusAkkermansia0.0520.02480.0408
speciesAkkermansia_muciniphila0.0520.02480.0408
speciesLactobacillus_reuteri0.0520.02590.0424
familyMyoviridae0.0510.02810.0459
speciesAcidaminococcus_fermentans0.050.02910.0474
speciesHoldemania_unclassified-0.050.02960.048
genusButyricimonas-0.050.03080.0496
speciesButyricimonas_synergistica-0.050.03080.0496
speciesBifidobacterium_catenulatum0.0490.03280.0527
speciesBacteroides_fluxus-0.0490.03580.0573
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speciesPseudoflavonifractor_capillosus0.0480.03820.0607
speciesEubacterium_cylindroides0.0480.03970.0628
speciesBacteroides_salyersiae-0.0480.03980.0628
classDeltaproteobacteria-0.0470.04150.0649
orderDesulfovibrionales-0.0470.04150.0649
familyDesulfovibrionaceae-0.0470.04150.0649
speciesOdoribacter_laneus0.0470.0430.067
speciesCoprococcus_eutactus0.0460.0470.073
genusLactococcus0.0460.04740.0734
speciesLachnospiraceae_bacterium_5_1_57FAA0.0460.0480.074
speciesParabacteroides_distasonis-0.0460.04810.074
speciesCollinsella_intestinalis-0.0450.05390.0823
speciesEubacterium_ventriosum-0.0450.05390.0823
speciesPrevotella_stercorea-0.0440.05720.0871
familyClostridiales_noname0.0440.05740.0871
speciesBacteroides_salanitronis0.0440.05760.0871
speciesBacteroides_pectinophilus0.0410.07710.116
genusFlavonifractor-0.040.08220.123
speciesFlavonifractor_plautii-0.040.08220.123
speciesParabacteroides_goldsteinii-0.040.08340.125
orderCaudovirales0.0390.08780.131
speciesRuminococcus_champanellensis0.0390.08870.132
speciesLactococcus_lactis0.0390.09210.136
speciesStreptococcus_phage_Sfi210.0390.0940.139
genusLeuconostoc0.0390.09530.14
genusLambdalikevirus0.0380.10.147
speciesErysipelotrichaceae_bacterium_3_1_530.0380.1020.149
orderPseudomonadales0.0380.1030.15
speciesBacteroides_cellulosilyticus-0.0380.1040.151
genusPeptostreptococcaceae_noname0.0370.1050.152
genusMethanosphaera0.0370.1120.161
speciesMethanosphaera_stadtmanae0.0370.1120.161
speciesAlistipes_senegalensis-0.0370.1120.161
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0370.1130.162
speciesBacteroides_sp_4_3_47FAA-0.0360.1190.169
speciesRoseburia_unclassified0.0360.1190.169
speciesBilophila_wadsworthia-0.0360.1210.171
speciesAnaerotruncus_unclassified0.0360.1210.171
speciesClostridium_sp_KLE_1755-0.0350.1320.186
speciesLactococcus_phage_P6800.0340.1390.195
genusPeptoniphilus0.0340.1410.197
speciesBacteroides_intestinalis-0.0340.1460.204
genusSutterellaceae_unclassified-0.0330.1490.207
speciesPeptostreptococcus_anaerobius0.0330.1540.214
speciesHoldemania_sp_AP20.0330.1550.215
speciesPropionibacterium_freudenreichii0.0320.1610.222
genusParaprevotella-0.0320.1630.224
genusParasutterella-0.0320.1640.224
speciesParasutterella_excrementihominis-0.0320.1640.224
speciesC2likevirus_unclassified-0.0320.1660.226
genusOxalobacter0.0320.1730.235
speciesOxalobacter_formigenes0.0320.1730.235
familyOxalobacteraceae0.0310.1790.242
speciesCollinsella_tanakaei-0.0310.180.242
speciesParaprevotella_unclassified-0.0310.180.242
familySuccinivibrionaceae0.0310.1810.243
genusC2likevirus-0.0310.1850.247
speciesEggerthella_sp_1_3_56FAA0.0310.1860.248
speciesCoprobacillus_sp_D60.030.1920.255
genusSuccinatimonas0.030.1930.255
speciesSuccinatimonas_hippei0.030.1930.255
familyViruses_noname0.030.1990.262
genusViruses_noname0.030.1990.262
speciesBacteroides_dorei-0.030.20.262
speciesAlistipes_unclassified0.0290.2080.272
speciesBacteroides_clarus-0.0270.2370.309
speciesParaprevotella_clara-0.0270.2440.317
speciesEubacterium_limosum0.0270.2480.322
speciesDorea_unclassified-0.0270.250.323
speciesKlebsiella_phage_KP36-0.0260.2580.333
familyPodoviridae0.0250.2860.368
genusDesulfovibrio0.0250.2870.368
speciesBacteroides_sp_3_1_19-0.0240.2920.374
familyBurkholderiales_noname-0.0240.3010.384
genusClostridiaceae_noname0.0230.3110.395
speciesClostridiaceae_bacterium_JC1180.0230.3110.395
speciesLactobacillus_acidophilus-0.0230.3230.409
speciesPrevotella_bivia-0.0230.3280.414
genusBurkholderiales_noname-0.0220.340.427
speciesBurkholderiales_bacterium_1_1_47-0.0220.340.427
speciesBacteroides_coprocola-0.0220.3510.439
genusCoprobacter-0.0220.3530.44
speciesCoprobacter_fastidiosus-0.0220.3530.44
genusHoldemania-0.0210.3580.445
speciesParabacteroides_sp_20_3-0.0210.3670.455
genusHaemophilus-0.0210.370.457
speciesBifidobacterium_bifidum0.0210.3730.46
speciesBifidobacterium_pseudocatenulatum0.020.390.479
speciesHaemophilus_parainfluenzae-0.020.3960.485
speciesParabacteroides_johnsonii-0.020.3970.485
speciesSlackia_piriformis-0.0190.4040.493
familySiphoviridae0.0190.4160.506
orderPasteurellales-0.0190.420.508
familyPasteurellaceae-0.0190.420.508
genusGordonibacter0.0180.4250.512
speciesGordonibacter_pamelaeae0.0180.4250.512
speciesHoldemania_filiformis-0.0180.4390.527
speciesFusobacterium_mortiferum0.0180.4420.53
genusPropionibacterium0.0180.4450.532
genusAcidaminococcaceae_unclassified0.0180.4480.534
genusCatenibacterium0.0170.4560.54
speciesCatenibacterium_mitsuokai0.0170.4560.54
genusFaecalibacterium-0.0170.4580.54
speciesFaecalibacterium_prausnitzii-0.0170.4580.54
speciesCoprococcus_sp_ART55_10.0170.460.541
speciesLactobacillus_ruminis0.0170.4610.541
speciesTuricibacter_unclassified-0.0170.4640.542
speciesClostridium_asparagiforme0.0170.4640.542
speciesLachnospiraceae_bacterium_3_1_46FAA0.0170.470.548
genusCoriobacteriaceae_noname-0.0170.4740.551
speciesEubacterium_sp_3_1_31-0.0160.4920.571
genusTunalikevirus-0.0160.50.578
speciesBifidobacterium_angulatum-0.0150.5070.585
genusPyramidobacter-0.0150.5120.588
speciesPyramidobacter_piscolens-0.0150.5120.588
speciesPorphyromonas_uenonis0.0150.530.606
speciesOdoribacter_unclassified-0.0150.530.606
genusAnaerotruncus0.0140.5510.628
speciesClostridium_sp_L2_50-0.0130.5630.64
speciesCoriobacteriaceae_bacterium_phI-0.0130.5680.644
genusTuricibacter-0.0130.5720.646
speciesEubacterium_biforme0.0130.5720.646
speciesButyrivibrio_unclassified0.0130.5850.659
speciesLachnospiraceae_bacterium_7_1_58FAA-0.0130.5870.66
speciesLactococcus_phage_phi70.0120.5970.669
familyPropionibacteriaceae-0.0120.6040.676
speciesLactobacillus_sanfranciscensis0.0110.6360.71
speciesLactococcus_phage_jm20.0110.6380.71
speciesLactococcus_phage_936_sensu_lato0.0110.640.711
genusSlackia0.0110.6490.717
speciesAcidaminococcus_unclassified0.0110.6490.717
speciesClostridium_bartlettii0.010.6590.727
speciesClostridium_sp_ATCC_BAA_442-0.010.6740.742
genusPorphyromonas0.010.6810.748
genusRuminococcaceae_noname0.0090.6860.75
speciesRuminococcaceae_bacterium_D160.0090.6860.75
speciesBlautia_hydrogenotrophica-0.0090.6960.759
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0090.7040.764
speciesEubacterium_dolichum0.0090.7040.764
speciesStreptococcus_pasteurianus0.0090.7070.765
speciesBacteroides_coprophilus0.0080.7170.774
speciesBacteroides_barnesiae-0.0080.7180.774
speciesCoprobacillus_sp_29_1-0.0080.7290.783
speciesDesulfovibrio_piger0.0080.730.783
speciesClostridium_citroniae0.0080.7380.79
genusPhascolarctobacterium0.0080.7420.79
speciesPhascolarctobacterium_succinatutens0.0080.7420.79
speciesSutterella_parvirubra0.0080.7430.79
genusStaphylococcus-0.0070.7460.791
speciesSubdoligranulum_sp_4_3_54A2FAA0.0070.7620.8
phylumSynergistetes0.0070.7630.8
classSynergistia0.0070.7630.8
orderSynergistales0.0070.7630.8
familySynergistaceae0.0070.7630.8
speciesBacteroides_sp_1_1_60.0070.7660.801
speciesLactococcus_phage_bIL670.0070.7670.801
speciesBifidobacterium_animalis0.0070.7770.81
speciesTuricibacter_sanguinis-0.0060.780.811
speciesLachnospiraceae_bacterium_2_1_46FAA0.0060.7950.824
genusMyoviridae_noname0.0060.7960.824
speciesLeuconostoc_lactis-0.0060.8110.838
speciesClostridium_spiroforme-0.0050.8350.861
speciesAlistipes_sp_HGB5-0.0050.8380.862
speciesPeptostreptococcaceae_noname_unclassified-0.0040.8650.888
speciesBacteroides_oleiciplenus0.0030.8860.907
speciesRuminococcus_sp_JC3040.0030.890.907
speciesDesulfovibrio_desulfuricans0.0030.890.907
speciesCollinsella_unclassified-0.0020.9150.931
familyStaphylococcaceae-0.0020.9190.933
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0020.9380.95
genusAdlercreutzia0.0010.9550.962
speciesAdlercreutzia_equolifaciens0.0010.9550.962
speciesParabacteroides_sp_D130.0010.9560.962
speciesPorphyromonas_asaccharolytica0.0010.9610.965
speciesRuminococcus_lactaris0.0010.9730.975
speciesClostridium_leptum-0.0010.9750.975
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.09119891935490.03301935822553.04418358769e-136862.30441
Type II diabetesChina1831850.07162388370950.05262222210690.0013089739223517945.92881
Type II diabetesDenmark752770.06403750432730.04936323822330.0101098194286436214.2984
Crohns diseaseSpain17660.06397009746040.04027147855130.03436961022381057935.1754
Colorectal cancerAustria64350.08780449950190.05884524422170.181626676632781426.4379
Type II diabetesSweden53920.05596731725810.06303737492530.3506908846731176239.8307
Rheumatoid arthritisChina127980.05141262680990.05003279239590.5186270201481806460.2394
Ulcerative colitisSpain78660.03833867309550.04027147855130.6011982195612163571.3697
ObesityDenmark1691230.04950661560560.05570669372180.8905618205732821492.7756
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382