MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:09:24 PST
Job id & description: 2396, purine16
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0189_GL00410213596531CompleteK05810COG1496unknownunknown100.0100.0100.0
658659.HMPREF0983_032623611825CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
V1.CD3-0-PN_GL00550393604550CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
O2.UC15-0_GL00888643602743CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0415_GL02023033601190CompleteK05810COG1496unknownunknown100.0100.0100.0
T2D-63A_GL00674183628537CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.CD54-0_GL00776863586162CompleteK00777COG2820FirmicutesAnaerostipes100.0100.0100.0
V1.FI17_GL00044333586747Lack 5'-endK05810COG1496Bacteroidetesunknown100.0100.0100.0
MH0349_GL01687733580770Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
V1.CD54-0_GL01412853586190CompleteK00777COG2820unknownunknown100.0100.0100.0
MH0368_GL01746273581178CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
MH0383_GL01084443581666CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
O2.CD1-0-PT_GL01131813583650CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
V1.CD40-0_GL01641723585954CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
210007.SMU_2126c3611464CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
467705.SGO_03473592729CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
DLM023_GL00716653588620CompleteK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
MH0265_GL01471803579316CompleteK00777NOG09378;COG2820FirmicutesStreptococcus100.0100.0100.0
159247771-stool2_revised3591610CompleteK03784COG0813unknownunknown100.0100.0100.0
388919.SSA_20463592720CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
469609.HMPREF0847_003583592879CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
864570.HMPREF9189_18243593078CompleteK00777COG2820FirmicutesStreptococcus100.0100.0100.0
888833.HMPREF9961_02753593111CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
MH0004_GL00349443631097CompleteK03784COG0813unknownunknown100.0100.0100.0
NOM014_GL00540103608038Lack 5'-endK00777COG2820unknownunknown100.0100.0100.0
SZEY-43A_GL00175263608632Lack 5'-endK05810COG1496FirmicutesVeillonella100.0100.0100.0
T2D-47A_GL00632063590607CompleteK00777NOG09378Firmicutesunknown100.0100.0100.0
435842.HMPREF0848_007103592810CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
DOM022_GL00177553588830CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0006_GL01131023574745CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0400_GL00764203582060Lack 3'-endK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0420_GL00518973582574CompleteK03784COG0813unknownunknown100.0100.0100.0
N056A_GL00577843589615CompleteK00777NOG09378;COG2820FirmicutesStreptococcus100.0100.0100.0
NOM026_GL00479183589259CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
O2.CD1-0_GL00238263583612CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
O2.UC27-1_GL01225523621978CompleteK03783COG0005FirmicutesFaecalibacterium100.0100.0100.0
T2D-31A_GL00131983590502CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
MH0006_GL02255603593387CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0260_GL00746403579189CompleteK03783COG0005unknownunknown100.0100.0100.0
NLM027_GL00385893589026CompleteK00777NOG09378;COG2820FirmicutesStreptococcus100.0100.0100.0
NLM027_GL00780293589044CompleteK00777NOG09378;COG2820FirmicutesStreptococcus100.0100.0100.0
871237.SIN_01143593092CompleteK00777NOG09378;COG2820FirmicutesStreptococcus100.0100.0100.0
MH0276_GL00470103617106CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0347_GL00887653580747Lack 3'-endK03783COG0005unknownunknown100.0100.0100.0
O2.CD2-0_GL00658923583674CompleteK03783COG0005unknownunknown100.0100.0100.0
O2.UC43-0_GL00063613584745CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0068_GL00133643632182CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0200_GL00938553578152CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0221_GL00458973578503CompleteK00757COG2820unknownunknown100.0100.0100.0
V1.CD7-4_GL00611393586325CompleteK00777COG2820FirmicutesClostridium100.0100.0100.0
V1.UC35-0_GL00342073625553Lack 5'-endK03784COG0813Firmicutesunknown100.0100.0100.0
HT14A_GL00389333590994CompleteK00777NOG09378FirmicutesClostridium100.0100.0100.0
MH0014_GL00583063575064CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0052_GL00438953631950CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0277_GL00045903617157Lack 5'-endK03784COG0813Firmicutesunknown100.0100.0100.0
MH0404_GL01621563582173CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
O2.CD2-0_GL00549023583671CompleteK03783COG0005unknownunknown100.0100.0100.0
1000570.HMPREF9966_18653611586CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
388919.SSA_06013611516CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
MH0011_GL01054993574905CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0069_GL00129333575705CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0092_GL00327163575982CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0106_GL00340013576325CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0132_GL00501783576794CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0193_GL00867973615512CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0400_GL00400263582050CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
SZEY-24A_GL00245243589785CompleteK03783COG0005BacteroidetesPrevotella100.0100.0100.0
T2D-31A_GL00649163609269CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
467705.SGO_04873611530CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
742820.HMPREF9459_000053611862CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
MH0107_GL00627083576343CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0138_GL00248193576879CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0138_GL00383483576888CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0283_GL00688973579697CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-45A_GL00243013590582CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
706437.HMPREF0813_018483611858CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
DOM005_GL00534143588747CompleteK03783COG0005BacteroidetesBacteroides100.0100.0100.0
MH0031_GL00212883575243CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0402_GL01074983582101CompleteK03783COG0005BacteroidetesBacteroides100.0100.0100.0
T2D-105A_GL01283903589963CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
T2D-57A_GL00104873609419Lack 3'-endK03783COG0005unknownunknown100.0100.0100.0
V1.CD40-0_GL01024243604768CompleteK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
V1.UC14-1_GL00353363587354CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0351_GL01164573580794CompleteK03783COG0005unknownunknown100.0100.0100.0
N085A_GL00512633589677CompleteK03783COG0005BacteroidetesBacteroides100.0100.0100.0
T2D-107A_GL01614193590002CompleteK00757COG0813unknownunknown100.0100.0100.0
T2D-48A_GL00824593590624CompleteK03783COG0005BacteroidetesBacteroides100.0100.0100.0
MH0020_GL00677793631595CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0046_GL00335743575410CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0161_GL00472153596067Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0250_GL01137223578999CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0401_GL00859943619727Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0432_GL00415813620478CompleteK05810COG1496Proteobacteriaunknown100.0100.0100.0
MH0199_GL01294133615674CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0243_GL01225443578880CompleteK03783COG0005unknownunknown100.0100.0100.0
762983.HMPREF9444_008133630917CompleteK05810COG1496ProteobacteriaSuccinatimonas100.0100.0100.0
MH0305_GL01008023617581CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0267_GL01607213616941CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0428_GL00858933620384Lack 3'-endK05810COG1496unknownunknown100.0100.0100.0
MH0119_GL00247643614013CompleteK00772COG0005ProteobacteriaSutterella100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyPrevotellaceae0.2391.13e-255.33e-23
familySutterellaceae0.1986.3e-181.34e-15
speciesAlistipes_senegalensis0.1978.49e-181.34e-15
speciesPrevotella_stercorea0.191.4e-161.65e-14
genusCatenibacterium0.1865.3e-163.86e-14
speciesCatenibacterium_mitsuokai0.1865.3e-163.86e-14
speciesSutterella_wadsworthensis0.1865.73e-163.86e-14
speciesEubacterium_eligens0.1857.11e-164.17e-14
phylumFirmicutes0.1857.95e-164.17e-14
genusSutterella0.1841.19e-155.62e-14
genusFaecalibacterium0.1831.52e-155.98e-14
speciesFaecalibacterium_prausnitzii0.1831.52e-155.98e-14
genusPrevotella0.1831.76e-156.39e-14
genusEggerthella-0.1813.16e-151.07e-13
classBetaproteobacteria0.185.2e-151.64e-13
speciesParaprevotella_xylaniphila0.1796.3e-151.86e-13
speciesEggerthella_unclassified-0.1797.33e-152.04e-13
genusButyrivibrio0.1781.05e-142.75e-13
orderBurkholderiales0.1761.82e-144.52e-13
genusParaprevotella0.1752.23e-145.26e-13
speciesParaprevotella_unclassified0.1742.98e-146.7e-13
speciesPrevotella_copri0.1726.56e-141.41e-12
speciesMitsuokella_unclassified0.1682.4e-134.93e-12
genusMitsuokella0.1673.49e-136.86e-12
familyAcidaminococcaceae0.1631.37e-122.59e-11
orderPasteurellales0.1594.19e-127.32e-11
familyPasteurellaceae0.1594.19e-127.32e-11
genusHaemophilus0.1586.98e-121.18e-10
speciesParaprevotella_clara0.1561.03e-111.68e-10
speciesHaemophilus_parainfluenzae0.1561.22e-111.92e-10
genusPhascolarctobacterium0.1541.88e-112.77e-10
speciesPhascolarctobacterium_succinatutens0.1541.88e-112.77e-10
speciesRuminococcus_gnavus-0.1542.03e-112.9e-10
speciesBacteroides_eggerthii0.1532.7e-113.75e-10
classNegativicutes0.157.43e-119.74e-10
orderSelenomonadales0.157.43e-119.74e-10
genusDesulfovibrio0.1481.18e-101.51e-09
familyBacteroidaceae-0.1452.95e-103.57e-09
genusBacteroides-0.1452.95e-103.57e-09
speciesButyrivibrio_crossotus0.1444.07e-104.8e-09
genusMegasphaera0.1444.24e-104.88e-09
classErysipelotrichia0.1372.99e-093.21e-08
orderErysipelotrichales0.1372.99e-093.21e-08
familyErysipelotrichaceae0.1372.99e-093.21e-08
classClostridia0.1354.58e-094.71e-08
orderClostridiales0.1354.59e-094.71e-08
speciesEubacterium_biforme0.1345.81e-095.83e-08
speciesAnaerotruncus_unclassified0.1345.97e-095.87e-08
speciesVeillonella_atypica0.131.68e-081.62e-07
speciesRuminococcus_callidus0.1282.62e-082.47e-07
speciesVeillonella_unclassified0.1264.76e-084.41e-07
speciesCampylobacter_concisus0.1255.56e-085.05e-07
speciesDesulfovibrio_piger0.1246.72e-085.98e-07
speciesSubdoligranulum_unclassified0.1246.95e-086.07e-07
genusSubdoligranulum0.1247.09e-086.08e-07
orderLactobacillales0.1238.87e-087.48e-07
genusOlsenella0.1239.29e-087.69e-07
genusRoseburia0.1221.18e-079.6e-07
speciesClostridium_sp_L2_500.1211.47e-071.18e-06
speciesRoseburia_hominis0.122.18e-071.71e-06
speciesBacteroides_coprocola0.1192.31e-071.77e-06
speciesBacteroides_faecis0.1192.32e-071.77e-06
speciesStreptococcus_salivarius0.1192.53e-071.9e-06
genusAnaerotruncus0.1192.62e-071.93e-06
genusVeillonella0.1182.77e-071.99e-06
classMethanobacteria0.1182.87e-071.99e-06
orderMethanobacteriales0.1182.87e-071.99e-06
familyMethanobacteriaceae0.1182.87e-071.99e-06
classBacilli0.1182.97e-072.03e-06
speciesLachnospiraceae_bacterium_1_4_56FAA-0.1174.08e-072.75e-06
genusOdoribacter0.1174.3e-072.83e-06
speciesOdoribacter_splanchnicus0.1174.32e-072.83e-06
speciesOlsenella_unclassified0.1165.09e-073.29e-06
familyLactobacillaceae0.1165.26e-073.36e-06
speciesMegasphaera_micronuciformis0.1165.34e-073.36e-06
familyStreptococcaceae0.1155.78e-073.59e-06
genusLactobacillus0.1156.03e-073.69e-06
familyRuminococcaceae0.1156.09e-073.69e-06
familyBacteroidales_noname0.1147.41e-074.32e-06
genusBacteroidales_noname0.1147.41e-074.32e-06
speciesBacteroidales_bacterium_ph80.1147.41e-074.32e-06
genusStreptococcus0.1147.65e-074.4e-06
speciesEggerthella_lenta-0.1147.73e-074.4e-06
genusActinobacillus0.1148.43e-074.68e-06
speciesActinobacillus_unclassified0.1148.43e-074.68e-06
phylumEuryarchaeota0.1131.06e-065.82e-06
speciesParabacteroides_merdae0.1121.3e-067.05e-06
genusCoprococcus0.1121.34e-067.19e-06
speciesStreptococcus_vestibularis0.1111.61e-068.54e-06
genusAggregatibacter0.111.82e-069.54e-06
genusMethanobrevibacter0.112.02e-061.05e-05
speciesEubacterium_siraeum0.1082.58e-061.32e-05
speciesBacteroides_plebeius0.1082.62e-061.33e-05
speciesVeillonella_dispar0.1083.13e-061.57e-05
speciesMethanobrevibacter_smithii0.1073.44e-061.71e-05
genusErysipelotrichaceae_noname0.1073.48e-061.71e-05
speciesDesulfovibrio_desulfuricans0.1064.07e-061.98e-05
speciesClostridium_perfringens0.1064.35e-062.1e-05
speciesVeillonella_parvula0.1054.86e-062.32e-05
speciesLactobacillus_ruminis0.1055.23e-062.47e-05
speciesOscillibacter_unclassified0.1055.8e-062.71e-05
phylumProteobacteria0.1046.03e-062.79e-05
familyEubacteriaceae0.1037.44e-063.39e-05
genusEubacterium0.1037.47e-063.39e-05
speciesAggregatibacter_segnis0.1038.17e-063.67e-05
speciesAlistipes_shahii0.1021.06e-054.72e-05
speciesMegasphaera_unclassified0.1011.15e-055.07e-05
genusCoprobacillus-0.1011.23e-055.38e-05
classEpsilonproteobacteria0.11.36e-055.84e-05
orderCampylobacterales0.11.36e-055.84e-05
genusBarnesiella0.11.44e-056.07e-05
speciesBarnesiella_intestinihominis0.11.44e-056.07e-05
speciesCoprococcus_comes0.0991.81e-057.56e-05
speciesRoseburia_inulinivorans0.0991.95e-058.07e-05
speciesMegasphaera_elsdenii0.0982.06e-058.45e-05
classBacteroidia-0.0982.16e-058.71e-05
orderBacteroidales-0.0982.16e-058.71e-05
phylumBacteroidetes-0.0982.18e-058.72e-05
speciesRoseburia_intestinalis0.0982.2e-058.73e-05
speciesMethanobrevibacter_unclassified0.0963.15e-050.000124
familyOscillospiraceae0.0963.46e-050.000134
genusOscillibacter0.0963.46e-050.000134
speciesMitsuokella_multacida0.0953.89e-050.000149
speciesDialister_succinatiphilus0.0954.12e-050.000157
speciesCoprococcus_sp_ART55_10.0944.58e-050.000173
speciesClostridium_bolteae-0.0944.67e-050.000175
speciesLactobacillus_fermentum0.0935.16e-050.000192
speciesCoprobacillus_unclassified-0.0935.42e-050.0002
genusCampylobacter0.0936.06e-050.00022
familyCampylobacteraceae0.0936.1e-050.00022
familyVeillonellaceae0.0936.1e-050.00022
speciesStreptococcus_anginosus0.0926.43e-050.00023
familyOxalobacteraceae0.0917.69e-050.00027
genusSutterellaceae_unclassified0.0917.69e-050.00027
speciesBacteroides_salanitronis0.0917.73e-050.00027
speciesStreptococcus_gordonii0.0918.3e-050.000288
speciesCoprococcus_eutactus0.099.47e-050.000326
genusOxalobacter0.099.67e-050.000328
speciesOxalobacter_formigenes0.099.67e-050.000328
speciesBacteroides_pectinophilus0.0890.0001120.000375
speciesStreptococcus_parasanguinis0.0890.0001120.000375
speciesLachnospiraceae_bacterium_3_1_46FAA0.0890.0001150.000382
speciesCoprococcus_catus0.0890.0001210.000399
speciesBlautia_hydrogenotrophica-0.0890.0001260.000413
familyLachnospiraceae0.0880.0001440.000466
speciesBifidobacterium_dentium0.0880.0001440.000466
speciesClostridium_nexile-0.0870.0001560.000501
genusRuminococcaceae_noname0.0850.0002170.000687
speciesRuminococcaceae_bacterium_D160.0850.0002170.000687
speciesHaemophilus_sputorum0.0830.0003340.00105
speciesBacteroides_finegoldii0.0830.0003390.00106
speciesRuminococcus_champanellensis0.0830.0003440.00107
genusMethanosphaera0.0820.0003570.00109
speciesMethanosphaera_stadtmanae0.0820.0003570.00109
speciesLactobacillus_vaginalis0.0820.0003610.0011
speciesPrevotella_buccae0.0820.0004080.00123
speciesLachnospiraceae_bacterium_7_1_58FAA0.0820.000410.00123
speciesStreptococcus_mutans0.0810.0004840.00145
speciesButyrivibrio_unclassified0.080.0005030.00149
speciesBacteroides_fragilis-0.0790.0005930.00175
speciesLactobacillus_gasseri0.0790.0006230.00183
speciesAcidaminococcus_intestini0.0780.0006960.00203
speciesEubacterium_rectale0.0780.0007550.00219
genusRothia0.0770.000840.00242
familyMicrococcaceae0.0770.0008740.0025
speciesEubacterium_sp_3_1_31-0.0760.001020.0029
speciesFusobacterium_varium-0.0760.001040.00294
genusCoprobacter0.0760.001070.00299
speciesCoprobacter_fastidiosus0.0760.001070.00299
speciesRothia_mucilaginosa0.0750.001130.00314
genusAcidaminococcus0.0750.001190.00328
speciesParabacteroides_johnsonii0.0750.001240.0034
classDeltaproteobacteria0.0740.001290.00346
orderDesulfovibrionales0.0740.001290.00346
familyDesulfovibrionaceae0.0740.001290.00346
speciesLactobacillus_salivarius0.0740.001290.00346
speciesFusobacterium_nucleatum0.0740.001340.00357
speciesLactobacillus_mucosae0.0730.00160.00424
speciesHaemophilus_paraphrohaemolyticus0.0720.001870.00493
speciesLactobacillus_oris0.0710.002110.00553
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0710.002160.00563
speciesClostridium_symbiosum-0.070.00260.00674
genusButyricimonas0.0690.002750.00705
speciesButyricimonas_synergistica0.0690.002750.00705
speciesClostridium_ramosum-0.0680.003070.00783
speciesStreptococcus_thermophilus0.0660.004210.0107
speciesAcidaminococcus_fermentans0.0640.005450.0138
genusPyramidobacter0.0630.006370.0159
speciesPyramidobacter_piscolens0.0630.006370.0159
speciesLactobacillus_crispatus0.0630.006770.0168
genusParasutterella0.0620.006940.0171
speciesParasutterella_excrementihominis0.0620.006940.0171
speciesCitrobacter_freundii0.0610.008180.02
phylumSynergistetes0.0610.008760.021
classSynergistia0.0610.008760.021
orderSynergistales0.0610.008760.021
familySynergistaceae0.0610.008760.021
speciesFusobacterium_ulcerans-0.060.009270.0221
speciesEubacterium_ramulus0.060.009370.0222
speciesCitrobacter_unclassified0.060.009630.0227
genusCitrobacter0.060.009720.0228
speciesHoldemania_unclassified0.060.009910.0232
orderAeromonadales0.0590.01030.0239
genusBlautia-0.0590.01080.025
speciesAlistipes_finegoldii0.0590.01110.0256
speciesLactococcus_garvieae0.0580.01230.0282
genusEnterobacter0.0580.01280.0292
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speciesBacteroides_barnesiae0.0550.01670.0374
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genusPantoea-0.050.03010.0639
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speciesErysipelotrichaceae_bacterium_6_1_45-0.050.03020.0639
speciesOdoribacter_unclassified0.050.03190.0672
speciesWeissella_cibaria0.0490.0330.0692
speciesEnterobacter_cloacae0.0490.03490.0728
speciesRuminococcus_sp_JC304-0.0490.0350.0728
genusGordonibacter-0.0470.04040.0833
speciesGordonibacter_pamelaeae-0.0470.04040.0833
speciesBacteroides_massiliensis0.0470.04170.0856
speciesParabacteroides_sp_D130.0470.04350.0889
speciesCollinsella_aerofaciens0.0460.0470.0956
speciesKlebsiella_oxytoca0.0450.04920.0997
speciesRuminococcus_lactaris0.0450.05070.102
phylumViruses_noname0.0450.05330.107
classViruses_noname0.0450.05330.107
genusPropionibacterium-0.0440.05630.112
speciesKlebsiella_phage_KP360.0440.05840.116
genusTunalikevirus0.0430.06350.125
speciesLactobacillus_reuteri0.0420.06730.132
speciesClostridium_sp_ATCC_BAA_442-0.0420.06780.133
speciesEnterobacter_aerogenes0.0420.06810.133
speciesRuminococcus_sp_5_1_39BFAA-0.0420.07040.137
familyRikenellaceae0.0420.07240.139
genusAlistipes0.0420.07240.139
speciesAlistipes_putredinis0.0410.07670.147
speciesAlistipes_indistinctus0.040.08230.157
speciesClostridiales_bacterium_1_7_47FAA-0.040.08320.157
speciesRuminococcus_obeum0.040.08320.157
genusButyricicoccus0.040.08330.157
speciesButyricicoccus_pullicaecorum0.040.08330.157
speciesLachnospiraceae_bacterium_5_1_63FAA-0.040.08420.158
speciesPropionibacterium_freudenreichii-0.040.08510.159
speciesBacteroides_vulgatus-0.0390.08950.166
orderActinomycetales0.0390.08990.166
genusCollinsella0.0390.09050.167
speciesAnaerostipes_unclassified-0.0390.09390.172
speciesLactobacillus_amylovorus-0.0390.09570.175
speciesDorea_longicatena0.0380.1010.184
speciesParabacteroides_goldsteinii0.0380.1020.185
speciesEubacterium_dolichum-0.0370.1050.19
speciesStreptococcus_phage_Sfi210.0370.1060.19
speciesLactococcus_phage_bIL670.0370.1060.19
familyPeptostreptococcaceae0.0370.1080.193
speciesBacteroides_caccae0.0370.110.196
genusSuccinatimonas0.0370.1120.198
speciesSuccinatimonas_hippei0.0370.1120.198
genusWeissella0.0370.1140.201
speciesLachnospiraceae_bacterium_8_1_57FAA0.0360.1180.207
speciesEscherichia_unclassified0.0360.1190.208
familyStaphylococcaceae0.0360.1210.211
speciesBacteroides_salyersiae0.0360.1220.212
speciesEnterococcus_faecalis0.0360.1230.213
speciesMegamonas_funiformis0.0360.1240.214
speciesPeptostreptococcus_stomatis0.0350.1260.215
speciesBilophila_wadsworthia0.0350.1260.215
speciesStreptococcus_pasteurianus-0.0350.1270.216
familySuccinivibrionaceae0.0350.130.22
speciesBacteroides_oleiciplenus0.0350.130.22
speciesKlebsiella_sp_MS_92_3-0.0350.1310.221
speciesClostridium_spiroforme-0.0350.1330.223
speciesBacteroides_sp_4_3_47FAA-0.0350.1350.226
speciesWeissella_confusa0.0340.1360.226
speciesAnaerotruncus_colihominis-0.0340.1360.226
speciesLactobacillus_delbrueckii0.0340.1380.229
classGammaproteobacteria0.0340.140.231
speciesParabacteroides_sp_20_30.0340.1420.234
speciesClostridium_sp_KLE_17550.0330.1510.247
speciesBacteroides_cellulosilyticus0.0330.1540.252
genusDorea0.0330.1550.252
genusHoldemania0.0330.1580.256
speciesCollinsella_intestinalis-0.0330.1590.257
speciesBacteroides_intestinalis0.0320.1610.259
speciesParabacteroides_unclassified-0.0320.1630.262
speciesBifidobacterium_adolescentis0.0310.1740.278
genusDialister0.0310.1760.281
speciesEubacterium_cylindroides0.0310.1790.284
speciesLactobacillus_acidophilus-0.0310.180.285
genusClostridiaceae_noname-0.0310.1820.285
genusBilophila0.0310.1820.285
speciesClostridiaceae_bacterium_JC118-0.0310.1820.285
speciesBacteroides_thetaiotaomicron-0.0310.1850.289
genusPeptostreptococcaceae_noname0.0310.1870.291
speciesBilophila_unclassified0.030.1920.298
speciesBacteroides_uniformis-0.030.1930.299
speciesDorea_formicigenerans0.030.1960.302
speciesClostridium_clostridioforme-0.030.1980.304
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.030.1990.305
speciesCoprobacillus_sp_29_1-0.030.2010.307
genusMorganella0.0290.210.319
speciesMorganella_morganii0.0290.210.319
speciesTuricibacter_unclassified0.0290.2120.321
speciesPeptostreptococcaceae_noname_unclassified0.0290.2140.323
speciesHoldemania_filiformis0.0280.220.331
speciesClostridium_leptum-0.0280.2220.332
speciesBacteroides_xylanisolvens0.0280.2220.332
familyBurkholderiales_noname0.0280.2270.338
speciesEscherichia_coli-0.0270.2360.35
speciesAcidaminococcus_unclassified0.0270.2470.363
orderBacillales0.0270.2480.363
genusBurkholderiales_noname0.0270.2480.363
speciesBurkholderiales_bacterium_1_1_470.0270.2480.363
familyActinomycetaceae0.0270.250.363
speciesBacteroides_sp_2_1_220.0270.250.363
speciesClostridium_bartlettii0.0270.250.363
speciesErysipelotrichaceae_bacterium_3_1_530.0270.2520.365
genusEscherichia-0.0260.2550.366
speciesOscillibacter_sp_KLE_1728-0.0260.2550.366
speciesBifidobacterium_catenulatum0.0260.2550.366
familySiphoviridae0.0260.260.372
genusAnaerostipes-0.0260.2690.382
speciesBifidobacterium_animalis0.0260.2690.382
genusStaphylococcus0.0250.2710.384
orderCaudovirales0.0250.2740.386
speciesLachnospiraceae_bacterium_1_1_57FAA0.0250.2740.386
speciesTuricibacter_sanguinis0.0250.2750.386
genusActinomyces0.0250.2760.387
speciesBacteroides_clarus0.0250.2780.388
speciesBacteroides_sp_1_1_6-0.0250.2790.388
familyBacillales_noname0.0250.2860.395
genusGemella0.0250.2860.395
speciesStreptococcus_mitis_oralis_pneumoniae0.0250.2860.395
speciesStreptococcus_sanguinis0.0250.2890.398
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0240.2910.399
genusTuricibacter0.0240.2930.401
familyClostridiales_noname0.0240.3020.412
familyPorphyromonadaceae0.0230.310.422
speciesEubacterium_limosum-0.0230.3190.433
speciesOscillibacter_sp_KLE_1745-0.0230.3260.441
genusFlavonifractor-0.0220.3530.475
speciesFlavonifractor_plautii-0.0220.3530.475
genusLeuconostoc-0.0210.3610.483
speciesRoseburia_unclassified-0.0210.3610.483
speciesPrevotella_bivia-0.0210.3680.491
speciesEubacterium_hallii0.0210.3730.496
speciesEggerthella_sp_1_3_56FAA-0.0210.3750.497
speciesKlebsiella_pneumoniae0.020.3780.5
speciesHoldemania_sp_AP2-0.020.3790.5
genusPeptostreptococcus0.020.3850.506
genusSiphoviridae_noname0.020.3890.51
speciesErysipelotrichaceae_bacterium_21_30.020.390.51
genusKlebsiella0.0190.4130.538
phylumFusobacteria-0.0190.420.543
classFusobacteriia-0.0190.420.543
orderFusobacteriales-0.0190.420.543
genusEnterococcus0.0180.4260.547
genusC2likevirus0.0180.4280.547
speciesEnterococcus_faecium0.0180.4280.547
speciesClostridium_asparagiforme-0.0180.4290.547
familyEnterococcaceae0.0180.430.547
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.0180.430.547
speciesEubacterium_ventriosum-0.0180.4410.56
genusLambdalikevirus0.0180.4430.56
speciesClostridium_citroniae-0.0180.4440.56
orderPseudomonadales-0.0180.4450.56
speciesAlistipes_sp_HGB5-0.0180.4480.562
familyFusobacteriaceae-0.0170.4530.567
speciesC2likevirus_unclassified0.0160.4790.598
speciesRuminococcus_bromii0.0160.4850.604
speciesStreptococcus_infantarius0.0160.4910.61
speciesStreptococcus_lutetiensis0.0160.4940.612
genusFusobacterium-0.0160.4960.613
orderEnterobacteriales-0.0150.5120.629
familyEnterobacteriaceae-0.0150.5120.629
speciesBifidobacterium_bifidum0.0150.5130.629
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.0150.5220.638
familyClostridiales_Family_XI_Incertae_Sedis-0.0150.5290.645
genusPeptoniphilus0.0140.5320.647
phylumActinobacteria0.0140.5440.658
classActinobacteria0.0140.5440.658
genusAdlercreutzia-0.0130.5650.68
speciesAdlercreutzia_equolifaciens-0.0130.5650.68
speciesAlistipes_unclassified0.0130.5750.691
genusMyoviridae_noname-0.0130.5840.698
speciesLactobacillus_rhamnosus0.0130.5840.698
speciesLactobacillus_plantarum0.0130.5860.698
speciesEnterobacteria_phage_HK544-0.0120.6180.735
speciesBacteroides_stercoris-0.0110.6310.748
speciesLactococcus_phage_936_sensu_lato-0.0110.6470.765
genusClostridium0.010.6520.769
speciesParabacteroides_distasonis0.010.6610.777
familyClostridiaceae0.010.6710.777
phylumVerrucomicrobia0.010.6730.777
classVerrucomicrobiae0.010.6730.777
orderVerrucomicrobiales0.010.6730.777
familyVerrucomicrobiaceae0.010.6730.777
genusAkkermansia0.010.6730.777
speciesBifidobacterium_breve-0.010.6730.777
speciesAkkermansia_muciniphila0.010.6730.777
speciesParvimonas_unclassified0.010.6760.778
genusParvimonas0.010.6810.782
speciesPorphyromonas_asaccharolytica-0.0090.6870.787
speciesLactobacillus_casei_paracasei0.0090.6990.799
speciesMegamonas_hypermegale0.0090.7050.804
speciesCollinsella_tanakaei-0.0080.7180.817
genusClostridiales_noname0.0080.7240.817
speciesPeptostreptococcus_anaerobius-0.0080.7240.817
familyMyoviridae0.0080.7260.817
speciesBacteroides_sp_3_1_19-0.0080.7260.817
speciesLactococcus_lactis-0.0080.7280.817
speciesCoriobacteriaceae_bacterium_phI0.0080.7290.817
speciesAlistipes_sp_AP110.0080.7310.818
speciesLachnospiraceae_bacterium_6_1_63FAA0.0080.7420.828
speciesRuminococcus_torques0.0080.7450.829
speciesMegamonas_unclassified0.0070.7490.83
speciesBifidobacterium_longum-0.0070.7490.83
speciesOdoribacter_laneus-0.0070.7670.848
familyPodoviridae-0.0070.770.849
speciesBifidobacterium_angulatum-0.0070.7750.853
speciesDialister_invisus-0.0060.7860.863
genusMegamonas0.0060.7920.866
speciesStreptococcus_australis0.0060.7930.866
speciesGemella_morbillorum0.0060.7950.867
genusPorphyromonas0.0060.80.87
speciesCollinsella_unclassified0.0060.8070.875
genusLactococcus0.0060.8080.875
genusCoriobacteriaceae_noname0.0050.8180.884
speciesPorphyromonas_uenonis0.0050.8220.886
speciesDorea_unclassified-0.0050.8390.902
speciesBifidobacterium_pseudocatenulatum-0.0040.8530.915
speciesAnaerostipes_hadrus-0.0040.8670.928
speciesLactococcus_phage_phi7-0.0040.8720.931
speciesLachnospiraceae_bacterium_5_1_57FAA0.0040.8790.936
genusProteus0.0030.8860.936
speciesBlautia_producta0.0030.8860.936
orderCoriobacteriales-0.0030.8920.936
familyCoriobacteriaceae-0.0030.8920.936
genusSolobacterium0.0030.8920.936
speciesSolobacterium_moorei0.0030.8920.936
familyViruses_noname-0.0030.8950.936
genusViruses_noname-0.0030.8950.936
speciesBacteroides_fluxus0.0030.8960.936
speciesProteus_mirabilis0.0030.9060.944
orderBifidobacteriales0.0030.9110.945
familyBifidobacteriaceae0.0030.9110.945
familyLeuconostocaceae0.0020.9150.946
speciesSlackia_piriformis0.0020.9160.946
genusRuminococcus-0.0020.9180.946
speciesMegamonas_rupellensis-0.0020.9270.952
speciesCoprobacillus_sp_D6-0.0020.9290.952
speciesLachnospiraceae_bacterium_2_1_58FAA0.0020.930.952
speciesBacteroides_nordii-0.0020.9320.952
genusBifidobacterium0.0020.940.957
speciesLactococcus_phage_P680-0.0020.9410.957
genusParabacteroides0.0010.950.963
speciesFusobacterium_mortiferum0.0010.9520.963
speciesLactobacillus_sanfranciscensis-0.0010.9530.963
speciesSutterella_parvirubra-0.0010.9770.985
genusSlackia-0.0010.980.986
speciesLactococcus_phage_jm20.00.9840.988
speciesKlebsiella_unclassified0.00.9860.988
speciesLeuconostoc_lactis0.00.9920.992
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.04592029833160.03945679259970.03980522453641383046.4577
Type II diabetesSweden53920.02878462382310.01817351139060.074133823762428419.62072
Ulcerative colitisSpain78660.04536621357810.03493888275590.122771705574790526.0771
Type II diabetesChina1831850.02837761502880.03561794960810.2267236102021412446.677
Type II diabetesDenmark752770.04500467871250.03934068938190.3547296864621708756.0101
Rheumatoid arthritisChina127980.03590443914520.02797043887320.3976559253671471649.0746
Crohns diseaseSpain17660.03375237196350.03493888275590.5385772225742400779.8238
Colorectal cancerAustria64350.02759762975360.01882224175080.56558812091980266.9982
ObesityDenmark1691230.04139075590740.03610606172850.8503468450242744090.2305
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382