MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:11:54 PST
Job id & description: 2397, purine17
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0396_GL01683413658111CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0398_GL01409673638869CompleteK03784COG0813FirmicutesEubacterium100.0100.0100.0
N001A_GL00627833665562Lack 5'-endK03784COG0813Firmicutesunknown100.0100.0100.0
N037A_GL01044663665676Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
T2D-62A_GL00018173647821CompleteK05810COG1496Firmicutesunknown100.0100.0100.0
V1.CD21-4_GL00388403680300CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0333_GL00409383637233CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0395_GL00669793714275CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD35-1_GL00209853680597CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
BGI-28A_GL01080183683951CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0012_GL00328413650748CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0193_GL01934963710224CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0200_GL00704423729157CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0234_GL00681253710993CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0247_GL01656433729954CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0372_GL00994833732373CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0389_GL00356883732819CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0422_GL00433693658787Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0451_GL01586013734423CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC14-0_GL00472713681997Lack 5'-endK03784COG0813FirmicutesEubacterium100.0100.0100.0
MH0272_GL01641223711758CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0003_GL01147623706651CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0012_GL02048333650853CompleteK03784COG0813FirmicutesMitsuokella100.0100.0100.0
MH0217_GL01011743710677CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0329_GL01431813731375CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0372_GL00334673713648CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0422_GL01017863696106CompleteK03784COG0813unknownunknown100.0100.0100.0
556269.OFBG_014423650235CompleteK05810COG1496ProteobacteriaOxalobacter100.0100.0100.0
MH0040_GL00674533707372CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0134_GL00585283633396CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0389_GL01975093714153CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.CD2-0-PT_GL00642653697182CompleteK05810COG1496FirmicutesCoprobacillus100.0100.0100.0
MH0262_GL00573513711528CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0441_GL00955493696626CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC57-0_GL00018353642206Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
V1.UC34-0_GL00472553720124CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0038_GL00394413669861CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0053_GL00298713707530CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0069_GL00359503707787CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0119_GL00509293708682Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0397_GL00647053714312Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
T2D-81A_GL00772553704287CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0013_GL00170213669583CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0054_GL00170263726377CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0288_GL00799663693162CompleteK00777NOG09378Firmicutesunknown100.0100.0100.0
O2.UC11-1_GL00930453734812CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC39-4_GL00099423664028CompleteK03784COG0813FusobacteriaFusobacterium100.0100.0100.0
MH0021_GL00501053726012CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0028_GL00747323726087CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0088_GL01336733708037CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0227_GL01395483710859CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0422_GL00930473696105Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
T2D-118A_GL00460353722342CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD35-0_GL00277753680587Lack 5'-endK03784COG0813FirmicutesClostridium100.0100.0100.0
MH0006_GL00504113725583CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0055_GL00514473670085CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0203_GL00186783710435CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0288_GL00225383693150CompleteK00777NOG09378Firmicutesunknown100.0100.0100.0
MH0415_GL01498913677008CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0066_GL00378343726552CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0086_GL00438113726781CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0137_GL00949163690180CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0220_GL01563233710725Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0271_GL01316783730420CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0281_GL01461813730708CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC18-2_GL00518663735086CompleteK05810COG1496unknownunknown100.0100.0100.0
T2D-149A_GL00530853722561Lack 5'-endK03784COG0813ProteobacteriaHaemophilus100.0100.0100.0
T2D-29A_GL00156273703865CompleteK00777NOG09378FirmicutesRoseburia100.0100.0100.0
V1.CD46-0_GL01167023718519Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
V1.UC58-4_GL01680933720690CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0011_GL00239753725743CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC48-1_GL00892453736045Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
V1.CD3-0-PT_GL00262463699352CompleteK05810COG1496unknownunknown100.0100.0100.0
158256496-stool1_revised3685773Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
765701615-stool1_revised3706056CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0183_GL01782783728595CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0260_GL00604863673768CompleteK00757COG2820ProteobacteriaKlebsiella100.0100.0100.0
MH0277_GL00381353674200CompleteK00757COG2820ProteobacteriaKlebsiella100.0100.0100.0
V1.UC11-5_GL00315113681905CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0003_GL00956043669243CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0011_GL00256063669430CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0012_GL01697923707021CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0096_GL00153043708145CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0098_GL00067093708212CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0088_GL00087843726813CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0098_GL01029833727050CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0220_GL00411113654414CompleteK00757COG2820unknownunknown100.0100.0100.0
V1.CD15-3_GL00287463736487CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0145_GL00046333690390CompleteK00757COG2820FirmicutesRoseburia100.0100.0100.0
MH0012_GL02283973707049CompleteK00757COG2820unknownunknown100.0100.0100.0
O2.UC44-2_GL00096893679448CompleteK00772COG0005unknownunknown100.0100.0100.0
V1.FI06_GL01462813681164CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0142_GL00596283709130CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0267_GL00782343673941CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0277_GL00247403730614CompleteK05810COG1496unknownunknown100.0100.0100.0
V1.UC33-0_GL01077683682332CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0410_GL00011173676870CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC11-2_GL00746063734840CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC50-2_GL01612113736108CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0277_GL00384953730630CompleteK03783COG1683FirmicutesClostridium100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesEubacterium_eligens0.4838.43e-1103.98e-107
phylumFirmicutes0.3073.24e-427.65e-40
genusMegamonas0.2956.34e-398.6e-37
speciesMegamonas_unclassified0.2957.29e-398.6e-37
speciesMegamonas_hypermegale0.2941.32e-381.25e-36
speciesMegamonas_rupellensis0.2876.98e-375.49e-35
classClostridia0.2723.88e-332.3e-31
orderClostridiales0.2723.89e-332.3e-31
genusRoseburia0.2683.73e-321.96e-30
speciesMegamonas_funiformis0.2481.04e-274.91e-26
genusFaecalibacterium0.2414.23e-261.66e-24
speciesFaecalibacterium_prausnitzii0.2414.23e-261.66e-24
speciesRoseburia_hominis0.2414.61e-261.67e-24
speciesRoseburia_inulinivorans0.2399.58e-263.03e-24
familyEubacteriaceae0.2391e-253.03e-24
genusEubacterium0.2391.05e-253.03e-24
phylumBacteroidetes-0.2391.21e-253.03e-24
classBacteroidia-0.2391.22e-253.03e-24
orderBacteroidales-0.2391.22e-253.03e-24
familyLachnospiraceae0.2222.92e-226.89e-21
familyRuminococcaceae0.2071.33e-192.99e-18
speciesAlistipes_senegalensis0.191.27e-162.72e-15
familyVeillonellaceae0.1831.76e-153.61e-14
genusCoprococcus0.1822.35e-154.62e-14
classNegativicutes0.183.93e-157.13e-14
orderSelenomonadales0.183.93e-157.13e-14
speciesCoprococcus_catus0.1771.49e-142.6e-13
speciesRuminococcus_obeum0.1735.1e-148.6e-13
familyOxalobacteraceae0.1692.13e-133.47e-12
genusOxalobacter0.1682.39e-133.64e-12
speciesOxalobacter_formigenes0.1682.39e-133.64e-12
orderPasteurellales0.1683.08e-134.41e-12
familyPasteurellaceae0.1683.08e-134.41e-12
genusHaemophilus0.1656.36e-138.83e-12
speciesHaemophilus_parainfluenzae0.1649.18e-131.24e-11
genusBarnesiella0.1631.21e-121.53e-11
speciesBarnesiella_intestinihominis0.1631.21e-121.53e-11
speciesRuminococcus_lactaris0.1631.23e-121.53e-11
familyBacteroidaceae-0.1594.16e-124.91e-11
genusBacteroides-0.1594.16e-124.91e-11
genusAggregatibacter0.1542.25e-112.59e-10
speciesRuminococcus_gnavus-0.1515.49e-116.17e-10
genusDesulfovibrio0.156.22e-116.83e-10
speciesMethanobrevibacter_smithii0.157.53e-118.08e-10
phylumEuryarchaeota0.157.75e-118.13e-10
speciesEubacterium_siraeum0.158.15e-118.18e-10
classMethanobacteria0.1498.49e-118.18e-10
orderMethanobacteriales0.1498.49e-118.18e-10
familyMethanobacteriaceae0.1498.49e-118.18e-10
genusMethanobrevibacter0.1481.24e-101.17e-09
genusButyrivibrio0.1471.92e-101.77e-09
speciesAnaerotruncus_unclassified0.1461.95e-101.77e-09
speciesStreptococcus_salivarius0.1452.92e-102.6e-09
speciesSubdoligranulum_unclassified0.1418.69e-107.6e-09
speciesCoprococcus_sp_ART55_10.141.11e-099.52e-09
classDeltaproteobacteria0.141.17e-099.52e-09
orderDesulfovibrionales0.141.17e-099.52e-09
familyDesulfovibrionaceae0.141.17e-099.52e-09
speciesClostridium_clostridioforme-0.1391.65e-091.32e-08
speciesCoprococcus_eutactus0.1381.94e-091.53e-08
speciesEubacterium_ventriosum0.1372.79e-092.16e-08
genusSubdoligranulum0.1373.02e-092.3e-08
speciesLachnospiraceae_bacterium_1_1_57FAA0.1363.97e-092.97e-08
speciesRoseburia_intestinalis0.1321.09e-088.04e-08
speciesDesulfovibrio_piger0.1311.3e-089.44e-08
speciesPrevotella_copri0.1282.74e-081.96e-07
speciesAlistipes_shahii0.1282.85e-082.01e-07
speciesBacteroides_plebeius0.1273.18e-082.21e-07
classBacilli0.1273.32e-082.27e-07
speciesParabacteroides_goldsteinii0.1273.52e-082.36e-07
speciesRuminococcus_callidus0.1273.55e-082.36e-07
speciesEggerthella_unclassified-0.1264.45e-082.92e-07
genusEggerthella-0.1247.19e-084.65e-07
speciesParaprevotella_unclassified0.1248.32e-085.31e-07
speciesBlautia_producta-0.1239.32e-085.87e-07
genusParaprevotella0.1231.02e-076.29e-07
familyBacteroidales_noname0.1231.06e-076.29e-07
genusBacteroidales_noname0.1231.06e-076.29e-07
speciesBacteroidales_bacterium_ph80.1231.06e-076.29e-07
orderLactobacillales0.1221.08e-076.29e-07
speciesVeillonella_unclassified0.1221.08e-076.29e-07
familyStreptococcaceae0.1211.46e-078.4e-07
speciesBacteroides_coprocola0.121.81e-071.03e-06
speciesButyrivibrio_crossotus0.121.98e-071.11e-06
speciesBacteroides_salyersiae0.122.01e-071.12e-06
speciesLachnospiraceae_bacterium_1_4_56FAA-0.122.06e-071.13e-06
speciesEubacterium_biforme0.1192.25e-071.22e-06
genusStreptococcus0.1192.43e-071.3e-06
familyPrevotellaceae0.1192.49e-071.32e-06
speciesBilophila_wadsworthia0.1182.8e-071.47e-06
genusActinobacillus0.1183.04e-071.56e-06
speciesActinobacillus_unclassified0.1183.04e-071.56e-06
speciesClostridium_sp_L2_500.1173.68e-071.87e-06
speciesBacteroides_intestinalis0.1173.78e-071.9e-06
speciesPeptostreptococcaceae_noname_unclassified0.1173.9e-071.94e-06
speciesAlistipes_finegoldii0.1174.12e-072.03e-06
speciesAggregatibacter_segnis0.1164.57e-072.22e-06
genusMitsuokella0.1164.88e-072.35e-06
speciesBacteroides_massiliensis0.1165.14e-072.45e-06
genusBilophila0.1156.3e-072.97e-06
speciesBacteroides_ovatus-0.1147.09e-073.31e-06
genusOdoribacter0.1147.8e-073.61e-06
speciesCoprococcus_comes0.1148.44e-073.87e-06
familyPeptostreptococcaceae0.1131.06e-064.81e-06
speciesBilophila_unclassified0.1131.07e-064.81e-06
speciesOdoribacter_splanchnicus0.1121.23e-065.47e-06
genusPrevotella0.1121.24e-065.47e-06
speciesOscillibacter_sp_KLE_1728-0.1111.66e-067.25e-06
genusLachnospiraceae_noname0.111.8e-067.79e-06
genusVeillonella0.111.96e-068.41e-06
genusAnaerotruncus0.1082.97e-061.26e-05
speciesMitsuokella_unclassified0.1083.04e-061.28e-05
genusParabacteroides-0.1073.63e-061.5e-05
genusEnterobacter0.1073.65e-061.5e-05
speciesParaprevotella_xylaniphila0.1073.66e-061.5e-05
speciesMethanobrevibacter_unclassified0.1064.25e-061.73e-05
genusCoprobacillus-0.1064.51e-061.82e-05
speciesLachnospiraceae_bacterium_5_1_57FAA-0.1064.59e-061.84e-05
genusAdlercreutzia0.1055.63e-062.2e-05
speciesClostridium_ramosum-0.1055.63e-062.2e-05
speciesAdlercreutzia_equolifaciens0.1055.63e-062.2e-05
speciesEnterobacter_cloacae0.1046.24e-062.41e-05
speciesBacteroides_eggerthii0.1046.29e-062.41e-05
speciesDialister_invisus-0.1046.76e-062.57e-05
speciesParaprevotella_clara0.1046.97e-062.63e-05
speciesCoprobacillus_unclassified-0.1038.49e-063.18e-05
genusPeptostreptococcaceae_noname0.1038.6e-063.2e-05
genusButyricimonas0.1021.08e-053.95e-05
speciesButyricimonas_synergistica0.1021.08e-053.95e-05
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.1021.09e-053.96e-05
speciesEubacterium_ramulus0.11.36e-054.9e-05
speciesHaemophilus_sputorum0.11.42e-055.08e-05
genusKlebsiella0.0991.98e-057.03e-05
classGammaproteobacteria0.0982.07e-057.27e-05
speciesBlautia_hydrogenotrophica-0.0982.08e-057.27e-05
speciesVeillonella_dispar0.0982.11e-057.32e-05
speciesDorea_longicatena0.0944.34e-050.00015
speciesPrevotella_stercorea0.0944.5e-050.000154
speciesVeillonella_parvula0.0935.84e-050.000198
phylumProteobacteria0.0927.28e-050.000245
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0917.88e-050.000264
speciesAlistipes_putredinis0.0918.65e-050.000288
speciesEubacterium_dolichum-0.099.16e-050.000302
speciesLachnospiraceae_bacterium_3_1_46FAA0.0880.0001280.00042
speciesOlsenella_unclassified0.0880.000130.000423
speciesStreptococcus_parasanguinis0.0870.0001520.000491
speciesAlistipes_indistinctus0.0870.0001540.000494
speciesClostridium_perfringens0.0870.0001610.000513
speciesCampylobacter_concisus0.0870.0001670.000529
speciesEubacterium_hallii0.0870.0001760.000554
speciesDorea_formicigenerans0.0860.0001860.000581
genusOlsenella0.0860.0001990.000617
speciesEggerthella_lenta-0.0860.00020.000617
speciesDorea_unclassified-0.0850.0002210.000677
speciesLactobacillus_rhamnosus-0.0850.0002240.000682
speciesRoseburia_unclassified-0.0850.0002330.000705
speciesParabacteroides_unclassified-0.0840.0002770.000833
speciesRothia_mucilaginosa0.0840.0002930.000875
speciesKlebsiella_unclassified0.0830.0003090.000912
speciesRuminococcus_bromii0.0830.0003090.000912
speciesDialister_succinatiphilus0.0830.0003140.000921
speciesVeillonella_atypica0.0820.0003580.00104
speciesParabacteroides_johnsonii0.0820.000360.00104
speciesStreptococcus_australis0.0820.0003780.00109
speciesAnaerostipes_unclassified-0.080.0004990.00143
speciesCollinsella_unclassified-0.080.0005370.00153
orderEnterobacteriales0.080.0005450.00153
familyEnterobacteriaceae0.080.0005450.00153
speciesEscherichia_unclassified0.080.0005480.00153
speciesBacteroides_caccae0.0790.0005890.00164
genusCoprobacter0.0790.0006560.0018
speciesCoprobacter_fastidiosus0.0790.0006560.0018
genusDorea0.0780.0007150.00195
speciesBacteroides_oleiciplenus0.0780.0007670.00208
speciesKlebsiella_pneumoniae0.0780.0007780.0021
genusRothia0.0770.0009030.00242
speciesAlistipes_onderdonkii0.0770.0009120.00243
speciesBacteroides_faecis0.0760.0009420.0025
familyMicrococcaceae0.0760.0009890.00261
speciesBacteroides_coprophilus0.0750.00110.00288
genusParasutterella0.0750.001110.00288
speciesParasutterella_excrementihominis0.0750.001110.00288
speciesFusobacterium_mortiferum0.0750.001250.00322
speciesBacteroides_cellulosilyticus0.0740.001290.00331
genusHoldemania0.0740.001410.0036
speciesCitrobacter_freundii0.0720.00190.00482
genusCitrobacter0.0710.002060.0052
speciesCollinsella_aerofaciens0.070.002360.00593
speciesBacteroides_uniformis-0.070.002380.00594
genusFlavonifractor-0.070.002420.00598
speciesFlavonifractor_plautii-0.070.002420.00598
genusSutterellaceae_unclassified0.070.002530.00618
speciesEubacterium_sp_3_1_31-0.070.002530.00618
speciesWeissella_confusa0.070.002540.00618
genusDialister-0.070.002560.0062
speciesRuminococcus_champanellensis0.070.002590.00624
speciesBacteroides_clarus0.0690.0030.00719
genusRuminococcus0.0680.003060.00729
speciesBacteroides_finegoldii0.0680.003090.00732
speciesStreptococcus_anginosus0.0680.00310.00732
speciesBacteroides_pectinophilus0.0680.00320.00751
speciesEggerthella_sp_1_3_56FAA-0.0680.003350.00783
speciesClostridium_bartlettii0.0670.003740.0087
speciesClostridium_bolteae-0.0670.003930.00909
speciesLachnospiraceae_bacterium_6_1_63FAA-0.0660.004250.00974
classErysipelotrichia0.0660.004290.00974
orderErysipelotrichales0.0660.004290.00974
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speciesHoldemania_filiformis0.0520.0240.0455
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speciesLactococcus_lactis-0.0510.02670.05
familyPropionibacteriaceae-0.050.02920.0545
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speciesC2likevirus_unclassified-0.0470.04070.0717
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speciesLachnospiraceae_bacterium_2_1_58FAA-0.0460.04790.0822
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genusPyramidobacter0.0440.05920.0989
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speciesParabacteroides_merdae0.0430.06260.104
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speciesBurkholderiales_bacterium_1_1_470.0430.06390.105
familyBurkholderiales_noname0.0420.06660.109
familyLeuconostocaceae0.0420.06680.109
speciesPeptostreptococcus_stomatis0.0420.06950.113
speciesStreptococcus_infantarius0.0420.06960.113
speciesLactobacillus_delbrueckii-0.0410.07360.119
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speciesLactobacillus_amylovorus-0.040.08070.13
speciesBacteroides_salanitronis-0.040.08350.134
genusPantoea-0.040.08450.134
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speciesClostridium_leptum-0.0390.08870.14
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speciesFusobacterium_varium-0.0390.090.142
speciesBacteroides_stercoris0.0380.1020.16
speciesWeissella_cibaria0.0380.1030.161
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0370.1130.176
classBetaproteobacteria0.0360.1190.185
speciesSutterella_parvirubra0.0360.120.186
genusTuricibacter0.0360.1220.188
genusLactococcus-0.0350.1270.195
speciesParabacteroides_sp_20_30.0350.1310.199
speciesBifidobacterium_catenulatum-0.0350.1310.199
speciesBifidobacterium_longum-0.0350.1310.199
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speciesRuminococcus_torques0.0340.1410.213
orderCoriobacteriales0.0340.1420.213
familyCoriobacteriaceae0.0340.1420.213
speciesFusobacterium_ulcerans-0.0340.1420.213
speciesMegasphaera_micronuciformis0.0340.1460.218
speciesTuricibacter_unclassified0.0340.1470.218
speciesLactobacillus_mucosae0.0340.1470.218
genusLambdalikevirus0.0330.1520.225
speciesMegasphaera_elsdenii0.0330.1530.226
genusMegasphaera0.0330.1550.228
orderBurkholderiales0.0320.160.235
speciesBacteroides_fragilis-0.0320.1640.24
familySiphoviridae-0.0310.1770.258
speciesAnaerotruncus_colihominis-0.0310.1810.263
speciesClostridium_spiroforme-0.0310.1820.264
familyClostridiales_noname-0.0310.1830.264
familyViruses_noname0.030.1910.274
genusViruses_noname0.030.1910.274
speciesBacteroides_vulgatus-0.0290.2080.298
speciesEubacterium_rectale0.0290.2110.301
speciesLactobacillus_gasseri-0.0280.220.313
speciesEubacterium_limosum-0.0280.2230.316
speciesStreptococcus_sanguinis0.0280.2240.317
speciesStreptococcus_gordonii0.0280.2320.327
speciesStreptococcus_lutetiensis0.0270.2360.331
speciesAlistipes_sp_HGB5-0.0270.2360.331
familyAcidaminococcaceae0.0270.2510.351
speciesEnterobacteria_phage_HK5440.0260.2580.359
genusBifidobacterium-0.0260.2640.366
speciesTuricibacter_sanguinis0.0260.2650.367
orderBifidobacteriales-0.0250.2750.377
familyBifidobacteriaceae-0.0250.2750.377
speciesLeuconostoc_lactis0.0250.2750.377
speciesBacteroides_sp_3_1_190.0250.2780.38
speciesOscillibacter_unclassified-0.0250.2810.383
speciesBacteroides_fluxus0.0250.2820.383
genusSolobacterium0.0250.2830.383
speciesSolobacterium_moorei0.0250.2830.383
speciesErysipelotrichaceae_bacterium_21_3-0.0240.3040.41
speciesBacteroides_xylanisolvens-0.0230.3210.432
genusAcidaminococcaceae_unclassified-0.0230.3220.432
speciesClostridium_sp_KLE_1755-0.0220.3340.447
speciesBifidobacterium_dentium0.0220.3350.447
speciesPrevotella_bivia-0.0220.3410.453
genusPseudoflavonifractor0.0220.3470.459
speciesPseudoflavonifractor_capillosus0.0220.3470.459
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speciesAnaerostipes_hadrus0.0220.350.46
speciesEnterobacter_aerogenes0.0210.3630.476
genusMorganella-0.0210.3670.479
speciesMorganella_morganii-0.0210.3670.479
speciesBacteroides_sp_4_3_47FAA-0.0210.370.48
genusRuminococcaceae_noname0.0210.3710.48
speciesRuminococcaceae_bacterium_D160.0210.3710.48
speciesLactobacillus_oris0.020.3760.484
speciesOscillibacter_sp_KLE_1745-0.020.3760.484
speciesParabacteroides_sp_D130.020.3780.485
familyStaphylococcaceae0.020.3790.485
speciesEnterococcus_faecalis0.020.3810.486
familyBacillales_noname0.020.3970.504
genusGemella0.020.3970.504
familyEnterococcaceae0.020.3990.505
genusEnterococcus0.0190.4050.511
speciesCollinsella_tanakaei-0.0190.4070.511
speciesLactococcus_phage_936_sensu_lato0.0190.4070.511
genusActinomyces0.0190.4120.516
speciesBacteroides_sp_2_1_22-0.0190.4160.519
genusStaphylococcus0.0190.4220.526
familyActinomycetaceae0.0180.4250.528
familyOscillospiraceae-0.0180.4330.535
genusOscillibacter-0.0180.4330.535
genusPeptoniphilus0.0180.4350.536
genusProteus0.0180.4380.538
speciesLactobacillus_salivarius0.0180.4460.547
familyMyoviridae0.0170.4540.555
speciesLactobacillus_casei_paracasei-0.0170.4570.556
speciesLactococcus_phage_bIL67-0.0170.4570.556
speciesCollinsella_intestinalis0.0160.4830.586
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0160.4860.588
genusSutterella0.0160.5010.605
speciesHoldemania_sp_AP2-0.0150.5090.613
genusClostridiales_noname-0.0150.5210.624
speciesPropionibacterium_freudenreichii0.0150.5210.624
genusMyoviridae_noname0.0150.5290.632
speciesProteus_mirabilis0.0150.5310.633
genusParvimonas-0.0140.5440.647
speciesParvimonas_unclassified-0.0140.5460.648
speciesCoprobacillus_sp_29_1-0.0140.5490.649
speciesLactococcus_phage_jm20.0140.550.649
phylumViruses_noname-0.0130.560.656
classViruses_noname-0.0130.560.656
speciesAlistipes_sp_AP110.0130.560.656
speciesClostridium_citroniae-0.0130.5670.662
speciesBifidobacterium_angulatum0.0130.5770.672
speciesLactobacillus_crispatus-0.0130.5790.673
speciesStreptococcus_phage_Sfi210.0130.5810.673
speciesLactobacillus_sanfranciscensis0.0130.5830.673
speciesOdoribacter_unclassified-0.0130.5830.673
familyClostridiaceae0.0120.6010.691
genusAcidaminococcus-0.0120.6030.691
speciesStreptococcus_mitis_oralis_pneumoniae0.0120.6040.691
speciesOdoribacter_laneus-0.0120.6050.691
speciesBacteroides_thetaiotaomicron-0.0120.6070.692
speciesEnterococcus_faecium0.0110.630.717
genusClostridium0.0110.6330.718
speciesLactobacillus_reuteri0.0110.6350.718
speciesCoprobacillus_sp_D6-0.0110.6360.718
speciesParabacteroides_distasonis-0.0110.6410.721
genusPropionibacterium-0.0110.6420.721
speciesStreptococcus_pasteurianus-0.0110.6450.723
speciesBacteroides_barnesiae0.0110.6460.723
speciesLachnospiraceae_bacterium_8_1_57FAA0.010.670.748
speciesPorphyromonas_asaccharolytica-0.010.6760.749
speciesBifidobacterium_adolescentis0.010.6770.749
genusCatenibacterium0.010.6780.749
speciesCatenibacterium_mitsuokai0.010.6780.749
speciesSutterella_wadsworthensis0.010.6810.751
speciesClostridium_hathewayi-0.0090.6990.769
genusLactobacillus0.0090.7010.769
familyLactobacillaceae0.0090.7020.769
speciesRuminococcus_sp_JC3040.0090.7090.775
genusBlautia0.0080.7380.804
speciesCoriobacteriaceae_bacterium_phI-0.0080.740.805
speciesLactococcus_phage_phi7-0.0080.7440.807
speciesBifidobacterium_animalis0.0080.7460.808
speciesStreptococcus_thermophilus0.0070.7490.809
speciesMegasphaera_unclassified0.0070.7510.809
speciesKlebsiella_sp_MS_92_3-0.0070.7530.809
speciesAcidaminococcus_intestini-0.0070.7540.809
speciesEubacterium_cylindroides0.0070.7630.817
familySuccinivibrionaceae0.0070.7670.819
familyPodoviridae0.0070.7740.825
speciesRuminococcus_sp_5_1_39BFAA0.0070.7760.825
speciesLactobacillus_vaginalis-0.0060.7820.829
genusAnaerostipes-0.0060.7860.832
speciesClostridium_asparagiforme0.0060.7930.837
genusSlackia-0.0060.8050.847
speciesStreptococcus_mutans0.0060.8060.847
speciesClostridium_nexile-0.0060.8110.848
speciesLactococcus_garvieae0.0060.8120.848
speciesSlackia_piriformis0.0060.8120.848
speciesLactobacillus_plantarum-0.0050.8180.851
speciesLachnospiraceae_bacterium_7_1_58FAA0.0050.8190.851
genusSiphoviridae_noname-0.0050.820.851
genusPorphyromonas0.0050.8260.855
speciesLactobacillus_fermentum-0.0050.8440.872
speciesGemella_morbillorum-0.0040.8690.896
genusSuccinatimonas0.0030.8820.905
speciesSuccinatimonas_hippei0.0030.8820.905
genusCoriobacteriaceae_noname-0.0030.8860.907
speciesPeptostreptococcus_anaerobius0.0030.8950.914
genusGordonibacter-0.0030.9040.92
speciesGordonibacter_pamelaeae-0.0030.9040.92
speciesPorphyromonas_uenonis0.0020.9290.943
phylumActinobacteria-0.0010.9490.959
classActinobacteria-0.0010.9490.959
orderViruses_noname-0.0010.9650.973
speciesLactococcus_phage_P680-0.0010.9760.982
familyClostridiales_Family_XI_Incertae_Sedis0.00.9950.999
speciesLachnospiraceae_bacterium_2_1_46FAA0.00.9970.999
genusLeuconostoc0.00.9990.999
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.02575376631920.04670520843030.008419622851776425.8155
Rheumatoid arthritisChina127980.0474366015860.06596898967310.116229254182594019.8086
Liver cirrhosisChina1201140.05406714618540.06242035071830.1297366238171750358.7961
Type II diabetesSweden53920.03770903849250.0402432880260.171598604501595520.1659
Type II diabetesChina1831850.05344520222020.0492647571210.2635742992721513150.005
ObesityDenmark1691230.04163009389880.04360280027070.3272679940441477548.5844
Ulcerative colitisSpain78660.04439810083330.04670520843030.6214790163122206372.7816
Colorectal cancerAustria64350.03710845639560.03588464412970.6264495680262099871.0448
Type II diabetesDenmark752770.04219384540220.04243023812050.66075699022404778.8245
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382