MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:12:34 PST
Job id & description: 2398, purine18
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
NLM004_GL00458993759087CompleteK05810COG1496ProteobacteriaHaemophilus100.0100.0100.0
MH0425_GL00366213752673CompleteK05810COG1496ProteobacteriaHaemophilus100.0100.0100.0
SZEY-22A_GL00203213759946CompleteK05810COG1496ProteobacteriaHaemophilus100.0100.0100.0
862965.PARA_015203763023CompleteK05810COG1496ProteobacteriaHaemophilus100.0100.0100.0
888828.HMPREF9417_06943763345CompleteK05810COG1496ProteobacteriaHaemophilus100.0100.0100.0
MH0234_GL01606503748533CompleteK05810COG1496ProteobacteriaHaemophilus100.0100.0100.0
MH0341_GL01025013769452Lack 3'-endK05810COG1496ProteobacteriaHaemophilus100.0100.0100.0
N032A_GL00197733759672CompleteK05810COG1496ProteobacteriaHaemophilus100.0100.0100.0
T2D-14A_GL01125453760462CompleteK05810COG1496ProteobacteriaHaemophilus100.0100.0100.0
MH0079_GL00539143745410CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-107A_GL01615463760144CompleteK03784COG0813FirmicutesEubacterium100.0100.0100.0
MH0028_GL00744363744760CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0345_GL01359033769541Lack 3'-endK05810COG1496unknownunknown100.0100.0100.0
SZEY-79A_GL00749243760078Lack 5'-endK03784COG0813Firmicutesunknown100.0100.0100.0
160502038-stool1_revised3762105Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
706437.HMPREF0813_012963744072CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
MH0035_GL00367363782985CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0043_GL00489653764152CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0402_GL01351793752099CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0413_GL00379193752361Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0420_GL01454113752572CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC47-0_GL01101353773720Lack both endsK03784COG0813unknownunknown100.0100.0100.0
V1.CD3-0-PT_GL00384893794015CompleteK05810COG1496ProteobacteriaProteus100.0100.0100.0
V1.FI20_GL00821553775901Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
V1.UC39-4_GL01237363776862CompleteK05810COG1496ProteobacteriaProvidencia100.0100.0100.0
469595.CSAG_023863801386CompleteK05810COG1496ProteobacteriaCitrobacter100.0100.0100.0
469608.HMPREF0485_026793801390CompleteK05810COG1496ProteobacteriaKlebsiella100.0100.0100.0
763982056-stool1_revised3781436CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0009_GL00390923782566CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0040_GL00842343783065CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0457_GL03025613753573Lack 5'-endK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
300268.SBO_26283801184CompleteK05810COG1496ProteobacteriaShigella100.0100.0100.0
483218.BACPEC_000503782121CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0008_GL00160753782546CompleteK05810COG1496ProteobacteriaKlebsiella100.0100.0100.0
MH0014_GL00472053782773CompleteK05810COG1496ProteobacteriaEscherichia100.0100.0100.0
MH0126_GL01127743784471CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0272_GL01205333787322CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0318_GL00269143768976CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0362_GL00126493769911CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
O2.UC17-1_GL00548443772858Lack 5'-endK03784COG0813FirmicutesStreptococcus100.0100.0100.0
T2D-108A_GL01866523798355CompleteK05810COG1496ProteobacteriaEnterobacter100.0100.0100.0
1006551.KOX_000103801117CompleteK05810COG1496ProteobacteriaKlebsiella100.0100.0100.0
469613.HMPREF0864_031653782100CompleteK05810COG1496Proteobacteriaunknown100.0100.0100.0
656420.ERJG_046763801514CompleteK05810COG1496ProteobacteriaEscherichia100.0100.0100.0
MH0006_GL01597643801832CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0053_GL00456303764285CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0054_GL00167853802585CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0193_GL00190403785767CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0456_GL01533413772407CompleteK03784COG0813unknownunknown100.0100.0100.0
NLM027_GL00233443797332CompleteK05810COG1496ProteobacteriaEnterobacter100.0100.0100.0
O2.CD2-0_GL00234523772515CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC8-1_GL00606213755487CompleteK03784COG0813unknownunknown100.0100.0100.0
SZEY-68A_GL00383573798229CompleteK05810COG1496ProteobacteriaEnterobacter100.0100.0100.0
159814214-stool2_revised3780888Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
716541.ECL_039253801251CompleteK05810COG1496ProteobacteriaEnterobacter100.0100.0100.0
BGI-06A_GL00709933778312CompleteK03784COG0813unknownunknown100.0100.0100.0
DOM005_GL00431853797052CompleteK05810COG1496ProteobacteriaEnterobacter100.0100.0100.0
MH0006_GL00670703801783CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0150_GL00880663785010CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0189_GL00867243804991CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0217_GL01459023786268CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0227_GL01061883786394CompleteK00772COG0005unknownunknown100.0100.0100.0
MH0277_GL00004813787459CompleteK05810COG1496ProteobacteriaKlebsiella100.0100.0100.0
MH0369_GL01534393770084Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
NOF009_GL00164203797414CompleteK03784COG0813FusobacteriaFusobacterium100.0100.0100.0
SZEY-40A_GL00504373798177CompleteK05810COG1496ProteobacteriaEnterobacter100.0100.0100.0
T2D-11A_GL00914453779134CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
V1.CD37-4_GL00881653774873CompleteK03784COG0813unknownunknown100.0100.0100.0
1045856.EcWSU1_034023801136CompleteK05810COG1496ProteobacteriaEnterobacter100.0100.0100.0
706433.HMPREF9430_006623763296CompleteK00757COG2820FirmicutesSolobacterium100.0100.0100.0
MH0141_GL00534273746574CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0198_GL00048693766882CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0260_GL00074853787017CompleteK05810COG1496ProteobacteriaKlebsiella100.0100.0100.0
MH0409_GL00929423790354CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.CD3-0-PT_GL01755253772597Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
T2D-11A_GL00570753741072Lack 3'-endK03783COG0005unknownunknown100.0100.0100.0
V1.CD46-0_GL00643443775023Lack 5'-endK03784COG0813Firmicutesunknown100.0100.0100.0
V1.FI09_GL01592553794754Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
V1.UC40-0_GL01034953758011CompleteK03784COG0813unknownunknown100.0100.0100.0
290338.CKO_039153801179CompleteK05810COG1496ProteobacteriaCitrobacter100.0100.0100.0
MH0030_GL00310133744781CompleteK00757COG2820unknownunknown100.0100.0100.0
MH0053_GL00392693745060Lack both endsK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0407_GL01624373790305Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0416_GL02296643771357Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
T2D-206A_GL00550763780221Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0435_GL00324273791087Lack 5'-endK03783COG0005Bacteroidetesunknown100.0100.0100.0
N037A_GL01013103797885Lack 3'-endK03783COG0005unknownunknown100.0100.0100.0
469613.HMPREF0864_029633782099CompleteK03784COG0813Proteobacteriaunknown100.0100.0100.0
DOF004_GL00332293739670CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0028_GL00823723802264CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
NLF013_GL00474603777976CompleteK00757COG2820FirmicutesRoseburia100.0100.0100.0
706434.HMPREF9429_003323763303CompleteK00757COG2820FirmicutesMegasphaera100.0100.0100.0
MH0069_GL00145093783420CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0077_GL00273853783491CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0144_GL01252253746713CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0141_GL01266283784777CompleteK03784COG0813unknownunknown100.0100.0100.0
SZEY-81A_GL00166173778946CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0033_GL00169263802306CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0428_GL01853903771592Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
457396.CSBG_018393763097CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
phylumBacteroidetes-0.4375.7e-889.19e-86
classBacteroidia-0.4375.84e-889.19e-86
orderBacteroidales-0.4375.84e-889.19e-86
classGammaproteobacteria0.3731.03e-621.22e-60
orderEnterobacteriales0.3611.4e-581.1e-56
familyEnterobacteriaceae0.3611.4e-581.1e-56
phylumProteobacteria0.3331.56e-491.05e-47
genusEscherichia0.3183.02e-451.78e-43
genusPantoea0.3161.4e-446.61e-43
speciesPantoea_unclassified0.3161.4e-446.61e-43
familyBacteroidaceae-0.3121.24e-434.88e-42
genusBacteroides-0.3121.24e-434.88e-42
phylumFirmicutes0.3091.58e-425.74e-41
familyRuminococcaceae0.3081.9e-426.41e-41
classClostridia0.3082.49e-427.35e-41
orderClostridiales0.3082.49e-427.35e-41
speciesEscherichia_coli0.3035.14e-411.43e-39
speciesRuminococcus_obeum0.2531.02e-282.67e-27
orderLactobacillales0.2531.22e-283.03e-27
classBacilli0.2521.82e-284.3e-27
speciesEscherichia_unclassified0.2431.91e-264.29e-25
genusFaecalibacterium0.246.08e-261.25e-24
speciesFaecalibacterium_prausnitzii0.246.08e-261.25e-24
speciesCoprococcus_catus0.2391.01e-251.99e-24
genusCoprococcus0.2381.81e-253.42e-24
genusKlebsiella0.2232.08e-223.78e-21
familyStreptococcaceae0.2213.46e-226.05e-21
genusParabacteroides-0.2198.42e-221.42e-20
familyLachnospiraceae0.2181.65e-212.69e-20
genusStreptococcus0.2122.26e-203.56e-19
speciesKlebsiella_pneumoniae0.2021.33e-182.03e-17
speciesDorea_formicigenerans0.22.82e-184.16e-17
genusRuminococcus0.1993.69e-185.28e-17
genusDorea0.1984.89e-186.79e-17
speciesStreptococcus_salivarius0.1933.27e-174.41e-16
speciesSubdoligranulum_unclassified0.1934.45e-175.83e-16
classMethanobacteria0.1882.17e-162.56e-15
orderMethanobacteriales0.1882.17e-162.56e-15
familyMethanobacteriaceae0.1882.17e-162.56e-15
speciesEnterobacter_cloacae0.1882.17e-162.56e-15
genusMethanobrevibacter0.1882.22e-162.56e-15
genusSubdoligranulum0.1882.63e-162.96e-15
familyPorphyromonadaceae-0.1865.8e-166.37e-15
speciesDorea_longicatena0.1865.94e-166.37e-15
phylumEuryarchaeota0.1841.11e-151.16e-14
speciesBacteroides_ovatus-0.1841.22e-151.25e-14
genusEnterobacter0.1831.77e-151.78e-14
speciesMethanobrevibacter_smithii0.1822.2e-152.16e-14
speciesEubacterium_hallii0.1796.94e-156.69e-14
speciesCoprococcus_comes0.1771.16e-141.1e-13
phylumActinobacteria0.1762.08e-141.89e-13
classActinobacteria0.1762.08e-141.89e-13
speciesKlebsiella_oxytoca0.1734.27e-143.8e-13
speciesRuminococcus_bromii0.171.57e-131.37e-12
genusEnterococcus0.1683.09e-132.65e-12
familyEnterococcaceae0.1673.2e-132.7e-12
familyPeptostreptococcaceae0.1648.81e-137.3e-12
speciesStreptococcus_parasanguinis0.1641.04e-128.46e-12
orderActinomycetales0.1612.81e-122.25e-11
speciesEubacterium_eligens0.1586.15e-124.84e-11
familyEubacteriaceae0.1587.29e-125.58e-11
genusEubacterium0.1587.33e-125.58e-11
orderBifidobacteriales0.1577.89e-125.82e-11
familyBifidobacteriaceae0.1577.89e-125.82e-11
genusBifidobacterium0.1561.23e-118.93e-11
familyLactobacillaceae0.1541.92e-111.37e-10
genusPeptostreptococcaceae_noname0.1542.27e-111.6e-10
familyBacillales_noname0.1533.33e-112.28e-10
genusGemella0.1533.33e-112.28e-10
orderCoriobacteriales0.1523.83e-112.55e-10
familyCoriobacteriaceae0.1523.83e-112.55e-10
genusLactobacillus0.156.32e-114.14e-10
speciesBacteroides_uniformis-0.1491.01e-106.53e-10
familyActinomycetaceae0.1481.1e-107.02e-10
familyOscillospiraceae-0.1481.13e-107.02e-10
genusOscillibacter-0.1481.13e-107.02e-10
speciesEubacterium_ramulus0.1481.23e-107.54e-10
genusAdlercreutzia0.1471.83e-101.09e-09
speciesAdlercreutzia_equolifaciens0.1471.83e-101.09e-09
speciesBifidobacterium_longum0.1453.04e-101.79e-09
genusActinomyces0.1453.26e-101.9e-09
speciesCollinsella_aerofaciens0.1443.51e-102.02e-09
speciesOscillibacter_unclassified-0.1443.9e-102.22e-09
genusBlautia0.1427.47e-104.2e-09
speciesRuminococcus_sp_5_1_39BFAA0.1418.69e-104.83e-09
speciesRothia_mucilaginosa0.1419.01e-104.95e-09
speciesBacteroides_vulgatus-0.1411.02e-095.53e-09
genusRothia0.141.24e-096.65e-09
familyMicrococcaceae0.141.3e-096.89e-09
classErysipelotrichia0.141.35e-096.93e-09
orderErysipelotrichales0.141.35e-096.93e-09
familyErysipelotrichaceae0.141.35e-096.93e-09
orderBacillales0.1391.73e-098.78e-09
familyLeuconostocaceae0.1381.89e-099.49e-09
speciesClostridium_perfringens0.1381.98e-099.84e-09
speciesEnterococcus_faecium0.1382.34e-091.15e-08
speciesRuminococcus_lactaris0.1345.47e-092.66e-08
speciesCitrobacter_unclassified0.1345.64e-092.72e-08
speciesOlsenella_unclassified0.1345.87e-092.8e-08
speciesCoprococcus_eutactus0.1346.77e-093.2e-08
genusCitrobacter0.1337.78e-093.64e-08
speciesEubacterium_ventriosum0.1329.68e-094.48e-08
speciesEnterococcus_faecalis0.1311.19e-085.45e-08
speciesCitrobacter_freundii0.1311.4e-086.35e-08
speciesWeissella_confusa0.131.48e-086.65e-08
genusSolobacterium0.1273.21e-081.42e-07
speciesSolobacterium_moorei0.1273.21e-081.42e-07
genusFlavonifractor-0.1273.34e-081.45e-07
speciesFlavonifractor_plautii-0.1273.34e-081.45e-07
genusOlsenella0.1273.67e-081.57e-07
genusWeissella0.1264.54e-081.93e-07
speciesStreptococcus_gordonii0.1264.67e-081.97e-07
speciesClostridium_clostridioforme-0.1265.12e-082.14e-07
speciesAnaerotruncus_unclassified0.1255.26e-082.18e-07
speciesMethanobrevibacter_unclassified0.1247.49e-083.07e-07
speciesStreptococcus_anginosus0.1238.78e-083.57e-07
speciesLactococcus_garvieae0.1239.62e-083.88e-07
speciesBacteroides_thetaiotaomicron-0.1231.06e-074.24e-07
speciesCoprococcus_sp_ART55_10.1221.08e-074.28e-07
speciesStreptococcus_australis0.1211.38e-075.43e-07
speciesAnaerostipes_hadrus0.121.78e-076.94e-07
speciesBifidobacterium_dentium0.1192.25e-078.7e-07
speciesKlebsiella_sp_MS_92_30.1192.38e-079.13e-07
speciesRoseburia_hominis0.1182.92e-071.11e-06
genusAggregatibacter0.1183.06e-071.16e-06
speciesStreptococcus_vestibularis0.1173.99e-071.49e-06
speciesEubacterium_siraeum0.1174.11e-071.53e-06
speciesOscillibacter_sp_KLE_1728-0.1174.28e-071.58e-06
speciesBifidobacterium_adolescentis0.1164.53e-071.66e-06
genusCollinsella0.1165.48e-071.99e-06
speciesRuminococcus_callidus0.1155.78e-072.08e-06
speciesMegasphaera_micronuciformis0.1147.2e-072.57e-06
speciesStreptococcus_sanguinis0.1147.69e-072.73e-06
orderBurkholderiales-0.1121.12e-063.95e-06
speciesLachnospiraceae_bacterium_6_1_63FAA-0.1111.4e-064.89e-06
speciesBacteroides_xylanisolvens-0.1111.51e-065.24e-06
speciesVeillonella_parvula0.1111.54e-065.31e-06
speciesClostridium_bartlettii0.1111.65e-065.64e-06
genusLachnospiraceae_noname0.112.01e-066.83e-06
speciesStreptococcus_mitis_oralis_pneumoniae0.1092.36e-067.96e-06
classBetaproteobacteria-0.1092.47e-068.27e-06
speciesVeillonella_unclassified0.1092.5e-068.31e-06
speciesHaemophilus_sputorum0.1082.68e-068.85e-06
genusActinobacillus0.1082.76e-068.98e-06
speciesActinobacillus_unclassified0.1082.76e-068.98e-06
familyOxalobacteraceae0.1073.4e-061.1e-05
genusOxalobacter0.1073.53e-061.13e-05
speciesOxalobacter_formigenes0.1073.53e-061.13e-05
genusVeillonella0.1073.89e-061.23e-05
genusErysipelotrichaceae_noname0.1063.94e-061.24e-05
speciesRuminococcus_gnavus-0.1064.09e-061.28e-05
speciesClostridium_sp_L2_500.1055.33e-061.66e-05
familySutterellaceae-0.1046.44e-061.99e-05
speciesBacteroides_pectinophilus0.1046.96e-062.13e-05
speciesAggregatibacter_segnis0.1037.4e-062.25e-05
genusAnaerostipes0.1037.62e-062.31e-05
speciesRuminococcus_torques0.1037.94e-062.39e-05
speciesLachnospiraceae_bacterium_5_1_63FAA0.1011.32e-053.94e-05
phylumVerrucomicrobia0.0991.91e-055.5e-05
classVerrucomicrobiae0.0991.91e-055.5e-05
orderVerrucomicrobiales0.0991.91e-055.5e-05
familyVerrucomicrobiaceae0.0991.91e-055.5e-05
genusAkkermansia0.0991.91e-055.5e-05
speciesAkkermansia_muciniphila0.0991.91e-055.5e-05
familyRikenellaceae-0.0982.19e-056.23e-05
genusAlistipes-0.0982.19e-056.23e-05
speciesEubacterium_biforme0.0972.52e-057.12e-05
speciesKlebsiella_unclassified0.0972.75e-057.73e-05
speciesStreptococcus_thermophilus0.0972.78e-057.76e-05
speciesTuricibacter_sanguinis0.0972.86e-057.94e-05
genusCampylobacter0.0963.34e-059.22e-05
genusAnaerotruncus0.0954.01e-050.00011
familyCampylobacteraceae0.0954.19e-050.000114
speciesDialister_succinatiphilus0.0944.33e-050.000117
speciesCampylobacter_concisus0.0944.36e-050.000118
speciesOscillibacter_sp_KLE_1745-0.0944.48e-050.00012
speciesAcidaminococcus_unclassified-0.0944.84e-050.000129
speciesLachnospiraceae_bacterium_1_4_56FAA-0.0935.44e-050.000144
speciesStreptococcus_mutans0.0935.9e-050.000156
speciesClostridiales_bacterium_1_7_47FAA-0.0935.99e-050.000157
genusButyrivibrio0.0926.58e-050.000172
speciesPeptostreptococcaceae_noname_unclassified0.0927e-050.000182
speciesBacteroides_stercoris-0.0927.1e-050.000183
speciesFusobacterium_nucleatum0.0927.25e-050.000186
speciesDorea_unclassified-0.0917.87e-050.000201
speciesClostridium_sp_KLE_1755-0.099.69e-050.000246
speciesLactobacillus_plantarum0.090.0001060.000268
speciesStreptococcus_infantarius0.0890.0001080.000271
speciesVeillonella_dispar0.0890.0001110.000277
speciesWeissella_cibaria0.0890.0001140.000283
speciesClostridium_citroniae-0.0880.0001450.000358
speciesAlistipes_senegalensis0.0880.000150.000369
classEpsilonproteobacteria0.0870.0001560.00038
orderCampylobacterales0.0870.0001560.00038
speciesButyrivibrio_crossotus0.0870.0001610.00039
speciesBlautia_producta-0.0860.00020.000482
speciesEubacterium_rectale0.0860.0002030.000486
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speciesTuricibacter_unclassified0.0620.007630.0145
speciesCollinsella_unclassified-0.0610.008630.0163
genusCatenibacterium0.060.009480.0178
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speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.060.01010.0188
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genusBacteroidales_noname0.0590.01080.0198
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speciesOdoribacter_laneus0.0570.01440.026
speciesOdoribacter_unclassified-0.0560.01470.0264
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speciesLachnospiraceae_bacterium_3_1_46FAA0.0560.01480.0265
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speciesBacteroides_fluxus-0.0560.01580.0279
speciesMorganella_morganii0.0560.01580.0279
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speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0550.01670.0292
speciesLactococcus_lactis0.0530.02090.0364
speciesRuminococcus_sp_JC3040.0530.02110.0366
speciesLactococcus_phage_P6800.0530.0230.0398
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speciesPrevotella_buccae0.0510.02610.0445
genusCoprobacter0.0510.02670.0452
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familyMyoviridae0.050.03110.0521
speciesAnaerostipes_unclassified-0.050.03140.0524
speciesLachnospiraceae_bacterium_5_1_57FAA-0.050.03180.0529
speciesDesulfovibrio_piger0.0490.03240.0537
familyViruses_noname0.0490.03530.0581
genusViruses_noname0.0490.03530.0581
speciesParabacteroides_unclassified-0.0480.03660.06
speciesLactobacillus_crispatus0.0480.03820.0622
speciesClostridium_sp_ATCC_BAA_442-0.0480.03820.0622
genusOdoribacter-0.0480.03860.0626
speciesBacteroides_coprophilus0.0480.03890.0628
speciesMegamonas_rupellensis-0.0480.0390.0628
speciesLactococcus_phage_jm20.0470.04010.0644
speciesAlistipes_putredinis-0.0460.04610.0738
familyClostridiales_Family_XI_Incertae_Sedis0.0460.04730.0754
genusTunalikevirus0.0460.04910.078
genusPseudoflavonifractor0.0450.05020.0792
speciesPseudoflavonifractor_capillosus0.0450.05020.0792
speciesBacteroides_sp_2_1_22-0.0450.05250.0826
genusPorphyromonas0.0450.05290.0828
speciesStreptococcus_lutetiensis0.0450.0530.0828
genusParvimonas0.0440.05530.0861
speciesParvimonas_unclassified0.0440.05560.0863
speciesBifidobacterium_animalis0.0440.05690.0881
speciesBacteroides_sp_1_1_6-0.0430.06150.0946
speciesRoseburia_intestinalis0.0430.06150.0946
speciesPropionibacterium_freudenreichii0.0430.06290.0964
speciesBacteroides_clarus-0.0420.06710.102
genusBarnesiella0.0420.06840.104
speciesBarnesiella_intestinihominis0.0420.06840.104
speciesBacteroides_finegoldii-0.0420.06960.105
familyVeillonellaceae0.0410.07390.111
speciesLactobacillus_amylovorus0.0410.07410.111
speciesErysipelotrichaceae_bacterium_21_30.0410.07430.111
genusHoldemania0.0410.07460.111
speciesAlistipes_onderdonkii-0.0410.07480.111
speciesHoldemania_unclassified0.0410.07520.111
speciesProteus_mirabilis0.0410.07540.111
speciesAlistipes_sp_HGB5-0.0410.07620.111
phylumSynergistetes0.0410.07630.111
classSynergistia0.0410.07630.111
orderSynergistales0.0410.07630.111
familySynergistaceae0.0410.07630.111
speciesBacteroides_dorei-0.0410.07730.112
speciesMitsuokella_multacida0.0410.07980.116
genusSutterellaceae_unclassified-0.040.08080.117
speciesKlebsiella_phage_KP360.040.08340.12
speciesErysipelotrichaceae_bacterium_2_2_44A-0.0390.09180.132
speciesBacteroides_intestinalis0.0390.09230.132
speciesAcidaminococcus_fermentans0.0390.09280.132
genusPhascolarctobacterium0.0390.0960.136
speciesPhascolarctobacterium_succinatutens0.0390.0960.136
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0380.09690.137
speciesLactococcus_phage_phi70.0380.0980.138
speciesBifidobacterium_catenulatum0.0380.1030.145
speciesLactobacillus_rhamnosus0.0380.1050.147
speciesPorphyromonas_asaccharolytica0.0370.1080.151
speciesLactobacillus_ruminis0.0360.1150.16
genusLambdalikevirus0.0360.1210.168
orderAeromonadales0.0350.1290.179
speciesParabacteroides_distasonis-0.0350.1330.184
genusCoriobacteriaceae_noname-0.0340.1410.194
speciesDialister_invisus0.0340.1440.198
familyClostridiaceae0.0340.1450.198
genusClostridium0.0340.1460.199
speciesCoriobacteriaceae_bacterium_phI-0.0340.1470.2
speciesMegasphaera_unclassified-0.0330.1550.21
speciesParabacteroides_johnsonii-0.0330.1570.212
genusPyramidobacter0.0320.1680.225
speciesStreptococcus_pasteurianus-0.0320.1680.225
speciesPyramidobacter_piscolens0.0320.1680.225
genusAcidaminococcus-0.0320.170.227
genusClostridiales_noname-0.0310.1810.241
speciesCoprobacillus_unclassified-0.0310.1820.242
speciesAlistipes_sp_AP11-0.030.1990.264
speciesClostridium_nexile-0.030.2010.265
speciesBacteroides_caccae-0.030.2010.265
speciesMegamonas_hypermegale-0.0290.2070.272
speciesBacteroides_faecis-0.0290.2090.274
genusMegasphaera0.0290.2150.281
speciesParabacteroides_goldsteinii-0.0280.2180.284
speciesBifidobacterium_bifidum0.0280.2240.291
genusSutterella-0.0280.230.298
speciesBacteroides_coprocola0.0270.2370.306
speciesErysipelotrichaceae_bacterium_3_1_53-0.0270.2460.317
speciesMegasphaera_elsdenii0.0270.2480.319
speciesSutterella_wadsworthensis-0.0260.270.346
speciesCollinsella_tanakaei-0.0250.2720.348
speciesHoldemania_filiformis0.0240.2930.374
genusMegamonas-0.0240.3010.383
speciesEubacterium_limosum-0.0240.3040.386
speciesMegamonas_unclassified-0.0240.3050.386
familyPodoviridae-0.0240.3060.386
genusSuccinatimonas-0.0230.3120.392
speciesSuccinatimonas_hippei-0.0230.3120.392
speciesBacteroides_nordii-0.0230.3130.392
speciesParabacteroides_sp_20_30.0230.3150.393
speciesBifidobacterium_angulatum0.0230.3180.396
genusButyricicoccus-0.0230.320.396
speciesButyricicoccus_pullicaecorum-0.0230.320.396
familySuccinivibrionaceae-0.0220.3320.41
speciesClostridium_leptum0.0220.3330.41
speciesCoprobacillus_sp_29_10.0220.3360.413
genusButyricimonas-0.0220.3450.421
speciesButyricimonas_synergistica-0.0220.3450.421
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0220.3450.421
genusMyoviridae_noname0.0210.3570.434
speciesEggerthella_unclassified-0.0210.3610.438
speciesBacteroides_fragilis-0.0210.3630.439
speciesClostridium_spiroforme-0.0210.3670.443
speciesMegamonas_funiformis-0.0210.3690.444
speciesPrevotella_copri0.0210.3730.448
speciesBacteroides_salyersiae-0.020.3760.45
speciesBifidobacterium_breve0.020.380.454
classNegativicutes0.020.3890.461
orderCaudovirales0.020.3890.461
orderSelenomonadales0.020.3890.461
speciesLactobacillus_casei_paracasei0.020.3930.465
speciesCoprobacillus_sp_D60.020.3990.471
genusCoprobacillus-0.0190.4140.487
speciesDesulfovibrio_desulfuricans0.0190.4210.494
familyPropionibacteriaceae-0.0180.4250.498
genusEggerthella-0.0180.4330.506
genusPropionibacterium0.0180.4340.506
speciesBacteroides_salanitronis-0.0180.4440.516
orderPseudomonadales0.0170.4640.538
speciesAlistipes_shahii-0.0170.4710.545
speciesPeptostreptococcus_anaerobius0.0160.4810.555
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0160.4860.559
speciesClostridium_ramosum-0.0160.4990.573
speciesEggerthella_sp_1_3_56FAA0.0150.5070.581
speciesErysipelotrichaceae_bacterium_6_1_450.0150.5130.586
speciesParaprevotella_clara0.0150.5150.587
speciesLactobacillus_reuteri0.0150.5220.594
genusParaprevotella0.0140.5360.608
speciesRoseburia_unclassified-0.0140.540.611
speciesButyrivibrio_unclassified0.0140.5520.623
familyPrevotellaceae-0.0130.5630.634
speciesParaprevotella_unclassified0.0130.5720.643
classDeltaproteobacteria0.0130.5850.653
orderDesulfovibrionales0.0130.5850.653
familyDesulfovibrionaceae0.0130.5850.653
genusBilophila-0.0120.5950.662
speciesBilophila_unclassified-0.0120.6040.671
speciesPrevotella_stercorea-0.0120.6180.685
familySiphoviridae0.0110.650.717
speciesBacteroides_plebeius-0.0110.650.717
speciesAlistipes_unclassified-0.0090.6850.754
speciesParabacteroides_sp_D13-0.0090.6970.765
speciesAlistipes_finegoldii-0.0090.70.767
familyStaphylococcaceae0.0080.7210.788
genusFusobacterium0.0080.7230.788
speciesParaprevotella_xylaniphila0.0080.7270.791
speciesSlackia_piriformis-0.0080.730.792
speciesStreptococcus_phage_Sfi210.0080.7380.799
speciesAlistipes_indistinctus0.0080.740.799
speciesFusobacterium_ulcerans0.0070.7570.816
genusStaphylococcus0.0070.7590.816
speciesLactococcus_phage_bIL67-0.0070.7620.817
speciesBacteroides_sp_4_3_47FAA-0.0070.7750.829
speciesHoldemania_sp_AP2-0.0060.7880.841
genusSlackia0.0060.7930.845
speciesLactobacillus_acidophilus0.0060.7980.846
speciesBacteroides_sp_3_1_19-0.0060.7980.846
speciesFusobacterium_varium-0.0050.8170.865
speciesBacteroides_eggerthii0.0050.8210.867
genusParasutterella-0.0050.8290.871
speciesParasutterella_excrementihominis-0.0050.8290.871
genusRuminococcaceae_noname0.0050.8330.872
speciesRuminococcaceae_bacterium_D160.0050.8330.872
familyFusobacteriaceae0.0050.8410.877
speciesEggerthella_lenta0.0050.8440.877
speciesBilophila_wadsworthia0.0050.8440.877
speciesBacteroides_barnesiae-0.0040.850.882
speciesBacteroides_cellulosilyticus0.0040.8530.883
familyAcidaminococcaceae-0.0040.8570.885
speciesBacteroides_oleiciplenus0.0040.8680.892
phylumFusobacteria-0.0040.8710.892
classFusobacteriia-0.0040.8710.892
orderFusobacteriales-0.0040.8710.892
familyBurkholderiales_noname-0.0030.8830.902
speciesClostridium_hathewayi0.0030.8940.911
genusPrevotella-0.0030.8970.912
genusBurkholderiales_noname-0.0030.9090.919
speciesLactococcus_phage_936_sensu_lato0.0030.9090.919
speciesBurkholderiales_bacterium_1_1_47-0.0030.9090.919
speciesFusobacterium_mortiferum-0.0020.9170.925
speciesAcidaminococcus_intestini0.0020.9360.942
speciesSutterella_parvirubra-0.0010.980.984
speciesPrevotella_bivia0.00.9910.993
genusPeptoniphilus0.00.9950.995
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.06149866049480.0316804802280.01449430342251153838.7584
Crohns diseaseSpain17660.04257036429880.03496343488680.0164937365265903030.0249
ObesityDenmark1691230.03841866838720.04839312901530.0226216253957338211.121
Type II diabetesDenmark752770.04446755227930.03987226029580.0886843908513916630.0456
Ulcerative colitisSpain78660.03217327852830.03496343488680.2654801021081273642.0136
Rheumatoid arthritisChina127980.05586345033720.0550030563310.5429987491131860162.0302
Type II diabetesSweden53920.0472109719020.05302985719360.5516682278911741358.9672
Colorectal cancerAustria64350.08252127730690.05685665709730.6899675119782282077.2094
Type II diabetesChina1831850.04906766144170.04498293283690.8170624723342690088.8992
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382