MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:13:24 PST
Job id & description: 2399, purine19
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
V1.FI04_GL01629663813936CompleteK03784COG0813unknownunknown100.0100.0100.0
DOF006_GL00045873835339CompleteK03784COG0813FusobacteriaFusobacterium100.0100.0100.0
159268001-stool1_revised3819113CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0189_GL01552603805038CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0199_GL00662433805249CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0357_GL00074593808086CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0448_GL00580743810678CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC7-1_GL01567603812786CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI10_GL01273093852282CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0239_GL01658403805989CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0268_GL00160533825669Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
O2.UC32-1_GL00139323811885CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI05_GL00154633813955CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0203_GL00758153805315CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0189_GL00756473824054CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC11-5_GL01278533833835CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
MH0044_GL00179103821498CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0100_GL00962533860695CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD20-4_GL01169083851256CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI22_GL00287433852649CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0286_GL00061843845166CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0372_GL00567723808586CompleteK00772COG0813unknownunknown100.0100.0100.0
O2.UC14-2_GL00191353849497CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0130_GL00635583842149CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0229_GL01785703824855Lack 3'-endK03783COG0005FirmicutesPseudoflavonifractor100.0100.0100.0
O2.UC24-2_GL01104053849881CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-108A_GL01512453855843CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-148A_GL00499033817765Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
V1.FI14_GL00062263852329CompleteK03784COG0813FirmicutesSubdoligranulum100.0100.0100.0
MH0012_GL00607773859386CompleteK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
MH0358_GL00798823846507CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC11-2_GL00657933849356CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC36-2_GL01171163831071CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-47A_GL00027123818076Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0006_GL01540533820854CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0014_GL00535263821163CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0088_GL00818483860415CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0088_GL00964533860424CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0358_GL01046983827294CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0447_GL00024033810613CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD32-4_GL01040643851545Lack 5'-endK03783COG0005Firmicutesunknown100.0100.0100.0
V1.FI14_GL02108993814210CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0176_GL00445173823734CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0370_GL00504723846788CompleteK03784COG0813Actinobacteriaunknown100.0100.0100.0
MH0419_GL00549753809839CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC41-1_GL01704103850365CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0007_GL00122273820886CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0098_GL00949323860631CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0260_GL01219623825485CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0345_GL01219313846202CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0358_GL01382383827305CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
MH0366_GL01307023808339CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-105A_GL01343623836579CompleteK03784COG0813unknownunknown100.0100.0100.0
DLF014_GL00132673816039CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0002_GL00683953859069CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0006_GL02202173859245CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0053_GL00182543859960CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0067_GL00581873860187CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0096_GL00289283860552Lack 3'-endK03783COG0005unknownunknown100.0100.0100.0
MH0104_GL01025873822460CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0111_GL00668483841790CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0111_GL00807973841791CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0233_GL01061973844158CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0345_GL01712153826994CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD38-0_GL00647723832482Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
V1.UC26-4_GL00232473853364CompleteK05810COG1496FirmicutesPeptoniphilus100.0100.0100.0
MH0096_GL00680593860571CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0196_GL01720703862610CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC52-2_GL00809013850774CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI02_GL01211893852076Lack 3'-endK03783COG0005Firmicutesunknown100.0100.0100.0
DLF014_GL00530913816047CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0062_GL00461793860105CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0100_GL01218403841568CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0169_GL00648003861991CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC48-0_GL00555773850562CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0096_GL00045813860537CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0104_GL00068303860782CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0111_GL01132073841799CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0165_GL01155473861951CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0203_GL02070693862846CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0239_GL00230963863450CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0376_GL01886673847048CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC17-2_GL00146693834016CompleteK05810COG1496unknownunknown100.0100.0100.0
1045856.EcWSU1_005963858585CompleteK03784COG0813ProteobacteriaEnterobacter100.0100.0100.0
MH0189_GL00543823862391CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC8-2_GL00495463851015CompleteK03784COG0813unknownunknown100.0100.0100.0
1006551.KOX_103203858570CompleteK03784COG0813ProteobacteriaKlebsiella100.0100.0100.0
MH0006_GL00050743859144CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0151_GL00698903861774CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0179_GL00329433862139CompleteK03784COG0813ProteobacteriaSalmonella100.0100.0100.0
MH0448_GL01972043829779Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
V1.CD10-0_GL00328043851050CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
V1.CD18-3_GL00364443813028CompleteK05810COG1496FusobacteriaFusobacterium100.0100.0100.0
DLM010_GL00350213816114CompleteK05810COG1496FusobacteriaFusobacterium100.0100.0100.0
MH0055_GL00073383860011CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0205_GL00000563862886CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0346_GL01182433846245CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
T2D-77A_GL00668393856693Lack 5'-endK05810COG1496FusobacteriaFusobacterium100.0100.0100.0
944560.HMPREF9058_21103859035CompleteK03784COG0813ActinobacteriaActinomyces100.0100.0100.0
MH0009_GL00145603840148CompleteK03784COG0813unknownunknown100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesSubdoligranulum_unclassified0.5312.29e-1367.79e-134
genusSubdoligranulum0.533.3e-1367.79e-134
familyRuminococcaceae0.4483.71e-935.84e-91
classClostridia0.3927.9e-707.46e-68
orderClostridiales0.3927.9e-707.46e-68
speciesAnaerotruncus_unclassified0.3738.62e-636.78e-61
speciesEubacterium_siraeum0.3611.63e-581.1e-56
genusAnaerotruncus0.3572.61e-571.54e-55
speciesCoprococcus_catus0.3542.94e-561.54e-54
genusCoprococcus0.3543.66e-561.73e-54
phylumFirmicutes0.3475.13e-542.2e-52
familyBacteroidales_noname0.3283.07e-481.04e-46
genusBacteroidales_noname0.3283.07e-481.04e-46
speciesBacteroidales_bacterium_ph80.3283.07e-481.04e-46
phylumBacteroidetes-0.3244.46e-471.24e-45
classBacteroidia-0.3244.47e-471.24e-45
orderBacteroidales-0.3244.47e-471.24e-45
speciesAlistipes_senegalensis0.3246.61e-471.73e-45
speciesRuminococcus_gnavus-0.3221.94e-464.82e-45
speciesCoprococcus_comes0.3066.34e-421.5e-40
speciesRoseburia_hominis0.3061.06e-412.38e-40
phylumVerrucomicrobia0.3051.7e-412.97e-40
classVerrucomicrobiae0.3051.7e-412.97e-40
orderVerrucomicrobiales0.3051.7e-412.97e-40
familyVerrucomicrobiaceae0.3051.7e-412.97e-40
genusAkkermansia0.3051.7e-412.97e-40
speciesAkkermansia_muciniphila0.3051.7e-412.97e-40
speciesMethanobrevibacter_smithii0.3021.16e-401.96e-39
speciesClostridium_leptum0.32.55e-404.15e-39
genusMethanobrevibacter0.2995.64e-408.87e-39
classMethanobacteria0.2988.62e-401.23e-38
orderMethanobacteriales0.2988.62e-401.23e-38
familyMethanobacteriaceae0.2988.62e-401.23e-38
phylumEuryarchaeota0.2919.79e-381.36e-36
speciesRuminococcus_obeum0.2852.91e-363.92e-35
orderCoriobacteriales0.2751.09e-331.39e-32
familyCoriobacteriaceae0.2751.09e-331.39e-32
genusOxalobacter0.2732.92e-333.53e-32
speciesOxalobacter_formigenes0.2732.92e-333.53e-32
speciesEubacterium_hallii0.2725.55e-336.26e-32
genusBarnesiella0.2725.58e-336.26e-32
speciesBarnesiella_intestinihominis0.2725.58e-336.26e-32
speciesEubacterium_ramulus0.2725.7e-336.26e-32
familyOxalobacteraceae0.2718.14e-338.73e-32
genusPseudoflavonifractor0.2675.8e-325.95e-31
speciesPseudoflavonifractor_capillosus0.2675.8e-325.95e-31
genusAdlercreutzia0.2621.12e-301.1e-29
speciesAdlercreutzia_equolifaciens0.2621.12e-301.1e-29
speciesLachnospiraceae_bacterium_7_1_58FAA0.2571.72e-291.66e-28
speciesDorea_longicatena0.2554.52e-294.27e-28
genusDorea0.2538.66e-298.01e-28
speciesCollinsella_aerofaciens0.2481.25e-271.13e-26
familyRikenellaceae0.2464.2e-273.67e-26
genusAlistipes0.2464.2e-273.67e-26
genusButyrivibrio0.2449.34e-278.02e-26
speciesAlistipes_indistinctus0.2449.89e-278.34e-26
familyBacteroidaceae-0.2431.85e-261.51e-25
genusBacteroides-0.2431.85e-261.51e-25
genusRuminococcus0.2413.97e-263.18e-25
speciesLachnospiraceae_bacterium_3_1_46FAA0.245.52e-264.34e-25
genusCollinsella0.246.19e-264.79e-25
speciesOlsenella_unclassified0.2364.1e-253.12e-24
speciesAlistipes_shahii0.2315.54e-244.15e-23
speciesBifidobacterium_adolescentis0.2291.04e-237.67e-23
speciesDorea_formicigenerans0.2281.6e-231.16e-22
speciesRuminococcus_lactaris0.2241.08e-227.72e-22
speciesCoprobacillus_unclassified-0.2222.18e-221.54e-21
speciesRuminococcus_bromii0.2172.5e-211.74e-20
genusOlsenella0.2154.75e-213.25e-20
genusDesulfovibrio0.2149.35e-216.3e-20
speciesMitsuokella_unclassified0.2131.43e-209.51e-20
genusHoldemania0.2122.04e-201.33e-19
genusMitsuokella0.2122.05e-201.33e-19
speciesButyrivibrio_crossotus0.215.07e-203.23e-19
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.2071.66e-191.04e-18
phylumActinobacteria0.2071.78e-191.09e-18
classActinobacteria0.2071.78e-191.09e-18
genusEubacterium0.2045.77e-193.49e-18
familyEubacteriaceae0.2045.86e-193.5e-18
familyLachnospiraceae0.2037.66e-194.52e-18
speciesMethanobrevibacter_unclassified0.2029.82e-195.72e-18
speciesAlistipes_onderdonkii0.2011.83e-181.05e-17
speciesCoprococcus_sp_ART55_10.1977.46e-184.24e-17
speciesAlistipes_finegoldii0.1942.49e-171.4e-16
genusCoprobacillus-0.1858.38e-164.65e-15
genusOdoribacter0.1831.6e-158.78e-15
speciesEubacterium_ventriosum0.1822.19e-151.19e-14
classDeltaproteobacteria0.184.1e-152.15e-14
orderDesulfovibrionales0.184.1e-152.15e-14
familyDesulfovibrionaceae0.184.1e-152.15e-14
speciesHoldemania_filiformis0.1796.82e-153.54e-14
genusFaecalibacterium0.1771.11e-145.63e-14
speciesFaecalibacterium_prausnitzii0.1771.11e-145.63e-14
speciesAnaerostipes_hadrus0.1752.33e-141.17e-13
speciesAlistipes_putredinis0.1743.78e-141.88e-13
speciesClostridium_sp_L2_500.1719.44e-144.64e-13
classErysipelotrichia0.1719.75e-144.65e-13
orderErysipelotrichales0.1719.75e-144.65e-13
familyErysipelotrichaceae0.1719.75e-144.65e-13
speciesClostridium_ramosum-0.171.25e-135.9e-13
speciesErysipelotrichaceae_bacterium_21_30.1691.69e-137.9e-13
speciesCoprococcus_eutactus0.1691.82e-138.42e-13
speciesEubacterium_eligens0.1682.35e-131.08e-12
speciesFusobacterium_varium-0.1682.64e-131.2e-12
genusRuminococcaceae_noname0.1656.14e-132.73e-12
speciesRuminococcaceae_bacterium_D160.1656.14e-132.73e-12
speciesOdoribacter_splanchnicus0.1641.06e-124.68e-12
phylumFusobacteria-0.1631.31e-125.62e-12
classFusobacteriia-0.1631.31e-125.62e-12
orderFusobacteriales-0.1631.31e-125.62e-12
speciesDesulfovibrio_desulfuricans0.1621.93e-128.21e-12
speciesOscillibacter_unclassified0.1612.23e-129.4e-12
speciesHaemophilus_parainfluenzae-0.1612.62e-121.09e-11
genusHaemophilus-0.163.02e-121.25e-11
familyFusobacteriaceae-0.163.13e-121.28e-11
speciesLachnospiraceae_bacterium_1_4_56FAA-0.163.28e-121.33e-11
speciesEubacterium_biforme0.163.29e-121.33e-11
orderPasteurellales-0.1585.9e-122.34e-11
familyPasteurellaceae-0.1585.9e-122.34e-11
genusFusobacterium-0.1586.94e-122.73e-11
speciesClostridium_bolteae-0.1561.21e-114.72e-11
speciesLachnospiraceae_bacterium_6_1_63FAA-0.1551.73e-116.69e-11
genusGordonibacter0.1551.83e-116.95e-11
speciesGordonibacter_pamelaeae0.1551.83e-116.95e-11
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.1551.84e-116.95e-11
speciesRuminococcus_champanellensis0.1532.58e-119.66e-11
speciesAlistipes_sp_AP110.1532.88e-111.07e-10
genusCoprobacter0.1533.15e-111.15e-10
speciesCoprobacter_fastidiosus0.1533.15e-111.15e-10
speciesStreptococcus_thermophilus0.1498.73e-113.17e-10
familyOscillospiraceae0.1452.67e-109.55e-10
genusOscillibacter0.1452.67e-109.55e-10
speciesSubdoligranulum_sp_4_3_54A2FAA0.1443.71e-101.32e-09
genusErysipelotrichaceae_noname0.1444.45e-101.57e-09
orderBifidobacteriales0.1426.23e-102.16e-09
familyBifidobacteriaceae0.1426.23e-102.16e-09
speciesClostridium_nexile-0.1426.61e-102.28e-09
speciesEubacterium_rectale0.1426.74e-102.31e-09
speciesRuminococcus_sp_5_1_39BFAA0.1417.99e-102.71e-09
genusBifidobacterium0.1418.41e-102.84e-09
genusVeillonella-0.1391.52e-095.09e-09
speciesBacteroides_pectinophilus0.1382.24e-097.45e-09
speciesLachnospiraceae_bacterium_2_1_58FAA-0.1372.53e-098.35e-09
speciesRuminococcus_torques0.1372.75e-099.01e-09
speciesClostridium_clostridioforme-0.1373.09e-091.01e-08
speciesVeillonella_unclassified-0.1354.49e-091.45e-08
genusAnaerostipes0.1337.11e-092.28e-08
genusLachnospiraceae_noname0.131.6e-085.1e-08
speciesHoldemania_unclassified0.1273.18e-081.01e-07
speciesFusobacterium_ulcerans-0.1273.76e-081.18e-07
speciesRuminococcus_callidus0.1273.78e-081.18e-07
speciesMegasphaera_micronuciformis-0.1273.93e-081.22e-07
speciesStreptococcus_mitis_oralis_pneumoniae-0.1264.3e-081.33e-07
speciesDesulfovibrio_piger0.1264.33e-081.33e-07
speciesVeillonella_atypica-0.1264.54e-081.38e-07
speciesKlebsiella_pneumoniae-0.1255.81e-081.76e-07
genusBilophila0.1256.08e-081.83e-07
speciesVeillonella_parvula-0.1248.29e-082.48e-07
speciesBilophila_unclassified0.1238.69e-082.58e-07
speciesVeillonella_dispar-0.1231.02e-073.01e-07
speciesErysipelotrichaceae_bacterium_6_1_450.1211.39e-074.08e-07
speciesBilophila_wadsworthia0.1192.33e-076.79e-07
genusKlebsiella-0.1192.53e-077.33e-07
speciesBacteroides_ovatus-0.1192.6e-077.48e-07
classGammaproteobacteria-0.1173.82e-071.09e-06
phylumProteobacteria-0.1173.87e-071.1e-06
speciesMegamonas_unclassified-0.1165.2e-071.47e-06
speciesBacteroides_thetaiotaomicron-0.1165.29e-071.49e-06
genusMegamonas-0.1155.79e-071.62e-06
genusPhascolarctobacterium0.1139.83e-072.71e-06
speciesPhascolarctobacterium_succinatutens0.1139.83e-072.71e-06
speciesAggregatibacter_segnis-0.1131.03e-062.83e-06
speciesBacteroides_stercoris-0.1121.1e-063e-06
speciesBacteroides_cellulosilyticus0.1121.24e-063.36e-06
speciesAnaerostipes_unclassified-0.1111.38e-063.72e-06
genusPorphyromonas0.111.69e-064.53e-06
speciesLactococcus_phage_P6800.1092.46e-066.56e-06
speciesMegamonas_hypermegale-0.1073.28e-068.7e-06
speciesMegamonas_rupellensis-0.1064.46e-061.18e-05
genusAggregatibacter-0.1055.11e-061.34e-05
speciesClostridium_symbiosum-0.1055.12e-061.34e-05
speciesBlautia_producta-0.1046.32e-061.64e-05
genusActinobacillus-0.1037.35e-061.89e-05
speciesActinobacillus_unclassified-0.1037.35e-061.89e-05
speciesBifidobacterium_longum0.1037.74e-061.97e-05
speciesLachnospiraceae_bacterium_2_1_46FAA-0.1029.45e-062.4e-05
genusFlavonifractor-0.1029.62e-062.42e-05
speciesFlavonifractor_plautii-0.1029.62e-062.42e-05
familyAcidaminococcaceae0.1029.88e-062.47e-05
genusCatenibacterium0.1021.04e-052.57e-05
speciesCatenibacterium_mitsuokai0.1021.04e-052.57e-05
speciesLachnospiraceae_bacterium_5_1_57FAA-0.1011.14e-052.8e-05
genusPantoea-0.1011.16e-052.82e-05
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genusParaprevotella0.0880.0001310.00029
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speciesLactococcus_lactis0.0730.001630.00321
speciesBacteroides_eggerthii0.0730.001640.00321
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speciesStreptococcus_lutetiensis-0.0720.001880.00365
speciesFusobacterium_nucleatum-0.0720.001950.00377
speciesOdoribacter_laneus0.0710.002030.00391
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speciesTuricibacter_sanguinis0.070.002460.0047
speciesDialister_succinatiphilus0.070.002570.00489
speciesEscherichia_coli-0.0690.002860.00542
speciesBifidobacterium_breve-0.0680.003150.00595
speciesParabacteroides_goldsteinii0.0670.003610.00679
speciesClostridium_citroniae-0.0670.003630.00679
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speciesLactococcus_phage_jm20.0650.00470.00868
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speciesOscillibacter_sp_KLE_1728-0.0630.006720.012
speciesErysipelotrichaceae_bacterium_3_1_53-0.0620.007750.0138
speciesDialister_invisus0.0610.008160.0145
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speciesCollinsella_intestinalis-0.0610.008650.0152
speciesPrevotella_copri-0.0610.008670.0152
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familyPorphyromonadaceae0.0580.01160.0201
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speciesRoseburia_unclassified0.0570.01330.0228
speciesBacteroides_dorei0.0570.01350.0231
speciesEnterobacter_aerogenes-0.0570.01360.0232
speciesProteus_mirabilis-0.0570.01410.0239
speciesC2likevirus_unclassified0.0570.01420.024
speciesParabacteroides_sp_D130.0560.01610.0271
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genusC2likevirus0.0550.01670.0279
genusParabacteroides-0.0550.01670.0279
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speciesPorphyromonas_uenonis0.0540.02050.034
speciesBacteroides_uniformis0.0530.02130.0352
speciesBifidobacterium_angulatum0.0530.02310.038
speciesPrevotella_stercorea-0.0520.02370.0388
orderBurkholderiales-0.0510.02640.0431
genusLeuconostoc0.0490.03310.0539
speciesLactobacillus_ruminis0.0490.03390.055
familyBacillales_noname-0.0480.03760.0606
genusGemella-0.0480.03760.0606
speciesMitsuokella_multacida0.0470.04110.066
speciesStreptococcus_infantarius-0.0460.04510.0722
speciesParabacteroides_distasonis-0.0460.04550.0726
speciesBlautia_hydrogenotrophica0.0460.0470.0747
genusProteus-0.0450.04970.0787
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genusClostridium0.0440.05520.0863
genusButyricicoccus-0.0440.05580.0866
speciesButyricicoccus_pullicaecorum-0.0440.05580.0866
speciesAlistipes_sp_HGB50.0430.06540.101
speciesErysipelotrichaceae_bacterium_2_2_44A0.0420.06810.105
speciesStreptococcus_gordonii-0.0420.06860.105
genusRoseburia0.0420.06970.107
speciesCoprobacillus_sp_29_10.0420.07020.107
speciesPeptostreptococcus_anaerobius0.0420.07030.107
familyClostridiales_noname0.0410.07280.11
speciesLactobacillus_delbrueckii0.0410.07510.114
familyLactobacillaceae0.0410.07890.119
speciesAcidaminococcus_unclassified-0.0410.07970.12
speciesLactococcus_phage_phi70.040.08120.122
speciesLactobacillus_casei_paracasei0.0390.08950.134
genusCoriobacteriaceae_noname0.0390.09010.134
familySuccinivibrionaceae0.0390.09180.136
speciesCoriobacteriaceae_bacterium_phI0.0390.09340.138
speciesRoseburia_inulinivorans0.0390.09440.139
genusWeissella-0.0380.09920.146
speciesMegasphaera_unclassified-0.0380.09950.146
genusStaphylococcus0.0380.1020.149
speciesStreptococcus_anginosus-0.0380.1030.15
genusEnterobacter-0.0370.1090.158
speciesLactobacillus_reuteri0.0370.110.159
speciesCoprobacillus_sp_D60.0370.110.159
familyActinomycetaceae0.0370.1140.164
speciesStreptococcus_australis-0.0360.1190.171
speciesLactobacillus_vaginalis-0.0360.120.172
speciesEnterobacter_cloacae-0.0360.1230.175
speciesBacteroides_nordii0.0350.1270.181
speciesWeissella_confusa-0.0350.1320.187
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genusPeptostreptococcus-0.0340.1380.194
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genusSuccinatimonas0.0340.1470.204
speciesSuccinatimonas_hippei0.0340.1470.204
genusPropionibacterium0.0330.1560.216
speciesAlistipes_unclassified0.0330.1580.218
speciesRuminococcus_sp_JC3040.0330.1590.219
familyStaphylococcaceae0.0320.1640.224
speciesLactobacillus_mucosae-0.0320.1640.224
familyMyoviridae-0.0320.1680.229
genusParasutterella0.0320.1730.235
speciesParasutterella_excrementihominis0.0320.1730.235
speciesLactobacillus_acidophilus0.0310.1820.246
speciesPeptostreptococcus_stomatis-0.030.1930.26
familyBurkholderiales_noname0.030.1940.261
genusBurkholderiales_noname0.030.1950.261
speciesBurkholderiales_bacterium_1_1_470.030.1950.261
speciesCollinsella_tanakaei-0.030.1960.261
speciesBifidobacterium_dentium0.0280.2270.302
speciesParabacteroides_sp_20_30.0280.2310.306
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familyPrevotellaceae-0.0270.2370.312
genusMorganella-0.0270.2440.319
genusCitrobacter-0.0270.2440.319
speciesMorganella_morganii-0.0270.2440.319
speciesWeissella_cibaria-0.0270.250.326
speciesLeuconostoc_lactis-0.0270.2510.326
speciesLactococcus_phage_936_sensu_lato0.0260.2520.327
speciesPeptostreptococcaceae_noname_unclassified0.0260.2560.331
speciesBacteroides_fluxus-0.0250.2750.355
speciesCitrobacter_unclassified-0.0250.2770.356
speciesKlebsiella_sp_MS_92_3-0.0250.2790.358
orderBacillales-0.0250.2820.36
genusSolobacterium-0.0250.2830.36
speciesSolobacterium_moorei-0.0250.2830.36
classEpsilonproteobacteria-0.0250.2850.36
orderCampylobacterales-0.0250.2850.36
speciesGemella_morbillorum-0.0250.2850.36
speciesParabacteroides_johnsonii0.0250.2880.362
familyStreptococcaceae0.0240.290.364
speciesBacteroides_salanitronis0.0240.2920.366
speciesEubacterium_sp_3_1_31-0.0240.3040.38
speciesLactobacillus_plantarum0.0240.3090.385
speciesStreptococcus_vestibularis-0.0230.310.385
speciesClostridium_sp_ATCC_BAA_442-0.0230.3150.39
speciesBacteroides_sp_1_1_6-0.0230.3170.392
speciesOscillibacter_sp_KLE_1745-0.0230.3190.393
speciesStreptococcus_phage_Sfi210.0230.3220.396
genusStreptococcus0.0220.3470.425
orderLactobacillales0.0210.3540.433
genusCampylobacter-0.0210.3630.443
speciesBacteroides_oleiciplenus-0.0210.3670.446
genusClostridiales_noname-0.0210.3680.447
speciesStreptococcus_parasanguinis0.0210.3740.453
familyLeuconostocaceae0.020.3790.458
speciesLactobacillus_amylovorus0.020.3820.46
classNegativicutes-0.020.3920.47
orderSelenomonadales-0.020.3920.47
speciesCollinsella_unclassified-0.020.3930.47
speciesLactobacillus_crispatus-0.020.3940.47
speciesBacteroides_clarus0.0190.4140.492
speciesEnterobacteria_phage_HK544-0.0180.4360.516
speciesSutterella_wadsworthensis0.0180.4360.516
speciesCitrobacter_freundii-0.0180.4420.522
speciesBifidobacterium_bifidum-0.0170.450.53
genusAcidaminococcaceae_unclassified0.0170.4740.555
speciesOdoribacter_unclassified0.0170.4740.555
speciesEubacterium_limosum0.0160.4860.568
familyPropionibacteriaceae0.0160.4880.569
genusParvimonas0.0160.5020.584
speciesRothia_mucilaginosa-0.0150.5050.584
speciesParvimonas_unclassified0.0150.5050.584
speciesRoseburia_intestinalis0.0150.5150.594
familyCampylobacteraceae-0.0150.5190.597
genusLambdalikevirus0.0150.5220.599
genusSlackia-0.0150.5260.602
genusSutterella0.0150.5270.602
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speciesSutterella_parvirubra-0.0140.5530.629
speciesEnterococcus_faecium-0.0130.5650.641
speciesLactococcus_garvieae-0.0130.5660.641
speciesAcidaminococcus_intestini0.0130.570.644
speciesLactobacillus_gasseri-0.0120.590.663
speciesBacteroides_finegoldii0.0120.590.663
speciesHoldemania_sp_AP20.0120.6160.69
speciesBacteroides_barnesiae0.0120.6170.69
speciesBacteroides_coprocola-0.0110.6360.71
speciesEnterococcus_faecalis0.0110.6430.716
speciesBacteroides_sp_3_1_190.010.6670.741
speciesBacteroides_coprophilus0.010.6740.747
speciesEscherichia_unclassified0.010.6790.751
speciesLactobacillus_sanfranciscensis-0.0090.6820.752
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0090.6880.757
speciesKlebsiella_unclassified-0.0090.6980.766
genusPeptoniphilus0.0080.7140.779
genusMyoviridae_noname-0.0080.7150.779
speciesLactobacillus_oris-0.0080.7150.779
speciesKlebsiella_oxytoca-0.0080.720.783
speciesKlebsiella_phage_KP360.0080.7340.796
speciesClostridium_hathewayi-0.0070.7510.813
genusRothia0.0070.760.821
speciesBacteroides_faecis-0.0070.7720.829
familyClostridiales_Family_XI_Incertae_Sedis0.0070.7730.829
speciesLactobacillus_fermentum-0.0070.7730.829
familyMicrococcaceae0.0070.7760.83
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0070.7770.83
speciesClostridium_spiroforme0.0060.7790.83
speciesBacteroides_sp_4_3_47FAA0.0060.8050.855
speciesLactobacillus_rhamnosus0.0060.8060.855
genusAcidaminococcus0.0060.8080.855
orderPseudomonadales-0.0050.8180.863
speciesPrevotella_bivia0.0050.8210.863
speciesMegasphaera_elsdenii0.0050.8210.863
genusTunalikevirus0.0050.8270.867
familyEnterococcaceae-0.0050.8450.884
speciesLactococcus_phage_bIL67-0.0030.8850.922
familyPodoviridae0.0030.8870.922
speciesBacteroides_salyersiae-0.0030.8910.922
speciesSlackia_piriformis0.0030.8980.922
phylumSynergistetes0.0030.8990.922
classSynergistia0.0030.8990.922
orderSynergistales0.0030.8990.922
familySynergistaceae0.0030.8990.922
genusSutterellaceae_unclassified0.0030.9010.922
speciesEggerthella_sp_1_3_56FAA0.0030.9010.922
speciesClostridium_asparagiforme0.0030.9030.923
genusEnterococcus-0.0020.9180.935
familyViruses_noname-0.0020.9210.935
genusViruses_noname-0.0020.9210.935
speciesStreptococcus_mutans-0.0020.9290.941
genusPyramidobacter-0.0020.9370.944
speciesPyramidobacter_piscolens-0.0020.9370.944
speciesClostridium_sp_KLE_17550.0020.9380.944
speciesStreptococcus_salivarius-0.0020.9440.948
speciesEggerthella_lenta0.0010.9560.958
speciesBacteroides_massiliensis0.00.9840.984
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.03102229071460.03663274146940.0052725167656966932.4801
ObesityDenmark1691230.0400409483160.04472798557050.0404553040022450914.8269
Type II diabetesDenmark752770.04864939906170.04212050136030.0490079558863715823.4635
Crohns diseaseSpain17660.02732269610810.03364064975280.07932303530541301443.2718
Type II diabetesSweden53920.04823895219820.05514491079490.093972404563342511.5984
Type II diabetesChina1831850.03199629802850.02766645487270.1261506751411061935.0937
Ulcerative colitisSpain78660.03752453912950.03364064975280.140750451646877128.9338
Rheumatoid arthritisChina127980.0383936430710.03627826386270.199971822518894129.8163
Colorectal cancerAustria64350.05206877039180.05341424814560.8462070932092593587.7487
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382