MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:16:03 PST
Job id & description: 2400, purine20
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
O2.UC48-1_GL01400003869995CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD7-0_GL00484823871381CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0113_GL00466443880545CompleteK03784COG0813unknownunknown100.0100.0100.0
NOF008_GL01033353894321CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI33_GL00839623872185CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
V1.UC26-4_GL01886903872786CompleteK03784COG0813FirmicutesAnaerococcus100.0100.0100.0
MH0252_GL01780843883336CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0276_GL00750583864259CompleteK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
NLM031_GL00971983874334CompleteK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
O2.UC38-1_GL01663053869611Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
MH0244_GL01482703863577CompleteK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
MH0333_GL00564293884825CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
O2.UC36-0_GL01285393869532CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC7-0_GL00993213890078CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
V1.CD46-0_GL01164763871116CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC16-0_GL00481303872557CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC39-4_GL01068583892943CompleteK05810COG1496FusobacteriaFusobacterium100.0100.0100.0
469615.FGAG_008383878375CompleteK05810COG1496FusobacteriaFusobacterium100.0100.0100.0
764224817-stool1_revised3877869CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0006_GL01356923878756CompleteK03784COG0813unknownunknown100.0100.0100.0
717962.CC1_007903878268CompleteK03784COG0813FirmicutesCoprococcus100.0100.0100.0
DLM013_GL00648233873816CompleteK03784COG0813Actinobacteriaunknown100.0100.0100.0
HT14A_GL01008353896234CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0211_GL01895813882589CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0276_GL01728133883846CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0346_GL00127463865475CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
MH0447_GL03159833868231CompleteK03784COG0813unknownunknown100.0100.0100.0
N032A_GL00397613874825CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-62A_GL00170973895929CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
V1.CD10-0_GL00366353870391CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
MH0012_GL02321263879031CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0108_GL00935213880481CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0250_GL00056173883212CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0303_GL00666233884222CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0350_GL01077453865559CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0358_GL00512463865782CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0063_GL00117723879670CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0195_GL00007393882211Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
MH0275_GL00275133864217CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0382_GL00860423886109CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0399_GL01284393866893CompleteK03784COG0813unknownunknown100.0100.0100.0
N104A_GL00815123896282CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
O2.UC51-0_GL01430583889899CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
V1.CD54-0_GL01274743891068CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI14_GL01562543891580CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
V1.FI17_GL00378163891692CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI17_GL01770313871923CompleteK05810COG1496FusobacteriaFusobacterium100.0100.0100.0
MH0102_GL01285693880392CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0131_GL01385553880961CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0135_GL01014023881045CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0157_GL01045603881524CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0250_GL01258663863679CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0253_GL00984453863793Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0257_GL01648763863831CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0413_GL01216363867249CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC50-0_GL01507423889872CompleteK03784COG0813unknownunknown100.0100.0100.0
SZEY-22A_GL00467433875083CompleteK03784COG0813ProteobacteriaAggregatibacter100.0100.0100.0
T2D-57A_GL00994023895870CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI05_GL00865023871527CompleteK03784COG0813ActinobacteriaCollinsella100.0100.0100.0
763496533-stool1_revised3877543Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0124_GL01380143880761CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0126_GL00256073880789CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0189_GL01368863882097CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0402_GL01687943886682CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-15A_GL00146983875649CompleteK03784COG0813unknownunknown100.0100.0100.0
763435843-stool1_revised3897357Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
MH0200_GL00361323882365CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0272_GL01638803864176CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0437_GL01984543887696CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC8-2_GL01697143890169CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD3-0-PT_GL00368393870828CompleteK03784COG0813Proteobacteriaunknown100.0100.0100.0
V1.UC39-4_GL00126233892924CompleteK03784COG0813ProteobacteriaProvidencia100.0100.0100.0
V1.UC52-1_GL01865183893236CompleteK03784COG0813unknownunknown100.0100.0100.0
706434.HMPREF9429_013653878515CompleteK03784COG0813FirmicutesMegasphaera100.0100.0100.0
DLM022_GL01309353893784Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0012_GL01948093879014CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0200_GL01596713882379CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0350_GL01806653885179CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0390_GL01996823886427CompleteK03784COG0813unknownunknown100.0100.0100.0
N022A_GL00765643894665CompleteK03784COG0813unknownunknown100.0100.0100.0
N022A_GL00774323894666CompleteK03784COG0813unknownunknown100.0100.0100.0
NLM027_GL00898063875184CompleteK03784COG0813ProteobacteriaKlebsiella100.0100.0100.0
NLM027_GL00898063874313CompleteK03784COG0813ProteobacteriaEnterobacter100.0100.0100.0
290338.CKO_034073878192CompleteK03784COG0813ProteobacteriaCitrobacter100.0100.0100.0
469595.CSAG_032853878351CompleteK03784COG0813ProteobacteriaCitrobacter100.0100.0100.0
MH0189_GL00600183882041CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0244_GL01036703883122Lack 3'-endK03783COG0005unknownunknown100.0100.0100.0
MH0322_GL00322873884604CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC21-4_GL01227413872663CompleteK03784COG0813ProteobacteriaEnterobacter100.0100.0100.0
MH0390_GL01362383886405CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0407_GL01915683886813Lack 3'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
V1.CD7-0-PN_GL00318313891200CompleteK03784COG0813FirmicutesLactobacillus100.0100.0100.0
158499257-stool1_revised3896575Lack 3'-endK03783COG0005unknownunknown100.0100.0100.0
MH0247_GL00345653883180Lack 5'-endK03784COG0813ProteobacteriaKlebsiella100.0100.0100.0
MH0277_GL00223143883890CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
NOM004_GL00131813894359CompleteK05810COG1496FusobacteriaFusobacterium100.0100.0100.0
O2.UC26-0_GL00244493889042CompleteK05810COG1496FusobacteriaFusobacterium100.0100.0100.0
360104.CCC13826_05543878211CompleteK05810COG1496ProteobacteriaCampylobacter100.0100.0100.0
MH0090_GL00589823880046CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0355_GL02000743885264CompleteK03784COG0813unknownunknown100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
genusSubdoligranulum0.3338.91e-504.21e-47
speciesSubdoligranulum_unclassified0.3291.36e-483.21e-46
speciesMethanobrevibacter_smithii0.3137.81e-449.85e-42
genusMethanobrevibacter0.3138.35e-449.85e-42
classMethanobacteria0.3121.72e-431.16e-41
orderMethanobacteriales0.3121.72e-431.16e-41
familyMethanobacteriaceae0.3121.72e-431.16e-41
phylumEuryarchaeota0.3073.34e-421.97e-40
familyRuminococcaceae0.3029.41e-414.94e-39
classBacteroidia-0.33.35e-401.32e-38
orderBacteroidales-0.33.35e-401.32e-38
phylumBacteroidetes-0.33.36e-401.32e-38
orderClostridiales0.2918.13e-382.74e-36
classClostridia0.2918.14e-382.74e-36
speciesCoprococcus_catus0.2839.91e-363.12e-34
speciesAlistipes_senegalensis0.2733.33e-339.82e-32
speciesEubacterium_siraeum0.2683.93e-321.09e-30
speciesAnaerotruncus_unclassified0.2571.69e-294.43e-28
phylumFirmicutes0.2546.17e-291.53e-27
genusAnaerotruncus0.2441.01e-262.38e-25
familyBacteroidales_noname0.2364.1e-258.41e-24
genusBacteroidales_noname0.2364.1e-258.41e-24
speciesBacteroidales_bacterium_ph80.2364.1e-258.41e-24
familyOxalobacteraceae0.2356.33e-251.17e-23
genusOxalobacter0.2356.42e-251.17e-23
speciesOxalobacter_formigenes0.2356.42e-251.17e-23
speciesMethanobrevibacter_unclassified0.2331.55e-242.71e-23
genusCoprococcus0.2331.9e-243.2e-23
familyBacteroidaceae-0.238.39e-241.32e-22
genusBacteroides-0.238.39e-241.32e-22
speciesRuminococcus_gnavus-0.2222.82e-224.29e-21
phylumVerrucomicrobia0.2053.9e-194.98e-18
classVerrucomicrobiae0.2053.9e-194.98e-18
orderVerrucomicrobiales0.2053.9e-194.98e-18
familyVerrucomicrobiaceae0.2053.9e-194.98e-18
genusAkkermansia0.2053.9e-194.98e-18
speciesAkkermansia_muciniphila0.2053.9e-194.98e-18
genusPseudoflavonifractor0.2021.01e-181.22e-17
speciesPseudoflavonifractor_capillosus0.2021.01e-181.22e-17
classErysipelotrichia0.2011.68e-181.89e-17
orderErysipelotrichales0.2011.68e-181.89e-17
familyErysipelotrichaceae0.2011.68e-181.89e-17
speciesRuminococcus_obeum0.1952.03e-172.23e-16
speciesEubacterium_biforme0.1925.08e-175.45e-16
speciesMitsuokella_unclassified0.1926.51e-176.83e-16
genusMitsuokella0.191.13e-161.16e-15
genusDesulfovibrio0.191.26e-161.27e-15
genusErysipelotrichaceae_noname0.1891.55e-161.52e-15
speciesCollinsella_aerofaciens0.1858.17e-167.87e-15
familyLachnospiraceae0.1831.75e-151.65e-14
speciesCoprococcus_sp_ART55_10.1821.89e-151.75e-14
genusCollinsella0.1812.92e-152.65e-14
genusBarnesiella0.1813.07e-152.68e-14
speciesBarnesiella_intestinihominis0.1813.07e-152.68e-14
genusButyrivibrio0.1813.5e-153e-14
speciesOlsenella_unclassified0.1813.64e-153.07e-14
speciesDorea_longicatena0.1771.39e-141.15e-13
speciesEubacterium_hallii0.1743.99e-143.25e-13
speciesRoseburia_hominis0.1735.07e-144.06e-13
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1691.8e-131.42e-12
speciesBifidobacterium_adolescentis0.1673.91e-133.03e-12
genusOlsenella0.1664.98e-133.79e-12
speciesAlistipes_shahii0.1665.65e-134.23e-12
speciesAlistipes_indistinctus0.1649.96e-137.35e-12
speciesCoprococcus_comes0.1631.3e-129.44e-12
genusFaecalibacterium0.1621.67e-121.18e-11
speciesFaecalibacterium_prausnitzii0.1621.67e-121.18e-11
orderCoriobacteriales0.1612.14e-121.46e-11
familyCoriobacteriaceae0.1612.14e-121.46e-11
speciesButyrivibrio_crossotus0.1594.56e-123.07e-11
genusDorea0.1594.9e-123.26e-11
speciesBacteroides_ovatus-0.1577.58e-124.97e-11
speciesLachnospiraceae_bacterium_7_1_58FAA0.1551.46e-119.44e-11
speciesClostridium_leptum0.1542e-111.28e-10
speciesRuminococcus_lactaris0.1542.41e-111.52e-10
speciesClostridium_sp_L2_500.1523.89e-112.42e-10
speciesEubacterium_ramulus0.1514.82e-112.95e-10
speciesDesulfovibrio_piger0.1514.88e-112.95e-10
speciesLachnospiraceae_bacterium_3_1_46FAA0.1471.6e-109.56e-10
speciesCoprobacillus_unclassified-0.1443.48e-102.05e-09
speciesEubacterium_eligens0.1443.78e-102.2e-09
classDeltaproteobacteria0.1435e-102.81e-09
orderDesulfovibrionales0.1435e-102.81e-09
familyDesulfovibrionaceae0.1435e-102.81e-09
phylumActinobacteria0.1411.01e-095.54e-09
classActinobacteria0.1411.01e-095.54e-09
genusRuminococcaceae_noname0.1391.69e-099.06e-09
speciesRuminococcaceae_bacterium_D160.1391.69e-099.06e-09
speciesDorea_formicigenerans0.1321.08e-085.73e-08
speciesAlistipes_onderdonkii0.1311.44e-087.55e-08
speciesRuminococcus_bromii0.131.69e-088.77e-08
speciesEubacterium_ventriosum0.1292.25e-081.15e-07
speciesCoprococcus_eutactus0.1292.42e-081.23e-07
speciesRuminococcus_champanellensis0.1273.31e-081.66e-07
genusEubacterium0.1273.78e-081.88e-07
familyEubacteriaceae0.1273.9e-081.92e-07
speciesAlistipes_finegoldii0.1264.46e-082.17e-07
genusAdlercreutzia0.1264.67e-082.23e-07
speciesAdlercreutzia_equolifaciens0.1264.67e-082.23e-07
familyPeptostreptococcaceae0.1239.1e-084.3e-07
orderEnterobacteriales0.1221.15e-075.32e-07
familyEnterobacteriaceae0.1221.15e-075.32e-07
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.1211.64e-077.52e-07
speciesErysipelotrichaceae_bacterium_21_30.122e-079.08e-07
genusOdoribacter0.1192.66e-071.2e-06
speciesClostridium_bartlettii0.1182.82e-071.26e-06
genusRuminococcus0.1183.02e-071.33e-06
genusCoprobacter0.1183.27e-071.42e-06
speciesCoprobacter_fastidiosus0.1183.27e-071.42e-06
speciesLachnospiraceae_bacterium_2_1_58FAA-0.1183.35e-071.42e-06
genusCoprobacillus-0.1183.36e-071.42e-06
speciesKlebsiella_sp_MS_92_30.1183.37e-071.42e-06
genusPeptostreptococcaceae_noname0.1173.91e-071.63e-06
speciesRuminococcus_callidus0.1164.8e-071.99e-06
speciesBacteroides_vulgatus-0.1147.47e-073.07e-06
phylumProteobacteria0.1148.3e-073.38e-06
genusMethanosphaera0.1139.87e-073.95e-06
speciesMethanosphaera_stadtmanae0.1139.87e-073.95e-06
speciesOscillibacter_unclassified0.1121.11e-064.4e-06
genusLachnospiraceae_noname0.1121.31e-065.15e-06
familyOscillospiraceae0.111.91e-067.39e-06
genusOscillibacter0.111.91e-067.39e-06
speciesEggerthella_unclassified-0.112e-067.67e-06
speciesAnaerostipes_hadrus0.1092.09e-067.96e-06
familyRikenellaceae0.1092.44e-069.14e-06
genusAlistipes0.1092.44e-069.14e-06
speciesEscherichia_unclassified0.1092.53e-069.4e-06
genusEggerthella-0.1092.57e-069.48e-06
speciesLachnospiraceae_bacterium_1_4_56FAA-0.1083.1e-061.13e-05
speciesRuminococcus_torques0.1054.99e-061.81e-05
speciesLactococcus_phage_P6800.1055.49e-061.98e-05
speciesLachnospiraceae_bacterium_6_1_63FAA-0.1055.78e-062.07e-05
speciesAlistipes_sp_AP110.1046.95e-062.47e-05
speciesKlebsiella_pneumoniae0.1011.23e-054.33e-05
speciesClostridium_bolteae-0.1011.26e-054.41e-05
speciesOdoribacter_splanchnicus0.11.41e-054.89e-05
speciesClostridium_ramosum-0.0982.09e-057.2e-05
orderBifidobacteriales0.0982.27e-057.71e-05
familyBifidobacteriaceae0.0982.27e-057.71e-05
genusBifidobacterium0.0972.41e-058.13e-05
speciesKlebsiella_oxytoca0.0963.05e-050.000102
speciesBacteroides_stercoris-0.0963.08e-050.000102
genusPhascolarctobacterium0.0963.17e-050.000103
speciesClostridium_clostridioforme-0.0963.17e-050.000103
speciesPhascolarctobacterium_succinatutens0.0963.17e-050.000103
speciesDesulfovibrio_desulfuricans0.0953.59e-050.000116
genusKlebsiella0.0953.84e-050.000123
speciesBilophila_wadsworthia0.0944.95e-050.000158
genusEnterobacter0.0935.18e-050.000164
genusCatenibacterium0.0927.09e-050.000222
speciesCatenibacterium_mitsuokai0.0927.09e-050.000222
speciesEubacterium_dolichum-0.0917.97e-050.000247
genusFlavonifractor-0.0918.09e-050.000248
speciesFlavonifractor_plautii-0.0918.09e-050.000248
genusHoldemania0.0918.79e-050.000268
speciesEnterobacter_cloacae0.098.9e-050.000269
speciesParaprevotella_unclassified0.099.66e-050.00029
genusParaprevotella0.090.0001020.000305
genusPantoea0.0880.0001280.000378
speciesPantoea_unclassified0.0880.0001280.000378
genusBlautia0.0880.000140.00041
speciesAnaerostipes_unclassified-0.0880.0001410.000411
classGammaproteobacteria0.0870.0001580.000458
speciesBacteroides_pectinophilus0.0870.0001670.000481
speciesBacteroides_thetaiotaomicron-0.0870.0001750.000501
genusClostridiaceae_noname-0.0860.0001890.000534
speciesClostridiaceae_bacterium_JC118-0.0860.0001890.000534
speciesBacteroides_xylanisolvens-0.0860.0001970.000553
speciesEggerthella_lenta-0.0850.0002160.000603
familyAcidaminococcaceae0.0850.0002490.000691
speciesBacteroides_cellulosilyticus0.0840.0002560.000707
speciesParaprevotella_clara0.0830.0003170.00087
speciesBacteroides_caccae0.0830.0003210.000876
genusBilophila0.0830.0003520.000955
familyLeuconostocaceae0.0820.0003580.000966
phylumViruses_noname0.0820.000370.000984
classViruses_noname0.0820.000370.000984
speciesEubacterium_rectale0.0820.0003710.000984
genusAnaerostipes0.0820.0004020.00106
speciesBacteroides_sp_2_1_22-0.0810.0004250.00111
genusLactococcus0.0810.0004640.00121
speciesBlautia_producta-0.080.0005110.00133
speciesSubdoligranulum_sp_4_3_54A2FAA0.080.0005260.00136
speciesHoldemania_filiformis0.080.0005390.00138
speciesBilophila_unclassified0.0790.000580.00148
speciesClostridium_citroniae-0.0790.0006590.00167
genusGordonibacter0.0780.0006840.00172
speciesGordonibacter_pamelaeae0.0780.0006840.00172
speciesBifidobacterium_longum0.0780.0007390.00185
speciesParaprevotella_xylaniphila0.0780.0007870.00196
orderActinomycetales0.0760.0009990.00246
speciesHoldemania_unclassified0.0760.0010.00246
speciesPorphyromonas_uenonis0.0760.001050.00257
genusButyricimonas0.0760.001070.00259
speciesButyricimonas_synergistica0.0760.001070.00259
speciesEnterobacter_aerogenes0.0750.001120.0027
speciesLactococcus_garvieae0.0750.001140.00273
speciesAlistipes_putredinis0.0750.001150.00274
familyFusobacteriaceae-0.0750.001160.00275
phylumFusobacteria-0.0750.001230.00287
classFusobacteriia-0.0750.001230.00287
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genusPorphyromonas0.0740.001280.00298
genusFusobacterium-0.0740.001380.00319
orderCaudovirales0.0740.001390.0032
speciesVeillonella_atypica-0.0740.00140.00321
speciesLachnospiraceae_bacterium_5_1_57FAA-0.0740.001450.00331
genusEscherichia0.0730.001540.00349
speciesFusobacterium_varium-0.0730.00160.00361
genusClostridium0.0720.00190.00427
speciesBacteroides_fragilis-0.0720.001930.00432
familyClostridiaceae0.0710.001980.00441
speciesFusobacterium_mortiferum-0.0710.002060.00456
speciesParabacteroides_merdae0.0710.002260.00498
speciesClostridium_symbiosum-0.070.002440.00536
speciesErysipelotrichaceae_bacterium_6_1_450.070.002470.0054
speciesMitsuokella_multacida0.0690.002970.00646
speciesParabacteroides_unclassified-0.0680.003190.00691
speciesBacteroides_eggerthii0.0660.004110.00886
speciesCitrobacter_freundii0.0650.004940.0106
speciesClostridiales_bacterium_1_7_47FAA-0.0650.005080.0108
familySiphoviridae0.0640.005370.0114
speciesClostridium_sp_ATCC_BAA_442-0.0640.00580.0123
speciesButyrivibrio_unclassified0.0630.006080.0128
genusVeillonella-0.0630.006210.013
speciesAcidaminococcus_fermentans0.0630.00660.0138
speciesEubacterium_cylindroides0.0630.006650.0138
genusLeuconostoc0.0630.00680.014
speciesErysipelotrichaceae_bacterium_3_1_53-0.0630.006810.014
speciesParabacteroides_sp_D130.0620.007140.0146
genusCitrobacter0.0620.007150.0146
speciesStreptococcus_thermophilus0.0620.007230.0147
speciesCitrobacter_unclassified0.0620.007260.0147
speciesOdoribacter_laneus0.0620.007450.015
speciesLactococcus_lactis0.0610.008420.0169
speciesLactococcus_phage_jm20.0610.008840.0177
speciesWeissella_cibaria0.060.008960.0178
genusParabacteroides-0.060.008990.0178
speciesBifidobacterium_catenulatum0.060.009090.018
speciesBacteroides_intestinalis0.060.009750.0192
speciesSutterella_parvirubra-0.0590.01060.0208
speciesEscherichia_coli0.0580.01190.0232
speciesPorphyromonas_asaccharolytica0.0580.01260.0245
speciesVeillonella_dispar-0.0570.0130.0251
genusSiphoviridae_noname0.0570.01340.0258
genusMegasphaera-0.0570.01350.0259
speciesDialister_succinatiphilus0.0570.01390.0266
speciesWeissella_confusa0.0570.01440.0274
speciesAlistipes_sp_HGB50.0560.01560.0296
speciesPeptostreptococcaceae_noname_unclassified0.0550.01690.0319
speciesLachnospiraceae_bacterium_2_1_46FAA-0.0550.01730.0325
genusHaemophilus-0.0550.01740.0326
speciesMegamonas_rupellensis-0.0550.01810.0338
speciesSutterella_wadsworthensis0.0550.01830.034
speciesVeillonella_parvula-0.0550.01840.0341
genusTuricibacter0.0540.01880.0346
speciesDorea_unclassified-0.0540.01890.0346
speciesHaemophilus_parainfluenzae-0.0540.01890.0346
orderPasteurellales-0.0530.0210.0381
familyPasteurellaceae-0.0530.0210.0381
speciesMegasphaera_micronuciformis-0.0510.02650.0479
classBacilli0.0510.02790.0503
speciesParabacteroides_goldsteinii0.0510.02880.0517
speciesTuricibacter_unclassified0.050.02930.0524
orderLactobacillales0.050.03130.0557
speciesLactococcus_phage_phi70.050.03150.0559
speciesLachnospiraceae_bacterium_1_1_57FAA0.050.03170.056
speciesEubacterium_sp_3_1_31-0.050.03190.0562
familyActinomycetaceae0.0490.03340.0586
speciesCollinsella_unclassified-0.0490.03350.0586
speciesBacteroides_salyersiae0.0490.03510.0611
genusWeissella0.0480.03620.0628
speciesFusobacterium_nucleatum-0.0480.03870.0669
familyStreptococcaceae0.0470.04120.071
speciesLachnospiraceae_bacterium_5_1_63FAA0.0470.04190.0719
speciesMegamonas_unclassified-0.0470.04270.073
genusMegamonas-0.0470.04290.0731
speciesVeillonella_unclassified-0.0460.04650.0789
speciesStreptococcus_australis0.0460.0490.0829
genusTunalikevirus0.0450.05380.0907
speciesBacteroides_fluxus-0.0440.05890.0989
speciesBifidobacterium_angulatum0.0430.06140.103
speciesCoprobacillus_sp_29_10.0430.06290.105
genusLambdalikevirus0.0430.06370.106
speciesClostridium_nexile-0.0430.06480.107
genusActinomyces0.0430.06540.108
speciesLactobacillus_ruminis0.0420.06960.114
genusSutterella0.0420.07160.117
speciesTuricibacter_sanguinis0.0410.07520.123
speciesKlebsiella_phage_KP360.0410.07610.124
genusProteus0.0410.07690.125
familyViruses_noname0.0410.07860.127
genusViruses_noname0.0410.07860.127
speciesClostridium_perfringens0.040.08150.131
genusRoseburia0.040.08320.133
speciesC2likevirus_unclassified0.040.08340.133
speciesBacteroides_clarus0.0390.08850.141
genusC2likevirus0.0390.09210.145
speciesPeptostreptococcus_anaerobius0.0390.09210.145
familyVeillonellaceae-0.0390.0940.148
speciesRoseburia_unclassified0.0390.09560.15
speciesParabacteroides_sp_20_30.0380.09640.151
speciesBifidobacterium_dentium0.0380.09940.155
genusEnterococcus0.0380.10.155
speciesLactobacillus_amylovorus-0.0380.1010.156
speciesMegasphaera_unclassified-0.0380.1030.159
speciesCampylobacter_concisus-0.0370.1050.161
speciesBacteroides_coprocola0.0380.1050.161
genusCoriobacteriaceae_noname0.0370.1090.166
genusParasutterella0.0370.110.167
speciesParasutterella_excrementihominis0.0370.110.167
speciesBacteroides_barnesiae0.0370.1110.168
genusDialister0.0370.1130.169
speciesBacteroides_sp_3_1_190.0370.1130.169
speciesAcidaminococcus_unclassified-0.0370.1130.169
speciesBifidobacterium_animalis0.0370.1140.17
speciesRuminococcus_sp_5_1_39BFAA0.0360.1160.173
speciesLeuconostoc_lactis0.0360.1170.174
familyEnterococcaceae0.0360.120.178
familyPropionibacteriaceae-0.0360.1230.181
genusStreptococcus0.0350.1260.185
orderViruses_noname0.0350.1310.192
speciesCoriobacteriaceae_bacterium_phI0.0350.1340.196
genusActinobacillus-0.0340.1380.2
speciesActinobacillus_unclassified-0.0340.1380.2
speciesLactobacillus_rhamnosus-0.0340.140.203
speciesLactobacillus_salivarius-0.0340.1410.204
speciesPropionibacterium_freudenreichii0.0340.1420.204
speciesBacteroides_coprophilus0.0330.1580.227
speciesEnterococcus_faecalis0.0320.1640.233
phylumSynergistetes0.0320.1650.233
classSynergistia0.0320.1650.233
orderSynergistales0.0320.1650.233
familySynergistaceae0.0320.1650.233
speciesMegamonas_hypermegale-0.0320.1720.242
genusStaphylococcus0.0320.1730.243
speciesGemella_morbillorum0.0310.1770.248
speciesHaemophilus_sputorum-0.0310.1780.249
speciesBlautia_hydrogenotrophica-0.0310.1850.258
speciesStreptococcus_mitis_oralis_pneumoniae-0.030.1890.262
familyPrevotellaceae0.030.190.263
speciesLactobacillus_mucosae-0.030.1970.272
speciesLactobacillus_fermentum-0.0290.2060.283
speciesStreptococcus_mutans-0.0290.2070.284
speciesHaemophilus_paraphrohaemolyticus-0.0280.2240.306
speciesBacteroides_oleiciplenus0.0280.2320.316
speciesLactobacillus_gasseri-0.0280.2320.316
speciesOscillibacter_sp_KLE_1728-0.0270.2410.327
speciesStreptococcus_salivarius0.0270.2440.33
speciesClostridium_spiroforme-0.0270.2480.334
familyMyoviridae0.0260.2690.362
familyPodoviridae0.0250.2730.366
speciesPrevotella_buccae-0.0250.2750.368
speciesStreptococcus_infantarius0.0250.2780.371
speciesClostridium_asparagiforme0.0250.2850.379
speciesStreptococcus_parasanguinis0.0250.2860.379
speciesMegasphaera_elsdenii0.0240.2940.389
speciesStreptococcus_sanguinis-0.0240.3060.402
speciesBacteroides_finegoldii0.0240.3060.402
speciesPeptostreptococcus_stomatis0.0230.3210.42
speciesLactobacillus_crispatus-0.0230.3220.42
genusBurkholderiales_noname0.0230.3230.42
speciesBurkholderiales_bacterium_1_1_470.0230.3230.42
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0230.3240.42
speciesPrevotella_copri0.0230.3250.42
familyBurkholderiales_noname0.0220.3430.442
speciesEnterobacteria_phage_HK5440.0220.3440.442
familyStaphylococcaceae0.0220.3460.444
familyPorphyromonadaceae0.0220.3520.45
speciesMegamonas_funiformis-0.0210.3580.457
speciesStreptococcus_vestibularis-0.0210.3660.466
genusMorganella0.0210.3740.473
speciesMorganella_morganii0.0210.3740.473
speciesBacteroides_uniformis-0.020.3780.477
speciesHoldemania_sp_AP20.020.3820.481
genusButyricicoccus-0.020.3910.49
speciesButyricicoccus_pullicaecorum-0.020.3910.49
familyCampylobacteraceae0.0190.4220.526
speciesEubacterium_limosum0.0190.4220.526
speciesAcidaminococcus_intestini-0.0180.4250.528
speciesLactobacillus_oris-0.0180.4260.528
speciesClostridium_hathewayi0.0180.4460.551
speciesErysipelotrichaceae_bacterium_2_2_44A0.0180.4470.551
speciesLactobacillus_plantarum0.0170.4590.564
speciesLactobacillus_delbrueckii0.0170.4610.565
speciesBifidobacterium_breve-0.0170.4720.577
speciesCoprobacillus_sp_D60.0160.4770.582
genusParvimonas0.0160.4820.585
speciesParvimonas_unclassified0.0160.4820.585
familySuccinivibrionaceae-0.0150.520.629
speciesLactobacillus_acidophilus0.0150.5260.635
genusPyramidobacter0.0140.5330.64
speciesPyramidobacter_piscolens0.0140.5330.64
genusClostridiales_noname-0.0140.5380.645
speciesStreptococcus_gordonii-0.0140.5410.646
speciesStreptococcus_lutetiensis-0.0140.5440.648
speciesRothia_mucilaginosa0.0140.5450.648
speciesStreptococcus_pasteurianus-0.0140.550.652
genusCampylobacter0.0140.5540.655
speciesBifidobacterium_bifidum0.0130.5610.662
genusSolobacterium0.0130.5650.663
speciesSolobacterium_moorei0.0130.5650.663
speciesParabacteroides_johnsonii0.0130.5660.663
speciesLactobacillus_vaginalis-0.0130.5720.668
genusAcidaminococcaceae_unclassified0.0130.5740.669
genusPrevotella0.0130.5790.673
genusAggregatibacter-0.0130.5880.68
genusSuccinatimonas-0.0120.5890.68
speciesSuccinatimonas_hippei-0.0120.5890.68
genusPeptostreptococcus0.0120.5910.68
classEpsilonproteobacteria0.0120.5990.685
orderCampylobacterales0.0120.5990.685
speciesKlebsiella_unclassified0.0120.5990.685
speciesBifidobacterium_pseudocatenulatum-0.0120.6090.692
familyBacillales_noname-0.0120.610.692
genusGemella-0.0120.610.692
speciesEnterococcus_faecium0.0110.6260.709
speciesBacteroides_faecis-0.0110.6280.709
genusRothia0.0110.630.71
speciesPrevotella_bivia-0.0110.6340.712
speciesProteus_mirabilis0.0110.640.718
speciesOdoribacter_unclassified0.0110.6440.72
familyMicrococcaceae0.0110.6470.722
speciesLactobacillus_casei_paracasei0.010.6620.737
genusSutterellaceae_unclassified0.010.6740.749
genusPropionibacterium-0.010.6770.75
speciesBacteroides_salanitronis0.0090.6880.761
speciesRoseburia_inulinivorans0.0090.690.761
genusSlackia-0.0080.7160.786
speciesFusobacterium_ulcerans-0.0080.7160.786
orderBacillales-0.0080.7320.802
speciesLactococcus_phage_bIL67-0.0070.7470.814
speciesPrevotella_stercorea0.0070.7470.814
speciesRoseburia_intestinalis0.0070.7490.815
familyClostridiales_noname0.0070.7540.818
speciesOscillibacter_sp_KLE_1745-0.0070.7590.822
speciesDialister_invisus0.0070.7680.83
speciesStreptococcus_anginosus-0.0060.7840.845
genusPeptoniphilus0.0060.7860.845
speciesLactobacillus_reuteri0.0060.7910.849
speciesParabacteroides_distasonis-0.0060.80.856
speciesBacteroides_massiliensis0.0060.8030.857
speciesCollinsella_tanakaei-0.0060.8040.857
speciesBacteroides_nordii-0.0050.8170.869
orderBurkholderiales-0.0050.8250.875
familyClostridiales_Family_XI_Incertae_Sedis0.0050.8320.881
speciesBacteroides_plebeius0.0050.840.887
genusMyoviridae_noname-0.0050.8440.889
speciesBacteroides_dorei-0.0040.8540.897
orderPseudomonadales-0.0040.8550.897
speciesAggregatibacter_segnis-0.0040.8620.902
genusAcidaminococcus0.0040.8670.905
classNegativicutes-0.0040.8740.907
orderSelenomonadales-0.0040.8740.907
genusLactobacillus0.0040.8740.907
speciesLactobacillus_sanfranciscensis-0.0040.8770.908
speciesRuminococcus_sp_JC304-0.0030.8930.92
classBetaproteobacteria-0.0030.8940.92
speciesStreptococcus_phage_Sfi210.0030.8950.92
speciesSlackia_piriformis-0.0030.8980.921
familySutterellaceae-0.0030.9020.923
speciesEggerthella_sp_1_3_56FAA0.0030.9050.923
speciesClostridium_sp_KLE_1755-0.0030.9050.923
speciesAlistipes_unclassified-0.0020.9180.934
speciesBacteroides_sp_1_1_6-0.0020.9380.952
speciesBacteroides_sp_4_3_47FAA0.0010.9570.969
speciesLactococcus_phage_936_sensu_lato0.0010.960.97
orderAeromonadales0.0010.9680.976
familyLactobacillaceae0.0010.9770.983
speciesAnaerotruncus_colihominis0.0010.9830.987
speciesLachnospiraceae_bacterium_8_1_57FAA0.00.9870.989
speciesCollinsella_intestinalis0.01.01.0
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.0352468235730.02418994957930.00353578134872612720.3724
Liver cirrhosisChina1201140.03113281445910.02650217717750.1107260830071703757.2307
ObesityDenmark1691230.02720685883610.03082708576740.1737416344751010533.2281
Type II diabetesChina1831850.0238822357180.02877591803320.1955000094841310943.3226
Type II diabetesSweden53920.03248892577630.03609354758780.216486173319765625.9262
Type II diabetesDenmark752770.03000329414470.02808966077480.4455762097491923363.0445
Rheumatoid arthritisChina127980.0338253589130.03220488408190.5239937115891818060.6263
Colorectal cancerAustria64350.02947363371540.03583775730510.7557488147462426982.1119
Ulcerative colitisSpain78660.02405633433590.02418994957930.8218349967932618486.3759
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382