MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:16:46 PST
Job id & description: 2401, purine21
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
MH0071_GL00450863899652CompleteK03784COG0813FirmicutesBlautia100.0100.0100.0
O2.CD1-0-PT_GL01351773908202CompleteK03784COG0813FirmicutesBlautia100.0100.0100.0
556263.FSEG_002683918365CompleteK03784COG0813FusobacteriaFusobacterium100.0100.0100.0
MH0088_GL00425813899880CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0377_GL00954163926187Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
706433.HMPREF9430_013063898335CompleteK03784COG0813FirmicutesSolobacterium100.0100.0100.0
MH0012_GL02205853918988CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0370_GL00468603905656CompleteK03784COG0813unknownunknown100.0100.0100.0
742820.HMPREF9459_002023918457CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
MH0069_GL00003233899614CompleteK03784COG0813FirmicutesRuminococcus100.0100.0100.0
MH0189_GL00323963942320CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD16-0_GL00695423930621CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI18_GL00846903932105CompleteK03784COG0813unknownunknown100.0100.0100.0
158458797-stool1_revised3916534Lack 3'-endK05810COG1496Proteobacteriaunknown100.0100.0100.0
467705.SGO_12603918132CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
545696.HOLDEFILI_037863938741CompleteK03784COG0813FirmicutesHoldemania100.0100.0100.0
888825.HMPREF9398_12063918483CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
V1.CD11-0_GL00440593930544CompleteK03784COG0813FusobacteriaFusobacterium100.0100.0100.0
V1.FI17_GL01833243911762CompleteK03784COG0813unknownunknown100.0100.0100.0
864570.HMPREF9189_09663938870CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
MH0293_GL01169273904121CompleteK03784COG0813unknownunknown100.0100.0100.0
N056A_GL00089123935077Lack 5'-endK03784COG0813FirmicutesStreptococcus100.0100.0100.0
NLM023_GL00383213934433CompleteK03784COG0813FusobacteriaFusobacterium100.0100.0100.0
O2.UC47-1_GL02043943909597CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD17-4_GL00903703930648CompleteK03784COG0813FusobacteriaFusobacterium100.0100.0100.0
V1.UC17-2_GL00979233912487CompleteK03784COG0813unknownunknown100.0100.0100.0
159753524-stool1_revised3937431CompleteK03784COG0813unknownunknown100.0100.0100.0
435842.HMPREF0848_006013938640CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
445971.ANASTE_022413898143CompleteK03784COG0813FirmicutesAnaerofustis100.0100.0100.0
521000.PROVRETT_084933898218CompleteK03784COG0813ProteobacteriaProvidencia100.0100.0100.0
888048.HMPREF8577_04593938886CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
905067.HMPREF9626_11443938899CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
MH0003_GL00457873918572CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
MH0126_GL00253343920795CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD55-0_GL01247763911081CompleteK03784COG0813unknownunknown100.0100.0100.0
411467.BACCAP_014703938623CompleteK03784COG0813FirmicutesPseudoflavonifractor100.0100.0100.0
763820215-stool1_revised3937918Lack 5'-endK03784COG0813FirmicutesRuminococcus100.0100.0100.0
MH0096_GL00529923940541CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0233_GL01133473943326CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0250_GL02050153943656CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0277_GL00179983924046CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0277_GL00210873903859CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
MH0277_GL00254313944309CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
O2.CD1-0_GL01492553928525CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
SZEY-81A_GL00664613935412CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD38-0_GL00355693931102CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
160765029-stool1_revised3917308CompleteK03784COG0813unknownunknown100.0100.0100.0
562983.HMPREF0433_013543938796CompleteK03784COG0813FirmicutesGemella100.0100.0100.0
MH0149_GL00959423941674CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0250_GL02185393943660CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0333_GL01157213924989CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC11-2_GL00449143928764CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC41-1_GL01352423929776CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
O2.UC50-2_GL00437413930157CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD1-0-PN_GL00956023930516CompleteK03784COG0813unknownunknown100.0100.0100.0
764285508-stool1_revised3938144CompleteK03784COG0813FirmicutesTuricibacter100.0100.0100.0
MH0212_GL00736273902507CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0252_GL01314283943729CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0012_GL01912933939382CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0012_GL02230103939400CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0189_GL00033393942305CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0203_GL02006093942795CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0217_GL00521163922724CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0262_GL01252203943951CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0420_GL00940873927381CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0420_GL01127673927383CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0448_GL01730993928261CompleteK03784COG0813FirmicutesMitsuokella100.0100.0100.0
O2.UC48-0_GL00096073909631CompleteK03784COG0813unknownunknown100.0100.0100.0
158337416-stool1_revised3936754CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
MH0087_GL00203043940349CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0100_GL00069093920243CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0176_GL00884353901632CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0354_GL00034703925399CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0100_GL00493353900184CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0174_GL01340643921741CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0409_GL01817943906755CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0437_GL01311233927927CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-46A_GL00176753916432Lack 5'-endK03784COG0813ProteobacteriaKlebsiella100.0100.0100.0
908339.HMPREF9265_02943938902CompleteK03784COG0813FirmicutesLactobacillus100.0100.0100.0
MH0006_GL01620543939141CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0277_GL00433263944328CompleteK03784COG0813FirmicutesEnterococcus100.0100.0100.0
MH0400_GL00200563926763CompleteK03784COG0813FirmicutesLactobacillus100.0100.0100.0
457403.HMPREF0401_012643938667CompleteK03784COG0813FusobacteriaFusobacterium100.0100.0100.0
521095.Apar_01413938561CompleteK03784COG0813ActinobacteriaAtopobium100.0100.0100.0
MH0277_GL00527123944340CompleteK03784COG0813FirmicutesEnterococcus100.0100.0100.0
O2.UC34-2_GL00805933909202CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI24_GL00729863932178CompleteK03784COG0813FirmicutesSelenomonas100.0100.0100.0
290338.CKO_001183918084CompleteK00757COG2820ProteobacteriaCitrobacter100.0100.0100.0
MH0118_GL00396303920627CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0277_GL00029213924030CompleteK05810COG1496unknownunknown100.0100.0100.0
T2D-62A_GL00564723936256CompleteK03784COG0813ActinobacteriaAtopobium100.0100.0100.0
MH0038_GL00523963919311CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0286_GL01464443944462CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0038_GL00503943939718CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0122_GL00236993941027CompleteK03784COG0813FirmicutesMegasphaera100.0100.0100.0
MH0192_GL00066873942448CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0126_GL01362493920840CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0035_GL00088563939662CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0083_GL00919773940313CompleteK03784COG0813FirmicutesMegasphaera100.0100.0100.0
DLM013_GL00768183933958Lack 3'-endK03783COG1683;COG0005Actinobacteriaunknown100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
phylumBacteroidetes-0.597.37e-1761.16e-173
classBacteroidia-0.597.38e-1761.16e-173
orderBacteroidales-0.597.38e-1761.16e-173
phylumFirmicutes0.4858.46e-1119.98e-109
speciesRuminococcus_obeum0.4823.41e-1093.22e-107
orderCoriobacteriales0.4781.64e-1071.11e-105
familyCoriobacteriaceae0.4781.64e-1071.11e-105
phylumActinobacteria0.4762.07e-1061.09e-104
classActinobacteria0.4762.07e-1061.09e-104
genusBlautia0.4694.64e-1032.19e-101
speciesRuminococcus_sp_5_1_39BFAA0.4541.53e-956.57e-94
genusDorea0.4411.24e-894.88e-88
speciesEubacterium_hallii0.4381.81e-886.57e-87
classClostridia0.4362e-876.29e-86
orderClostridiales0.4362e-876.29e-86
classBacilli0.4088.34e-762.46e-74
familyStreptococcaceae0.4064.89e-751.36e-73
orderLactobacillales0.4042.33e-746.11e-73
genusStreptococcus0.46.44e-731.6e-71
familyLachnospiraceae0.3941.87e-704.41e-69
orderBifidobacteriales0.3861.74e-673.73e-66
familyBifidobacteriaceae0.3861.74e-673.73e-66
genusRuminococcus0.3846.82e-671.4e-65
familyActinomycetaceae0.3841.04e-662.05e-65
genusBifidobacterium0.3831.43e-662.7e-65
familyBacteroidaceae-0.3832.54e-664.44e-65
genusBacteroides-0.3832.54e-664.44e-65
genusActinomyces0.3824.89e-668.24e-65
familyRuminococcaceae0.3752.42e-633.94e-62
genusAnaerostipes0.3712.88e-624.53e-61
orderActinomycetales0.3713.98e-626.06e-61
speciesRuminococcus_torques0.363.18e-584.69e-57
speciesAnaerostipes_hadrus0.3566.95e-579.94e-56
speciesDorea_formicigenerans0.3551.66e-562.3e-55
speciesDorea_longicatena0.3534.79e-566.46e-55
speciesStreptococcus_thermophilus0.3378.38e-511.1e-49
speciesStreptococcus_salivarius0.331.02e-481.3e-47
speciesLachnospiraceae_bacterium_5_1_63FAA0.3222.28e-462.83e-45
speciesBifidobacterium_longum0.3192.18e-452.64e-44
genusCollinsella0.3182.65e-453.13e-44
familyBacillales_noname0.3177.57e-458.51e-44
genusGemella0.3177.57e-458.51e-44
speciesStreptococcus_parasanguinis0.3034.64e-415.09e-40
orderBacillales0.3021.13e-401.21e-39
speciesStreptococcus_sanguinis0.33.91e-404.1e-39
speciesCoprococcus_comes0.2972.74e-392.81e-38
familyPeptostreptococcaceae0.2963.06e-393.07e-38
speciesCollinsella_aerofaciens0.2956.67e-396.56e-38
genusLachnospiraceae_noname0.2941.19e-381.15e-37
genusCoprococcus0.2923.61e-383.41e-37
genusParabacteroides-0.285.74e-355.31e-34
classErysipelotrichia0.286.51e-355.69e-34
orderErysipelotrichales0.286.51e-355.69e-34
familyErysipelotrichaceae0.286.51e-355.69e-34
genusPeptostreptococcaceae_noname0.2797.07e-356.07e-34
speciesCoprococcus_catus0.2751.05e-338.85e-33
genusAdlercreutzia0.2732.07e-331.68e-32
speciesAdlercreutzia_equolifaciens0.2732.07e-331.68e-32
genusSolobacterium0.271.04e-328.18e-32
speciesSolobacterium_moorei0.271.04e-328.18e-32
genusRothia0.2611.54e-301.19e-29
genusGordonibacter0.2611.65e-301.24e-29
speciesGordonibacter_pamelaeae0.2611.65e-301.24e-29
familyMicrococcaceae0.2611.97e-301.45e-29
speciesEubacterium_ramulus0.2553.19e-292.32e-28
speciesStreptococcus_gordonii0.2554.77e-293.41e-28
speciesStreptococcus_vestibularis0.2481.17e-278.24e-27
speciesBacteroides_xylanisolvens-0.2472.33e-271.62e-26
speciesBacteroides_thetaiotaomicron-0.2463.42e-272.34e-26
speciesBifidobacterium_adolescentis0.2456.54e-274.41e-26
genusSubdoligranulum0.2441.08e-267.18e-26
speciesErysipelotrichaceae_bacterium_21_30.2431.41e-269.24e-26
familyLactobacillaceae0.2422.64e-261.71e-25
speciesStreptococcus_mutans0.2414.71e-262.99e-25
speciesRothia_mucilaginosa0.2414.75e-262.99e-25
familyPorphyromonadaceae-0.2381.52e-259.44e-25
speciesSubdoligranulum_unclassified0.2363.89e-252.38e-24
genusLactobacillus0.2357.2e-254.36e-24
speciesEggerthella_lenta0.2341.23e-247.35e-24
speciesErysipelotrichaceae_bacterium_2_2_44A0.2315.2e-243.07e-23
genusErysipelotrichaceae_noname0.2291.39e-238.1e-23
speciesBacteroides_ovatus-0.2281.55e-238.92e-23
classBetaproteobacteria-0.2264.49e-232.55e-22
orderBurkholderiales-0.2257.96e-234.47e-22
familyEnterococcaceae0.2213.63e-222.02e-21
genusEnterococcus0.226.03e-223.31e-21
speciesStreptococcus_anginosus0.2172.7e-211.46e-20
speciesClostridium_leptum0.2162.97e-211.59e-20
familySutterellaceae-0.2154.47e-212.37e-20
speciesStreptococcus_mitis_oralis_pneumoniae0.2156.24e-213.26e-20
genusOlsenella0.2156.28e-213.26e-20
speciesLactobacillus_rhamnosus0.2113.33e-201.71e-19
genusPrevotella-0.214.1e-202.08e-19
genusEggerthella0.2089.02e-204.53e-19
speciesBifidobacterium_animalis0.2071.48e-197.35e-19
speciesClostridium_bartlettii0.2062.35e-191.16e-18
speciesBlautia_hydrogenotrophica0.2021.13e-185.5e-18
speciesBifidobacterium_dentium0.2011.94e-189.34e-18
genusPeptostreptococcus0.1993.11e-181.48e-17
speciesLactobacillus_delbrueckii0.1993.15e-181.49e-17
speciesBacteroides_vulgatus-0.1994e-181.87e-17
genusCoprobacillus0.1979.29e-184.3e-17
speciesStreptococcus_australis0.1942.98e-171.37e-16
speciesOlsenella_unclassified0.1933.51e-171.59e-16
speciesBacteroides_stercoris-0.1918.6e-173.87e-16
speciesCoprobacillus_unclassified0.191.2e-165.34e-16
speciesClostridium_ramosum0.1891.46e-166.38e-16
speciesEggerthella_unclassified0.1891.46e-166.38e-16
speciesLactobacillus_casei_paracasei0.1882.12e-169.18e-16
speciesBlautia_producta0.1873.78e-161.62e-15
speciesPropionibacterium_freudenreichii0.1874.25e-161.81e-15
speciesErysipelotrichaceae_bacterium_6_1_450.1858.46e-163.57e-15
speciesPrevotella_copri-0.1831.33e-155.56e-15
speciesLactococcus_lactis0.1812.85e-151.18e-14
genusPropionibacterium0.1813.45e-151.42e-14
speciesOdoribacter_splanchnicus-0.1796.44e-152.62e-14
phylumViruses_noname0.1787.8e-153.12e-14
classViruses_noname0.1787.8e-153.12e-14
speciesPeptostreptococcaceae_noname_unclassified0.1789.47e-153.76e-14
genusLeuconostoc0.1771.39e-145.42e-14
genusOdoribacter-0.1771.39e-145.42e-14
genusLactococcus0.1752.21e-148.55e-14
speciesRuminococcus_bromii0.1734.86e-141.86e-13
speciesEnterococcus_faecium0.1726.92e-142.63e-13
familyPrevotellaceae-0.1727.77e-142.93e-13
genusParvimonas0.1718.31e-143.1e-13
speciesParvimonas_unclassified0.1718.33e-143.1e-13
familyClostridiales_Family_XI_Incertae_Sedis0.1719.41e-143.47e-13
speciesLachnospiraceae_bacterium_1_4_56FAA0.1641.1e-124.02e-12
phylumVerrucomicrobia0.1631.37e-124.79e-12
classVerrucomicrobiae0.1631.37e-124.79e-12
orderVerrucomicrobiales0.1631.37e-124.79e-12
familyVerrucomicrobiaceae0.1631.37e-124.79e-12
genusAkkermansia0.1631.37e-124.79e-12
speciesAkkermansia_muciniphila0.1631.37e-124.79e-12
speciesGemella_morbillorum0.1621.64e-125.69e-12
familyEubacteriaceae0.1621.97e-126.79e-12
genusEubacterium0.1612.31e-127.9e-12
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1612.86e-129.68e-12
familySiphoviridae0.1612.87e-129.68e-12
genusMethanobrevibacter0.1585.5e-121.84e-11
speciesBacteroides_uniformis-0.1577.74e-122.57e-11
speciesParabacteroides_merdae-0.1561.06e-113.5e-11
classMethanobacteria0.1561.12e-113.62e-11
orderMethanobacteriales0.1561.12e-113.62e-11
familyMethanobacteriaceae0.1561.12e-113.62e-11
speciesMethanobrevibacter_smithii0.1551.59e-115.11e-11
speciesLachnospiraceae_bacterium_5_1_57FAA0.1551.61e-115.13e-11
phylumEuryarchaeota0.1551.64e-115.2e-11
genusClostridium0.1541.88e-115.92e-11
familyRikenellaceae-0.1532.81e-118.73e-11
genusAlistipes-0.1532.81e-118.73e-11
orderCaudovirales0.1523.56e-111.1e-10
familyClostridiaceae0.1524.17e-111.28e-10
speciesPeptostreptococcus_stomatis0.1515.21e-111.59e-10
speciesLactobacillus_gasseri0.1499.65e-112.92e-10
speciesEnterococcus_faecalis0.1481.23e-103.7e-10
speciesRoseburia_inulinivorans-0.1481.38e-104.12e-10
speciesEggerthella_sp_1_3_56FAA0.1462.04e-106.05e-10
genusSiphoviridae_noname0.1462.05e-106.05e-10
speciesPrevotella_stercorea-0.1453.18e-109.32e-10
speciesBifidobacterium_catenulatum0.1453.29e-109.59e-10
familyLeuconostocaceae0.1435.83e-101.69e-09
speciesRuminococcus_sp_JC3040.1426.1e-101.76e-09
speciesLactobacillus_fermentum0.1391.47e-094.21e-09
genusMitsuokella0.1391.73e-094.92e-09
speciesMitsuokella_unclassified0.1382.24e-096.33e-09
speciesParabacteroides_distasonis-0.1372.53e-097.11e-09
speciesSubdoligranulum_sp_4_3_54A2FAA0.1372.92e-098.16e-09
orderPseudomonadales0.1363.42e-099.5e-09
familyPropionibacteriaceae0.131.6e-084.42e-08
speciesAlistipes_shahii-0.1273.76e-081.03e-07
genusTuricibacter0.1255.89e-081.61e-07
speciesBacteroides_nordii-0.1255.96e-081.62e-07
speciesBacteroides_plebeius-0.1246.82e-081.84e-07
genusDialister0.1248.25e-082.21e-07
speciesRoseburia_unclassified0.1231.07e-072.85e-07
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1221.25e-073.31e-07
speciesTuricibacter_sanguinis0.1211.54e-074.06e-07
genusButyrivibrio0.122.11e-075.53e-07
speciesEubacterium_siraeum0.1173.79e-079.88e-07
speciesTuricibacter_unclassified0.1165.04e-071.31e-06
speciesLachnospiraceae_bacterium_3_1_46FAA0.1147.7e-071.99e-06
speciesLactobacillus_plantarum0.1139.12e-072.34e-06
speciesAlistipes_putredinis-0.1131.07e-062.73e-06
familyOscillospiraceae-0.1121.2e-063.03e-06
genusOscillibacter-0.1121.2e-063.03e-06
genusAnaerotruncus0.1111.4e-063.51e-06
speciesBifidobacterium_bifidum0.1111.66e-064.15e-06
speciesRuminococcus_lactaris0.111.73e-064.3e-06
genusParasutterella-0.112.07e-065.09e-06
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speciesC2likevirus_unclassified0.0790.0006280.00119
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speciesHoldemania_unclassified0.0760.0009530.00178
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genusPseudoflavonifractor0.0750.001260.00231
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speciesEubacterium_dolichum0.0720.001780.00317
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speciesEscherichia_unclassified0.0660.004470.00781
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speciesEubacterium_eligens-0.0570.01330.0226
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speciesLachnospiraceae_bacterium_1_1_57FAA0.0550.01790.0299
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speciesLactobacillus_salivarius0.0540.0190.0314
speciesEubacterium_biforme0.0540.01960.0322
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speciesEubacterium_sp_3_1_310.050.03060.0486
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speciesDialister_succinatiphilus0.0490.03340.0527
genusPorphyromonas0.0490.03440.0541
speciesEscherichia_coli0.0490.03460.0543
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speciesClostridium_citroniae-0.0480.03750.0582
genusButyricicoccus0.0480.03810.0588
speciesButyricicoccus_pullicaecorum0.0480.03810.0588
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speciesBilophila_wadsworthia-0.0470.04040.0619
speciesCoprococcus_sp_ART55_10.0470.04070.0622
speciesOdoribacter_unclassified0.0450.05160.0785
speciesFusobacterium_mortiferum0.0450.05170.0785
speciesAlistipes_unclassified0.0440.0580.0877
orderEnterobacteriales0.0440.05970.0897
familyEnterobacteriaceae0.0440.05970.0897
speciesStreptococcus_phage_Sfi210.0430.06130.0919
speciesEnterobacter_cloacae-0.0430.06210.0928
speciesAcidaminococcus_fermentans0.0430.06330.0943
genusCatenibacterium0.0430.06390.0945
speciesCatenibacterium_mitsuokai0.0430.06390.0945
genusPantoea0.0430.06540.0962
speciesPantoea_unclassified0.0430.06540.0962
genusLambdalikevirus0.0420.06850.1
speciesBacteroides_barnesiae0.0420.06910.101
familyVeillonellaceae0.0420.07240.105
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speciesClostridium_sp_ATCC_BAA_442-0.0410.07850.114
speciesAnaerostipes_unclassified0.040.08230.119
genusSlackia0.040.08330.12
genusRuminococcaceae_noname0.040.08370.12
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genusAcidaminococcus0.0390.0920.131
speciesLachnospiraceae_bacterium_8_1_57FAA0.0390.0930.132
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speciesPorphyromonas_uenonis0.0380.09610.135
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speciesClostridium_sp_L2_500.0380.1050.146
speciesWeissella_cibaria0.0370.1110.154
speciesBacteroides_clarus-0.0370.1130.156
speciesBacteroides_coprophilus-0.0360.1150.159
speciesParabacteroides_unclassified-0.0360.120.165
speciesProteus_mirabilis0.0350.130.178
familyViruses_noname0.0340.1360.186
genusViruses_noname0.0340.1360.186
genusProteus0.0340.1430.195
speciesAlistipes_sp_AP110.0320.1610.218
speciesFusobacterium_varium-0.0320.1640.222
familyOxalobacteraceae0.0320.1670.225
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speciesAcidaminococcus_intestini0.0320.1710.229
speciesBifidobacterium_pseudocatenulatum0.0320.1710.229
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genusClostridiales_noname0.0310.1840.245
speciesCollinsella_intestinalis0.030.1970.26
speciesLactobacillus_mucosae0.030.1970.26
speciesClostridium_hathewayi0.030.20.264
speciesAlistipes_sp_HGB5-0.0290.2050.27
speciesCampylobacter_concisus0.0290.2060.27
speciesSutterella_wadsworthensis-0.0290.2080.272
genusFusobacterium0.0290.2090.273
speciesStreptococcus_pasteurianus-0.0290.2170.282
genusOxalobacter0.0290.2180.282
speciesOxalobacter_formigenes0.0290.2180.282
speciesLactococcus_phage_bIL670.0280.2210.285
genusSutterella-0.0280.2330.299
speciesLactococcus_garvieae0.0280.2330.299
phylumSynergistetes-0.0270.2370.301
classSynergistia-0.0270.2370.301
orderSynergistales-0.0270.2370.301
familySynergistaceae-0.0270.2370.301
speciesCoprobacillus_sp_29_10.0270.2480.314
genusMegasphaera0.0270.2520.318
speciesParaprevotella_xylaniphila-0.0260.2540.32
speciesHaemophilus_paraphrohaemolyticus0.0260.2590.325
speciesAnaerotruncus_colihominis0.0260.2610.327
speciesKlebsiella_sp_MS_92_30.0250.2810.351
speciesDesulfovibrio_piger-0.0250.2820.351
speciesParabacteroides_sp_20_30.0240.290.36
speciesDesulfovibrio_desulfuricans0.0240.30.372
familyFusobacteriaceae0.0240.3040.375
speciesHoldemania_sp_AP2-0.0240.3040.375
speciesMegasphaera_micronuciformis0.0240.3050.375
speciesMegasphaera_unclassified0.0230.3130.384
speciesPrevotella_bivia-0.0230.3170.388
genusMorganella0.0230.3220.392
speciesMorganella_morganii0.0230.3220.392
genusWeissella0.0230.3280.398
speciesAlistipes_onderdonkii-0.0220.3320.402
genusTunalikevirus0.0220.3510.424
speciesEnterobacter_aerogenes-0.0220.3520.424
speciesDorea_unclassified-0.0210.3610.434
phylumFusobacteria0.020.3760.448
classFusobacteriia0.020.3760.448
orderFusobacteriales0.020.3760.448
speciesPrevotella_buccae-0.020.3890.462
speciesLactobacillus_ruminis-0.020.3960.47
genusCoprobacter0.020.3980.47
speciesCoprobacter_fastidiosus0.020.3980.47
genusSuccinatimonas-0.0190.4150.487
speciesSuccinatimonas_hippei-0.0190.4150.487
familyAcidaminococcaceae0.0190.4210.493
speciesRuminococcus_callidus-0.0180.4350.508
speciesCollinsella_unclassified0.0180.4360.508
familyCampylobacteraceae0.0170.4670.543
speciesHaemophilus_sputorum0.0170.4710.546
speciesClostridium_bolteae0.0160.4860.562
speciesLactococcus_phage_936_sensu_lato0.0160.4880.563
speciesKlebsiella_phage_KP360.0160.50.576
familyClostridiales_noname-0.0150.5140.59
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speciesVeillonella_unclassified-0.0130.5620.641
speciesWeissella_confusa0.0130.5640.641
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speciesMitsuokella_multacida0.0130.5870.663
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speciesBacteroides_eggerthii0.0120.5970.671
genusCampylobacter0.0120.5990.672
speciesVeillonella_dispar-0.0110.6210.695
speciesLachnospiraceae_bacterium_2_1_46FAA0.0110.6250.695
speciesLeuconostoc_lactis0.0110.6260.695
speciesClostridium_symbiosum0.0110.6260.695
genusParaprevotella0.0110.6430.712
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classNegativicutes0.010.6640.731
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speciesEnterobacteria_phage_HK5440.010.6680.733
genusPhascolarctobacterium-0.0090.70.765
speciesPhascolarctobacterium_succinatutens-0.0090.70.765
classEpsilonproteobacteria0.0080.730.794
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speciesLactobacillus_sanfranciscensis-0.0080.7320.794
speciesClostridium_nexile0.0080.7430.803
speciesAlistipes_indistinctus-0.0080.7430.803
speciesVeillonella_atypica-0.0080.7450.803
speciesBacteroides_fluxus-0.0070.7470.803
speciesParabacteroides_sp_D13-0.0070.7570.811
genusDesulfovibrio0.0070.7580.811
speciesBacteroides_salanitronis-0.0070.760.812
genusVeillonella0.0070.770.82
speciesBifidobacterium_angulatum0.0060.7850.833
genusActinobacillus0.0060.7890.833
speciesActinobacillus_unclassified0.0060.7890.833
speciesRoseburia_intestinalis-0.0060.7890.833
genusAggregatibacter0.0060.7930.835
familyBacteroidales_noname0.0050.8150.853
genusBacteroidales_noname0.0050.8150.853
speciesBacteroidales_bacterium_ph80.0050.8150.853
speciesParaprevotella_clara0.0050.8390.876
speciesBacteroides_sp_1_1_60.0050.8430.878
speciesAlistipes_senegalensis0.0040.8550.889
speciesSlackia_piriformis0.0040.8570.889
speciesCitrobacter_freundii-0.0040.8750.906
speciesStreptococcus_infantarius0.0030.8880.917
genusFaecalibacterium0.0030.8960.921
speciesFaecalibacterium_prausnitzii0.0030.8960.921
speciesAcidaminococcus_unclassified0.0030.90.921
speciesVeillonella_parvula0.0030.90.921
genusMyoviridae_noname0.0030.9030.922
genusAcidaminococcaceae_unclassified0.0030.9040.922
speciesClostridium_asparagiforme-0.0030.9080.924
familyPodoviridae-0.0020.9330.947
speciesRoseburia_hominis0.0020.9410.953
speciesSutterella_parvirubra-0.0020.9450.953
speciesKlebsiella_unclassified0.0020.9450.953
genusCitrobacter-0.0010.9630.969
speciesCitrobacter_unclassified0.0010.9720.975
speciesAggregatibacter_segnis-0.0010.9730.975
orderAeromonadales0.0010.9760.976
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Rheumatoid arthritisChina127980.03265204039230.02496580124190.005734602311837002.33434
Type II diabetesSweden53920.0725966530730.0536050712150.006749703810852800.948188
Liver cirrhosisChina1201140.02490931961550.01950247806860.00727114102861022334.3411
ObesityDenmark1691230.02353142203670.02865872270440.0556267932359525217.2701
Colorectal cancerAustria64350.07660847174780.08959208683140.0635348447168352811.9367
Type II diabetesChina1831850.02940586141350.02428442444620.0764361270764845727.9487
Type II diabetesDenmark752770.02061794325830.02530441372610.2529521775481444247.34
Crohns diseaseSpain17660.04884106906050.03408961894490.3290412539532022867.2585
Ulcerative colitisSpain78660.03577283956030.03408961894490.5897450232422137370.5054
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382