MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:17:29 PST
Job id & description: 2402, purine22
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
O2.UC24-1_GL00388813969735CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-73A_GL00199573976882CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI10_GL01273073972359CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC16-0_GL00084873952789CompleteK03784COG0813unknownunknown100.0100.0100.0
658659.HMPREF0983_002383979307CompleteK03783COG0005Firmicutesunknown100.0100.0100.0
764143897-stool1_revised3958229CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0012_GL00786633959507CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC1-2_GL00686833948950CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC48-0_GL02966653950152CompleteK03784COG0813FirmicutesBlautia100.0100.0100.0
O2.UC7-1_GL01570073950505CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
469613.HMPREF0864_013763958842CompleteK05810COG1496Proteobacteriaunknown100.0100.0100.0
MH0318_GL00026223985599CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC15-1_GL01379223949058CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI37_GL00910703993634Lack 3'-endK05810COG1496ProteobacteriaHaemophilus100.0100.0100.0
V1.UC16-0_GL00284103973206CompleteK03784COG0813unknownunknown100.0100.0100.0
763860675-stool1_revised3958094CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0362_GL00418853986706CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC29-0_GL00167703990453CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-61A_GL00152723976721CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
V1.CD17-0_GL00412513971201CompleteK03784COG0813FirmicutesRuminococcus100.0100.0100.0
V1.CD6-0-PT_GL00525633951562CompleteK03784COG0813unknownunknown100.0100.0100.0
457421.CBFG_051603979135CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0045_GL00031793960011Lack both endsK00757COG2820BacteroidetesBacteroides100.0100.0100.0
O2.UC43-1_GL00637563970367Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
V1.CD17-4_GL00940163971215CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD32-0_GL01772253971586CompleteK03784COG0813unknownunknown100.0100.0100.0
457396.CSBG_011873958783CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
MH0178_GL00406193982715CompleteK03784COG0813FirmicutesCoprobacillus100.0100.0100.0
MH0360_GL00200823945807CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0372_GL01116073987041CompleteK03784COG0813FirmicutesCoprobacillus100.0100.0100.0
MH0373_GL00699153987079CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0406_GL01711373947082CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC48-1_GL00098603950166CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD37-4_GL00392303971670CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI17_GL01730323952183CompleteK03784COG0813FusobacteriaFusobacterium100.0100.0100.0
469595.CSAG_007473958812CompleteK03784COG0813ProteobacteriaCitrobacter100.0100.0100.0
MH0012_GL00169993979798CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0012_GL01245123959533CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0148_GL01241213961902CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0456_GL00194063968909CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.CD3-0-PT_GL01433103948817CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
O2.UC58-0_GL01099713991429Lack 3'-endK03783COG0005Firmicutesunknown100.0100.0100.0
SZEY-81A_GL00419393955589CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
V1.FI17_GL00603483952111CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC39-4_GL00559463953305CompleteK03784COG0813unknownunknown100.0100.0100.0
1069533.Sinf_07083958568CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
195102.CPE13983958573CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
638301.HMPREF0444_03713979282CompleteK03784COG0813FirmicutesGranulicatella100.0100.0100.0
ED12A_GL00220173954945CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0082_GL00590503960494CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0189_GL00683903983042CompleteK03784COG0813SpirochaetesTreponema100.0100.0100.0
MH0206_GL01100513963164CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0452_GL01224473968822CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC40-2_GL00627973990812CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC48-0_GL00864333991112CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
T2D-51A_GL01453583956330CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-63A_GL00413483956459CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
V1.CD18-0_GL00711183950780CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
V1.CD34-0_GL01796203971643CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI09_GL00172603972312CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0086_GL00911613980841CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0189_GL00067553983000CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0336_GL00280173965558Lack 5'-endK03784COG0813FirmicutesCoprococcus100.0100.0100.0
MH0339_GL01187443965655CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0441_GL00130693968471CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0012_GL01905593979907CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-31A_GL00416793956177CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI17_GL00599813993175CompleteK03784COG0813unknownunknown100.0100.0100.0
210007.SMU_12273978961CompleteK03784COG0813FirmicutesStreptococcus100.0100.0100.0
MH0012_GL00789933979837CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0348_GL00201803986338Lack both endsK00757COG2820unknownunknown100.0100.0100.0
MH0354_GL01015793945601CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC38-0_GL00335933953232CompleteK03784COG0813FirmicutesEnterococcus100.0100.0100.0
DLM013_GL00417023954100CompleteK03784COG0813unknownunknown100.0100.0100.0
765701615-stool1_revised3978903CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD44-0_GL00746293951332CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
V1.FI17_GL01783443952185CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0402_GL00099903967302CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0435_GL00356233947945CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
T2D-122A_GL00366743955815CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0099_GL00910213960848CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0012_GL00098603959470CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0372_GL01229433987045CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC49-0_GL01502563994538Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
195102.CPE17583978955CompleteK05810COG1496FirmicutesClostridium100.0100.0100.0
684738.LLKF_09603979050CompleteK03784COG0813FirmicutesLactococcus100.0100.0100.0
MH0082_GL00653903960496CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0329_GL00790213965376CompleteK03784COG0813unknownunknown100.0100.0100.0
272622.LACR_10033978968CompleteK03784COG0813FirmicutesLactococcus100.0100.0100.0
MH0096_GL01004603960761CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0143_GL00867233961756CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0126_GL00809683981709CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0250_GL00151203963875CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.CD35-0_GL00120793971647CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0143_GL00192153982088CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0090_GL01107993960639CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0014_GL01073283959652CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0097_GL00453713981073CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0099_GL00155233960844CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0099_GL00389683981143CompleteK03784COG0813unknownunknown100.0100.0100.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
classErysipelotrichia0.215.32e-208.37e-18
orderErysipelotrichales0.215.32e-208.37e-18
familyErysipelotrichaceae0.215.32e-208.37e-18
genusCoprobacillus0.1771.13e-141.33e-12
genusBlautia0.1761.99e-141.88e-12
speciesBacteroides_coprocola0.1673.12e-132.45e-11
genusAnaerotruncus0.1595.37e-123.62e-10
familyClostridiaceae0.1579.36e-124.5e-10
genusFaecalibacterium-0.1579.54e-124.5e-10
speciesFaecalibacterium_prausnitzii-0.1579.54e-124.5e-10
genusClostridium0.1523.5e-111.5e-09
genusLachnospiraceae_noname0.1363.38e-091.33e-07
speciesClostridium_ramosum0.1345.46e-091.98e-07
speciesClostridium_hathewayi0.1346.62e-092.23e-07
speciesAnaerotruncus_unclassified0.131.6e-085.03e-07
speciesCoprobacillus_sp_29_10.1273.76e-081.11e-06
genusErysipelotrichaceae_noname0.1273.98e-081.11e-06
speciesCoprobacillus_unclassified0.1247.89e-082.07e-06
speciesRuminococcus_torques0.1211.63e-074.05e-06
orderCoriobacteriales0.1192.25e-075.06e-06
familyCoriobacteriaceae0.1192.25e-075.06e-06
speciesRoseburia_inulinivorans-0.1173.91e-078.39e-06
speciesErysipelotrichaceae_bacterium_6_1_450.1174.18e-078.58e-06
genusMethanobrevibacter0.1164.65e-079.14e-06
genusAnaerostipes0.1156.58e-071.21e-05
genusSolobacterium0.1147.55e-071.21e-05
speciesSolobacterium_moorei0.1147.55e-071.21e-05
speciesSubdoligranulum_sp_4_3_54A2FAA0.1147.66e-071.21e-05
classMethanobacteria0.1147.97e-071.21e-05
orderMethanobacteriales0.1147.97e-071.21e-05
familyMethanobacteriaceae0.1147.97e-071.21e-05
genusClostridiales_noname0.1148.29e-071.22e-05
speciesClostridium_bolteae0.1139.24e-071.31e-05
genusEggerthella0.1139.43e-071.31e-05
speciesMethanobrevibacter_smithii0.1139.82e-071.32e-05
speciesCoprobacillus_sp_D60.1131.05e-061.38e-05
phylumEuryarchaeota0.1121.1e-061.4e-05
speciesEscherichia_coli0.1092.15e-062.67e-05
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1092.34e-062.72e-05
speciesRoseburia_intestinalis-0.1092.34e-062.72e-05
speciesAnaerostipes_unclassified0.1092.36e-062.72e-05
genusEscherichia0.1082.74e-063.08e-05
speciesEggerthella_unclassified0.1073.29e-063.45e-05
classBacteroidia-0.1073.35e-063.45e-05
orderBacteroidales-0.1073.35e-063.45e-05
phylumBacteroidetes-0.1073.36e-063.45e-05
speciesRuminococcus_champanellensis0.1073.48e-063.49e-05
genusRoseburia-0.1064.13e-064.06e-05
genusSubdoligranulum0.1055e-064.82e-05
speciesEnterococcus_faecium0.1047.13e-066.73e-05
familyClostridiales_Family_XI_Incertae_Sedis0.11.45e-050.000134
familyClostridiales_noname0.0991.83e-050.000166
genusCatenibacterium0.0982.01e-050.000176
speciesCatenibacterium_mitsuokai0.0982.01e-050.000176
speciesErysipelotrichaceae_bacterium_21_30.0982.29e-050.000197
speciesSubdoligranulum_unclassified0.0982.36e-050.000199
familyEnterococcaceae0.0963.07e-050.000254
genusDorea0.0963.17e-050.000258
speciesEubacterium_limosum0.0963.45e-050.000276
genusEnterococcus0.0953.78e-050.000297
speciesClostridiales_bacterium_1_7_47FAA0.0954.09e-050.000314
familyPeptostreptococcaceae0.0954.13e-050.000314
speciesStreptococcus_sanguinis0.0945.01e-050.000375
familyActinomycetaceae0.0936.1e-050.00045
familyOxalobacteraceae0.0927.22e-050.000524
orderEnterobacteriales0.0918.32e-050.000586
familyEnterobacteriaceae0.0918.32e-050.000586
genusActinomyces0.099.07e-050.000623
phylumActinobacteria0.099.24e-050.000623
classActinobacteria0.099.24e-050.000623
genusOxalobacter0.0890.0001090.000715
speciesOxalobacter_formigenes0.0890.0001090.000715
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0890.0001250.000808
speciesMethanobrevibacter_unclassified0.0880.0001370.00082
phylumVerrucomicrobia0.0880.0001390.00082
classVerrucomicrobiae0.0880.0001390.00082
orderVerrucomicrobiales0.0880.0001390.00082
familyVerrucomicrobiaceae0.0880.0001390.00082
genusAkkermansia0.0880.0001390.00082
speciesAkkermansia_muciniphila0.0880.0001390.00082
genusOlsenella0.0860.0001990.00116
genusPeptostreptococcus0.0850.0002430.0014
speciesErysipelotrichaceae_bacterium_2_2_44A0.0840.0002760.00157
speciesEggerthella_lenta0.0830.0003030.0017
speciesCoprococcus_catus0.0810.0004610.00256
genusParvimonas0.080.0005240.00285
speciesParvimonas_unclassified0.080.0005250.00285
speciesBacteroides_thetaiotaomicron0.080.000560.003
speciesEubacterium_hallii0.0770.0008020.00425
speciesRuminococcus_obeum0.0770.0008350.00438
genusPeptostreptococcaceae_noname0.0770.0008810.00457
familySutterellaceae-0.0760.001060.00537
speciesDorea_longicatena0.0760.001060.00537
speciesLachnospiraceae_bacterium_2_1_58FAA0.0760.001070.00537
genusHaemophilus-0.0760.001080.00537
speciesClostridium_bartlettii0.0750.001140.0056
speciesHaemophilus_parainfluenzae-0.0750.001180.00574
classBetaproteobacteria-0.0750.00120.00578
speciesStreptococcus_australis0.0750.001230.00586
speciesRoseburia_unclassified0.0740.001340.00632
speciesFusobacterium_varium0.0730.001510.00706
orderPasteurellales-0.0730.001640.00752
familyPasteurellaceae-0.0730.001640.00752
orderBurkholderiales-0.0730.001660.00753
speciesCoprococcus_comes0.0720.001970.00882
speciesFusobacterium_ulcerans0.0710.001980.00882
speciesBacteroides_vulgatus-0.0710.002050.00904
familyPrevotellaceae-0.0710.002070.00905
speciesEscherichia_unclassified0.0710.00220.00953
speciesOlsenella_unclassified0.070.002420.0104
speciesClostridium_clostridioforme0.070.002450.0104
speciesGemella_morbillorum0.070.002530.0107
speciesBlautia_producta0.0690.002740.0114
genusRuminococcus0.0690.002840.0118
phylumViruses_noname0.0690.002920.0119
classViruses_noname0.0690.002920.0119
speciesEubacterium_ramulus0.0690.002950.0119
orderViruses_noname0.0690.002980.0119
speciesLachnospiraceae_bacterium_6_1_63FAA0.0680.003090.0123
speciesAlistipes_indistinctus0.0680.003170.0125
phylumFirmicutes0.0680.003320.013
genusPorphyromonas0.0670.00350.0135
familyLachnospiraceae0.0670.003630.0139
speciesPeptostreptococcus_anaerobius0.0670.003870.0147
speciesEubacterium_siraeum0.0660.004330.0164
speciesClostridium_citroniae0.0660.00440.0165
familyStreptococcaceae0.0660.004580.017
speciesEnterococcus_faecalis0.0650.004930.0182
genusPeptoniphilus0.0650.005050.0185
speciesEubacterium_rectale-0.0640.00530.0192
speciesRuminococcus_callidus-0.0640.005340.0192
classClostridia0.0640.005510.0196
orderClostridiales0.0640.005510.0196
speciesPeptostreptococcus_stomatis0.0630.006620.0233
classGammaproteobacteria0.0630.00670.0233
speciesClostridium_symbiosum0.0630.006740.0233
genusButyrivibrio0.0630.006760.0233
genusGordonibacter0.0610.00850.0289
speciesGordonibacter_pamelaeae0.0610.00850.0289
speciesCollinsella_unclassified0.060.009010.0304
speciesPorphyromonas_uenonis0.060.00960.0321
genusWeissella0.0580.01190.0396
genusStreptococcus0.0580.01230.0406
genusCollinsella0.0580.01260.0413
genusDesulfovibrio0.0570.01290.042
familyLeuconostocaceae0.0570.01360.044
speciesVeillonella_atypica-0.0560.01540.0494
speciesAlistipes_sp_AP110.0550.01640.0523
speciesMitsuokella_unclassified0.0550.01660.0526
speciesOscillibacter_sp_KLE_1728-0.0550.01790.0563
orderBacillales0.0550.0180.0563
genusButyricimonas0.0540.01860.0572
speciesButyricimonas_synergistica0.0540.01860.0572
familyBacillales_noname0.0540.01880.0572
genusGemella0.0540.01880.0572
speciesDorea_formicigenerans0.0540.01960.0593
speciesEubacterium_eligens-0.0540.020.0601
speciesBifidobacterium_angulatum-0.0540.02040.0609
speciesBacteroides_uniformis-0.0530.02080.0617
orderActinomycetales0.0530.02110.0622
speciesStreptococcus_mutans0.0530.02120.0622
speciesLactobacillus_gasseri-0.0530.02160.0629
speciesButyrivibrio_crossotus0.0530.02270.0657
classDeltaproteobacteria0.0520.02350.0668
orderDesulfovibrionales0.0520.02350.0668
familyDesulfovibrionaceae0.0520.02350.0668
genusButyricicoccus0.0520.02380.0669
speciesButyricicoccus_pullicaecorum0.0520.02380.0669
speciesDesulfovibrio_desulfuricans0.0520.02450.0684
genusLactococcus0.0510.0260.0722
genusEubacterium-0.0510.02640.0729
familyEubacteriaceae-0.0510.02730.0749
familyViruses_noname0.0510.02770.075
genusViruses_noname0.0510.02770.075
speciesAnaerotruncus_colihominis0.0510.02780.075
speciesLactobacillus_mucosae-0.0510.0280.0751
genusStaphylococcus0.0510.02830.0755
genusMethanosphaera0.0510.02890.0758
genusMitsuokella0.0510.02890.0758
speciesMethanosphaera_stadtmanae0.0510.02890.0758
speciesAnaerostipes_hadrus0.050.02920.0761
speciesMegamonas_funiformis-0.050.02940.0762
speciesAlistipes_senegalensis0.050.02970.0766
orderBifidobacteriales0.050.03050.0778
familyBifidobacteriaceae0.050.03050.0778
speciesCollinsella_tanakaei-0.050.03130.079
speciesClostridium_sp_ATCC_BAA_4420.050.03130.079
speciesPorphyromonas_asaccharolytica0.050.03160.0793
speciesRuminococcus_gnavus0.050.03190.0797
speciesRuminococcus_bromii0.050.03210.0797
speciesLachnospiraceae_bacterium_1_4_56FAA0.0490.03260.0806
genusSlackia0.0480.03720.0915
genusBifidobacterium0.0480.03750.0917
speciesRuminococcus_sp_JC3040.0480.03770.0917
orderLactobacillales0.0480.03810.0918
speciesLachnospiraceae_bacterium_1_1_57FAA0.0480.03810.0918
familyStaphylococcaceae0.0470.04030.0966
speciesLachnospiraceae_bacterium_5_1_63FAA0.0470.04110.098
classBacilli0.0470.04170.0984
speciesBacteroides_sp_1_1_60.0470.04180.0984
speciesEubacterium_cylindroides0.0470.04190.0984
orderCaudovirales0.0470.04240.0991
speciesStreptococcus_anginosus0.0460.04560.105
genusMorganella0.0460.04580.105
speciesMorganella_morganii0.0460.04580.105
speciesLachnospiraceae_bacterium_7_1_58FAA0.0460.04720.108
genusSutterella-0.0460.04870.111
familyPorphyromonadaceae0.0450.04990.113
genusPrevotella-0.0450.04990.113
speciesCampylobacter_concisus-0.0450.05020.113
speciesPrevotella_copri-0.0450.05310.119
speciesAcidaminococcus_fermentans0.0440.05620.125
speciesLactococcus_lactis0.0440.05710.127
genusCoprococcus0.0440.05830.129
speciesLactobacillus_rhamnosus0.0430.0610.134
familySiphoviridae0.0430.06290.137
speciesMegamonas_unclassified-0.0430.06520.142
genusProteus-0.0420.06640.144
familyRuminococcaceae0.0420.06770.145
speciesPropionibacterium_freudenreichii0.0420.06780.145
genusPantoea0.0420.06960.147
speciesPantoea_unclassified0.0420.06960.147
genusMegamonas-0.0420.06990.147
speciesWeissella_cibaria0.0420.070.147
speciesSutterella_wadsworthensis-0.0420.07030.147
speciesBacteroides_stercoris-0.0420.07080.147
speciesParabacteroides_sp_20_30.0420.07090.147
speciesParabacteroides_unclassified0.0410.07320.152
speciesPrevotella_stercorea-0.0410.07530.155
speciesParabacteroides_merdae-0.0410.07530.155
speciesBifidobacterium_breve-0.0410.07710.158
speciesOdoribacter_laneus0.0410.07750.158
genusSiphoviridae_noname0.0410.0790.16
speciesLactobacillus_sanfranciscensis0.040.08050.162
phylumFusobacteria0.040.08470.169
classFusobacteriia0.040.08470.169
orderFusobacteriales0.040.08470.169
speciesDorea_unclassified0.040.08660.172
speciesBlautia_hydrogenotrophica0.0390.08830.174
speciesClostridium_leptum0.0390.0950.187
speciesClostridium_sp_KLE_17550.0380.09610.188
genusPropionibacterium0.0380.0980.191
speciesCollinsella_aerofaciens0.0380.09840.191
speciesBilophila_unclassified0.0380.1010.195
genusPseudoflavonifractor0.0380.1050.201
speciesPseudoflavonifractor_capillosus0.0380.1050.201
speciesRuminococcus_sp_5_1_39BFAA0.0370.1060.203
genusFusobacterium0.0370.1070.204
genusBilophila0.0370.110.207
speciesEnterobacteria_phage_HK5440.0370.110.207
orderPseudomonadales0.0370.1110.207
speciesCoprococcus_eutactus0.0370.1110.207
phylumProteobacteria0.0370.1120.207
familyFusobacteriaceae0.0370.1120.207
speciesHoldemania_sp_AP20.0370.1120.207
speciesLachnospiraceae_bacterium_5_1_57FAA0.0370.1130.208
speciesStreptococcus_thermophilus0.0370.1140.209
classNegativicutes-0.0360.1180.215
orderSelenomonadales-0.0360.1180.215
speciesWeissella_confusa0.0360.1230.223
speciesLactobacillus_crispatus-0.0360.1240.224
speciesLactobacillus_vaginalis-0.0350.1270.227
speciesOdoribacter_unclassified0.0350.1270.227
speciesParabacteroides_goldsteinii0.0350.1270.227
familyVeillonellaceae-0.0350.1320.235
speciesBifidobacterium_dentium-0.0350.1340.238
genusFlavonifractor0.0340.1450.253
speciesFlavonifractor_plautii0.0340.1450.253
speciesBacteroides_xylanisolvens-0.0340.1450.253
speciesBacteroides_caccae0.0340.1450.253
speciesBacteroides_dorei-0.0340.1460.254
speciesStreptococcus_lutetiensis0.0330.1480.256
speciesParabacteroides_johnsonii0.0330.1480.256
speciesLactobacillus_plantarum0.0330.1490.257
speciesMegamonas_hypermegale-0.0330.1520.261
speciesStreptococcus_salivarius0.0330.1570.268
speciesClostridium_asparagiforme0.0320.1630.278
familySuccinivibrionaceae-0.0320.1710.29
speciesLeuconostoc_lactis-0.0310.1730.292
genusClostridiaceae_noname0.0310.1750.292
speciesClostridiaceae_bacterium_JC1180.0310.1750.292
speciesBacteroides_sp_2_1_22-0.0310.1750.292
speciesBilophila_wadsworthia0.0310.1750.292
speciesHoldemania_unclassified0.0310.1760.293
speciesBacteroides_pectinophilus0.0310.1780.295
speciesLachnospiraceae_bacterium_3_1_46FAA0.0310.180.297
genusPyramidobacter-0.0310.1820.298
speciesPyramidobacter_piscolens-0.0310.1820.298
speciesDialister_succinatiphilus0.0310.1830.299
genusKlebsiella-0.0310.1850.301
speciesEubacterium_dolichum0.030.1880.305
genusSuccinatimonas-0.030.1930.31
speciesSuccinatimonas_hippei-0.030.1930.31
speciesPrevotella_bivia0.030.1930.31
speciesEggerthella_sp_1_3_56FAA0.030.1940.31
speciesCitrobacter_unclassified0.030.1960.312
genusActinobacillus-0.030.1970.312
speciesActinobacillus_unclassified-0.030.1970.312
speciesCollinsella_intestinalis0.0290.2120.335
familyMyoviridae0.0290.2130.335
genusHoldemania0.0290.2150.337
speciesBacteroides_coprophilus0.0280.2190.342
speciesEubacterium_sp_3_1_310.0280.2230.347
familyOscillospiraceae-0.0280.2250.348
genusOscillibacter-0.0280.2250.348
genusParabacteroides0.0280.2260.349
speciesProteus_mirabilis-0.0280.2290.352
speciesCoprococcus_sp_ART55_1-0.0270.2360.362
speciesKlebsiella_phage_KP36-0.0270.2390.365
speciesKlebsiella_sp_MS_92_3-0.0270.240.365
speciesLactobacillus_fermentum0.0270.2410.366
speciesHaemophilus_paraphrohaemolyticus0.0270.2430.367
genusSutterellaceae_unclassified-0.0270.2450.367
phylumSynergistetes-0.0270.2470.367
classSynergistia-0.0270.2470.367
orderSynergistales-0.0270.2470.367
familySynergistaceae-0.0270.2470.367
speciesDialister_invisus-0.0270.2470.367
speciesClostridium_nexile0.0270.2490.368
speciesLactococcus_garvieae0.0260.2530.372
genusCoprobacter0.0260.2540.372
speciesCoprobacter_fastidiosus0.0260.2540.372
genusLambdalikevirus0.0260.2570.374
speciesBacteroides_intestinalis0.0260.2570.374
speciesBifidobacterium_longum0.0260.2580.375
speciesCoriobacteriaceae_bacterium_phI0.0260.2680.388
speciesVeillonella_dispar-0.0260.270.39
familyPropionibacteriaceae0.0250.2720.391
familyBacteroidales_noname0.0250.2820.401
genusBacteroidales_noname0.0250.2820.401
speciesKlebsiella_pneumoniae-0.0250.2820.401
speciesBacteroidales_bacterium_ph80.0250.2820.401
speciesButyrivibrio_unclassified0.0250.2830.401
speciesBacteroides_salanitronis-0.0250.2840.401
speciesClostridium_sp_L2_500.0250.2860.403
genusCoriobacteriaceae_noname0.0250.2870.403
speciesClostridium_spiroforme0.0250.2890.405
speciesBacteroides_ovatus-0.0240.2960.413
speciesOscillibacter_unclassified-0.0240.2980.415
speciesPeptostreptococcaceae_noname_unclassified0.0240.3020.419
speciesLactobacillus_casei_paracasei0.0240.3070.425
speciesEubacterium_biforme0.0240.3080.425
speciesCitrobacter_freundii0.0230.3170.436
genusAdlercreutzia0.0230.3190.436
speciesAdlercreutzia_equolifaciens0.0230.3190.436
speciesBifidobacterium_adolescentis0.0230.3210.438
speciesSlackia_piriformis0.0230.3250.442
speciesBacteroides_sp_4_3_47FAA0.0230.3280.445
genusVeillonella-0.0220.3360.454
genusCitrobacter0.0210.3550.477
speciesBacteroides_fluxus-0.0210.3550.477
speciesVeillonella_unclassified-0.0210.3580.48
speciesAlistipes_putredinis-0.0210.3590.48
speciesLactococcus_phage_P6800.0210.3610.481
speciesStreptococcus_infantarius0.0210.3650.485
speciesMegasphaera_elsdenii-0.0210.3670.486
genusParaprevotella-0.0210.3690.486
genusPhascolarctobacterium-0.0210.3710.486
speciesErysipelotrichaceae_bacterium_3_1_530.0210.3710.486
speciesPhascolarctobacterium_succinatutens-0.0210.3710.486
familyBacteroidaceae0.0210.3740.486
genusBacteroides0.0210.3740.486
speciesRuminococcus_lactaris-0.0210.3740.486
orderAeromonadales-0.020.3840.498
speciesStreptococcus_pasteurianus0.020.3850.498
genusAcidaminococcus0.020.3860.498
genusLeuconostoc0.0190.4050.521
speciesBacteroides_clarus0.0190.4120.528
familyLactobacillaceae0.0190.4140.53
speciesAggregatibacter_segnis-0.0180.4340.554
genusC2likevirus0.0180.4370.556
speciesParaprevotella_unclassified-0.0180.4390.557
speciesBifidobacterium_animalis0.0180.4420.559
speciesMegamonas_rupellensis-0.0180.4480.565
genusMyoviridae_noname0.0170.4510.568
speciesKlebsiella_unclassified-0.0170.460.577
speciesMegasphaera_unclassified0.0170.4640.581
speciesParaprevotella_xylaniphila-0.0170.4760.594
genusTunalikevirus-0.0160.4780.595
speciesBacteroides_salyersiae-0.0160.4810.597
speciesStreptococcus_parasanguinis0.0160.490.607
genusParasutterella-0.0160.5010.617
speciesParasutterella_excrementihominis-0.0160.5010.617
speciesEnterobacter_aerogenes-0.0160.5020.617
speciesAlistipes_onderdonkii0.0150.5060.619
speciesHaemophilus_sputorum-0.0150.5070.619
speciesC2likevirus_unclassified0.0150.5080.619
speciesLactobacillus_acidophilus-0.0150.5090.619
speciesEubacterium_ventriosum0.0150.510.619
genusBarnesiella0.0150.5130.619
speciesBarnesiella_intestinihominis0.0150.5130.619
speciesEnterobacter_cloacae0.0150.5180.624
speciesBacteroides_eggerthii0.0140.5320.639
speciesAcidaminococcus_intestini0.0140.5340.64
speciesStreptococcus_mitis_oralis_pneumoniae0.0140.5360.64
speciesHoldemania_filiformis0.0140.5440.648
speciesLactobacillus_oris-0.0140.5540.659
speciesAlistipes_finegoldii0.0130.5840.692
speciesLactobacillus_amylovorus0.0130.5850.692
speciesRoseburia_hominis-0.0120.6020.71
speciesAlistipes_sp_HGB5-0.0120.6140.723
genusLactobacillus0.0110.6220.73
genusEnterobacter0.0110.6240.73
speciesBacteroides_cellulosilyticus-0.0110.6250.73
speciesRothia_mucilaginosa0.0110.6290.733
speciesAlistipes_unclassified-0.0110.6360.739
speciesFusobacterium_nucleatum0.0110.6450.748
speciesSutterella_parvirubra-0.010.6630.767
speciesOdoribacter_splanchnicus0.010.6690.772
speciesStreptococcus_gordonii0.010.6740.774
speciesParabacteroides_sp_D130.010.6740.774
speciesStreptococcus_phage_Sfi21-0.0090.6820.781
speciesLactobacillus_salivarius-0.0090.6860.781
speciesBacteroides_fragilis0.0090.6860.781
familyPodoviridae-0.0090.6870.781
speciesParaprevotella_clara0.0090.6930.786
familyRikenellaceae0.0090.6970.787
genusAlistipes0.0090.6970.787
speciesMegasphaera_micronuciformis-0.0090.7090.799
speciesVeillonella_parvula-0.0080.7170.806
familyCampylobacteraceae0.0080.7190.806
speciesBifidobacterium_pseudocatenulatum-0.0080.7230.809
familyMicrococcaceae0.0080.7270.809
genusRothia0.0080.7270.809
speciesLactococcus_phage_jm2-0.0080.730.811
speciesLactobacillus_ruminis0.0080.7330.812
genusCampylobacter0.0080.7450.822
genusOdoribacter0.0070.7460.822
genusMegasphaera0.0070.7470.822
speciesLactococcus_phage_bIL67-0.0070.7520.823
genusRuminococcaceae_noname0.0070.7530.823
speciesRuminococcaceae_bacterium_D160.0070.7530.823
genusDialister-0.0070.7670.836
genusAggregatibacter-0.0070.7740.842
speciesBacteroides_massiliensis-0.0060.7790.842
classEpsilonproteobacteria0.0060.780.842
orderCampylobacterales0.0060.780.842
familyAcidaminococcaceae-0.0060.7950.857
speciesBacteroides_finegoldii-0.0050.820.882
speciesLactococcus_phage_phi70.0050.8340.895
speciesBacteroides_oleiciplenus0.0040.8470.904
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0040.8470.904
speciesAcidaminococcus_unclassified-0.0040.8520.907
speciesTuricibacter_sanguinis-0.0040.8530.907
speciesDesulfovibrio_piger0.0040.8560.908
speciesMitsuokella_multacida0.0040.8610.911
speciesLactobacillus_reuteri-0.0040.8650.911
speciesLactococcus_phage_936_sensu_lato0.0040.8650.911
speciesBacteroides_plebeius-0.0040.8760.921
genusAcidaminococcaceae_unclassified-0.0030.880.923
speciesBifidobacterium_catenulatum0.0030.8940.936
speciesKlebsiella_oxytoca0.0030.8970.937
speciesParabacteroides_distasonis0.0030.90.938
familyBurkholderiales_noname0.0030.9090.942
speciesBacteroides_sp_3_1_19-0.0030.910.942
speciesFusobacterium_mortiferum-0.0030.910.942
speciesClostridium_perfringens0.0020.9250.955
speciesBacteroides_barnesiae0.0020.9280.956
speciesBacteroides_faecis0.0020.9310.957
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0020.9360.96
speciesStreptococcus_vestibularis0.0010.9480.968
speciesBifidobacterium_bifidum0.0010.9480.968
speciesTuricibacter_unclassified0.0010.950.968
speciesAlistipes_shahii0.0010.9520.968
speciesBacteroides_nordii0.0010.9570.971
genusBurkholderiales_noname0.0010.9670.977
speciesBurkholderiales_bacterium_1_1_470.0010.9670.977
speciesPrevotella_buccae0.0010.9720.98
speciesOscillibacter_sp_KLE_1745-0.0010.9760.982
speciesLachnospiraceae_bacterium_2_1_46FAA0.00.9870.991
genusTuricibacter0.01.01.0
speciesLactobacillus_delbrueckii0.01.01.0
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesChina1831850.02530872898120.02199450834870.0536753493048719123.7648
ObesityDenmark1691230.01962262215680.02230269685020.118449768899809126.6055
Rheumatoid arthritisChina127980.02507108861970.02748489174230.2731932599721121637.4029
Colorectal cancerAustria64350.0369804613670.02715120185550.373847813171436848.6128
Crohns diseaseSpain17660.03347361404910.02501134541830.426318999652208273.4231
Type II diabetesSweden53920.02241980335710.02160503363070.4402192647641402647.4975
Liver cirrhosisChina1201140.02061001859640.01977771427460.4646948844032388080.2177
Type II diabetesDenmark752770.01995351218530.02075614778160.7091451511862495781.8075
Ulcerative colitisSpain78660.02601329590960.02501134541830.7771528652512523783.252
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382