MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:18:06 PST
Job id & description: 2403, purine23
Query type: protein
Count queries & homologs: 100, 100
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
V1.UC42-0_GL01005134015190Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
MH0163_GL00835684003467CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0322_GL00008774027489Lack 3'-endK05810COG1496unknownunknown100.0100.0100.0
V1.FI17_GL01528724013998CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
V1.UC17-2_GL00427254014664CompleteK03784COG0813Firmicutesunknown100.0100.0100.0
MH0333_GL00534724006856CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0012_GL01107594000724CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-51A_GL01157693997427CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.UC50-1_GL01986183994644CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0046_GL00148254042915Lack 5'-endK05810COG1496BacteroidetesBacteroides100.0100.0100.0
V1.CD3-0-PN_GL00791804012854CompleteK03784COG0813FirmicutesClostridium100.0100.0100.0
585501.HMPREF6123_10064000150CompleteK03784COG0813FirmicutesOribacterium100.0100.0100.0
MH0025_GL00524154000927CompleteK03784COG0813Spirochaetesunknown100.0100.0100.0
MH0370_GL01268334070665Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
MH0431_GL01396844009520Lack 5'-endK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
O2.UC11-1_GL00112914010640CompleteK03784COG0813FirmicutesDorea100.0100.0100.0
O2.UC6-1_GL00682084096134Lack 3'-endK03784COG0813Firmicutesunknown100.0100.0100.0
562983.HMPREF0433_005734000135CompleteK05810COG1496FirmicutesGemella100.0100.0100.0
MH0265_GL01342514068375Lack both endsK05810COG1496FirmicutesVeillonella100.0100.0100.0
MH0403_GL01512294092509Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
V1.UC50-1_GL00882604036347Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
MH0275_GL00832754005770CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0410_GL00179254050821Lack 5'-endK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
MH0453_GL01461794010285CompleteK03784COG0813unknownunknown100.0100.0100.0
O2.UC48-0_GL02691744095799Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
V1.FI19_GL01165054035033CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0006_GL00404894063150CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0277_GL00336814068701CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0450_GL02100474010206CompleteK03784COG0813unknownunknown100.0100.0100.0
V1.FI13_GL01714894055729Lack 5'-endK03783COG0005Firmicutesunknown100.0100.0100.0
V1.FI24_GL00271804035088Lack 3'-endK05810COG1496FirmicutesSelenomonas100.0100.0100.0
MH0182_GL00428604108144CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0266_GL00000734068381CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0437_GL01706904156129Lack both endsK03784COG0813Firmicutesunknown100.0100.0100.0
O2.UC20-1_GL00457124094762Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
V1.UC38-4_GL00051874140294Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
MH0400_GL00492384154889Lack both endsK00777NOG09378FirmicutesStreptococcus100.0100.0100.0
O2.UC1-2_GL00949854115130Lack both endsK03784COG0813unknownunknown100.0100.0100.0
V1.FI07_GL00621854118082Lack 5'-endK03784COG0813FirmicutesFaecalibacterium100.0100.0100.0
NOM026_GL00594604037607Lack 3'-endK05810COG1496unknownunknown100.0100.0100.0
MH0270_GL00978874173428Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
MH0406_GL01604294198673Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
T2D-31A_GL00768644229671Lack 3'-endK05810COG1496Firmicutesunknown100.0100.0100.0
V1.FI33_GL00296304182758Lack 5'-endK03783COG0005Firmicutesunknown100.0100.0100.0
MH0102_GL00461544106614Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0313_GL01130874174242Lack 5'-endK05810COG1496unknownunknown100.0100.0100.0
MH0359_GL01632764218676Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
SZEY-22A_GL00855764185909Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
360104.CCC13826_18914145854CompleteunknownNOG13647ProteobacteriaCampylobacter100.0100.0100.0
MH0012_GL02217324146814CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0143_GL01262914065738CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0345_GL00829544153305Lack 5'-endK03783COG0005unknownunknown100.0100.0100.0
MH0126_GL00771364107066CompleteK03784COG0813unknownunknown100.0100.0100.0
MH0375_GL00719424154214CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0415_GL00389594285175Lack 5'-endK00772COG0005unknownunknown100.0100.0100.0
O2.UC24-1_GL01076534309139Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
DOF003_GL00105294184672Lack 3'-endK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0118_GL00358234321781Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0402_GL00942124241288Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
O2.CD2-0_GL00574164308420CompleteK05810COG1496unknownunknown100.0100.0100.0
MH0396_GL01005314241125CompleteK03784COG0813unknownunknown100.0100.0100.0
T2D-140A_GL00793844294490CompleteK03783COG0005FirmicutesFaecalibacterium100.0100.0100.0
V1.CD54-0_GL00076114311423Lack 3'-endK05810COG1496unknownunknown100.0100.0100.0
V1.CD30-0_GL01113514267452Lack 5'-endK03783COG0005BacteroidetesBacteroides100.0100.0100.0
V1.UC55-0_GL00534414313860Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0092_GL00141784409539Lack 5'-endK00772COG0005unknownunknown100.0100.0100.0
MH0390_GL02206534416535Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
MH0427_GL00360774329137CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
V1.UC52-1_GL01177894401998Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
764588959-stool1_revised4407278CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0298_GL01575714325802CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0427_GL00352554329136CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
O2.UC7-1_GL00160064332332Lack 3'-endK05810COG1496unknownunknown100.0100.0100.0
V1.UC10-2_GL00240524334620CompleteK03783COG0005unknownunknown100.0100.0100.0
MH0057_GL00435144320742CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
706846339-stool1_revised4406707Lack 3'-endK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0229_GL02071554390681Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
MH0409_GL00015484394938Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
T2D-31A_GL00004684338520Lack 3'-endK03783COG0005FirmicutesStreptococcus100.0100.0100.0
V1.CD32-4_GL00999194377417Lack 3'-endK05810COG1496unknownunknown100.0100.0100.0
160765029-stool1_revised4384796Lack 3'-endK03783COG0005Bacteroidetesunknown100.0100.0100.0
MH0011_GL00733844408289Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0090_GL00273494365637CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
765560005-stool1_revised4499122Lack 3'-endK05810COG1496ProteobacteriaHaemophilus100.0100.0100.0
T2D-51A_GL01273764427394Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0187_GL00761744389615CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
DLM018_GL00503864380815CompleteK03783COG0005Bacteroidetesunknown100.0100.0100.0
DOM026_GL00743424494349Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
MH0274_GL00974824391653CompleteK03783COG0005unknownunknown100.0100.0100.0
T2D-146A_GL00233184519436Lack 3'-endK05810COG1496ProteobacteriaHaemophilus100.0100.0100.0
V1.FI06_GL00053764445232Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
NOM004_GL00248274541985Lack 5'-endK03784COG0813FusobacteriaFusobacterium100.0100.0100.0
V1.UC26-4_GL01478434539941Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
MH0079_GL00036944277342CompleteK05810COG1496unknownunknown100.0100.0100.0
O2.UC6-1_GL00690534632389Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
V1.CD3-0-PT_GL00640304585122Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
T2D-78A_GL01062644615702Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
158499257-stool1_revised4616417Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
MH0211_GL00078864671619Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
O2.UC40-0_GL00545454679978Lack 5'-endK03784COG0813unknownunknown100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
speciesSubdoligranulum_unclassified0.4184.73e-802.23e-77
genusSubdoligranulum0.4159.68e-792.28e-76
familyRuminococcaceae0.4121.43e-772.25e-75
speciesCoprococcus_catus0.383.39e-654e-63
orderClostridiales0.3529.15e-567.21e-54
classClostridia0.3529.17e-567.21e-54
genusCoprococcus0.3476.6e-544.45e-52
phylumFirmicutes0.3353e-501.77e-48
speciesCollinsella_aerofaciens0.3066.6e-423.46e-40
speciesRuminococcus_obeum0.3011.81e-408.54e-39
classBacteroidia-0.3012.45e-409e-39
orderBacteroidales-0.3012.45e-409e-39
phylumBacteroidetes-0.3012.48e-409e-39
classMethanobacteria0.2972.5e-397.37e-38
orderMethanobacteriales0.2972.5e-397.37e-38
familyMethanobacteriaceae0.2972.5e-397.37e-38
genusMethanobrevibacter0.2956.37e-391.77e-37
speciesMethanobrevibacter_smithii0.2931.86e-384.88e-37
speciesEubacterium_siraeum0.2932.99e-387.43e-37
genusDorea0.2933.19e-387.53e-37
genusCollinsella0.2925.52e-381.24e-36
speciesCoprococcus_comes0.291.21e-372.6e-36
speciesDorea_formicigenerans0.291.34e-372.75e-36
phylumEuryarchaeota0.2893.31e-376.51e-36
speciesAnaerotruncus_unclassified0.2759.71e-341.83e-32
speciesRuminococcus_gnavus-0.2718.1e-331.47e-31
orderCoriobacteriales0.271.44e-322.43e-31
familyCoriobacteriaceae0.271.44e-322.43e-31
speciesEubacterium_ramulus0.2683.99e-326.49e-31
speciesEubacterium_hallii0.2642.99e-314.7e-30
speciesDorea_longicatena0.2637.44e-311.13e-29
familyBacteroidales_noname0.2472.35e-273.26e-26
genusBacteroidales_noname0.2472.35e-273.26e-26
speciesBacteroidales_bacterium_ph80.2472.35e-273.26e-26
genusRuminococcus0.2472.7e-273.64e-26
genusBarnesiella0.2364.4e-255.61e-24
speciesBarnesiella_intestinihominis0.2364.4e-255.61e-24
phylumActinobacteria0.2331.87e-242.26e-23
classActinobacteria0.2331.87e-242.26e-23
genusPseudoflavonifractor0.2313.62e-244.17e-23
speciesPseudoflavonifractor_capillosus0.2313.62e-244.17e-23
genusAdlercreutzia0.2299.56e-241.05e-22
speciesAdlercreutzia_equolifaciens0.2299.56e-241.05e-22
speciesBifidobacterium_adolescentis0.2263.92e-234.21e-22
speciesClostridium_leptum0.2255.85e-236.14e-22
speciesAlistipes_senegalensis0.2257.5e-237.7e-22
genusButyrivibrio0.2241.18e-221.19e-21
genusFaecalibacterium0.227.04e-226.78e-21
speciesFaecalibacterium_prausnitzii0.227.04e-226.78e-21
speciesClostridium_bolteae-0.2181.51e-211.43e-20
genusAnaerotruncus0.2162.93e-212.71e-20
speciesLachnospiraceae_bacterium_9_1_43BFAA-0.2154.88e-214.43e-20
familyEubacteriaceae0.2146.71e-215.98e-20
genusEubacterium0.2146.91e-216.04e-20
phylumVerrucomicrobia0.2149.36e-217.36e-20
classVerrucomicrobiae0.2149.36e-217.36e-20
orderVerrucomicrobiales0.2149.36e-217.36e-20
familyVerrucomicrobiaceae0.2149.36e-217.36e-20
genusAkkermansia0.2149.36e-217.36e-20
speciesAkkermansia_muciniphila0.2149.36e-217.36e-20
speciesOlsenella_unclassified0.2095.5e-204.26e-19
speciesAnaerostipes_hadrus0.2088.31e-206.33e-19
speciesRoseburia_hominis0.2088.69e-206.51e-19
speciesBacteroides_caccae0.2071.79e-191.31e-18
speciesRuminococcus_lactaris0.2071.81e-191.31e-18
speciesBifidobacterium_longum0.2044.2e-193e-18
familyBacteroidaceae-0.2045.31e-193.69e-18
genusBacteroides-0.2045.31e-193.69e-18
speciesLachnospiraceae_bacterium_7_1_58FAA0.2036.32e-194.32e-18
speciesMethanobrevibacter_unclassified0.2021.06e-187.15e-18
speciesRuminococcus_bromii0.1985.69e-183.78e-17
speciesMitsuokella_unclassified0.1979.27e-186.08e-17
genusBifidobacterium0.1961.25e-177.99e-17
genusMitsuokella0.1961.26e-177.99e-17
familyLachnospiraceae0.1961.27e-177.99e-17
orderBifidobacteriales0.1961.36e-178.34e-17
familyBifidobacteriaceae0.1961.36e-178.34e-17
speciesCoprobacillus_unclassified-0.1934.47e-172.7e-16
familyOxalobacteraceae0.191.35e-168.07e-16
speciesLachnospiraceae_bacterium_3_1_46FAA0.1891.42e-168.38e-16
genusOxalobacter0.1891.57e-169.04e-16
speciesOxalobacter_formigenes0.1891.57e-169.04e-16
speciesCoprococcus_sp_ART55_10.1882.68e-161.52e-15
genusOlsenella0.1864.85e-162.73e-15
speciesEubacterium_ventriosum0.1841.05e-155.83e-15
speciesAlistipes_shahii0.1821.82e-159.99e-15
familyFusobacteriaceae-0.1761.67e-149.06e-14
speciesClostridium_clostridioforme-0.1752.62e-141.41e-13
phylumFusobacteria-0.1742.98e-141.55e-13
classFusobacteriia-0.1742.98e-141.55e-13
orderFusobacteriales-0.1742.98e-141.55e-13
genusCoprobacillus-0.1743.04e-141.56e-13
genusFusobacterium-0.1743.35e-141.7e-13
speciesButyrivibrio_crossotus0.1719.55e-144.8e-13
speciesClostridiales_bacterium_1_7_47FAA-0.1692.23e-131.11e-12
speciesRuminococcus_sp_5_1_39BFAA0.1682.52e-131.24e-12
speciesClostridium_ramosum-0.1682.6e-131.27e-12
genusCoprobacter0.1656.67e-133.18e-12
speciesCoprobacter_fastidiosus0.1656.67e-133.18e-12
speciesClostridium_symbiosum-0.1631.3e-126.14e-12
speciesEubacterium_biforme0.1621.6e-127.48e-12
speciesEubacterium_eligens0.1621.64e-127.59e-12
genusAnaerostipes0.1622.04e-129.35e-12
speciesAlistipes_finegoldii0.1585.95e-122.7e-11
speciesLachnospiraceae_bacterium_6_1_63FAA-0.1586.35e-122.85e-11
speciesEubacterium_rectale0.1541.98e-118.82e-11
speciesStreptococcus_thermophilus0.1524.27e-111.88e-10
genusRuminococcaceae_noname0.156.75e-112.92e-10
speciesRuminococcaceae_bacterium_D160.156.75e-112.92e-10
speciesFusobacterium_varium-0.1499.27e-113.98e-10
speciesBacteroides_thetaiotaomicron-0.1481.25e-105.32e-10
genusFlavonifractor-0.1462.25e-109.4e-10
speciesFlavonifractor_plautii-0.1462.25e-109.4e-10
speciesCoprococcus_eutactus0.1462.42e-101e-09
speciesAlistipes_indistinctus0.1435.31e-102.18e-09
speciesHoldemania_filiformis0.1382.22e-099.03e-09
speciesErysipelotrichaceae_bacterium_21_30.1372.5e-091.01e-08
speciesClostridium_nexile-0.1373.05e-091.22e-08
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.1354.38e-091.74e-08
speciesRuminococcus_torques0.1346.45e-092.54e-08
speciesAnaerostipes_unclassified-0.1337.5e-092.93e-08
speciesAlistipes_onderdonkii0.1291.98e-087.65e-08
familyRikenellaceae0.1292.01e-087.65e-08
genusAlistipes0.1292.01e-087.65e-08
speciesRuminococcus_champanellensis0.1282.67e-081.01e-07
speciesKlebsiella_pneumoniae-0.1273.51e-081.31e-07
speciesLachnospiraceae_bacterium_5_1_63FAA0.1273.84e-081.43e-07
genusKlebsiella-0.1264.09e-081.51e-07
genusOdoribacter0.1264.58e-081.67e-07
speciesClostridium_citroniae-0.1264.6e-081.67e-07
speciesClostridium_sp_L2_500.1264.86e-081.75e-07
classErysipelotrichia0.1255.79e-082.04e-07
orderErysipelotrichales0.1255.79e-082.04e-07
familyErysipelotrichaceae0.1255.79e-082.04e-07
familyActinomycetaceae0.1256.04e-082.11e-07
speciesBacteroides_ovatus-0.1247.87e-082.73e-07
orderActinomycetales0.1211.58e-075.44e-07
genusActinomyces0.121.91e-076.53e-07
speciesFusobacterium_ulcerans-0.122.05e-076.91e-07
speciesBacteroides_fragilis-0.122.05e-076.91e-07
genusLachnospiraceae_noname0.122.09e-077e-07
genusErysipelotrichaceae_noname0.1174.08e-071.36e-06
familyPeptostreptococcaceae0.1174.29e-071.42e-06
speciesEscherichia_coli-0.1155.86e-071.92e-06
speciesMegamonas_unclassified-0.1156.21e-072.02e-06
speciesAlistipes_sp_AP110.1156.4e-072.07e-06
speciesTuricibacter_sanguinis0.1156.59e-072.11e-06
genusMegamonas-0.1156.63e-072.11e-06
phylumProteobacteria-0.1138.73e-072.77e-06
speciesOdoribacter_splanchnicus0.1131.02e-063.21e-06
speciesTuricibacter_unclassified0.1121.24e-063.88e-06
genusTuricibacter0.1121.31e-064.07e-06
speciesPeptostreptococcaceae_noname_unclassified0.1111.36e-064.2e-06
speciesButyrivibrio_unclassified0.1111.58e-064.81e-06
speciesRuminococcus_callidus0.1111.58e-064.81e-06
genusGordonibacter0.111.72e-065.17e-06
speciesGordonibacter_pamelaeae0.111.72e-065.17e-06
speciesBacteroides_pectinophilus0.111.73e-065.17e-06
classGammaproteobacteria-0.1092.28e-066.77e-06
genusPantoea-0.1092.55e-067.48e-06
speciesPantoea_unclassified-0.1092.55e-067.48e-06
genusHoldemania0.1082.6e-067.58e-06
speciesBacteroides_xylanisolvens-0.1082.71e-067.85e-06
speciesBacteroides_plebeius0.1082.96e-068.52e-06
genusMethanosphaera0.1064.24e-061.21e-05
speciesMethanosphaera_stadtmanae0.1064.24e-061.21e-05
speciesEubacterium_dolichum-0.1046.28e-061.77e-05
genusEscherichia-0.1046.5e-061.83e-05
orderEnterobacteriales-0.1046.6e-061.83e-05
familyEnterobacteriaceae-0.1046.6e-061.83e-05
speciesPropionibacterium_freudenreichii0.1037.33e-062.02e-05
speciesStreptococcus_parasanguinis0.1011.16e-053.18e-05
genusClostridiales_noname-0.11.36e-053.71e-05
speciesAlistipes_putredinis0.11.46e-053.96e-05
genusBlautia0.11.56e-054.21e-05
speciesLachnospiraceae_bacterium_5_1_57FAA-0.11.6e-054.29e-05
genusDialister0.0982.02e-055.39e-05
speciesLachnospiraceae_bacterium_1_4_56FAA-0.0962.93e-057.77e-05
speciesParaprevotella_unclassified0.0963.07e-058.1e-05
genusParaprevotella0.0963.18e-058.34e-05
genusPeptostreptococcaceae_noname0.0954.22e-050.00011
speciesBifidobacterium_catenulatum0.0944.27e-050.000111
speciesLactococcus_lactis0.0935.41e-050.00014
genusDesulfovibrio0.0935.91e-050.000152
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speciesDorea_unclassified-0.080.0005640.0013
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genusSutterella0.0640.005360.0105
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familySynergistaceae-0.0640.005670.0109
genusVeillonella-0.0630.00620.0119
speciesLactobacillus_delbrueckii0.0630.006780.013
speciesLactococcus_phage_phi70.0620.00690.0131
speciesDesulfovibrio_piger0.0620.006990.0133
speciesBacteroides_cellulosilyticus0.0620.007680.0145
speciesBifidobacterium_breve-0.0610.007830.0147
speciesLachnospiraceae_bacterium_1_1_57FAA0.0610.00790.0148
familyClostridiales_noname-0.060.009290.0173
speciesOdoribacter_laneus0.060.009290.0173
genusParabacteroides-0.060.009530.0176
speciesMegamonas_funiformis-0.060.009650.0178
speciesLactobacillus_amylovorus-0.0590.01060.0195
familyMyoviridae-0.0580.01180.0216
speciesParabacteroides_sp_D130.0580.01210.0221
genusRothia0.0580.01250.0227
speciesMegamonas_rupellensis-0.0580.01260.0228
familyMicrococcaceae0.0570.01340.0241
genusC2likevirus0.0570.01380.0248
familyPropionibacteriaceae0.0570.01440.0256
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speciesRoseburia_intestinalis0.0570.01450.0257
speciesLachnospiraceae_bacterium_8_1_57FAA0.0560.01460.0258
speciesStreptococcus_pasteurianus-0.0560.01470.0259
speciesClostridium_sp_ATCC_BAA_442-0.0560.01510.0265
genusSiphoviridae_noname0.0560.01520.0266
speciesC2likevirus_unclassified0.0560.01610.028
familyOscillospiraceae0.0550.01690.0291
genusOscillibacter0.0550.01690.0291
speciesLactobacillus_acidophilus0.0550.01690.0291
speciesEnterobacter_cloacae-0.0550.01710.0293
familySiphoviridae0.0550.01740.0298
speciesAggregatibacter_segnis0.0550.01780.0303
genusEnterobacter-0.0550.01820.0308
speciesRuminococcus_sp_JC3040.0550.01820.0308
speciesRoseburia_unclassified0.0540.01840.031
speciesHaemophilus_parainfluenzae-0.0540.01930.0324
speciesCollinsella_intestinalis-0.0540.02030.0338
genusHaemophilus-0.0540.02040.0338
speciesBacteroides_barnesiae0.0540.02040.0338
speciesRothia_mucilaginosa0.0540.02040.0338
phylumViruses_noname0.0520.02370.039
classViruses_noname0.0520.02370.039
speciesBacteroides_coprophilus0.0520.0240.0393
speciesParabacteroides_sp_20_30.0520.02510.041
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familyPasteurellaceae-0.0520.02530.041
genusLeuconostoc0.0510.02610.0422
speciesLactobacillus_ruminis0.0510.02640.0425
genusMorganella-0.050.03050.0488
speciesMorganella_morganii-0.050.03050.0488
familyClostridiales_Family_XI_Incertae_Sedis0.050.03150.0502
speciesVeillonella_atypica-0.050.03220.0512
genusPeptostreptococcus0.0490.03310.0524
speciesBifidobacterium_dentium0.0490.0350.0553
speciesOscillibacter_sp_KLE_1728-0.0480.03820.0598
classDeltaproteobacteria0.0480.03840.0598
orderDesulfovibrionales0.0480.03840.0598
familyDesulfovibrionaceae0.0480.03840.0598
speciesLactobacillus_casei_paracasei0.0470.04040.0627
speciesCollinsella_tanakaei-0.0470.04070.063
speciesCitrobacter_freundii-0.0470.04090.0631
genusAggregatibacter0.0470.04130.0635
speciesCoriobacteriaceae_bacterium_phI0.0470.04260.0653
orderViruses_noname0.0470.04310.0658
genusCoriobacteriaceae_noname0.0470.04350.0662
speciesAlistipes_sp_HGB50.0470.04360.0662
genusMyoviridae_noname-0.0470.04420.0669
speciesPeptostreptococcus_stomatis0.0460.04750.0716
speciesLactococcus_garvieae-0.0450.05030.0756
speciesParabacteroides_goldsteinii0.0450.05120.0767
genusClostridium-0.0450.05150.0769
speciesAcidaminococcus_intestini-0.0450.05280.0786
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.0440.05550.0823
speciesPeptostreptococcus_anaerobius0.0440.05570.0823
speciesSubdoligranulum_sp_4_3_54A2FAA0.0440.05580.0823
speciesCampylobacter_concisus0.0440.05680.0835
speciesStreptococcus_gordonii0.0430.06110.0896
familyClostridiaceae-0.0430.06340.0926
speciesParvimonas_unclassified0.0430.06390.0931
genusParvimonas0.0430.06430.0934
speciesStreptococcus_sanguinis0.0430.06610.0957
genusButyricimonas0.0420.06720.0967
speciesButyricimonas_synergistica0.0420.06720.0967
speciesOdoribacter_unclassified0.0420.0680.0976
speciesVeillonella_dispar-0.0420.06910.0988
speciesVeillonella_unclassified-0.0420.07020.1
speciesBlautia_hydrogenotrophica0.0410.07830.111
speciesAnaerotruncus_colihominis-0.0410.07920.112
speciesAcidaminococcus_fermentans0.040.08250.117
genusCitrobacter-0.040.08280.117
speciesMitsuokella_multacida0.040.08320.117
speciesPorphyromonas_uenonis0.040.0870.122
speciesGemella_morbillorum0.0390.0890.124
speciesLactococcus_phage_936_sensu_lato0.0390.08950.125
familyBacillales_noname0.0390.09580.133
genusGemella0.0390.09580.133
speciesBilophila_wadsworthia0.0380.09950.137
orderCaudovirales0.0380.1030.141
speciesCitrobacter_unclassified-0.0380.1030.141
speciesEnterobacter_aerogenes-0.0370.1080.147
speciesClostridium_spiroforme0.0370.1080.147
familyViruses_noname-0.0360.1160.157
genusViruses_noname-0.0360.1160.157
speciesPrevotella_stercorea-0.0360.120.162
speciesLactobacillus_reuteri0.0360.1240.167
genusAcidaminococcaceae_unclassified0.0350.130.175
speciesBacteroides_sp_3_1_19-0.0350.1320.177
genusParasutterella0.0350.1350.18
speciesParasutterella_excrementihominis0.0350.1350.18
speciesStreptococcus_mitis_oralis_pneumoniae-0.0340.1390.185
speciesStreptococcus_anginosus0.0340.140.186
speciesStreptococcus_infantarius-0.0340.1450.192
genusPeptoniphilus0.0330.1480.195
speciesLactobacillus_vaginalis0.0330.1560.205
speciesLactobacillus_plantarum0.0330.1590.208
orderBacillales0.0320.1620.212
speciesBacteroides_sp_4_3_47FAA0.0320.1690.22
familyBurkholderiales_noname0.0310.1770.23
genusBurkholderiales_noname0.0310.1780.23
speciesBurkholderiales_bacterium_1_1_470.0310.1780.23
speciesStreptococcus_vestibularis0.030.190.244
speciesOscillibacter_sp_KLE_1745-0.030.190.244
genusTunalikevirus-0.030.1920.246
speciesStreptococcus_mutans0.030.1960.251
speciesStreptococcus_lutetiensis-0.030.2010.256
familyVeillonellaceae-0.0290.2140.272
speciesStreptococcus_phage_Sfi210.0290.2160.274
familyPorphyromonadaceae0.0290.2170.275
speciesBifidobacterium_angulatum0.0280.2230.281
speciesBacteroides_eggerthii0.0280.2230.281
genusRoseburia0.0280.2280.285
speciesWeissella_confusa-0.0280.2280.285
genusBilophila0.0270.2360.295
speciesKlebsiella_unclassified-0.0270.2440.304
familyCampylobacteraceae0.0270.2460.305
genusWeissella-0.0270.2460.305
speciesBifidobacterium_bifidum0.0260.2520.311
genusLambdalikevirus-0.0260.2630.324
speciesErysipelotrichaceae_bacterium_2_2_44A0.0260.2690.331
speciesSutterella_parvirubra-0.0250.2720.333
speciesBilophila_unclassified0.0250.2840.347
speciesBacteroides_sp_1_1_60.0240.2910.355
speciesSlackia_piriformis0.0240.2920.355
speciesRoseburia_inulinivorans0.0240.30.364
genusClostridiaceae_noname-0.0240.3090.373
speciesClostridiaceae_bacterium_JC118-0.0240.3090.373
familyLeuconostocaceae0.0240.310.373
genusCampylobacter0.0230.3130.376
speciesKlebsiella_sp_MS_92_3-0.0230.3170.38
speciesAcidaminococcus_unclassified-0.0230.3210.384
genusSutterellaceae_unclassified-0.0230.3280.391
genusProteus-0.0220.3460.411
speciesCoprobacillus_sp_D60.0220.3480.413
genusSlackia0.0220.350.414
speciesLactobacillus_rhamnosus0.0210.3530.417
familyPrevotellaceae-0.0210.360.424
classEpsilonproteobacteria0.0210.3620.424
orderCampylobacterales0.0210.3620.424
speciesKlebsiella_phage_KP36-0.0210.3650.426
speciesBacteroides_massiliensis-0.0210.3680.429
speciesBifidobacterium_pseudocatenulatum-0.020.3990.464
speciesBacteroides_clarus0.0190.410.475
speciesBacteroides_fluxus-0.0190.4150.48
orderPseudomonadales-0.0180.4390.507
speciesLactobacillus_gasseri0.0180.4410.508
speciesEggerthella_sp_1_3_56FAA-0.0180.4430.509
speciesLactobacillus_salivarius-0.0180.4450.51
speciesMegasphaera_micronuciformis-0.0170.4590.525
speciesClostridium_sp_KLE_1755-0.0170.4650.53
speciesPrevotella_buccae-0.0160.4760.541
genusActinobacillus0.0160.4780.541
speciesActinobacillus_unclassified0.0160.4780.541
speciesBacteroides_oleiciplenus-0.0150.5110.577
speciesLactobacillus_crispatus0.0150.5270.594
speciesLeuconostoc_lactis-0.0140.5550.622
speciesCoprobacillus_sp_29_10.0140.5550.622
familyPodoviridae0.0140.5560.622
speciesBacteroides_faecis0.0140.5580.623
genusAcidaminococcus-0.0130.5660.63
speciesBacteroides_intestinalis0.0130.570.633
speciesBacteroides_salanitronis0.0130.5850.648
speciesCollinsella_unclassified-0.0120.5950.658
speciesStreptococcus_australis-0.0120.6020.662
speciesParabacteroides_johnsonii0.0120.6020.662
speciesLactobacillus_fermentum0.0110.6490.712
speciesEubacterium_limosum0.010.6530.715
familyStaphylococcaceae-0.010.6550.716
speciesBacteroides_uniformis0.010.6570.716
orderAeromonadales-0.010.6680.726
speciesEnterococcus_faecium0.010.6750.732
speciesBacteroides_salyersiae-0.010.6760.732
genusEnterococcus0.0090.6940.75
speciesAlistipes_unclassified-0.0090.7120.767
speciesWeissella_cibaria-0.0080.7390.795
speciesBacteroides_dorei0.0080.7440.798
speciesLactococcus_phage_bIL670.0070.7470.8
familySutterellaceae0.0070.750.801
familyEnterococcaceae0.0070.7520.801
speciesLactobacillus_oris0.0070.770.819
speciesKlebsiella_oxytoca0.0070.7770.824
genusButyricicoccus-0.0060.8070.852
speciesButyricicoccus_pullicaecorum-0.0060.8070.852
speciesLactobacillus_mucosae-0.0060.8110.854
speciesHaemophilus_paraphrohaemolyticus0.0050.8190.861
speciesBacteroides_finegoldii-0.0050.8220.862
genusStaphylococcus-0.0050.8330.871
speciesEscherichia_unclassified-0.0050.8340.871
speciesLactobacillus_sanfranciscensis0.0050.8450.88
familySuccinivibrionaceae0.0040.8630.897
speciesBacteroides_nordii-0.0040.8650.897
speciesErysipelotrichaceae_bacterium_3_1_530.0040.880.911
orderBurkholderiales0.0030.8940.923
classNegativicutes-0.0030.9070.933
orderSelenomonadales-0.0030.9070.933
speciesMegasphaera_elsdenii-0.0030.9090.933
speciesHaemophilus_sputorum0.0020.9160.938
speciesEggerthella_lenta-0.0020.9380.958
speciesFusobacterium_nucleatum-0.0010.9480.966
speciesProteus_mirabilis-0.0010.950.966
speciesEnterococcus_faecalis-0.0010.9650.98
speciesClostridium_perfringens-0.0010.9750.987
speciesParabacteroides_distasonis-0.0010.9770.987
speciesPrevotella_bivia0.0010.980.988
genusSuccinatimonas0.00.9860.99
speciesSuccinatimonas_hippei0.00.9860.99
speciesBacteroides_sp_2_1_220.00.9910.993
classBetaproteobacteria0.00.9940.994
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Crohns diseaseSpain17660.01007313622790.0169432509740.0120512282697842528.0133
ObesityDenmark1691230.02034592719760.01964259531920.012341672828726168.60215
Type II diabetesSweden53920.01854307136790.02321835591710.02171647399448352.82763
Ulcerative colitisSpain78660.01679940225040.0169432509740.2024247651141072135.3665
Rheumatoid arthritisChina127980.01794777929750.0155032475740.3446802105271325444.1992
Colorectal cancerAustria64350.02154022373090.01738250553680.453120299651634155.2883
Liver cirrhosisChina1201140.01988584565020.01697440225220.4598355620092383080.0497
Type II diabetesDenmark752770.0205880782970.02010420459960.4650534464321972764.6638
Type II diabetesChina1831850.01309332939680.01242449553770.6165339791712317576.5888
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382