MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-01-24 10:18:36 PST
Job id & description: 2404, purine24
Query type: protein
Count queries & homologs: 14, 14
Min % identity & max e-value: 100%, 1e-5
Min % query & target coverage: 95%, 95%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
HT14A_GL00503034737647Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
V1.CD21-0_GL00095394780804Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
MH0179_GL00619384744322Lack 3'-endK03784COG0813ProteobacteriaCitrobacter100.0100.0100.0
MH0096_GL01141064792985Lack both endsK03784COG0813unknownunknown100.0100.0100.0
DLF012_GL00460514836123Lack 5'-endK03784COG0813FirmicutesEnterococcus100.0100.0100.0
MH0421_GL00186974880001Lack both endsK03784COG0813unknownunknown100.0100.0100.0
SZEY-20A_GL00275424943144Lack 5'-endK03784COG0813FirmicutesMegasphaera100.0100.0100.0
MH0031_GL00011225029753Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
MH0415_GL01748575152870Lack both endsK05810COG1496ProteobacteriaEscherichia100.0100.0100.0
MH0425_GL00809115211146Lack 3'-endK05810COG1496ProteobacteriaCitrobacter100.0100.0100.0
MH0383_GL01351775298127Lack 3'-endK03784COG0813FirmicutesStreptococcus100.0100.0100.0
T2D-132A_GL00365065431457Lack 3'-endK05810COG1496ProteobacteriaEnterobacter100.0100.0100.0
158944319-stool1_revised5588210Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
763860675-stool1_revised5685209Lack 3'-endK03784COG0813unknownunknown100.0100.0100.0
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
orderLactobacillales0.4021.57e-735.22e-71
classBacilli0.4022.21e-735.22e-71
familyStreptococcaceae0.4013.79e-735.96e-71
speciesStreptococcus_parasanguinis0.3983.79e-724.47e-70
genusStreptococcus0.3971.88e-711.77e-69
speciesStreptococcus_salivarius0.357.36e-555.79e-53
speciesStreptococcus_gordonii0.3375.67e-513.82e-49
speciesStreptococcus_vestibularis0.3339.5e-505.61e-48
speciesStreptococcus_anginosus0.329.7e-465.09e-44
speciesStreptococcus_mitis_oralis_pneumoniae0.3152.2e-441.04e-42
genusRothia0.3099.32e-434e-41
speciesRothia_mucilaginosa0.3091.22e-424.57e-41
familyMicrococcaceae0.3091.26e-424.57e-41
orderActinomycetales0.33.69e-401.24e-38
speciesCitrobacter_freundii0.2924.71e-381.48e-36
speciesStreptococcus_sanguinis0.2893.2e-379.44e-36
genusCitrobacter0.271.06e-322.94e-31
genusLactobacillus0.2692.03e-325.32e-31
speciesCitrobacter_unclassified0.2692.2e-325.47e-31
familyLactobacillaceae0.2677.42e-321.75e-30
familyBacillales_noname0.2644.41e-319.46e-30
genusGemella0.2644.41e-319.46e-30
genusVeillonella0.2635.24e-311.08e-29
speciesStreptococcus_mutans0.2635.95e-311.17e-29
genusActinomyces0.2581.01e-291.91e-28
familyActinomycetaceae0.2571.38e-292.51e-28
speciesVeillonella_unclassified0.2522.21e-283.86e-27
genusEnterobacter0.2448.47e-271.43e-25
speciesBifidobacterium_dentium0.2431.72e-262.8e-25
speciesEnterobacter_cloacae0.2413.98e-266.23e-25
speciesVeillonella_dispar0.2414.09e-266.23e-25
orderBacillales0.2414.9e-267.23e-25
familyOscillospiraceae-0.247.16e-269.94e-25
genusOscillibacter-0.247.16e-269.94e-25
speciesVeillonella_parvula0.2372.33e-253.14e-24
classBacteroidia-0.2356.55e-258.17e-24
orderBacteroidales-0.2356.55e-258.17e-24
phylumBacteroidetes-0.2356.58e-258.17e-24
speciesVeillonella_atypica0.2323.37e-244.08e-23
speciesStreptococcus_australis0.2313.69e-244.35e-23
speciesOscillibacter_unclassified-0.2291.26e-231.45e-22
classGammaproteobacteria0.2264.37e-234.91e-22
speciesCampylobacter_concisus0.2214.23e-224.55e-21
speciesMegasphaera_micronuciformis0.2214.24e-224.55e-21
speciesLactobacillus_salivarius0.2121.88e-201.97e-19
speciesLactobacillus_gasseri0.2095.58e-205.73e-19
speciesHaemophilus_parainfluenzae0.2095.81e-205.83e-19
genusHaemophilus0.2095.93e-205.83e-19
orderPasteurellales0.2096.74e-206.36e-19
familyPasteurellaceae0.2096.74e-206.36e-19
familyBacteroidaceae-0.2081.03e-199.35e-19
genusBacteroides-0.2081.03e-199.35e-19
speciesLactobacillus_fermentum0.2061.96e-191.75e-18
speciesKlebsiella_oxytoca0.2052.8e-192.45e-18
speciesFusobacterium_nucleatum0.1924.88e-174.19e-16
speciesLactobacillus_vaginalis0.1882.04e-161.72e-15
familyCampylobacteraceae0.1874.12e-163.41e-15
genusCampylobacter0.1865.01e-164.08e-15
speciesBacteroides_uniformis-0.1831.49e-151.19e-14
classEpsilonproteobacteria0.1821.93e-151.49e-14
orderCampylobacterales0.1821.93e-151.49e-14
orderEnterobacteriales0.1813.01e-152.26e-14
familyEnterobacteriaceae0.1813.01e-152.26e-14
familyEnterococcaceae0.1795.83e-154.3e-14
genusActinobacillus0.1796.45e-154.61e-14
speciesActinobacillus_unclassified0.1796.45e-154.61e-14
genusEnterococcus0.1771.13e-147.96e-14
speciesLactobacillus_oris0.1761.54e-141.07e-13
genusAggregatibacter0.1752.36e-141.61e-13
speciesClostridium_perfringens0.1752.79e-141.88e-13
genusKlebsiella0.1743.6e-142.39e-13
speciesPrevotella_buccae0.1726.17e-144.04e-13
genusSolobacterium0.1728.15e-145.2e-13
speciesSolobacterium_moorei0.1728.15e-145.2e-13
speciesLactobacillus_mucosae0.1682.38e-131.5e-12
genusParabacteroides-0.1682.97e-131.83e-12
speciesLactobacillus_rhamnosus0.1682.99e-131.83e-12
familyPeptostreptococcaceae0.1641.09e-126.6e-12
familyPorphyromonadaceae-0.163.92e-122.34e-11
speciesEscherichia_unclassified0.1594.52e-122.67e-11
familyLeuconostocaceae0.1578.02e-124.67e-11
speciesWeissella_cibaria0.1561.35e-117.77e-11
genusPeptostreptococcaceae_noname0.1532.68e-111.52e-10
phylumFirmicutes0.1515.6e-113.15e-10
classDeltaproteobacteria-0.156.17e-113.35e-10
orderDesulfovibrionales-0.156.17e-113.35e-10
familyDesulfovibrionaceae-0.156.17e-113.35e-10
speciesWeissella_confusa0.1499.52e-115.11e-10
genusWeissella0.1481.19e-106.31e-10
speciesKlebsiella_pneumoniae0.1481.21e-106.35e-10
genusBilophila-0.1461.98e-101.03e-09
speciesBilophila_unclassified-0.1462.42e-101.24e-09
speciesLactobacillus_crispatus0.1462.55e-101.29e-09
speciesLactobacillus_delbrueckii0.1443.61e-101.81e-09
speciesBacteroides_ovatus-0.1443.68e-101.83e-09
speciesHaemophilus_sputorum0.1434.57e-102.25e-09
speciesAggregatibacter_segnis0.1435.55e-102.7e-09
genusLactococcus0.1427.86e-103.79e-09
speciesEnterococcus_faecalis0.141.27e-096.05e-09
genusFlavonifractor-0.1391.76e-098.22e-09
speciesFlavonifractor_plautii-0.1391.76e-098.22e-09
speciesStreptococcus_thermophilus0.1381.87e-098.65e-09
speciesLactobacillus_casei_paracasei0.1372.56e-091.17e-08
speciesLachnospiraceae_bacterium_7_1_58FAA-0.1363.59e-091.63e-08
phylumProteobacteria0.1354.23e-091.9e-08
genusEscherichia0.1329.42e-094.19e-08
genusPeptostreptococcus0.1292.18e-089.62e-08
speciesLactococcus_garvieae0.1273.27e-081.41e-07
speciesPeptostreptococcus_stomatis0.1273.28e-081.41e-07
genusPantoea0.1273.31e-081.41e-07
speciesPantoea_unclassified0.1273.31e-081.41e-07
speciesClostridium_bartlettii0.1273.61e-081.52e-07
familyRikenellaceae-0.1264.25e-081.76e-07
genusAlistipes-0.1264.25e-081.76e-07
speciesLactococcus_lactis0.1231e-074.1e-07
speciesBilophila_wadsworthia-0.122e-078.14e-07
speciesBacteroides_thetaiotaomicron-0.1192.37e-079.56e-07
speciesEnterococcus_faecium0.1182.79e-071.12e-06
genusOlsenella0.1182.82e-071.12e-06
genusMegasphaera0.1156.33e-072.49e-06
speciesEnterobacter_aerogenes0.1148.18e-073.19e-06
speciesBacteroides_vulgatus-0.1139.04e-073.5e-06
genusLeuconostoc0.1121.34e-065.14e-06
familyLachnospiraceae0.111.84e-067e-06
speciesEscherichia_coli0.1092.51e-069.48e-06
speciesGemella_morbillorum0.1082.85e-061.07e-05
speciesAnaerotruncus_colihominis-0.1064.04e-061.5e-05
genusHoldemania-0.1037.51e-062.77e-05
genusOdoribacter-0.1011.1e-054.02e-05
phylumActinobacteria0.1011.16e-054.18e-05
classActinobacteria0.1011.16e-054.18e-05
speciesOlsenella_unclassified0.11.34e-054.79e-05
speciesClostridium_citroniae-0.0991.77e-056.28e-05
speciesHaemophilus_paraphrohaemolyticus0.0981.99e-057.01e-05
classErysipelotrichia0.0982.39e-058.23e-05
orderErysipelotrichales0.0982.39e-058.23e-05
familyErysipelotrichaceae0.0982.39e-058.23e-05
speciesLeuconostoc_lactis0.0972.41e-058.24e-05
genusErysipelotrichaceae_noname0.0972.49e-058.46e-05
speciesOdoribacter_splanchnicus-0.0972.79e-059.41e-05
genusBlautia0.0963e-050.0001
genusAnaerotruncus-0.0963.13e-050.000104
speciesKlebsiella_unclassified0.0953.63e-050.00012
orderBurkholderiales-0.0945.1e-050.000167
speciesParvimonas_unclassified0.0935.39e-050.000175
genusParvimonas0.0935.42e-050.000175
speciesTuricibacter_sanguinis0.0935.71e-050.000183
speciesStreptococcus_lutetiensis0.0935.93e-050.000189
speciesOscillibacter_sp_KLE_1745-0.0917.81e-050.000247
speciesClostridium_asparagiforme-0.0918.72e-050.000274
speciesAlistipes_shahii-0.098.93e-050.000279
familyClostridiales_noname-0.099.96e-050.000309
orderBifidobacteriales0.0890.0001260.000386
familyBifidobacteriaceae0.0890.0001260.000386
speciesAlistipes_indistinctus-0.0880.0001390.000423
speciesParabacteroides_unclassified-0.0880.0001420.00043
classBetaproteobacteria-0.0880.0001510.000454
familyClostridiales_Family_XI_Incertae_Sedis0.0870.0001660.000496
genusTuricibacter0.0870.0001690.000502
genusClostridiaceae_noname-0.0860.0001810.000527
speciesClostridiaceae_bacterium_JC118-0.0860.0001810.000527
speciesClostridium_bolteae-0.0860.0001810.000527
speciesStreptococcus_infantarius0.0850.0002380.000689
speciesBacteroides_cellulosilyticus-0.0840.0002820.00081
speciesParabacteroides_distasonis-0.0840.0002830.00081
genusBifidobacterium0.0840.0002850.00081
familyVeillonellaceae0.0830.0003060.000865
speciesBacteroides_dorei-0.0830.000310.000871
genusProteus0.0830.0003360.000938
familySutterellaceae-0.0820.0003760.00104
speciesCoprococcus_eutactus0.0810.0004780.00132
speciesCollinsella_aerofaciens0.080.000530.00145
phylumFusobacteria0.080.0005730.00155
classFusobacteriia0.080.0005730.00155
orderFusobacteriales0.080.0005730.00155
genusPropionibacterium0.0790.0006220.00167
classNegativicutes0.0780.0006840.00181
orderSelenomonadales0.0780.0006840.00181
speciesHoldemania_filiformis-0.0780.0007170.00189
speciesTuricibacter_unclassified0.0770.0008330.00218
speciesBacteroides_caccae-0.0770.0008760.00228
genusCoprobacillus0.0770.0008850.0023
speciesRuminococcus_sp_JC3040.0760.0010.00258
familyFusobacteriaceae0.0760.001030.00261
genusFusobacterium0.0760.001030.00261
speciesCoprobacillus_unclassified0.0760.001030.00261
speciesBacteroides_xylanisolvens-0.0750.001120.00283
genusPseudoflavonifractor-0.0750.001140.00285
speciesPseudoflavonifractor_capillosus-0.0750.001140.00285
speciesAlistipes_putredinis-0.0750.001190.00296
speciesBacteroides_pectinophilus0.0740.001280.00316
speciesClostridium_ramosum0.0740.00130.0032
speciesEubacterium_ventriosum-0.0730.00160.00391
familyPropionibacteriaceae0.0730.001680.00409
speciesEggerthella_sp_1_3_56FAA0.0730.00170.00411
speciesRuminococcus_obeum0.0720.001720.00414
speciesAlistipes_sp_AP11-0.0720.001840.00441
speciesAlistipes_onderdonkii-0.0720.001880.00448
speciesDesulfovibrio_desulfuricans-0.0720.001930.00458
familyMyoviridae0.0710.002170.00512
genusLachnospiraceae_noname0.0690.002920.00686
speciesParabacteroides_merdae-0.0690.0030.00701
speciesBifidobacterium_longum0.0680.003130.00728
speciesPrevotella_copri0.0680.00320.0074
classClostridia0.0680.003450.0079
orderClostridiales0.0680.003450.0079
speciesClostridium_nexile0.0680.003470.00791
speciesAlistipes_finegoldii-0.0670.003640.00826
genusMethanobrevibacter0.0660.004280.00967
genusPrevotella0.0660.004340.00975
speciesBifidobacterium_catenulatum0.0660.004430.00991
genusDorea0.0650.004660.0103
genusCoprobacter-0.0650.004680.0103
speciesCoprobacter_fastidiosus-0.0650.004680.0103
orderCoriobacteriales0.0650.004840.0106
familyCoriobacteriaceae0.0650.004840.0106
speciesMethanobrevibacter_smithii0.0650.005210.0113
speciesBacteroides_clarus-0.0650.005220.0113
speciesDorea_formicigenerans0.0640.005440.0117
speciesErysipelotrichaceae_bacterium_6_1_450.0640.005920.0127
classMethanobacteria0.0630.006140.013
orderMethanobacteriales0.0630.006140.013
familyMethanobacteriaceae0.0630.006140.013
speciesErysipelotrichaceae_bacterium_2_2_44A0.0630.006180.013
speciesClostridium_leptum-0.0630.006240.0131
familyBacteroidales_noname-0.0630.006460.0134
genusBacteroidales_noname-0.0630.006460.0134
speciesBacteroidales_bacterium_ph8-0.0630.006460.0134
speciesCoprococcus_catus0.0630.006750.0139
speciesBacteroides_stercoris-0.0620.0070.0144
speciesKlebsiella_sp_MS_92_30.0620.007490.0153
genusCollinsella0.0620.007790.0158
phylumViruses_noname0.0610.008480.0171
classViruses_noname0.0610.008480.0171
speciesLactobacillus_plantarum0.0610.008860.0178
speciesLactobacillus_reuteri0.060.009720.0194
speciesDorea_longicatena0.0590.01010.0201
speciesAnaerotruncus_unclassified-0.0590.01090.0216
genusRuminococcaceae_noname-0.0590.0110.0216
speciesRuminococcaceae_bacterium_D16-0.0590.0110.0216
speciesPeptostreptococcaceae_noname_unclassified0.0590.01130.0221
genusDesulfovibrio-0.0570.01330.0259
genusSiphoviridae_noname0.0570.01420.0276
speciesPropionibacterium_freudenreichii0.0570.01450.028
speciesEubacterium_biforme0.0560.01470.0283
phylumEuryarchaeota0.0560.01520.0292
speciesProteus_mirabilis0.0560.01550.0296
speciesBacteroides_plebeius0.0560.01610.0306
genusTunalikevirus0.0550.01780.0337
genusMorganella0.0540.01860.035
speciesMorganella_morganii0.0540.01860.035
genusCoriobacteriaceae_noname-0.0540.01890.0354
genusMethanosphaera0.0540.01920.0357
speciesMethanosphaera_stadtmanae0.0540.01920.0357
speciesParabacteroides_johnsonii-0.0540.01930.0357
speciesMegasphaera_elsdenii0.0540.01940.0358
speciesFusobacterium_mortiferum0.0540.01950.0358
speciesCoriobacteriaceae_bacterium_phI-0.0540.02030.0371
speciesEubacterium_sp_3_1_31-0.0530.02180.0397
speciesButyrivibrio_crossotus0.0530.02210.0401
orderCaudovirales0.0530.02310.0418
genusPorphyromonas0.0510.02620.0472
speciesClostridiales_bacterium_1_7_47FAA-0.0510.02690.0483
speciesErysipelotrichaceae_bacterium_5_2_54FAA-0.050.02980.0533
orderPseudomonadales0.050.03150.0561
speciesKlebsiella_phage_KP360.0480.03630.0644
speciesSutterella_wadsworthensis-0.0480.0370.0654
genusAnaerostipes0.0480.03870.0682
genusLambdalikevirus0.0470.04110.0721
genusRoseburia-0.0470.0430.0752
speciesBifidobacterium_adolescentis0.0460.04740.0826
speciesAnaerostipes_hadrus0.0460.04890.0849
familySiphoviridae0.0450.04950.0856
speciesLachnospiraceae_bacterium_1_4_56FAA-0.0450.050.0861
genusCoprococcus0.0450.05080.087
speciesLachnospiraceae_bacterium_1_1_57FAA0.0450.05090.087
speciesButyrivibrio_unclassified-0.0450.05160.0878
speciesBacteroides_sp_2_1_22-0.0450.05170.0878
speciesBacteroides_coprocola0.0450.0520.088
genusSlackia0.0450.05260.0885
speciesCollinsella_unclassified-0.0450.05270.0885
speciesRuminococcus_champanellensis0.0450.05330.0892
speciesBacteroides_nordii-0.0450.05420.0904
speciesRuminococcus_sp_5_1_39BFAA0.0440.05440.0904
speciesLachnospiraceae_bacterium_5_1_63FAA0.0440.05530.0916
speciesBifidobacterium_animalis0.0430.06160.102
speciesLactobacillus_sanfranciscensis0.0430.06360.105
genusSubdoligranulum-0.0420.07140.117
speciesBifidobacterium_breve0.0420.07180.117
speciesSubdoligranulum_unclassified-0.0410.0770.125
orderAeromonadales0.0410.07730.125
speciesCoprococcus_sp_ART55_10.0410.07760.125
genusSutterella-0.0410.07970.128
speciesRoseburia_inulinivorans-0.040.0820.132
speciesBacteroides_coprophilus0.040.0830.133
speciesClostridium_clostridioforme-0.040.08350.133
genusBurkholderiales_noname-0.040.08390.133
speciesBurkholderiales_bacterium_1_1_47-0.040.08390.133
familyBurkholderiales_noname-0.040.08530.135
speciesEubacterium_dolichum-0.040.08640.135
speciesRuminococcus_callidus0.040.08640.135
genusAcidaminococcus-0.0390.09090.142
speciesSutterella_parvirubra0.0390.09340.145
speciesEubacterium_cylindroides0.0390.09590.149
speciesRoseburia_hominis-0.0380.10.155
speciesClostridium_symbiosum-0.0370.1050.162
speciesMegamonas_funiformis-0.0370.1080.166
speciesAlistipes_unclassified-0.0370.1090.167
genusBarnesiella-0.0370.110.167
speciesBarnesiella_intestinihominis-0.0370.110.167
speciesAcidaminococcus_unclassified-0.0370.1120.17
speciesMethanobrevibacter_unclassified0.0370.1130.171
speciesDorea_unclassified-0.0370.1150.173
speciesBacteroides_sp_1_1_6-0.0360.1160.174
speciesOscillibacter_sp_KLE_1728-0.0360.1160.174
genusAcidaminococcaceae_unclassified-0.0360.1210.181
speciesRuminococcus_gnavus0.0350.1260.188
speciesBacteroides_sp_3_1_19-0.0350.130.193
familyStaphylococcaceae0.0350.1330.196
speciesLactobacillus_acidophilus0.0350.1330.196
speciesLactobacillus_amylovorus0.0340.1430.21
speciesPrevotella_stercorea0.0340.1430.21
speciesPorphyromonas_uenonis0.0330.1480.216
speciesBacteroides_massiliensis-0.0330.1510.22
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0330.1550.225
orderViruses_noname0.0330.1580.228
speciesLactobacillus_ruminis0.0330.1580.228
speciesErysipelotrichaceae_bacterium_21_30.0320.160.23
genusFaecalibacterium0.0320.1680.24
speciesFaecalibacterium_prausnitzii0.0320.1680.24
speciesRuminococcus_torques0.0320.1730.247
phylumSynergistetes0.0310.1760.248
classSynergistia0.0310.1760.248
orderSynergistales0.0310.1760.248
familySynergistaceae0.0310.1760.248
familyRuminococcaceae0.0310.1770.249
speciesPrevotella_bivia-0.030.1920.269
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0290.2080.29
genusStaphylococcus0.0290.2090.29
speciesClostridium_sp_KLE_1755-0.0290.2090.29
familyPrevotellaceae0.0290.2130.295
speciesBlautia_hydrogenotrophica-0.0280.2220.306
genusPhascolarctobacterium0.0280.2290.314
speciesPhascolarctobacterium_succinatutens0.0280.2290.314
genusParasutterella-0.0280.230.314
speciesParasutterella_excrementihominis-0.0280.230.314
speciesEnterobacteria_phage_HK5440.0270.2370.322
speciesParabacteroides_sp_20_30.0270.2410.327
genusCatenibacterium0.0270.2450.33
speciesCatenibacterium_mitsuokai0.0270.2450.33
speciesParaprevotella_xylaniphila-0.0270.2460.331
speciesMegamonas_rupellensis-0.0270.2510.337
speciesHoldemania_unclassified-0.0260.2590.346
genusClostridium0.0250.2790.372
speciesAlistipes_senegalensis-0.0250.2890.384
speciesStreptococcus_phage_Sfi210.0240.2920.387
speciesPorphyromonas_asaccharolytica0.0240.2950.39
speciesEggerthella_lenta0.0240.2990.394
speciesDesulfovibrio_piger-0.0240.30.394
familyClostridiaceae0.0240.3010.395
speciesClostridium_spiroforme0.0240.3030.396
speciesParabacteroides_goldsteinii-0.0240.3050.398
genusMyoviridae_noname0.0240.3070.398
speciesMitsuokella_unclassified0.0240.3070.398
speciesCollinsella_intestinalis-0.0240.3080.398
speciesDialister_succinatiphilus0.0230.3110.401
speciesBifidobacterium_angulatum0.0230.3160.406
genusRuminococcus0.0230.320.41
familyViruses_noname0.0220.3330.425
genusViruses_noname0.0220.3330.425
speciesRoseburia_unclassified0.0220.3410.434
genusMitsuokella0.0220.3420.434
speciesCoprobacillus_sp_D60.0220.3460.438
speciesBacteroides_fluxus0.0210.3560.449
speciesBifidobacterium_bifidum0.0210.3610.454
speciesBacteroides_finegoldii0.0210.3620.454
speciesOdoribacter_laneus-0.0210.3720.466
speciesEubacterium_limosum-0.0210.3740.467
speciesBacteroides_eggerthii0.020.3920.488
speciesPeptostreptococcus_anaerobius-0.0190.4060.504
speciesLachnospiraceae_bacterium_5_1_57FAA-0.0190.4130.512
speciesMegamonas_unclassified0.0190.4140.512
genusButyricimonas-0.0190.4190.515
speciesButyricimonas_synergistica-0.0190.4190.515
genusMegamonas0.0190.4220.517
speciesCollinsella_tanakaei-0.0190.4230.517
speciesHoldemania_sp_AP2-0.0180.4240.517
speciesCoprococcus_comes0.0180.4250.517
speciesEubacterium_rectale-0.0180.4330.525
speciesMegamonas_hypermegale-0.0170.4530.548
speciesBacteroides_fragilis-0.0170.4620.557
speciesClostridium_sp_L2_500.0170.4630.557
speciesOdoribacter_unclassified-0.0170.4710.566
speciesErysipelotrichaceae_bacterium_3_1_53-0.0160.4850.58
speciesLactococcus_phage_jm20.0160.4850.58
genusGordonibacter0.0160.4950.587
speciesGordonibacter_pamelaeae0.0160.4950.587
phylumVerrucomicrobia-0.0160.5010.587
classVerrucomicrobiae-0.0160.5010.587
orderVerrucomicrobiales-0.0160.5010.587
familyVerrucomicrobiaceae-0.0160.5010.587
genusAkkermansia-0.0160.5010.587
speciesAkkermansia_muciniphila-0.0160.5010.587
genusPyramidobacter0.0150.5090.593
speciesPyramidobacter_piscolens0.0150.5090.593
speciesAcidaminococcus_fermentans-0.0150.5140.598
genusButyricicoccus-0.0150.5180.599
speciesButyricicoccus_pullicaecorum-0.0150.5180.599
speciesBacteroides_salanitronis0.0150.5210.601
speciesParaprevotella_clara-0.0140.5350.616
genusDialister0.0130.5640.648
speciesMitsuokella_multacida0.0130.570.653
speciesMegasphaera_unclassified0.0120.5910.675
speciesFusobacterium_ulcerans0.0120.5990.683
speciesCoprobacillus_sp_29_10.0120.6090.691
speciesDialister_invisus0.0120.6090.691
speciesParabacteroides_sp_D130.0120.6120.693
speciesBacteroides_salyersiae-0.0120.6140.693
speciesEubacterium_hallii0.0110.6280.707
genusSutterellaceae_unclassified0.0110.6320.71
speciesBacteroides_faecis-0.0110.6390.716
genusEubacterium-0.0110.6420.718
genusSuccinatimonas0.0110.6460.719
speciesSuccinatimonas_hippei0.0110.6460.719
familyEubacteriaceae-0.0110.6480.72
speciesEubacterium_eligens-0.010.6540.725
speciesClostridium_sp_ATCC_BAA_4420.010.6560.725
speciesLachnospiraceae_bacterium_2_1_58FAA-0.010.6690.737
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.010.670.737
genusOxalobacter-0.010.6790.744
speciesOxalobacter_formigenes-0.010.6790.744
speciesRuminococcus_lactaris0.0090.6810.744
speciesRoseburia_intestinalis0.0090.6870.749
familyOxalobacteraceae-0.0090.6930.754
speciesEubacterium_ramulus0.0090.6950.754
speciesLactococcus_phage_phi70.0090.6980.756
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0090.7120.769
speciesBifidobacterium_pseudocatenulatum-0.0080.7150.77
speciesClostridium_hathewayi-0.0080.7160.77
speciesSlackia_piriformis0.0080.7320.785
genusParaprevotella-0.0080.7370.789
speciesAlistipes_sp_HGB5-0.0070.7510.802
genusPeptoniphilus0.0070.7540.803
speciesFusobacterium_varium0.0070.7580.806
speciesBacteroides_barnesiae0.0070.7620.808
familySuccinivibrionaceae0.0070.7650.81
speciesParaprevotella_unclassified-0.0070.7670.81
speciesLactococcus_phage_P680-0.0060.80.843
familyAcidaminococcaceae-0.0050.8220.864
speciesStreptococcus_pasteurianus-0.0050.8240.864
speciesBacteroides_oleiciplenus-0.0050.8380.877
speciesEggerthella_unclassified-0.0040.8490.887
speciesAnaerostipes_unclassified-0.0040.8640.9
speciesEubacterium_siraeum-0.0030.8820.917
genusClostridiales_noname-0.0030.8880.92
speciesC2likevirus_unclassified0.0030.8890.92
familyPodoviridae-0.0030.8940.923
speciesLachnospiraceae_bacterium_6_1_63FAA0.0030.90.928
genusButyrivibrio-0.0020.9150.941
speciesAcidaminococcus_intestini0.0020.9190.943
speciesBacteroides_intestinalis-0.0020.9210.943
genusC2likevirus0.0020.9250.944
speciesLachnospiraceae_bacterium_2_1_46FAA0.0020.9260.944
speciesRuminococcus_bromii0.0020.9280.944
genusEggerthella0.0020.9430.951
speciesLachnospiraceae_bacterium_3_1_46FAA0.0020.9430.951
speciesBlautia_producta-0.0020.9460.951
speciesLactococcus_phage_bIL670.0020.9460.951
genusAdlercreutzia-0.0020.9470.951
speciesAdlercreutzia_equolifaciens-0.0020.9470.951
speciesBacteroides_sp_4_3_47FAA0.0010.9820.984
speciesLactococcus_phage_936_sensu_lato0.00.9860.986
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Liver cirrhosisChina1201140.00170511095680.0002101774921528.33557190519e-129243.1039
Ulcerative colitisSpain78660.0002836499911960.0001640724601060.046686753694459415.1547
ObesityDenmark1691230.0002331670039270.0004958576215310.2526009797341291742.4748
Rheumatoid arthritisChina127980.0008886206714380.0005363640915220.3479139908161334644.506
Type II diabetesSweden53920.002678628289010.0006230189683060.3679847243841217441.2259
Colorectal cancerAustria64350.001253944089730.0008323908354270.5084360662171847962.522
Type II diabetesDenmark752770.0002201971200090.0003403097392240.6857149785962455180.4766
Crohns diseaseSpain17660.0005616182891070.0001640724601060.8777419876392868395.3716
Type II diabetesChina1831850.0005609769871390.0004403209290090.9885038396323007699.3952
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382