MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-02-09 03:19:46 PST
Job id & description: 2412, test
Query type: protein
Count queries & homologs: 1, 68
Min % identity & max e-value: 40%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
as634110CompleteK00244COG1053FirmicutesGranulicatella99.7877.0560.44
as632023CompleteK00244COG1053unknownunknown98.4475.8662.75
as596136CompleteK00244COG1053unknownunknown96.4472.5359.22
as623124CompleteK00244COG1053Proteobacteriaunknown99.7876.6660.89
as599814Lack 5'-endK00244COG1053Proteobacteriaunknown99.7875.6360.67
as648519CompleteK00244COG1053unknownunknown100.077.7257.56
as630119CompleteK00244COG1053unknownunknown100.076.9259.56
as616523CompleteK00244COG1053unknownunknown100.076.459.11
as629035CompleteK00244COG1053unknownunknown98.4475.7359.82
as624080CompleteK00244COG1053unknownunknown99.1175.9859.19
as629018CompleteK00244COG1053unknownunknown99.3376.4158.84
as628043CompleteK00244COG1053unknownunknown98.4475.7358.92
as506265CompleteK00244COG1053unknownunknown100.070.9858.0
as629449CompleteK00244COG1053unknownunknown98.4475.7359.37
as634598CompleteK00244COG1053unknownunknown96.4474.158.66
as630235CompleteK00244COG1053unknownunknown98.4475.7358.92
as621130CompleteK00244COG1053unknownunknown95.172.7957.24
as622807CompleteK00244COG1053unknownunknown95.172.9157.71
as642001CompleteK00244COG1053unknownunknown100.077.2857.24
as577944CompleteK00244COG1053unknownunknown98.4473.4757.79
as621802CompleteK00244COG1053ProteobacteriaSutterella98.4475.3458.47
as636097CompleteK00244COG1053ProteobacteriaSutterella98.4475.9958.47
as552681CompleteK00244COG1053ProteobacteriaSutterella98.4472.2758.47
as615780CompleteK00244COG1053unknownunknown98.4475.0858.69
as620451CompleteK00244COG1053ProteobacteriaSutterella98.4475.3458.24
as636095CompleteK00244COG1053unknownunknown98.4475.9958.24
as599960CompleteK00244COG1053unknownunknown96.4472.9457.14
as561372CompleteK00244COG1053unknownunknown95.170.1657.24
as620616CompleteK00244COG1053unknownunknown98.4475.3457.34
as1631472Lack both endsK00244COG1053unknownunknown88.298.7658.69
as967705CompleteK00244COG1053FirmicutesHoldemania99.7890.6950.11
as998285CompleteK00244COG1053FirmicutesSolobacterium100.091.850.44
as777321Lack 3'-endK00244COG1053unknownunknown89.5374.6356.08
as629854CompleteK00244COG1053FusobacteriaFusobacterium99.1176.2448.66
as613402CompleteK00244COG1053FirmicutesSolobacterium96.6673.4348.16
as1937575Lack both endsK00244COG1053Proteobacteriaunknown82.1899.7356.22
as2001526Lack 5'-endK00244COG1053unknownunknown81.07100.056.04
as624462CompleteK00244COG1053unknownunknown99.1175.9849.55
as1836198Lack 5'-endK00244COG1053unknownunknown81.5196.5855.31
as623863CompleteK00244COG1053FusobacteriaFusobacterium100.076.6649.34
as624026CompleteK00244COG1053Fusobacteriaunknown94.2172.0649.41
as624514CompleteK00244COG1053FusobacteriaFusobacterium95.172.7448.48
as1410324CompleteK00244COG1053unknownunknown80.6284.5453.87
as1141377Lack 3'-endK00244COG1053unknownunknown73.7271.5557.83
as595770Lack both endsK00244COG1053Actinobacteriaunknown99.5575.0842.13
as577850CompleteK00244COG1053ActinobacteriaEggerthella96.4472.0241.88
as2426846CompleteK00244COG1053unknownunknown72.3899.3951.84
as626634CompleteK00244COG1053unknownunknown99.7876.7942.79
as649406CompleteK00244COG1053Firmicutesunknown97.174.4443.15
as648486CompleteK00244COG1053Firmicutesunknown97.174.4442.79
as648599CompleteK00244COG1053Firmicutesunknown96.6674.0942.89
as613381CompleteK00244COG1053FirmicutesHoldemania95.172.5941.9
as631008CompleteK00244COG1053FirmicutesHoldemania94.6572.8243.95
as574515CompleteK00244COG1053ActinobacteriaEggerthella95.170.7440.14
as1063467CompleteK00244COG1053unknownunknown99.7891.8142.92
as914637CompleteK00244COG1053FirmicutesGranulicatella99.7886.5340.04
as1123224CompleteK00244COG1053unknownunknown94.8889.0640.0
as526374CompleteK00244COG1053unknownunknown99.7870.5640.22
as679668CompleteK00244COG1053FusobacteriaFusobacterium95.172.9340.37
as679666CompleteK00244COG1053FusobacteriaFusobacterium95.172.9340.37
as959271CompleteK00244COG1053Proteobacteriaunknown93.9985.0540.42
as961683CompleteK00244COG1053Proteobacteriaunknown94.2185.2540.32
as1101087CompleteK00244COG1053unknownunknown99.5593.640.0
as1017586CompleteK00244COG1053ProteobacteriaSutterella94.8885.3340.23
as1097940CompleteK00244COG1053unknownunknown99.7893.1940.22
as2262601CompleteK00244COG1053unknownunknown74.6196.1841.59
as2158810Lack 5'-endK00244COG1053Proteobacteriaunknown72.8396.5640.12
as2164586Lack 5'-endK00244COG1053FirmicutesFaecalibacterium75.2895.9940.29
Click on arrows to sort table data. Shift+click to sort by multiple columns.

The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
orderBurkholderiales0.5872.99e-1731.41e-170
classBetaproteobacteria0.5842.01e-1714.74e-169
familySutterellaceae0.5381.51e-1402.38e-138
familyBacteroidaceae0.3957.11e-716.71e-69
genusBacteroides0.3957.11e-716.71e-69
classBacteroidia0.3543.23e-561.92e-54
orderBacteroidales0.3543.23e-561.92e-54
phylumBacteroidetes0.3543.25e-561.92e-54
phylumProteobacteria0.3121.62e-438.5e-42
phylumFirmicutes-0.3099.16e-434.32e-41
genusCoprococcus-0.3011.73e-407.42e-39
genusFlavonifractor0.2997.08e-402.57e-38
speciesFlavonifractor_plautii0.2997.08e-402.57e-38
speciesMethanobrevibacter_smithii-0.2981.06e-393.57e-38
classMethanobacteria-0.2964.14e-391.15e-37
orderMethanobacteriales-0.2964.14e-391.15e-37
familyMethanobacteriaceae-0.2964.14e-391.15e-37
speciesCoprococcus_catus-0.2964.39e-391.15e-37
genusParabacteroides0.2932.11e-385.24e-37
genusMethanobrevibacter-0.2932.26e-385.33e-37
phylumEuryarchaeota-0.291.45e-373.26e-36
familyRuminococcaceae-0.2853.59e-367.7e-35
classClostridia-0.2798.67e-351.71e-33
orderClostridiales-0.2798.68e-351.71e-33
speciesRuminococcus_obeum-0.2781.53e-342.89e-33
speciesRuminococcus_gnavus0.2751.01e-331.83e-32
phylumFusobacteria0.2683.3e-325.37e-31
classFusobacteriia0.2683.3e-325.37e-31
orderFusobacteriales0.2683.3e-325.37e-31
speciesSubdoligranulum_unclassified-0.2643.5e-315.51e-30
genusFusobacterium0.2629.69e-311.48e-29
genusSubdoligranulum-0.262.21e-303.26e-29
familyFusobacteriaceae0.262.6e-303.72e-29
speciesClostridium_bolteae0.2594.9e-306.8e-29
speciesCollinsella_aerofaciens-0.2554.36e-295.88e-28
speciesDorea_longicatena-0.254.71e-286.18e-27
speciesEubacterium_siraeum-0.2431.26e-261.61e-25
genusDorea-0.2415.15e-266.4e-25
familyClostridiales_noname0.2364.17e-255.05e-24
speciesBacteroides_fragilis0.2332.1e-242.48e-23
familyPorphyromonadaceae0.2314.3e-244.95e-23
genusCollinsella-0.2315.23e-245.88e-23
genusBurkholderiales_noname0.2255.8e-236.22e-22
speciesBurkholderiales_bacterium_1_1_470.2255.8e-236.22e-22
familyBurkholderiales_noname0.2256.53e-236.85e-22
speciesBilophila_unclassified0.2258.19e-238.4e-22
genusBilophila0.2222.26e-222.27e-21
speciesBacteroides_thetaiotaomicron0.2223.23e-223.18e-21
genusSutterella0.2181.69e-211.63e-20
speciesBacteroides_ovatus0.2171.94e-211.83e-20
speciesCoprococcus_comes-0.2154.76e-214.41e-20
speciesEubacterium_hallii-0.2081.06e-199.62e-19
genusRuminococcus-0.2071.81e-191.61e-18
genusParasutterella0.2062.49e-192.14e-18
speciesParasutterella_excrementihominis0.2062.49e-192.14e-18
speciesEubacterium_biforme-0.2053.78e-193.19e-18
speciesSutterella_wadsworthensis0.2053.9e-193.23e-18
speciesBifidobacterium_adolescentis-0.2044.68e-193.81e-18
speciesFusobacterium_mortiferum0.2021.01e-188.08e-18
speciesBacteroides_vulgatus0.1993.11e-182.45e-17
speciesClostridiales_bacterium_1_7_47FAA0.1994.38e-183.39e-17
speciesClostridium_citroniae0.1977.65e-185.82e-17
orderCoriobacteriales-0.1978.47e-186.25e-17
familyCoriobacteriaceae-0.1978.47e-186.25e-17
phylumActinobacteria-0.1978.93e-186.39e-17
classActinobacteria-0.1978.93e-186.39e-17
speciesFusobacterium_varium0.1942.83e-171.99e-16
speciesOlsenella_unclassified-0.1925.92e-174.11e-16
speciesBacteroides_stercoris0.1891.74e-161.19e-15
speciesCoprococcus_sp_ART55_1-0.1865.46e-163.68e-15
speciesClostridium_leptum-0.1849.47e-166.3e-15
genusOlsenella-0.1831.81e-151.19e-14
speciesFusobacterium_ulcerans0.1813.33e-152.15e-14
speciesClostridium_symbiosum0.1813.41e-152.18e-14
classDeltaproteobacteria0.1813.59e-152.2e-14
orderDesulfovibrionales0.1813.59e-152.2e-14
familyDesulfovibrionaceae0.1813.59e-152.2e-14
phylumVerrucomicrobia-0.184.45e-152.53e-14
classVerrucomicrobiae-0.184.45e-152.53e-14
orderVerrucomicrobiales-0.184.45e-152.53e-14
familyVerrucomicrobiaceae-0.184.45e-152.53e-14
genusAkkermansia-0.184.45e-152.53e-14
speciesAkkermansia_muciniphila-0.184.45e-152.53e-14
speciesDorea_formicigenerans-0.1795.62e-153.16e-14
speciesParabacteroides_distasonis0.1771.12e-146.22e-14
orderBifidobacteriales-0.1771.34e-147.27e-14
familyBifidobacteriaceae-0.1771.34e-147.27e-14
genusBifidobacterium-0.1761.97e-141.06e-13
speciesLachnospiraceae_bacterium_9_1_43BFAA0.1752.33e-141.24e-13
familyEubacteriaceae-0.1743.53e-141.85e-13
genusEubacterium-0.1743.56e-141.85e-13
speciesLachnospiraceae_bacterium_1_4_56FAA0.1726.34e-143.25e-13
familyLachnospiraceae-0.1727.34e-143.73e-13
speciesClostridium_nexile0.1711.04e-135.22e-13
speciesCoprococcus_eutactus-0.1691.75e-138.69e-13
speciesClostridium_clostridioforme0.1691.86e-139.14e-13
speciesEubacterium_dolichum0.1673.59e-131.75e-12
speciesBacteroides_xylanisolvens0.1673.65e-131.76e-12
speciesMethanobrevibacter_unclassified-0.1674.11e-131.96e-12
speciesBilophila_wadsworthia0.1655.99e-132.83e-12
genusErysipelotrichaceae_noname-0.1631.16e-125.42e-12
speciesCoprobacillus_unclassified0.1631.19e-125.51e-12
speciesAnaerotruncus_unclassified-0.1631.42e-126.51e-12
speciesAnaerostipes_unclassified0.1571.01e-114.58e-11
speciesClostridium_sp_L2_50-0.1542.11e-119.48e-11
genusAdlercreutzia-0.1532.52e-111.11e-10
speciesAdlercreutzia_equolifaciens-0.1532.52e-111.11e-10
speciesEubacterium_ramulus-0.1523.94e-111.72e-10
speciesRuminococcus_bromii-0.1514.65e-112.01e-10
genusClostridiales_noname0.156.88e-112.95e-10
speciesLachnospiraceae_bacterium_6_1_63FAA0.157.23e-113.07e-10
speciesRuminococcus_sp_5_1_39BFAA-0.1498.57e-113.61e-10
classErysipelotrichia-0.1481.3e-105.34e-10
orderErysipelotrichales-0.1481.3e-105.34e-10
familyErysipelotrichaceae-0.1481.3e-105.34e-10
speciesClostridium_hathewayi0.1462.15e-108.75e-10
speciesLachnospiraceae_bacterium_2_1_58FAA0.1453.15e-101.27e-09
speciesEubacterium_rectale-0.1444.37e-101.75e-09
speciesParabacteroides_unclassified0.1434.8e-101.9e-09
speciesAnaerostipes_hadrus-0.1435.62e-102.21e-09
familyOscillospiraceae0.1426.71e-102.6e-09
genusOscillibacter0.1426.71e-102.6e-09
genusMethanosphaera-0.1411.02e-093.88e-09
speciesMethanosphaera_stadtmanae-0.1411.02e-093.88e-09
speciesRuminococcus_callidus-0.1391.48e-095.59e-09
speciesAlistipes_senegalensis-0.1391.68e-096.29e-09
genusCoprobacillus0.1382.25e-098.36e-09
speciesRoseburia_hominis-0.1363.32e-091.22e-08
speciesBifidobacterium_longum-0.1336.85e-092.51e-08
speciesStreptococcus_thermophilus-0.1337.68e-092.79e-08
genusActinomyces-0.131.65e-085.95e-08
familyActinomycetaceae-0.131.75e-086.26e-08
genusClostridiaceae_noname0.131.91e-086.73e-08
speciesClostridiaceae_bacterium_JC1180.131.91e-086.73e-08
speciesLachnospiraceae_bacterium_2_1_46FAA0.1282.46e-088.6e-08
speciesBlautia_producta0.1273.81e-081.32e-07
genusSutterellaceae_unclassified0.1265.05e-081.74e-07
speciesClostridium_ramosum0.1246.73e-082.3e-07
orderLactobacillales-0.1231.06e-073.6e-07
genusButyrivibrio-0.1211.43e-074.82e-07
speciesOscillibacter_unclassified0.1211.61e-075.39e-07
genusMitsuokella-0.1211.72e-075.72e-07
speciesAnaerotruncus_colihominis0.121.79e-075.91e-07
classBacilli-0.1192.22e-077.28e-07
speciesRuminococcus_lactaris-0.1192.45e-077.98e-07
genusCatenibacterium-0.1192.64e-078.48e-07
speciesCatenibacterium_mitsuokai-0.1192.64e-078.48e-07
familyLactobacillaceae-0.1182.86e-079.12e-07
speciesLactobacillus_casei_paracasei-0.1183.17e-071e-06
speciesEggerthella_unclassified0.1173.76e-071.18e-06
speciesBacteroides_uniformis0.1164.69e-071.47e-06
speciesBifidobacterium_animalis-0.1164.88e-071.51e-06
genusLactobacillus-0.1164.89e-071.51e-06
speciesMitsuokella_unclassified-0.1155.94e-071.82e-06
genusPeptostreptococcaceae_noname-0.1156.66e-072.03e-06
speciesRuminococcus_champanellensis-0.1147.66e-072.32e-06
speciesKlebsiella_pneumoniae0.1147.99e-072.4e-06
speciesMegasphaera_micronuciformis0.1148.49e-072.54e-06
speciesHaemophilus_parainfluenzae0.1138.89e-072.64e-06
orderPasteurellales0.1139.17e-072.69e-06
familyPasteurellaceae0.1139.17e-072.69e-06
speciesEubacterium_cylindroides-0.1139.44e-072.75e-06
speciesMitsuokella_multacida-0.1139.57e-072.77e-06
genusHaemophilus0.1139.66e-072.78e-06
speciesLachnospiraceae_bacterium_3_1_57FAA_CT1-0.1131.01e-062.89e-06
speciesButyrivibrio_crossotus-0.1121.21e-063.44e-06
genusLeuconostoc-0.1121.25e-063.53e-06
genusEggerthella0.1111.47e-064.13e-06
familyEnterococcaceae-0.1111.66e-064.64e-06
speciesClostridium_asparagiforme0.111.81e-065.03e-06
speciesClostridium_sp_ATCC_BAA_4420.1083.03e-068.36e-06
genusEnterococcus-0.1073.55e-069.74e-06
genusTuricibacter-0.1064.07e-061.11e-05
familyPeptostreptococcaceae-0.1046.04e-061.64e-05
speciesLachnospiraceae_bacterium_5_1_57FAA0.1046.19e-061.67e-05
speciesTuricibacter_sanguinis-0.1046.84e-061.83e-05
familySiphoviridae-0.1038.89e-062.37e-05
speciesVeillonella_dispar0.1011.22e-053.24e-05
phylumViruses_noname-0.1011.26e-053.3e-05
classViruses_noname-0.1011.26e-053.3e-05
speciesLactococcus_phage_P680-0.11.6e-054.17e-05
speciesBacteroides_massiliensis0.0991.71e-054.43e-05
speciesFusobacterium_nucleatum0.0991.82e-054.69e-05
speciesPeptostreptococcaceae_noname_unclassified-0.0991.98e-055.08e-05
familyClostridiaceae0.0982.28e-055.82e-05
speciesAggregatibacter_segnis0.0982.37e-056.01e-05
genusKlebsiella0.0972.44e-056.16e-05
genusClostridium0.0972.61e-056.55e-05
speciesStreptococcus_pasteurianus0.0962.96e-057.39e-05
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0963.29e-058.17e-05
genusAggregatibacter0.0944.51e-050.000111
orderActinomycetales-0.0935.33e-050.000131
speciesBacteroides_dorei0.0926.38e-050.000156
speciesVeillonella_atypica0.0926.51e-050.000158
speciesOdoribacter_splanchnicus0.0927.28e-050.000176
speciesBifidobacterium_pseudocatenulatum0.0917.9e-050.00019
speciesEnterococcus_faecium-0.0918.23e-050.000197
speciesLactobacillus_rhamnosus-0.099.15e-050.000218
speciesEubacterium_ventriosum-0.090.0001050.000249
speciesDialister_succinatiphilus-0.0870.0001580.000373
speciesMegamonas_unclassified0.0870.0001650.000387
genusMegamonas0.0870.0001690.000395
genusVeillonella0.0870.0001790.000416
orderCaudovirales-0.0860.0001810.000419
speciesTuricibacter_unclassified-0.0850.0002260.00052
genusAnaerotruncus-0.0840.0002580.000591
genusOxalobacter-0.0840.0002720.000617
speciesOxalobacter_formigenes-0.0840.0002720.000617
genusDialister-0.0840.000280.000632
familyOxalobacteraceae-0.0840.0002870.000645
speciesRuminococcus_sp_JC304-0.0830.0003260.000729
familyStreptococcaceae-0.0830.0003290.000732
speciesDesulfovibrio_piger-0.0830.0003520.00078
speciesLactococcus_lactis-0.0820.0003560.000785
speciesOscillibacter_sp_KLE_17450.0820.0003590.000788
speciesParabacteroides_merdae0.0810.0004280.000935
genusFaecalibacterium-0.0810.0004560.000987
speciesFaecalibacterium_prausnitzii-0.0810.0004560.000987
speciesBacteroides_oleiciplenus0.0810.0004810.00104
genusSiphoviridae_noname-0.080.0005170.0011
speciesBacteroides_salyersiae0.080.0005170.0011
genusMegasphaera0.080.0005520.00117
speciesClostridium_bartlettii-0.080.0005540.00117
genusAnaerostipes-0.0790.000620.00131
genusC2likevirus-0.0790.0006270.00131
genusLactococcus-0.0790.0006290.00131
speciesBifidobacterium_catenulatum-0.0770.0008250.00172
speciesPropionibacterium_freudenreichii-0.0770.0008610.00178
genusOdoribacter0.0770.0009070.00186
speciesBacteroides_nordii0.0770.0009110.00186
speciesVeillonella_unclassified0.0770.0009120.00186
speciesOdoribacter_laneus-0.0760.0009370.00191
genusGordonibacter-0.0760.001050.00212
speciesGordonibacter_pamelaeae-0.0760.001050.00212
speciesBifidobacterium_dentium-0.0760.001080.00216
speciesC2likevirus_unclassified-0.0760.001080.00216
genusStreptococcus-0.0750.00110.00219
speciesMegamonas_rupellensis0.0750.001120.00221
speciesBacteroides_clarus0.0750.001120.00221
speciesEubacterium_sp_3_1_310.0750.001220.0024
speciesCollinsella_intestinalis0.0730.001550.00304
speciesLactobacillus_plantarum-0.0730.001620.00315
speciesBacteroides_faecis0.0730.001620.00315
speciesLactobacillus_gasseri-0.0710.002050.00397
speciesVeillonella_parvula0.0710.002140.00412
speciesStreptococcus_sanguinis-0.0710.002240.0043
speciesBacteroides_caccae0.070.002340.00447
speciesErysipelotrichaceae_bacterium_21_3-0.070.002390.00455
speciesStreptococcus_mutans-0.070.002480.00468
speciesDorea_unclassified0.070.002480.00468
familyLeuconostocaceae-0.0690.002660.005
speciesStreptococcus_parasanguinis-0.0690.002760.00517
speciesRuminococcus_torques-0.0690.003030.00565
speciesBacteroides_pectinophilus-0.0680.003140.00583
genusPhascolarctobacterium-0.0680.003380.00621
speciesCampylobacter_concisus0.0680.003380.00621
speciesPhascolarctobacterium_succinatutens-0.0680.003380.00621
genusPyramidobacter0.0670.003910.00713
speciesPyramidobacter_piscolens0.0670.003910.00713
genusHoldemania0.0670.003940.00715
speciesStreptococcus_salivarius-0.0660.004150.0075
speciesLachnospiraceae_bacterium_8_1_57FAA-0.0660.004530.00816
speciesEnterococcus_faecalis-0.0650.004630.00831
genusPseudoflavonifractor-0.0640.005710.0102
speciesPseudoflavonifractor_capillosus-0.0640.005710.0102
speciesStreptococcus_gordonii-0.0640.005860.0104
speciesPrevotella_bivia0.0630.006140.0107
phylumSynergistetes0.0630.006170.0107
classSynergistia0.0630.006170.0107
orderSynergistales0.0630.006170.0107
familySynergistaceae0.0630.006170.0107
familyBacteroidales_noname-0.0630.006530.0112
genusBacteroidales_noname-0.0630.006530.0112
speciesBacteroidales_bacterium_ph8-0.0630.006530.0112
speciesSutterella_parvirubra0.0630.006720.0115
speciesAcidaminococcus_intestini0.0620.007640.0131
speciesParabacteroides_johnsonii0.0610.008250.0141
speciesBacteroides_finegoldii0.0610.008580.0146
speciesPrevotella_buccae0.060.00970.0164
speciesStreptococcus_vestibularis-0.0590.01130.019
speciesEubacterium_eligens-0.0580.01220.0205
speciesCollinsella_unclassified0.0570.01340.0224
genusAcidaminococcaceae_unclassified0.0560.01510.0252
speciesCollinsella_tanakaei0.0560.01550.0258
speciesLactococcus_phage_jm2-0.0560.01560.0258
speciesLactobacillus_ruminis-0.0550.01650.0272
speciesParaprevotella_clara-0.0550.01750.0288
speciesHaemophilus_paraphrohaemolyticus0.0550.0180.0295
speciesBacteroides_plebeius0.0550.01810.0296
speciesLactobacillus_salivarius0.0550.01820.0296
genusActinobacillus0.0540.01850.0299
speciesActinobacillus_unclassified0.0540.01850.0299
speciesHaemophilus_sputorum0.0540.01950.0314
speciesEnterobacter_cloacae0.0530.02190.0352
orderPseudomonadales-0.0530.02240.0358
speciesLachnospiraceae_bacterium_5_1_63FAA-0.0520.02460.0392
speciesBifidobacterium_bifidum-0.0520.02480.0394
genusRoseburia0.0520.02560.0405
genusBarnesiella-0.0510.02680.0422
speciesBarnesiella_intestinihominis-0.0510.02680.0422
speciesLactobacillus_sanfranciscensis-0.050.02960.0464
genusRothia-0.050.03050.0477
familyMicrococcaceae-0.050.0310.0481
speciesMegamonas_hypermegale0.050.0310.0481
genusBlautia-0.050.03150.0486
speciesOscillibacter_sp_KLE_17280.050.03150.0486
speciesErysipelotrichaceae_bacterium_3_1_530.0490.03280.0504
genusButyricimonas0.0490.03330.0509
speciesButyricimonas_synergistica0.0490.03330.0509
speciesBacteroides_salanitronis-0.0490.03390.0516
genusEnterobacter0.0490.0340.0516
speciesLactobacillus_vaginalis-0.0480.03780.0572
speciesParaprevotella_unclassified-0.0480.03870.0584
genusParaprevotella-0.0470.04030.0606
genusDesulfovibrio-0.0470.04050.0607
speciesLactobacillus_acidophilus-0.0470.04120.0615
speciesPrevotella_stercorea0.0460.04670.0695
speciesStreptococcus_anginosus-0.0450.05360.0793
speciesRoseburia_inulinivorans0.0450.05360.0793
speciesHoldemania_filiformis0.0440.05720.0841
speciesAlistipes_finegoldii-0.0440.05720.0841
speciesLactobacillus_fermentum-0.0430.0640.0938
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0410.0730.107
speciesMegamonas_funiformis0.0410.07440.108
speciesAlistipes_unclassified0.0410.07550.11
genusButyricicoccus0.0410.07710.111
speciesButyricicoccus_pullicaecorum0.0410.07710.111
speciesRothia_mucilaginosa-0.040.08120.117
speciesLachnospiraceae_bacterium_7_1_58FAA0.040.08210.118
speciesLactobacillus_delbrueckii-0.040.08270.118
genusPorphyromonas-0.040.08680.124
speciesProteus_mirabilis0.0390.08810.125
speciesDialister_invisus-0.0390.08980.127
speciesButyrivibrio_unclassified-0.0390.09510.134
classGammaproteobacteria0.0380.09890.139
familyStaphylococcaceae0.0380.1020.143
speciesLactococcus_phage_bIL67-0.0380.1020.143
speciesRoseburia_unclassified-0.0370.1050.147
speciesBacteroides_coprocola0.0370.110.153
genusCampylobacter0.0370.1120.155
genusPrevotella0.0370.1130.156
speciesLactobacillus_oris-0.0370.1140.157
genusStaphylococcus0.0350.1270.175
speciesLactobacillus_reuteri-0.0350.1290.177
speciesAlistipes_sp_HGB5-0.0350.130.177
speciesAlistipes_indistinctus-0.0350.130.177
familyCampylobacteraceae0.0350.1310.178
genusPeptostreptococcus0.0350.1330.18
speciesAcidaminococcus_fermentans-0.0350.1350.183
speciesBacteroides_cellulosilyticus0.0340.1460.197
orderAeromonadales0.0340.1470.198
speciesEscherichia_coli0.0330.1580.212
speciesClostridium_perfringens0.0320.160.214
speciesHoldemania_sp_AP20.0320.1670.223
familyRikenellaceae0.0320.1720.228
genusAlistipes0.0320.1720.228
genusEscherichia0.0310.1750.231
speciesMegasphaera_unclassified0.0310.1770.233
speciesBifidobacterium_angulatum-0.0310.180.237
speciesClostridium_spiroforme-0.0310.1810.237
genusPropionibacterium-0.0310.1820.238
speciesEnterobacteria_phage_HK5440.030.1950.254
speciesPorphyromonas_asaccharolytica-0.030.1950.254
speciesLactococcus_phage_phi7-0.030.20.259
speciesBacteroides_sp_3_1_190.0290.2040.264
speciesCoprobacillus_sp_D6-0.0290.2050.264
familyBacillales_noname-0.0290.210.269
genusGemella-0.0290.210.269
classEpsilonproteobacteria0.0290.2150.274
orderCampylobacterales0.0290.2150.274
speciesAlistipes_shahii-0.0280.2240.285
speciesParaprevotella_xylaniphila-0.0270.2410.306
speciesCoriobacteriaceae_bacterium_phI0.0270.2430.307
speciesParabacteroides_sp_D13-0.0260.2550.322
speciesStreptococcus_australis-0.0260.2560.322
orderViruses_noname-0.0260.2620.329
speciesMegasphaera_elsdenii-0.0260.2640.331
speciesLactobacillus_amylovorus-0.0260.2650.331
speciesKlebsiella_unclassified0.0250.2710.337
speciesCoprobacillus_sp_29_1-0.0250.2750.342
speciesBacteroides_sp_1_1_6-0.0250.2790.346
orderEnterobacteriales0.0250.2810.346
familyEnterobacteriaceae0.0250.2810.346
genusCoriobacteriaceae_noname0.0250.2850.35
speciesOdoribacter_unclassified-0.0240.3040.373
familyVeillonellaceae0.0230.3180.389
genusMorganella0.0230.3220.391
speciesMorganella_morganii0.0230.3220.391
speciesErysipelotrichaceae_bacterium_6_1_45-0.0230.3220.391
genusAcidaminococcus0.0230.3260.395
speciesDesulfovibrio_desulfuricans0.0230.330.398
speciesAlistipes_sp_AP110.0220.340.409
speciesBacteroides_sp_4_3_47FAA0.0220.3450.414
speciesLactobacillus_mucosae0.0220.3510.42
speciesPeptostreptococcus_stomatis0.0210.3530.422
speciesKlebsiella_oxytoca-0.0210.3710.441
speciesEggerthella_lenta0.0210.3710.441
speciesBifidobacterium_breve0.020.3850.457
speciesRoseburia_intestinalis0.0190.4010.474
genusSlackia-0.0190.4060.479
speciesErysipelotrichaceae_bacterium_2_2_44A0.0190.4120.485
speciesLeuconostoc_lactis-0.0190.4170.488
genusSuccinatimonas0.0190.4190.488
speciesSuccinatimonas_hippei0.0190.4190.488
speciesAcidaminococcus_unclassified0.0190.4190.488
speciesSlackia_piriformis-0.0190.420.488
speciesBacteroides_intestinalis0.0190.4220.489
speciesStreptococcus_infantarius0.0180.4290.496
orderBacillales-0.0180.4380.505
speciesSubdoligranulum_sp_4_3_54A2FAA-0.0170.4540.523
genusWeissella0.0160.480.551
familySuccinivibrionaceae0.0160.4820.552
genusPantoea-0.0160.4950.564
speciesPantoea_unclassified-0.0160.4950.564
genusLachnospiraceae_noname-0.0150.5120.582
speciesStreptococcus_phage_Sfi210.0150.5220.592
familyPropionibacteriaceae-0.0140.5420.613
speciesBlautia_hydrogenotrophica-0.0140.5460.617
speciesPorphyromonas_uenonis-0.0140.550.62
genusPeptoniphilus0.0130.570.641
speciesCitrobacter_freundii0.0130.5730.642
genusLambdalikevirus0.0130.5750.643
speciesBacteroides_sp_2_1_220.0130.5790.646
speciesEnterobacter_aerogenes0.0130.5870.653
speciesParabacteroides_sp_20_3-0.0120.5950.661
genusTunalikevirus-0.0120.6010.666
speciesPrevotella_copri0.0120.6170.682
speciesAlistipes_putredinis-0.0120.6180.682
speciesClostridium_sp_KLE_17550.0110.6380.702
speciesCitrobacter_unclassified0.010.6520.716
speciesBacteroides_fluxus-0.010.6550.717
speciesBacteroides_barnesiae-0.010.6650.727
genusCoprobacter-0.0090.7010.762
speciesCoprobacter_fastidiosus-0.0090.7010.762
speciesLactobacillus_crispatus0.0090.710.77
speciesGemella_morbillorum0.0080.7180.777
familyMyoviridae0.0080.7380.796
speciesKlebsiella_sp_MS_92_30.0080.7390.796
speciesEubacterium_limosum-0.0070.7470.803
speciesPeptostreptococcus_anaerobius0.0070.7590.814
speciesLachnospiraceae_bacterium_1_1_57FAA0.0070.7630.817
speciesParvimonas_unclassified0.0070.7660.818
genusParvimonas0.0070.7690.819
speciesStreptococcus_lutetiensis0.0070.7740.823
familyClostridiales_Family_XI_Incertae_Sedis0.0060.7920.84
genusRuminococcaceae_noname-0.0060.8010.846
speciesRuminococcaceae_bacterium_D16-0.0060.8010.846
classNegativicutes0.0060.8070.848
orderSelenomonadales0.0060.8070.848
genusCitrobacter0.0050.8210.861
familyPrevotellaceae0.0040.8470.886
familyViruses_noname0.0040.8540.89
genusViruses_noname0.0040.8540.89
speciesWeissella_confusa-0.0040.8790.914
speciesKlebsiella_phage_KP36-0.0030.8890.922
speciesWeissella_cibaria0.0030.8940.925
speciesAlistipes_onderdonkii0.0030.8980.926
speciesBacteroides_eggerthii-0.0030.8990.926
speciesHoldemania_unclassified-0.0030.910.936
familyAcidaminococcaceae-0.0030.9130.937
speciesStreptococcus_mitis_oralis_pneumoniae-0.0020.9160.938
genusMyoviridae_noname0.0020.9260.946
speciesEggerthella_sp_1_3_56FAA0.0020.9380.956
speciesLactococcus_garvieae0.0020.9450.958
genusSolobacterium-0.0020.9460.958
speciesSolobacterium_moorei-0.0020.9460.958
speciesParabacteroides_goldsteinii-0.0010.9640.974
speciesLactococcus_phage_936_sensu_lato0.0010.970.978
familyPodoviridae-0.0010.9790.983
speciesEscherichia_unclassified-0.0010.9790.983
speciesBacteroides_coprophilus-0.0010.9820.983
genusProteus0.00.9830.983
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
ObesityDenmark1691230.01256011434590.009829489046150.0882551752629680722.3833
Type II diabetesChina1831850.02015476798360.01789332660020.1482022733261156338.2134
Rheumatoid arthritisChina127980.01124148441120.01372030058430.148512677452715823.8703
Crohns diseaseSpain17660.01808318785770.01308509594650.1502407106961547651.458
Ulcerative colitisSpain78660.01201225344530.01308509594650.3408992798031497849.4095
Type II diabetesDenmark752770.0120061604360.01147238406910.5421423166812142870.2396
Liver cirrhosisChina1201140.02766675674710.0206904902290.6571368847932625588.1958
Colorectal cancerAustria64350.007619923892320.01202402613770.706217151692327178.7353
Type II diabetesSweden53920.003979494580290.004055421592460.7853082304392387880.8601
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382