MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated gene abundances and results from statistical analyses

Job details:

Submission date: 2021-02-21 08:10:08 PST
Job id & description: 2429, hydrolase
Query type: protein
Count queries & homologs: 1, 130
Min % identity & max e-value: 30%, 1e-5
Min % query & target coverage: 70%, 70%

Click here to download results

Table of contents:


Gut microbiome genes homologous to your query gene:

query_id target_id status kegg eggnog phylum genus query_cov target_cov percent_identity
BT21572973115CompleteunknownNOG42312BacteroidetesBacteroides100.0100.099.31
BT21572974318CompleteunknownNOG42312BacteroidetesBacteroides100.0100.097.24
BT21572984921CompleteunknownNOG42312BacteroidetesBacteroides100.0100.095.17
BT21572999103CompleteunknownNOG42312BacteroidetesBacteroides100.0100.090.69
BT21572993357CompleteunknownNOG42312BacteroidetesBacteroides100.0100.090.34
BT21573001874CompleteunknownNOG42312BacteroidetesBacteroides100.0100.088.97
BT21573020145Lack 5'-endunknownNOG42312BacteroidetesBacteroides100.099.6590.72
BT21573005303CompleteunknownNOG42312BacteroidetesBacteroides100.0100.090.38
BT21573012027CompleteunknownNOG42312BacteroidetesBacteroides100.0100.089.0
BT21572985136CompleteunknownNOG42312Bacteroidetesunknown100.0100.086.9
BT21573021540CompleteunknownNOG42312BacteroidetesBacteroides100.0100.087.93
BT21573001793CompleteunknownNOG42312Bacteroidetesunknown100.0100.086.55
BT21572965018CompleteunknownNOG42312Bacteroidetesunknown100.0100.086.94
BT21572961488CompleteunknownNOG42312Bacteroidetesunknown100.0100.083.16
BT21572957412CompleteunknownNOG42312Bacteroidetesunknown100.0100.080.76
BT21573748008Lack 3'-endunknownNOG42312BacteroidetesBacteroides84.83100.097.97
BT21572942131CompleteunknownNOG42312unknownunknown100.0100.080.14
BT21572944628CompleteunknownNOG42312unknownunknown100.0100.082.59
BT21572973273CompleteunknownNOG42312BacteroidetesBacteroides100.0100.082.76
BT21572963235CompleteunknownNOG42312BacteroidetesBacteroides100.0100.084.54
BT21572902191Lack 5'-endunknownNOG42312BacteroidetesBacteroides100.098.6483.85
BT21572839667Lack 5'-endunknownNOG42312BacteroidetesBacteroides100.097.3283.51
BT21572959057CompleteunknownNOG42312BacteroidetesBacteroides100.0100.083.51
BT21572877074CompleteunknownNOG42312unknownunknown100.0100.078.38
BT21573009127CompleteunknownNOG42312Bacteroidetesunknown100.0100.078.69
BT21572974580CompleteunknownNOG42312unknownunknown100.0100.076.9
BT21572993755CompleteunknownNOG42312unknownunknown100.0100.079.38
BT21573808109Lack 5'-endunknownNOG42312BacteroidetesBacteroides83.199.5990.87
BT21572955188CompleteunknownNOG42312BacteroidetesAlistipes100.0100.073.13
BT21572927131CompleteunknownNOG42312unknownunknown100.0100.072.11
BT21572927979CompleteunknownNOG42312BacteroidetesAlistipes100.0100.072.79
BT21572940195CompleteunknownNOG42312unknownunknown100.0100.071.33
BT21573003027CompleteunknownNOG42312unknownunknown99.3198.9673.1
BT21572800695Lack 5'-endunknownNOG42312BacteroidetesAlistipes100.096.6871.67
BT21573021432CompleteunknownNOG42312unknownunknown100.0100.070.89
BT21572928757CompleteunknownNOG42312Bacteroidetesunknown100.0100.071.77
BT21573018127CompleteunknownNOG42312unknownunknown99.3198.9670.93
BT21572936979CompleteunknownNOG42312BacteroidetesAlistipes100.0100.070.07
BT21572954146CompleteunknownNOG42312unknownunknown100.0100.072.45
BT21572942705CompleteunknownNOG42312unknownunknown100.0100.069.97
BT21573037458CompleteunknownNOG42312unknownunknown100.0100.072.16
BT21573541516Lack 5'-endunknownNOG42312BacteroidetesAlistipes88.62100.077.43
BT21572816903CompleteunknownNOG42312unknownunknown100.0100.067.44
BT21572611630CompleteunknownNOG42312unknownunknown100.092.3671.82
BT21573341412Lack 3'-endunknownNOG42312BacteroidetesAlistipes92.07100.071.59
BT21573036571CompleteunknownNOG42312unknownunknown100.0100.065.19
BT21572818225CompleteunknownNOG42312unknownunknown100.0100.066.67
BT21573264507CompleteunknownNOG42312unknownunknown99.6699.6363.32
BT21573010542CompleteunknownNOG42312unknownunknown100.0100.065.52
BT21574270724Lack 5'-endunknownNOG42312unknownunknown75.52100.080.45
BT21573250883CompleteunknownNOG42312unknownunknown100.0100.065.17
BT21573249007CompleteunknownNOG42312unknownunknown100.0100.062.41
BT21572879540CompleteunknownNOG42312unknownunknown93.190.8866.05
BT21573084623CompleteunknownNOG42312Bacteroidetesunknown100.0100.062.46
BT21572880526CompleteunknownNOG42312unknownunknown97.5995.2763.38
BT21573248116CompleteunknownNOG42312unknownunknown100.0100.063.79
BT21572877684CompleteunknownNOG42312unknownunknown97.2494.9362.9
BT21573106386CompleteunknownNOG42312BacteroidetesParabacteroides100.0100.062.2
BT21573073314CompleteunknownNOG42312Bacteroidetesunknown100.0100.061.43
BT21573074624CompleteunknownNOG42312Bacteroidetesunknown100.0100.063.14
BT21572958674CompleteunknownNOG42312unknownunknown93.7994.563.77
BT21573331807CompleteunknownNOG42312unknownunknown99.6699.6360.9
BT21573081364CompleteunknownNOG42312Bacteroidetesunknown100.0100.061.09
BT21573079632CompleteunknownNOG42312Bacteroidetesunknown100.0100.060.41
BT21573083529CompleteunknownNOG42312BacteroidetesParabacteroides100.0100.061.43
BT21572876778CompleteunknownNOG42312unknownunknown96.994.5961.35
BT21573724303Lack 3'-endunknownNOG42312unknownunknown84.1498.3970.61
BT21573541805CompleteunknownNOG42312unknownunknown78.2885.1673.13
BT21573098098CompleteunknownNOG42312BacteroidetesParabacteroides100.0100.060.27
BT21573088552CompleteunknownNOG42312unknownunknown94.4894.3564.49
BT21573070060CompleteunknownNOG42312BacteroidetesParabacteroides100.0100.059.73
BT21572887937Lack 5'-endunknownNOG42312BacteroidetesBacteroides100.095.9561.77
BT21572879835CompleteunknownNOG42312unknownunknown100.0100.058.19
BT21573099420CompleteunknownNOG42312BacteroidetesParabacteroides100.0100.059.93
BT21573243209Lack both endsunknownNOG42312unknownunknown98.2894.9161.19
BT21572947197Lack 3'-endunknownNOG42312unknownunknown98.2899.6660.0
BT21572784944CompleteunknownNOG42312unknownunknown99.6692.7260.34
BT21573591325CompleteunknownNOG42312unknownunknown80.088.1969.96
BT21573018690Lack 5'-endunknownNOG42312unknownunknown99.6698.2658.36
BT21572926146CompleteunknownNOG42312unknownunknown89.3189.4263.12
BT21573070385CompleteunknownNOG42312unknownunknown99.6699.359.25
BT21573093128CompleteunknownNOG42312unknownunknown100.0100.063.14
BT21573448637CompleteunknownNOG42312unknownunknown87.2493.164.43
BT21572938544CompleteunknownNOG42312unknownunknown95.8698.2957.29
BT21573426036Lack 5'-endunknownNOG42312unknownunknown100.099.2457.04
BT21573182749CompleteunknownNOG42312unknownunknown100.0100.058.62
BT21574126266Lack 5'-endunknownNOG42312unknownunknown80.69100.070.64
BT21572863409CompleteunknownNOG42312unknownunknown99.6699.6656.57
BT21574395598Lack 5'-endunknownNOG42312unknownunknown76.55100.070.85
BT21573007728CompleteunknownNOG42312unknownunknown99.6699.6556.51
BT21573475949CompleteunknownNOG42312unknownunknown100.0100.057.34
BT21573120058CompleteunknownNOG42312BacteroidetesBacteroides98.9799.2952.96
BT21573467247CompleteunknownNOG42312unknownunknown83.4589.6263.79
BT21573328556CompleteunknownNOG42312unknownunknown82.7688.0661.83
BT21572989006CompleteunknownNOG42312unknownunknown100.0100.055.7
BT21573019861CompleteunknownNOG42312unknownunknown98.9797.5751.72
BT21573326877CompleteunknownNOG42312unknownunknown81.0386.2559.66
BT21573075959CompleteunknownNOG42312unknownunknown98.9798.2451.39
BT21573255508CompleteunknownNOG42312unknownunknown96.998.951.25
BT21573254527CompleteunknownNOG42312unknownunknown99.6699.6349.13
BT21573231092Lack 5'-endunknownNOG42312BacteroidetesBacteroides99.6698.1845.08
BT21573330674CompleteunknownNOG42312BacteroidetesBacteroides99.66100.043.2
BT21573739323CompleteunknownNOG42312BacteroidetesParabacteroides78.6284.9644.54
BT21573652336Lack 5'-endunknownNOG42312BacteroidetesParabacteroides99.6697.639.31
BT21572939418CompleteunknownNOG42312BacteroidetesParabacteroides78.6271.3344.54
BT21573741599CompleteunknownNOG42312BacteroidetesParabacteroides78.6284.9644.54
BT21573818970Lack 5'-endunknownNOG42312unknownunknown79.3187.1945.45
BT21573686118Lack 5'-endunknownNOG136410unknownunknown88.2895.5838.08
BT21573468094CompleteunknownNOG136410unknownunknown99.6699.6236.86
BT21573312822CompleteunknownNOG136410unknownunknown97.2498.1436.93
BT21573429623CompleteunknownNOG136410unknownunknown99.3198.8536.3
BT21573705884CompleteunknownNOG136410unknownunknown85.8693.1537.94
BT21573330204CompleteunknownNOG136410unknownunknown96.2197.3938.6
BT21573443468CompleteunknownNOG136410unknownunknown99.3198.8535.62
BT21573329180CompleteunknownNOG136410unknownunknown96.2197.3936.84
BT21573870251Lack 5'-endunknownNOG136410BacteroidetesBacteroides78.9787.8739.66
BT21574565415Lack 5'-endunknownNOG136410BacteroidetesBacteroides77.2499.0341.23
BT21573849137CompleteunknownNOG136410unknownunknown86.5595.034.24
BT21573799951Lack 5'-endunknownNOG42312unknownunknown83.189.336.36
BT21573390823Lack 5'-endunknownNOG136410unknownunknown79.6680.3839.32
BT21573855906CompleteunknownNOG42312unknownunknown83.190.4235.54
BT21573612095CompleteunknownNOG136410unknownunknown78.9782.9437.5
BT21573749889CompleteunknownNOG136410unknownunknown78.9785.7139.22
BT21573724034Lack 5'-endunknownNOG136410BacteroidetesBacteroides87.2493.9336.61
BT21573841017CompleteunknownNOG136410unknownunknown83.190.4233.74
BT21573308760Lack 5'-endunknownNOG136410BacteroidetesBacteroides97.2498.1533.56
BT21573491075Lack both endsK00020NOG74748unknownunknown82.7685.033.61
BT21573154855Lack both endsunknownNOG74748BacteroidetesAlistipes83.4579.6433.06
BT21573856730Lack 3'-endunknownNOG74748BacteroidetesParabacteroides77.5980.9132.48
BT21573499872CompleteunknownNOG74748BacteroidetesBacteroides79.6684.8830.67
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The abundance of your query across gut microbiome samples:




The prevalence of your query across gut microbiome samples:




Taxonomic groups correlated with your query gene:

tax_level tax_name spearman_rho pvalue qvalue
familyBacteroidaceae0.7440.00.0
genusBacteroides0.7440.00.0
genusParabacteroides0.6873.77e-2615.93e-259
familyPorphyromonadaceae0.6337.07e-2108.34e-208
phylumBacteroidetes0.6262e-2041.38e-202
classBacteroidia0.6262.05e-2041.38e-202
orderBacteroidales0.6262.05e-2041.38e-202
phylumFirmicutes-0.5431.29e-1437.61e-142
speciesBacteroides_thetaiotaomicron0.4822.04e-1091.07e-107
speciesBacteroides_ovatus0.4781.95e-1079.2e-106
classClostridia-0.4655.37e-1012.11e-99
orderClostridiales-0.4655.37e-1012.11e-99
genusDorea-0.4552.02e-967.33e-95
speciesBacteroides_uniformis0.4529.08e-953.06e-93
speciesRuminococcus_obeum-0.4263.92e-831.23e-81
familyLachnospiraceae-0.4183.81e-801.12e-78
speciesDorea_longicatena-0.4159.09e-792.52e-77
speciesDorea_formicigenerans-0.3984.93e-721.29e-70
genusCoprococcus-0.3882.62e-686.51e-67
speciesCoprococcus_catus-0.3818.37e-661.98e-64
phylumActinobacteria-0.3713.26e-626.99e-61
classActinobacteria-0.3713.26e-626.99e-61
familyRikenellaceae0.3714.21e-628.28e-61
genusAlistipes0.3714.21e-628.28e-61
classBacilli-0.3685.84e-611.1e-59
orderLactobacillales-0.3671.1e-602e-59
familyRuminococcaceae-0.3662e-603.5e-59
orderCoriobacteriales-0.3572.39e-573.89e-56
familyCoriobacteriaceae-0.3572.39e-573.89e-56
familyOscillospiraceae0.3563.9e-575.94e-56
genusOscillibacter0.3563.9e-575.94e-56
speciesCollinsella_aerofaciens-0.3565.34e-577.88e-56
speciesClostridiales_bacterium_1_7_47FAA0.3551.03e-561.43e-55
genusFlavonifractor0.3551.06e-561.43e-55
speciesFlavonifractor_plautii0.3551.06e-561.43e-55
speciesEubacterium_hallii-0.3543.33e-564.37e-55
speciesCoprococcus_comes-0.3476.78e-548.65e-53
familyStreptococcaceae-0.349.73e-521.21e-50
familyClostridiales_noname0.3384.5e-515.45e-50
genusCollinsella-0.337.9e-499.32e-48
genusStreptococcus-0.331.33e-481.53e-47
speciesOscillibacter_unclassified0.3261.08e-471.21e-46
familyActinomycetaceae-0.3247.18e-477.88e-46
speciesBacteroides_xylanisolvens0.3238.31e-478.91e-46
genusActinomyces-0.3231.05e-461.1e-45
speciesClostridium_citroniae0.3222.1e-462.15e-45
speciesClostridium_bolteae0.3222.31e-462.32e-45
orderBifidobacteriales-0.3143.31e-443.19e-43
familyBifidobacteriaceae-0.3143.31e-443.19e-43
genusBifidobacterium-0.3145.52e-445.21e-43
speciesStreptococcus_salivarius-0.3112.44e-432.26e-42
orderActinomycetales-0.3073.08e-422.8e-41
speciesAnaerostipes_hadrus-0.3035.62e-415e-40
speciesBacteroides_fragilis0.3028.25e-417.21e-40
speciesRuminococcus_sp_5_1_39BFAA-0.2994.7e-404.03e-39
speciesParabacteroides_distasonis0.2958.92e-397.52e-38
speciesClostridium_symbiosum0.2941.01e-388.36e-38
speciesClostridium_hathewayi0.2932.14e-381.74e-37
genusRuminococcus-0.2923.33e-382.66e-37
speciesBacteroides_vulgatus0.2924.19e-383.3e-37
genusClostridiales_noname0.2892.61e-372.02e-36
speciesEubacterium_ramulus-0.2884.36e-373.32e-36
genusPeptostreptococcaceae_noname-0.2876.85e-375.13e-36
familyPeptostreptococcaceae-0.2878.4e-376.19e-36
speciesOdoribacter_splanchnicus0.2822.12e-351.54e-34
speciesClostridium_asparagiforme0.285.52e-353.95e-34
speciesBifidobacterium_adolescentis-0.286.01e-354.23e-34
speciesParabacteroides_unclassified0.2799.56e-356.64e-34
speciesLachnospiraceae_bacterium_5_1_63FAA-0.2758.38e-345.73e-33
genusOdoribacter0.2725.87e-333.96e-32
familyLactobacillaceae-0.2628.04e-315.34e-30
genusLactobacillus-0.2611.53e-301e-29
speciesEubacterium_biforme-0.2612.11e-301.36e-29
familyEubacteriaceae-0.2595.2e-303.32e-29
genusEubacterium-0.2586.38e-304.02e-29
speciesBilophila_unclassified0.2587.2e-304.47e-29
speciesStreptococcus_parasanguinis-0.2588.19e-305.02e-29
genusBilophila0.2589e-305.45e-29
speciesStreptococcus_sanguinis-0.2562.26e-291.35e-28
classDeltaproteobacteria0.2512.79e-281.61e-27
orderDesulfovibrionales0.2512.79e-281.61e-27
familyDesulfovibrionaceae0.2512.79e-281.61e-27
orderBacillales-0.2481.57e-278.93e-27
familyBacillales_noname-0.2471.78e-279.88e-27
genusGemella-0.2471.78e-279.88e-27
genusBlautia-0.246.74e-263.7e-25
speciesBifidobacterium_longum-0.248.04e-264.36e-25
genusSolobacterium-0.2391.05e-255.57e-25
speciesSolobacterium_moorei-0.2391.05e-255.57e-25
speciesAnaerotruncus_colihominis0.2364.02e-252.11e-24
speciesAlistipes_onderdonkii0.2355.74e-252.98e-24
genusOlsenella-0.2331.91e-249.8e-24
speciesStreptococcus_thermophilus-0.2323.35e-241.7e-23
genusAnaerostipes-0.2291.03e-235.17e-23
speciesPeptostreptococcaceae_noname_unclassified-0.2291.14e-235.66e-23
speciesBacteroides_nordii0.2272.36e-231.16e-22
genusErysipelotrichaceae_noname-0.2272.86e-231.39e-22
classErysipelotrichia-0.2241.28e-225.92e-22
orderErysipelotrichales-0.2241.28e-225.92e-22
familyErysipelotrichaceae-0.2241.28e-225.92e-22
speciesBilophila_wadsworthia0.2241.28e-225.92e-22
speciesMethanobrevibacter_smithii-0.2241.28e-225.92e-22
speciesOlsenella_unclassified-0.2223.17e-221.44e-21
genusAdlercreutzia-0.2223.2e-221.44e-21
speciesAdlercreutzia_equolifaciens-0.2223.2e-221.44e-21
classMethanobacteria-0.2191.03e-214.5e-21
orderMethanobacteriales-0.2191.03e-214.5e-21
familyMethanobacteriaceae-0.2191.03e-214.5e-21
speciesRothia_mucilaginosa-0.2181.61e-216.97e-21
familyMicrococcaceae-0.2181.71e-217.34e-21
genusMethanobrevibacter-0.2181.83e-217.78e-21
genusRothia-0.2171.93e-218.13e-21
speciesClostridium_clostridioforme0.2147.1e-212.97e-20
phylumEuryarchaeota-0.2131.27e-205.26e-20
familyPrevotellaceae-0.2122e-208.21e-20
speciesPrevotella_copri-0.2122.3e-209.36e-20
speciesStreptococcus_vestibularis-0.215.03e-202.03e-19
speciesBacteroides_cellulosilyticus0.2062.15e-198.6e-19
classBetaproteobacteria0.2044.73e-191.88e-18
orderBurkholderiales0.2036.92e-192.72e-18
genusFaecalibacterium-0.2021.05e-184.06e-18
speciesFaecalibacterium_prausnitzii-0.2021.05e-184.06e-18
speciesStreptococcus_mutans-0.23.03e-181.16e-17
speciesParabacteroides_merdae0.1993.49e-181.33e-17
speciesRuminococcus_torques-0.1985.39e-182.04e-17
speciesEubacterium_rectale-0.1979.38e-183.51e-17
speciesStreptococcus_mitis_oralis_pneumoniae-0.1961.17e-174.35e-17
speciesBacteroides_dorei0.1942.73e-171.01e-16
speciesBacteroides_caccae0.1934.47e-171.64e-16
speciesLachnospiraceae_bacterium_7_1_58FAA0.1891.64e-165.95e-16
familyLeuconostocaceae-0.1882.15e-167.75e-16
genusPrevotella-0.1882.65e-169.48e-16
speciesClostridium_bartlettii-0.1865.78e-162.05e-15
speciesStreptococcus_anginosus-0.1841.01e-153.56e-15
speciesOscillibacter_sp_KLE_17450.1841.12e-153.92e-15
speciesPropionibacterium_freudenreichii-0.1831.71e-155.93e-15
genusClostridiaceae_noname0.1822.04e-156.98e-15
speciesClostridiaceae_bacterium_JC1180.1822.04e-156.98e-15
speciesAnaerostipes_unclassified0.1822.07e-157.03e-15
speciesFusobacterium_ulcerans0.1822.27e-157.65e-15
speciesAlistipes_putredinis0.1812.9e-159.71e-15
speciesLactobacillus_rhamnosus-0.1812.94e-159.77e-15
genusLeuconostoc-0.1813.6e-151.19e-14
speciesStreptococcus_gordonii-0.1795.68e-151.86e-14
speciesStreptococcus_australis-0.1788.35e-152.72e-14
speciesBifidobacterium_dentium-0.1789e-152.91e-14
familySutterellaceae0.1726.4e-142.05e-13
genusLactococcus-0.1727.28e-142.32e-13
genusPropionibacterium-0.171.17e-133.71e-13
speciesCoprococcus_sp_ART55_1-0.1692.11e-136.64e-13
speciesAlistipes_shahii0.1665.14e-131.61e-12
speciesBifidobacterium_animalis-0.1657.09e-132.2e-12
speciesTuricibacter_sanguinis-0.1649.19e-132.84e-12
genusCatenibacterium-0.1621.86e-125.66e-12
speciesCatenibacterium_mitsuokai-0.1621.86e-125.66e-12
speciesBacteroides_stercoris0.1612.43e-127.35e-12
speciesRuminococcus_bromii-0.163.6e-121.08e-11
genusLachnospiraceae_noname-0.1561.04e-113.11e-11
genusTuricibacter-0.1561.19e-113.53e-11
familyClostridiaceae0.1561.21e-113.57e-11
genusParasutterella0.1561.23e-113.58e-11
speciesParasutterella_excrementihominis0.1561.23e-113.58e-11
genusButyricimonas0.1551.83e-115.27e-11
speciesButyricimonas_synergistica0.1551.83e-115.27e-11
speciesOscillibacter_sp_KLE_17280.1532.64e-117.55e-11
genusPhascolarctobacterium-0.1523.88e-111.1e-10
speciesPhascolarctobacterium_succinatutens-0.1523.88e-111.1e-10
genusClostridium0.1514.71e-111.32e-10
speciesLactobacillus_casei_paracasei-0.1491.03e-102.88e-10
speciesAlistipes_finegoldii0.1481.15e-103.19e-10
speciesRuminococcus_callidus-0.1481.45e-104e-10
speciesLactococcus_lactis-0.1471.57e-104.31e-10
familyBurkholderiales_noname0.1462.19e-105.98e-10
genusMethanosphaera-0.1462.34e-106.3e-10
speciesMethanosphaera_stadtmanae-0.1462.34e-106.3e-10
genusParaprevotella-0.1462.35e-106.3e-10
genusBurkholderiales_noname0.1462.54e-106.74e-10
speciesBurkholderiales_bacterium_1_1_470.1462.54e-106.74e-10
speciesEubacterium_sp_3_1_310.1452.62e-106.91e-10
speciesParaprevotella_unclassified-0.1453.25e-108.52e-10
familyEnterococcaceae-0.1443.59e-109.36e-10
genusEnterococcus-0.1443.84e-109.96e-10
speciesRuminococcus_gnavus0.1434.89e-101.26e-09
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speciesSubdoligranulum_unclassified-0.1418.25e-102.1e-09
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speciesLactobacillus_delbrueckii-0.1391.4e-093.53e-09
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genusButyrivibrio-0.1354.9e-091.21e-08
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genusSubdoligranulum-0.1346.6e-091.6e-08
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genusPeptostreptococcus-0.1321.08e-082.57e-08
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speciesMitsuokella_multacida-0.131.82e-084.27e-08
speciesClostridium_sp_L2_50-0.1283.1e-087.24e-08
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speciesBacteroides_oleiciplenus0.1255.95e-081.36e-07
genusMitsuokella-0.122.1e-074.79e-07
speciesGemella_morbillorum-0.1192.56e-075.81e-07
speciesDialister_succinatiphilus-0.1183.32e-077.5e-07
speciesMitsuokella_unclassified-0.1173.8e-078.54e-07
speciesMethanobrevibacter_unclassified-0.1164.64e-071.04e-06
speciesWeissella_cibaria-0.1164.74e-071.06e-06
speciesPeptostreptococcus_stomatis-0.1156.09e-071.35e-06
speciesBifidobacterium_bifidum-0.1156.1e-071.35e-06
genusHoldemania0.1147.95e-071.75e-06
speciesHoldemania_sp_AP20.1138.84e-071.93e-06
speciesClostridium_nexile0.1121.23e-062.68e-06
speciesEubacterium_ventriosum-0.111.72e-063.72e-06
speciesBacteroides_sp_2_1_220.111.99e-064.29e-06
speciesAlistipes_sp_AP110.1073.4e-067.29e-06
speciesLactobacillus_fermentum-0.1073.58e-067.65e-06
speciesRoseburia_inulinivorans-0.1063.95e-068.4e-06
speciesLachnospiraceae_bacterium_5_1_57FAA0.1046.39e-061.35e-05
speciesCoprobacillus_unclassified0.1046.97e-061.47e-05
speciesParabacteroides_goldsteinii0.1037.53e-061.58e-05
speciesLactobacillus_plantarum-0.1029.46e-061.98e-05
phylumViruses_noname-0.1029.73e-062.01e-05
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speciesLactococcus_garvieae-0.1021.09e-052.25e-05
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speciesLachnospiraceae_bacterium_8_1_57FAA-0.1011.26e-052.57e-05
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genusWeissella-0.11.36e-052.76e-05
speciesEggerthella_sp_1_3_56FAA-0.11.39e-052.8e-05
speciesParaprevotella_xylaniphila-0.11.54e-053.09e-05
speciesParvimonas_unclassified-0.11.6e-053.19e-05
genusParvimonas-0.11.61e-053.19e-05
genusCoprobacillus0.11.61e-053.19e-05
familyPropionibacteriaceae-0.0991.75e-053.46e-05
speciesBacteroides_coprocola-0.0972.53e-054.98e-05
speciesKlebsiella_oxytoca-0.0972.58e-055.05e-05
speciesBacteroides_plebeius-0.0972.83e-055.52e-05
phylumProteobacteria0.0962.99e-055.81e-05
speciesEggerthella_unclassified0.0954.21e-058.14e-05
speciesClostridium_perfringens-0.0944.68e-059.02e-05
speciesRoseburia_intestinalis-0.0935.82e-050.000112
phylumFusobacteria0.0926.67e-050.000126
classFusobacteriia0.0926.67e-050.000126
orderFusobacteriales0.0926.67e-050.000126
speciesEubacterium_dolichum0.0926.69e-050.000126
genusAnaerotruncus0.0926.82e-050.000128
familyClostridiales_Family_XI_Incertae_Sedis-0.0926.92e-050.00013
genusGordonibacter-0.0917.91e-050.000147
speciesGordonibacter_pamelaeae-0.0917.91e-050.000147
orderViruses_noname-0.0918.08e-050.00015
classNegativicutes-0.099.11e-050.000167
orderSelenomonadales-0.099.11e-050.000167
speciesEubacterium_eligens-0.090.0001020.000187
familyFusobacteriaceae0.090.0001030.000188
speciesRuminococcus_champanellensis-0.090.0001050.000191
orderPseudomonadales-0.090.0001060.000192
speciesEnterobacter_cloacae-0.0890.000110.000198
genusRoseburia-0.0890.0001210.000217
speciesSubdoligranulum_sp_4_3_54A2FAA0.0890.0001260.000225
genusEnterobacter-0.0880.0001340.000239
speciesLactococcus_phage_P680-0.0870.0001740.000308
speciesClostridium_ramosum0.0870.0001740.000308
speciesMegasphaera_elsdenii-0.0860.0002050.000361
genusSiphoviridae_noname-0.0850.0002410.000423
speciesLactobacillus_sanfranciscensis-0.0850.0002530.000442
genusFusobacterium0.0840.0002550.000444
speciesParabacteroides_johnsonii0.0840.0002690.000467
speciesDesulfovibrio_desulfuricans0.0840.0002810.000486
speciesRoseburia_hominis-0.0840.0002990.000515
speciesWeissella_confusa-0.0830.000310.000532
speciesPrevotella_stercorea-0.0810.0004240.000725
speciesEubacterium_cylindroides-0.0810.000450.000767
speciesLachnospiraceae_bacterium_6_1_63FAA0.0790.0005880.000998
genusEggerthella0.0790.0006260.00106
speciesBlautia_producta0.0790.0006450.00109
genusAcidaminococcaceae_unclassified0.0780.0007120.0012
speciesBacteroides_pectinophilus-0.0780.0007440.00125
speciesLachnospiraceae_bacterium_9_1_43BFAA0.0770.0008220.00137
speciesBacteroides_sp_1_1_60.0760.0009660.00161
speciesPrevotella_bivia0.0760.001030.00171
speciesAlistipes_indistinctus0.0750.001230.00203
speciesLachnospiraceae_bacterium_1_4_56FAA0.0720.001740.00286
phylumVerrucomicrobia-0.070.002490.00401
classVerrucomicrobiae-0.070.002490.00401
orderVerrucomicrobiales-0.070.002490.00401
familyVerrucomicrobiaceae-0.070.002490.00401
genusAkkermansia-0.070.002490.00401
speciesAkkermansia_muciniphila-0.070.002490.00401
speciesBacteroides_clarus0.070.00260.00417
familyAcidaminococcaceae-0.0690.00280.00448
speciesClostridium_sp_KLE_17550.0690.002930.00467
speciesDesulfovibrio_piger-0.0680.003370.00536
familyVeillonellaceae-0.0680.003450.00546
speciesLactobacillus_mucosae-0.0670.003640.00575
speciesVeillonella_unclassified-0.0670.003980.00626
speciesCollinsella_intestinalis0.0660.004470.00701
speciesHaemophilus_paraphrohaemolyticus-0.0650.004650.00727
speciesLeuconostoc_lactis-0.0650.005170.00805
speciesLachnospiraceae_bacterium_2_1_46FAA0.0640.005650.00877
phylumSynergistetes0.0630.006020.00923
classSynergistia0.0630.006020.00923
orderSynergistales0.0630.006020.00923
familySynergistaceae0.0630.006020.00923
speciesEscherichia_unclassified-0.0630.006210.00949
speciesLactobacillus_crispatus-0.0620.006950.0106
speciesLachnospiraceae_bacterium_3_1_46FAA-0.0620.007140.0108
genusVeillonella-0.0610.008120.0123
genusActinobacillus-0.0610.008330.0125
speciesActinobacillus_unclassified-0.0610.008330.0125
speciesLachnospiraceae_bacterium_3_1_57FAA_CT10.0610.008540.0128
familySiphoviridae-0.060.009030.0135
speciesErysipelotrichaceae_bacterium_21_3-0.060.009150.0136
speciesLachnospiraceae_bacterium_2_1_58FAA0.060.009310.0138
orderCaudovirales-0.060.009550.0141
genusPyramidobacter0.060.009590.0141
speciesPyramidobacter_piscolens0.060.009590.0141
speciesAlistipes_sp_HGB50.060.009790.0144
speciesMegamonas_funiformis-0.060.009950.0145
speciesBacteroides_salyersiae0.060.010.0146
speciesStreptococcus_lutetiensis-0.0590.01090.0158
speciesErysipelotrichaceae_bacterium_5_2_54FAA0.0560.01490.0216
speciesBacteroides_coprophilus-0.0550.0180.026
genusMorganella0.0540.01940.0278
speciesMorganella_morganii0.0540.01940.0278
speciesErysipelotrichaceae_bacterium_3_1_530.0540.02060.0295
familyStaphylococcaceae-0.0530.02240.0319
speciesLactococcus_phage_jm2-0.0530.02260.0321
genusStaphylococcus-0.0520.02420.0343
familyMyoviridae-0.0510.02610.0369
speciesLachnospiraceae_bacterium_1_1_57FAA-0.0490.03240.0457
speciesHoldemania_filiformis0.0490.03420.048
classGammaproteobacteria-0.0480.03640.051
speciesOdoribacter_unclassified-0.0480.03770.0526
speciesEnterobacter_aerogenes-0.0480.03850.0536
speciesLactobacillus_vaginalis-0.0470.04020.0558
speciesVeillonella_parvula-0.0470.04060.0562
speciesLactobacillus_oris-0.0470.04070.0562
genusAggregatibacter-0.0470.04310.0593
speciesLactobacillus_amylovorus-0.0470.04320.0593
speciesCitrobacter_freundii-0.0470.04420.0605
speciesCitrobacter_unclassified-0.0460.04690.064
speciesBifidobacterium_breve-0.0450.05020.0683
speciesHaemophilus_sputorum-0.0450.0520.0705
speciesBacteroides_eggerthii-0.0450.05220.0706
speciesPrevotella_buccae0.0440.05560.075
speciesVeillonella_atypica-0.0440.05580.075
speciesMegamonas_hypermegale-0.0440.05610.0752
speciesSutterella_parvirubra0.0440.0580.0776
genusButyricicoccus0.0430.06050.0804
speciesButyricicoccus_pullicaecorum0.0430.06050.0804
speciesAcidaminococcus_unclassified0.0430.06080.0806
speciesBacteroides_faecis0.0430.06140.0812
genusCitrobacter-0.0430.06170.0813
speciesLactobacillus_acidophilus-0.0420.06630.0872
genusSlackia-0.0420.07220.0947
speciesFusobacterium_mortiferum0.0410.07750.101
speciesSutterella_wadsworthensis-0.040.08090.105
speciesButyrivibrio_unclassified-0.0390.08810.115
speciesSlackia_piriformis-0.0390.09030.117
genusHaemophilus-0.0390.09040.117
speciesLactobacillus_salivarius-0.0390.09170.118
orderPasteurellales-0.0390.09280.119
familyPasteurellaceae-0.0390.09280.119
familyViruses_noname-0.0390.09440.12
genusViruses_noname-0.0390.09440.12
speciesHaemophilus_parainfluenzae-0.0380.1010.128
speciesClostridium_spiroforme-0.0370.1090.138
speciesMegamonas_unclassified-0.0370.1120.142
genusMegamonas-0.0370.1130.143
speciesBifidobacterium_angulatum-0.0370.1140.143
familyPodoviridae0.0360.1150.144
speciesEubacterium_limosum0.0360.1170.146
genusSutterellaceae_unclassified0.0360.1190.149
speciesLactobacillus_reuteri-0.0360.1210.151
speciesFusobacterium_nucleatum-0.0360.1250.155
familyBacteroidales_noname0.0350.1310.161
genusBacteroidales_noname0.0350.1310.161
speciesBifidobacterium_pseudocatenulatum-0.0350.1310.161
speciesBacteroidales_bacterium_ph80.0350.1310.161
genusMyoviridae_noname-0.0350.1350.166
genusKlebsiella-0.0340.1360.166
speciesAggregatibacter_segnis-0.0340.1390.17
speciesEggerthella_lenta-0.0340.1410.172
genusLambdalikevirus-0.0340.1450.176
genusPeptoniphilus0.0330.1510.182
speciesCollinsella_tanakaei0.0330.1510.182
speciesStreptococcus_pasteurianus0.0330.1530.184
orderEnterobacteriales-0.0330.1580.189
familyEnterobacteriaceae-0.0330.1580.189
speciesCoriobacteriaceae_bacterium_phI0.0320.1680.201
genusDialister-0.0310.1790.213
speciesHoldemania_unclassified0.030.1940.231
speciesBacteroides_massiliensis0.030.1960.232
genusRuminococcaceae_noname0.030.1970.232
speciesRuminococcaceae_bacterium_D160.030.1970.232
speciesKlebsiella_unclassified0.0290.210.247
speciesCampylobacter_concisus-0.0280.2220.261
genusCoriobacteriaceae_noname0.0270.2360.276
speciesAnaerotruncus_unclassified-0.0270.2440.285
genusSutterella-0.0270.2480.289
speciesKlebsiella_sp_MS_92_3-0.0260.2550.296
genusBarnesiella-0.0260.2580.298
speciesBarnesiella_intestinihominis-0.0260.2580.298
speciesPeptostreptococcus_anaerobius-0.0260.2670.308
genusAcidaminococcus0.0250.2750.317
speciesAlistipes_senegalensis-0.0250.2760.317
speciesBacteroides_sp_3_1_190.0250.2790.32
genusDesulfovibrio0.0240.2920.334
genusTunalikevirus-0.0230.3180.362
speciesLactococcus_phage_phi7-0.0230.3180.362
genusCoprobacter0.0220.3470.393
speciesCoprobacter_fastidiosus0.0220.3470.393
familyOxalobacteraceae0.0210.3570.403
speciesStreptococcus_infantarius-0.0210.3740.42
speciesDialister_invisus0.0210.3740.42
genusOxalobacter0.020.3880.434
speciesOxalobacter_formigenes0.020.3880.434
genusProteus-0.020.390.435
speciesAcidaminococcus_fermentans-0.020.3920.436
speciesAlistipes_unclassified0.0190.4010.445
speciesErysipelotrichaceae_bacterium_6_1_450.0190.4130.458
speciesKlebsiella_pneumoniae-0.0190.4210.465
genusPseudoflavonifractor0.0190.4230.465
speciesPseudoflavonifractor_capillosus0.0190.4230.465
speciesBacteroides_sp_4_3_47FAA0.0170.4510.495
orderAeromonadales-0.0170.4640.508
speciesOdoribacter_laneus-0.0170.4720.516
genusPantoea-0.0160.4830.525
speciesPantoea_unclassified-0.0160.4830.525
speciesKlebsiella_phage_KP36-0.0150.5090.552
speciesErysipelotrichaceae_bacterium_2_2_44A0.0150.5110.553
speciesCoprobacillus_sp_29_10.0130.5640.609
speciesAcidaminococcus_intestini0.0120.610.657
speciesBacteroides_finegoldii0.0120.6150.661
speciesPorphyromonas_uenonis-0.0120.6160.661
genusMegasphaera-0.0110.620.664
speciesLactococcus_phage_936_sensu_lato0.0110.6390.682
speciesBacteroides_fluxus-0.0110.6460.688
speciesProteus_mirabilis-0.010.6670.709
speciesEnterobacteria_phage_HK5440.010.6690.71
speciesClostridium_leptum-0.010.6790.719
speciesCoprobacillus_sp_D60.0090.7080.748
speciesBacteroides_salanitronis0.0080.7320.771
speciesStreptococcus_phage_Sfi210.0080.740.776
speciesEscherichia_coli0.0080.740.776
speciesC2likevirus_unclassified0.0080.7450.779
speciesParabacteroides_sp_20_3-0.0080.7460.779
genusC2likevirus0.0070.7580.79
speciesBlautia_hydrogenotrophica-0.0070.7630.793
speciesMegasphaera_micronuciformis-0.0060.7910.821
genusEscherichia-0.0060.8030.831
genusPorphyromonas-0.0040.8620.89
speciesRoseburia_unclassified0.0030.8910.918
speciesPorphyromonas_asaccharolytica0.0030.8990.924
genusSuccinatimonas0.0020.9260.948
speciesSuccinatimonas_hippei0.0020.9260.948
classEpsilonproteobacteria-0.0020.940.958
orderCampylobacterales-0.0020.940.958
speciesVeillonella_dispar-0.0010.9490.965
speciesParabacteroides_sp_D130.0010.9590.972
speciesMegamonas_rupellensis-0.0010.960.972
speciesLactococcus_phage_bIL670.0010.9680.978
speciesBacteroides_barnesiae0.0010.970.978
genusCampylobacter0.0010.9720.978
familySuccinivibrionaceae0.00.9830.987
speciesMegasphaera_unclassified0.00.9860.988
familyCampylobacteraceae0.00.9980.998
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Association of query gene abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean pvalue rank percentile
Type II diabetesChina1831850.2462776630160.1899056008810.00036689213675211733.87653
Crohns diseaseSpain17660.22396126310.1351769064890.00317046417672594219.7573
Type II diabetesDenmark752770.1958508135340.1579913346480.0664389523851818526.8299
Rheumatoid arthritisChina127980.125645898240.1129042266640.0712001312508410813.6993
ObesityDenmark1691230.1629792793750.1493916244710.0728679527989615420.2361
Type II diabetesSweden53920.07340783705080.06895075305370.5022644176741619054.8256
Ulcerative colitisSpain78660.1193321176870.1351769064890.50987713381936763.888
Colorectal cancerAustria64350.04974449011890.04666469844020.7391147326972391980.9277
Liver cirrhosisChina1201140.195972302830.1795409382650.8755591765662835295.24
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382