MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: NOG115343
Description: ABC transporter, permease protein

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The abundance of NOG115343 across gut microbiome samples:





The prevalence of NOG115343 across gut microbiome samples:





Association of NOG115343 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.001271817328010.002802343584970.000531642847225673122.6108
Rheumatoid arthritisChina127980.003992989935110.003858762407540.015049970326713884.62867
Type II diabetesDenmark752770.01508433011450.01052461548710.07309040147849727.8526
Crohns diseaseSpain17660.01337130641610.01405289122970.1029927934251388246.1563
Type II diabetesSweden53920.02020306733390.02325356492660.124850098801444915.066
Type II diabetesChina1831850.006037951222810.004533186813850.1478082280011154138.1407
Colorectal cancerAustria64350.02877311423630.01242718376620.214748759132939231.777
Ulcerative colitisSpain78660.01227309211250.01405289122970.4940887852091898462.6229
ObesityDenmark1691230.01200574066950.008295428695320.5779611424442118069.6459
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382