MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: NOG115706
Description: ABC transporter permease

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The abundance of NOG115706 across gut microbiome samples:





The prevalence of NOG115706 across gut microbiome samples:





Association of NOG115706 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.0002291857548072.47452040448e-058.77297471434e-05502416.8766
Ulcerative colitisSpain78660.0009072822549045.81227164234e-050.0004276041692233961.30633
Type II diabetesChina1831850.004323323138860.0001019609246850.1819984798551272842.0635
Colorectal cancerAustria64350.0006894932246840.0002611959797960.5103028075831849962.5897
Rheumatoid arthritisChina127980.0003605071609870.000321401582350.7251415172462304976.8633
Type II diabetesDenmark752775.31774506089e-058.96755464459e-050.7397276661232550483.5988
Crohns diseaseSpain17660.004643686979735.81227164234e-050.9530599147582944297.8936
ObesityDenmark1691230.000144810087759.39444595002e-060.9594441751812958797.2888
Type II diabetesSweden53920.0003336867169610.0001956228476890.9723530043812877697.4467
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382