MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: NOG124559
Description: ABC transporter permease protein

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The abundance of NOG124559 across gut microbiome samples:





The prevalence of NOG124559 across gut microbiome samples:





Association of NOG124559 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.0006558856465940.001230477442090.00270143951468871829.2855
Type II diabetesDenmark752770.002907688197930.002303281190320.043958548895687622.5391
Colorectal cancerAustria64350.001886460526690.002057337504810.3514735856161384646.8467
Type II diabetesChina1831850.001527089988660.001743741605170.4061369835311901562.8408
Ulcerative colitisSpain78660.002057122914310.002280248274820.4188133035241722556.8219
Rheumatoid arthritisChina127980.001220696451920.001297878394210.4251423096661554751.8458
Type II diabetesSweden53920.003822643900250.004652761433860.5676555094431780460.2912
ObesityDenmark1691230.002656889781950.001772824831310.7518332105832510682.5557
Crohns diseaseSpain17660.005156732873090.002280248274820.9774755976132971598.803
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382