MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: NOG137620
Description: ABC transporter, ATP-binding protein

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The abundance of NOG137620 across gut microbiome samples:





The prevalence of NOG137620 across gut microbiome samples:





Association of NOG137620 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Ulcerative colitisSpain78660.08123194754950.05515146208820.014858366910123497.74725
Colorectal cancerAustria64350.02620925353180.008537977627250.039329197684823547.96285
ObesityDenmark1691230.08712879791160.04784447726080.0789907085805645921.239
Liver cirrhosisChina1201140.1388501976530.09829083135560.08388112484411608154.0193
Crohns diseaseSpain17660.04360003028420.05515146208820.1180795680191437847.8055
Type II diabetesChina1831850.09864869779250.1458239596960.2440275316541460448.2617
Rheumatoid arthritisChina127980.06862515733070.0792663419560.2520807617991048634.9685
Type II diabetesDenmark752770.06420535223340.07128758374740.290012989541538650.4343
Type II diabetesSweden53920.02171032636310.01068973794090.356206249651189040.2641
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382