MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: NOG15012
Description: Antibiotic-Transport integral membrane leucine and valine rich protein ABC transporter

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The abundance of NOG15012 across gut microbiome samples:





The prevalence of NOG15012 across gut microbiome samples:





Association of NOG15012 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesChina1831850.0165655382260.008276779949590.0006584401284314274.71595
Crohns diseaseSpain17660.02315041732260.01011790287660.00104504784817421414.0116
Liver cirrhosisChina1201140.0112537160340.006292314652360.008120585333241041934.9978
Rheumatoid arthritisChina127980.005987230925060.00594011932080.134509150301673222.4497
Type II diabetesDenmark752770.005367017816170.004072502502730.1623377283091182338.755
Colorectal cancerAustria64350.007991521130070.001772941471630.263514237221096437.0957
Ulcerative colitisSpain78660.006226609617230.01011790287660.3044699213791393245.959
ObesityDenmark1691230.00318321213690.005317673277770.6036874529512174671.507
Type II diabetesSweden53920.003383597915070.004366647976360.9618195505392847596.4274
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382