MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: NOG259139
Description: Bacteriocin ABC transporter, permease protein subunit

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The abundance of NOG259139 across gut microbiome samples:





The prevalence of NOG259139 across gut microbiome samples:





Association of NOG259139 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesDenmark752770.0001050883445234.61234900016e-050.0452795932971695522.798
Crohns diseaseSpain17660.08.13168251331e-050.06112820130461219840.5569
Rheumatoid arthritisChina127982.17679842636e-050.00.0777050921174441414.718
Colorectal cancerAustria64356.99549665342e-051.92760290312e-050.149977440964683423.1222
Type II diabetesChina1831857.71934546286e-060.00.2966223919521611053.2387
Liver cirrhosisChina1201140.05.24283345919e-060.3194237893292167972.8241
Type II diabetesSweden53929.79618331864e-050.0001697786147140.3599078696081197940.5638
Ulcerative colitisSpain78663.98262087644e-058.13168251331e-050.3968654457461667054.9911
ObesityDenmark1691234.48700376637e-054.75147412094e-050.624703519382220773.0229
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382