MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: NOG79891
Description: ABC transporter membrane-spanning permease - amino acid transport

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The abundance of NOG79891 across gut microbiome samples:





The prevalence of NOG79891 across gut microbiome samples:





Association of NOG79891 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.0001342875823470.0002062156628410.02975471794051312344.0828
Type II diabetesSweden53920.009128219972880.004172213632650.0838718869208315110.6705
Crohns diseaseSpain17661.22833184387e-050.0001997525556420.1243868440241459048.5104
Type II diabetesDenmark752770.001644305985950.001806575365970.1916081649561275841.8199
Type II diabetesChina1831850.0003128755510520.00036282506150.2311513425261424947.0901
Rheumatoid arthritisChina127980.0003905355537150.0001919755564920.3078570869411236341.2279
Ulcerative colitisSpain78660.001534660663570.0001997525556420.3171448640211429647.1597
Colorectal cancerAustria64350.01174422265360.008431701404330.5511940296351949765.9663
ObesityDenmark1691230.001951242515670.001581770687440.6103443102172188171.9509
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382