MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: NOG82342
Description: ABC transporter, ATP-binding protein-related protein

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The abundance of NOG82342 across gut microbiome samples:





The prevalence of NOG82342 across gut microbiome samples:





Association of NOG82342 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesChina1831850.0554236556470.04166437544890.00052886148253513374.41852
Liver cirrhosisChina1201140.04070803186780.04807069753870.009754346378041078036.2122
Colorectal cancerAustria64350.02898359669460.0218297904590.111398862226546318.4819
Type II diabetesSweden53920.03176917287060.04120987869850.204628047054700323.7132
ObesityDenmark1691230.05927864249970.05363972217170.2127975511641144837.6443
Crohns diseaseSpain17660.06380987637440.04865683610230.3234805859952015667.0175
Rheumatoid arthritisChina127980.03860360862550.03658695482770.3930623350521460548.7028
Ulcerative colitisSpain78660.05299451451230.04865683610230.4508123434561795459.2251
Type II diabetesDenmark752770.06321976726870.05717926971110.9202525980322898695.0126
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382