MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: actNOG02192
Description: ABC transporter protein

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The abundance of actNOG02192 across gut microbiome samples:





The prevalence of actNOG02192 across gut microbiome samples:





Association of actNOG02192 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Ulcerative colitisSpain78660.0002946801677820.0001079625247010.0997769556267702023.1576
Type II diabetesSweden53920.0002265999725452.17460254088e-050.123993926363441214.939
Colorectal cancerAustria64359.44739061879e-052.47621147927e-050.211189141314927731.3879
Rheumatoid arthritisChina127982.27507873893e-061.63099441347e-050.263975437261097136.5859
Type II diabetesChina1831853.84702365236e-060.00.2966223919521611053.2387
ObesityDenmark1691231.63827925917e-054.37672693347e-050.3818472675431644754.0824
Type II diabetesDenmark752771.35931597712e-052.77015322623e-050.3982228410551815159.4962
Crohns diseaseSpain17667.97520716493e-050.0001079625247010.9563134627632946297.9618
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382