MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG00052
Description: ABC transporter, ATP-binding protein

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The abundance of bactNOG00052 across gut microbiome samples:





The prevalence of bactNOG00052 across gut microbiome samples:





Association of bactNOG00052 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesDenmark752772.86093067067e-050.00011449703010.0685430871357828027.1413
Crohns diseaseSpain17662.27775291184e-059.28874889558e-050.1113421961011411046.916
ObesityDenmark1691230.0001454123759696.89028646128e-050.119471769672813326.7436
Ulcerative colitisSpain78660.000105669309569.28874889558e-050.5457470495462025566.8173
Type II diabetesChina1831852.4868750188e-067.96395674902e-060.6176380884362323676.7887
Liver cirrhosisChina1201147.82854774076e-067.90953523839e-060.6733124857192641888.7416
Type II diabetesSweden53920.0001827858153170.0002206804384540.7943838620852410581.6289
Colorectal cancerAustria64350.0001472541871410.0001925246324390.857788295372622288.7197
Rheumatoid arthritisChina127980.000132278267911.28585723323e-050.9163528106842801293.4121
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382