MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG00221
Description: ABC transporter protein

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The abundance of bactNOG00221 across gut microbiome samples:





The prevalence of bactNOG00221 across gut microbiome samples:





Association of bactNOG00221 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Crohns diseaseSpain17660.08026930921160.02812671363376.54818286003e-066592.19119
Rheumatoid arthritisChina127980.03094349411430.02905717079990.0949307316556511017.0407
Type II diabetesDenmark752770.0207173582430.02465634614490.1610291736771178438.6272
ObesityDenmark1691230.02635595417220.02198650093310.2927767864631394845.865
Ulcerative colitisSpain78660.02605333006710.02812671363370.5868975147962130770.286
Colorectal cancerAustria64350.006403155310180.00564126610490.6499420810292153972.8752
Liver cirrhosisChina1201140.05741571362090.04795985263280.7322540538142704490.8445
Type II diabetesChina1831850.04469885603090.04604214949050.750480058912578585.2143
Type II diabetesSweden53920.00881359111130.01086077374090.9139873947852723892.2367
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382