MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG00257
Description: ABC transporter protein

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The abundance of bactNOG00257 across gut microbiome samples:





The prevalence of bactNOG00257 across gut microbiome samples:





Association of bactNOG00257 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
ObesityDenmark1691230.002084418814840.00640793667040.0041818277526816455.40923
Ulcerative colitisSpain78660.001468309115250.0005446629387590.0071847761376315435.09006
Type II diabetesChina1831850.0001082127753525.17021283756e-050.0594659493228752524.867
Crohns diseaseSpain17664.52199839107e-050.0005446629387590.07679923227591290342.9011
Colorectal cancerAustria64350.0003187953648190.0001448407930830.4592663130521653055.9277
Type II diabetesDenmark752770.0009270803701660.003869585114030.4935120895882035566.7224
Type II diabetesSweden53920.000379616924950.00062547655090.6162113725171928665.3082
Liver cirrhosisChina1201143.51664185354e-062.02915796667e-050.6790750013452649589.002
Rheumatoid arthritisChina127980.0001692696559634.23202071089e-050.6912249367522208573.6486
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382