MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG00270
Description: ABC transporter ATP-binding protein

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The abundance of bactNOG00270 across gut microbiome samples:





The prevalence of bactNOG00270 across gut microbiome samples:





Association of bactNOG00270 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesChina1831850.01634480956250.01094898068950.00043490849512612424.10456
Type II diabetesSweden53920.005702438285880.00986114531630.00122605192993510.172706
Crohns diseaseSpain17660.02556333640320.008448949687520.02818548982151011033.616
Rheumatoid arthritisChina127980.01032439432640.00859883779910.0728310427677416613.8927
Colorectal cancerAustria64350.008472114438520.006067956916690.0888067905755453615.3471
Type II diabetesDenmark752770.01259948610250.01075859553050.0950684045496947131.0453
Liver cirrhosisChina1201140.01571163087520.01275887484910.2297727331641984566.6633
Ulcerative colitisSpain78660.008188580752820.008448949687520.4888842602761884462.1627
ObesityDenmark1691230.01015261579390.01153634357850.8051711163442646887.0343
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382