MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG01713
Description: ABC transporter protein

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The abundance of bactNOG01713 across gut microbiome samples:





The prevalence of bactNOG01713 across gut microbiome samples:





Association of bactNOG01713 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Crohns diseaseSpain17660.0163127334410.04260125794632.59039191942e-07980.32419
Ulcerative colitisSpain78660.05512415195710.04260125794630.001172186338386462.13103
ObesityDenmark1691230.03558663687290.04198523795420.015718871236229029.5426
Type II diabetesChina1831850.03989502395760.03366252260180.3275383584341699956.1783
Type II diabetesSweden53920.06409496013660.06525909549330.3618763494041203740.7619
Type II diabetesDenmark752770.03528751164050.03832150875090.4115271344061847960.5713
Colorectal cancerAustria64350.05704916405380.05281099724980.5855580926592021868.4057
Liver cirrhosisChina1201140.05011557509070.03996895491710.7442962477532715891.2291
Rheumatoid arthritisChina127980.03943591444720.04138953009220.920204680452810093.7056
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382