MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG01823
Description: ABC transporter protein

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The abundance of bactNOG01823 across gut microbiome samples:





The prevalence of bactNOG01823 across gut microbiome samples:





Association of bactNOG01823 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.003328986828560.006240068341231.70044148495e-05388213.0404
Rheumatoid arthritisChina127980.005949755424240.004772149401120.0540298768844339211.3116
Crohns diseaseSpain17660.002653383883710.003861007405050.07913392715611299143.1953
Ulcerative colitisSpain78660.003830276721590.003861007405050.0968855348185691722.8162
Type II diabetesChina1831850.006230301382290.004068374760510.1181021239151028433.9866
ObesityDenmark1691230.006083787747250.005192122233180.1726035566371007733.136
Type II diabetesSweden53920.002102167753790.003107434315330.218774095839770726.0989
Colorectal cancerAustria64350.002274552994660.001372947514030.406914877931518451.3737
Type II diabetesDenmark752770.005123400230950.005739746694230.8662370527562786491.3364
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382