MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG02497
Description: ABC transporter, permease

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The abundance of bactNOG02497 across gut microbiome samples:





The prevalence of bactNOG02497 across gut microbiome samples:





Association of bactNOG02497 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Ulcerative colitisSpain78660.00.0001759890314910.0040259261066911603.82661
ObesityDenmark1691231.71755061274e-050.00.0610788248634553918.2138
Crohns diseaseSpain17660.00.0001759890314910.1671881177321597653.1189
Rheumatoid arthritisChina127980.002311120472550.0004470114501820.170956573558783826.138
Type II diabetesDenmark752770.01.01780777051e-050.2371176223221406146.0911
Liver cirrhosisChina1201140.0002981519269630.0002676518055710.2380401281531999067.1504
Type II diabetesSweden53921.4998416494e-050.0001176695252820.270145343863906830.7078
Colorectal cancerAustria64350.0001031950014290.00.4725223268931722258.269
Type II diabetesChina1831850.000188837381020.0001942450869310.9292245381032903895.9632
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382